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2.
Cell Mol Life Sci ; 63(10): 1149-64, 2006 May.
Article in English | MEDLINE | ID: mdl-16568239

ABSTRACT

G protein-coupled receptors (GPCRS) represent a class of integral membrane proteins involved in many biological processes and pathologies. Fifty percent of all modern drugs and almost 25% of the top 200 bestselling drugs are estimated to target GPCRs. Despite these crucial biological implications, very little is known, at atomic resolution, about the detailed molecular mechanisms by which these membrane proteins are able to recognize their extra-cellular stimuli and transmit the associated messages. Obviously, our understanding of GPCR functioning would be greatly facilitated by the availability of high-resolution three-dimensional (3D) structural data. However, expression, solubilization and purification of these membrane proteins are not easy to achieve, and at present, only one 3D structure has been determined, that of bovine rhodopsin. This review presents and compares the different successful strategies which have been applied to solubilize and purify recombinant GPCRs in the perspective of structural biology experiments.


Subject(s)
Detergents/chemistry , Protein Renaturation , Receptors, G-Protein-Coupled/chemistry , Receptors, G-Protein-Coupled/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Animals , Chromatography , Humans , Receptors, G-Protein-Coupled/drug effects , Recombinant Proteins/drug effects , Solubility
3.
Cell Mol Life Sci ; 60(8): 1529-46, 2003 Aug.
Article in English | MEDLINE | ID: mdl-14513829

ABSTRACT

G-protein-coupled receptors (GPCRs) are of prime importance for cell signal transduction mechanisms and are the target of many current and potential drugs. However, structural data on these membrane proteins is still scarce because of their low natural abundance and the low efficiency of most of the expression systems currently available. This review presents the most important expression systems currently employed for heterologous expression of GPCRs; Escherichia coli, yeast, insect cells and mammalian cells. After briefly recalling the specificity, advantages and limitations of each system, particular emphasis is put on the quantitative comparison of these expression systems in terms of overall expression yield, and on the influence of various factors (primary sequence, origin, cell type, N- and C-terminal tags) on the results.


Subject(s)
GTP-Binding Proteins/metabolism , Gene Expression , Receptors, Cell Surface/biosynthesis , Receptors, Cell Surface/genetics , Animals , Baculoviridae/genetics , Cell Line , Escherichia coli/genetics , Humans , Mammals , Pichia/genetics , Receptors, Cell Surface/isolation & purification , Recombinant Proteins/biosynthesis , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Saccharomyces cerevisiae/genetics , Schizosaccharomyces/genetics , Spodoptera/genetics
4.
J Biomol NMR ; 14(3): 231-9, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10481275

ABSTRACT

Methylotrophic yeast has previously been shown to be an excellent system for the cost-effective production of perdeuterated biomass and for the heterologous expression of membrane receptors. A protocol for the expression of 85% deuterated, functional human mu-opiate receptor was established. For partially deuterated biomass, deuteration level and distribution were determined for fatty acids, amino acids and carbohydrates. It was shown that prior to biosynthesis of lipids and amino acids (and of carbohydrates, to a lower extent), exchange occurs between water and methanol hydrogen atoms, so that 80%-90% randomly deuterated biomass and over-expressed proteins may be obtained using only deuterated water.


Subject(s)
Deuterium , Isotope Labeling/methods , Methanol/metabolism , Pichia/metabolism , Receptors, Opioid, mu/isolation & purification , Biomass , Gas Chromatography-Mass Spectrometry , Humans , Nuclear Magnetic Resonance, Biomolecular , Pichia/genetics , Receptors, Opioid, mu/genetics , Recombinant Proteins/isolation & purification
5.
FEBS Lett ; 394(3): 268-72, 1996 Oct 07.
Article in English | MEDLINE | ID: mdl-8830656

ABSTRACT

The human mu-opioid receptor cDNA from which the 32 amino-terminal codons were substituted by the Saccharomyces cerevisiae alpha-mating factor signal sequence has been expressed in the methylotrophic yeast Pichia pastoris using the host promoter of the alcohol oxidase-1 gene. Cell membranes exhibited specific and saturable binding of the opioid antagonist [3H]diprenorphine (Kd = 0.2 nM and Bmax = 400 fmol/mg protein or 800 sites/cell). Competition studies with non-selective, and mu-, delta- and kappa-selective opioid agonists and antagonists revealed a typical mu-opioid receptor binding profile, suggesting proper folding of the protein in yeast membranes.


