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1.
J Am Chem Soc ; 141(34): 13442-13453, 2019 08 28.
Article in English | MEDLINE | ID: mdl-31373799

ABSTRACT

O-Linked α-N-acetylgalactosamine (O-GalNAc) glycans constitute a major part of the human glycome. They are difficult to study because of the complex interplay of 20 distinct glycosyltransferase isoenzymes that initiate this form of glycosylation, the polypeptide N-acetylgalactosaminyltransferases (GalNAc-Ts). Despite proven disease relevance, correlating the activity of individual GalNAc-Ts with biological function remains challenging due to a lack of tools to probe their substrate specificity in a complex biological environment. Here, we develop a "bump-hole" chemical reporter system for studying GalNAc-T activity in vitro. Individual GalNAc-Ts were rationally engineered to contain an enlarged active site (hole) and probed with a newly synthesized collection of 20 (bumped) uridine diphosphate N-acetylgalactosamine (UDP-GalNAc) analogs to identify enzyme-substrate pairs that retain peptide specificities but are otherwise completely orthogonal to native enzyme-substrate pairs. The approach was applicable to multiple GalNAc-T isoenzymes, including GalNAc-T1 and -T2 that prefer nonglycosylated peptide substrates and GalNAcT-10 that prefers a preglycosylated peptide substrate. A detailed investigation of enzyme kinetics and specificities revealed the robustness of the approach to faithfully report on GalNAc-T activity and paves the way for studying substrate specificities in living systems.


Subject(s)
Acetylgalactosamine/metabolism , N-Acetylgalactosaminyltransferases/metabolism , Protein Engineering , Uridine Diphosphate/metabolism , Acetylgalactosamine/chemistry , Amino Acid Sequence , Catalytic Domain , Humans , Isoenzymes/chemistry , Isoenzymes/genetics , Isoenzymes/metabolism , Kinetics , Models, Molecular , Mutagenesis , N-Acetylgalactosaminyltransferases/chemistry , N-Acetylgalactosaminyltransferases/genetics , Substrate Specificity , Uridine Diphosphate/chemistry , Polypeptide N-acetylgalactosaminyltransferase
2.
ACS Chem Biol ; 14(4): 775-783, 2019 04 19.
Article in English | MEDLINE | ID: mdl-30807095

ABSTRACT

Cell-based therapy is a promising approach to restoring lost functions to compromised organs. However, the issue of inefficient cell engraftment remains to be resolved. Herein, we take a chemical approach to facilitate cell engraftment by using self-assembling molecules which modify two cellular traits: cell survival and invasiveness. In this system, the self-assembling molecule induces syndecan-4 clusters on the cellular surface, leading to enhanced cell viability. Further integration with Halo-tag technology provided this self-assembly structure with matrix metalloproteinase-2 to functionalize cells with cell-invasion activity. In vivo experiments showed that the pretreated cells were able to survive injection and then penetrate and engraft into the host tissue, demonstrating that the system enhances cell engraftment. Therefore, cell-surface modification via an alliance between self-assembling molecules and ligation technologies may prove to be a promising method for cell engraftment.


Subject(s)
Cell Transplantation , Matrix Metalloproteinase 2 , Syndecans , Animals , Cell Membrane/metabolism , Cell Movement , Cell Survival , Matrix Metalloproteinase 2/chemistry , Matrix Metalloproteinase 2/metabolism , Mice , Protein Multimerization , Syndecans/chemistry , Syndecans/metabolism
3.
Cell Chem Biol ; 24(2): 207-217, 2017 Feb 16.
Article in English | MEDLINE | ID: mdl-28132894

ABSTRACT

Sterol regulatory element-binding proteins (SREBPs) are transcription factors that control lipid homeostasis. SREBP activation is regulated by a negative feedback loop in which sterols bind to SREBP cleavage-activating protein (SCAP), an escort protein essential for SREBP activation, or to insulin-induced genes (Insigs) (endoplasmic reticulum [ER] anchor proteins), sequestering the SREBP-SCAP-Insig complex in the ER. We screened a chemical library of endogenous molecules and identified 25-hydroxyvitamin D (25OHD) as an inhibitor of SREBP activation. Unlike sterols and other SREBP inhibitors, 25OHD impairs SREBP activation by inducing proteolytic processing and ubiquitin-mediated degradation of SCAP, thereby decreasing SREBP levels independently of the vitamin D receptor. Vitamin D supplementation has been proposed to reduce the risk of metabolic diseases, but the mechanisms are unknown. The present results suggest a previously unrecognized molecular mechanism of vitamin D-mediated lipid control that might be useful in the treatment of metabolic diseases.


Subject(s)
Intracellular Signaling Peptides and Proteins/antagonists & inhibitors , Lipid Metabolism/drug effects , Membrane Proteins/antagonists & inhibitors , Sterol Regulatory Element Binding Proteins/antagonists & inhibitors , Vitamin D/analogs & derivatives , Animals , CHO Cells , Cells, Cultured , Cricetulus , Dose-Response Relationship, Drug , Down-Regulation/drug effects , HEK293 Cells , Humans , Intracellular Signaling Peptides and Proteins/genetics , Intracellular Signaling Peptides and Proteins/metabolism , Membrane Proteins/genetics , Membrane Proteins/metabolism , Molecular Conformation , RNA, Messenger/drug effects , RNA, Messenger/genetics , RNA, Messenger/metabolism , Sterol Regulatory Element Binding Proteins/genetics , Sterol Regulatory Element Binding Proteins/metabolism , Structure-Activity Relationship , Vitamin D/chemistry , Vitamin D/metabolism , Vitamin D/pharmacology
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