Subject(s)
Receptors, Opioid, mu/genetics , Receptors, Opioid, mu/metabolism , Cell Membrane , Diprenorphine/metabolism , Dose-Response Relationship, Drug , Gene Expression , Humans , Narcotic Antagonists/metabolism , Narcotics/metabolism , Pichia/genetics , Receptors, Opioid, mu/agonists , Receptors, Opioid, mu/antagonists & inhibitors , Recombinant Fusion Proteins/metabolism
6.
Carbohydr Res ; 289: 115-36, 1996 Aug 19.
Article in English | MEDLINE | ID: mdl-8805777

ABSTRACT

Nod factors are secreted lipo-oligosaccharides produced by symbiotic nitrogen-fixing Rhizobium bacteria that induce nodule formation on the roots of host leguminous plants. Two biologically active fractions (NodNGRA and NodNGRB) were isolated by reversed-phase HPLC from the culture supernatant of a Nod factor overproducing strain of Rhizobium sp. NGR234. NodNGRA and NodNGRB are heterogeneous mixtures of N-acylated 2-O-methylfucosylated chitomers, in which the fucosyl residue may be either 3-sulfated (NodNGRA), or 4-O-acetylated or nonsubstituted (NodNGRB). Structurally analogous series of compounds occur with either N-vaccenic (C18:1) or N-palmitic (C16:0) substituents. The presence of 6-O-carbamoyl groups on the GlcNMe-Acyl residue occurs on some molecules, while others are di-O-carbamoylated. Detailed structural analysis of seventeen Nod factors are reported here.


Subject(s)
Lipopolysaccharides/chemistry , Rhizobium/metabolism , Carbohydrate Sequence , Chamomile , Fabaceae/metabolism , Flavonoids/pharmacology , Gas Chromatography-Mass Spectrometry , Lipids/analysis , Lipids/chemistry , Magnetic Resonance Spectroscopy , Molecular Sequence Data , Molecular Structure , Monosaccharides/analysis , Monosaccharides/chemistry , Oils, Volatile/pharmacology , Oligosaccharides/chemistry , Plants, Medicinal , Spectrometry, Mass, Fast Atom Bombardment , Trifluoroacetic Acid/metabolism
7.
J Biol Chem ; 270(39): 22968-73, 1995 Sep 29.
Article in English | MEDLINE | ID: mdl-7559434

ABSTRACT

Although Rhizobium sp. NGR234 and Rhizobium fredii USDA257 share many traits, dysfunctional nodSU genes in the latter prohibit nodulation of Leucaena species. Accordingly, we used R. fredii transconjugants harboring the nodS and nodU genes of NGR234 to study their role in the structural modification of the lipo-oligosaccharide Nod factors. Differences between the Nod factors mainly concern the length of the oligomer (three to five glucosamine residues in USDA257 and five residues only in NGR234) and the presence of additional substituents in NGR234 (N-linked methyl, one or two carbamoyl groups on the non-reducing moiety, acetyl or sulfate groups on the fucose). R. fredii(nodS) transconjugants produce chitopentamer Nod factors with a N-linked methyl group on the glucosaminyl terminus. Introduction of nodU into USDA257 results in the formation of 6-O-carbamoylated factors. Co-transfer of nodSU directs N-methylation, mono-6-O-carbamoylation, and production of pentameric Nod factors. Mutation of nodU in NGR234 suppresses the formation of bis-carbamoylated species. Insertional mutagenesis of nodSU drastically decreases Nod factor production, but with the exception of sulfated factors (which are partially N-methylated and mono-carbamoylated), they are identical to those of the wild-type strain. Thus, Nod factor levels, their degree of oligomerization, and N-methylation are linked to the activity encoded by nodS.


Subject(s)
Bacterial Proteins/metabolism , Carboxyl and Carbamoyl Transferases , Genes, Bacterial , Lipopolysaccharides/biosynthesis , Methyltransferases/metabolism , Rhizobium/genetics , Rhizobium/metabolism , Bacterial Proteins/biosynthesis , Bacterial Proteins/isolation & purification , Carbohydrate Sequence , Cells, Cultured , Conjugation, Genetic , Fabaceae/microbiology , Glucosamine/analysis , Glucosamine/metabolism , Lipopolysaccharides/chemistry , Solanum lycopersicum , Methylation , Methyltransferases/biosynthesis , Methyltransferases/isolation & purification , Molecular Sequence Data , Plants, Medicinal , Plasmids , Promoter Regions, Genetic , Recombinant Proteins/biosynthesis , Recombinant Proteins/metabolism , Restriction Mapping , Symbiosis
8.
Appl Environ Microbiol ; 60(11): 4134-41, 1994 Nov.
Article in English | MEDLINE | ID: mdl-16349441

ABSTRACT

The heterotrophic and mesophilic marine bacterium HYD-1545 was isolated on a metal-amended medium from the dorsal integument of the hydrothermal vent polychaete Alvinella pompejana. This strain, which can be assigned to the genus Alteromonas on the basis of its G+C content and phenotypical features, produced large amounts of an acidic polysaccharide in batch cultures. The polysaccharide was excreted during the stationary phase of growth and contained glucose, galactose, glucuronic acid, galacturonic acid, and 4,6-O-(1-carboxyethilidene)-galactose as major components. This polysaccharide was a polyelectrolyte, and the viscosity of its solutions depended on the ionic strength. The decrease in viscosity with increasing NaCl concentrations and the effect of Ca in decreasing the viscosity at low Ca concentrations support a model in which the polysaccharide carries anionic groups. However, an unusual behavior was observed at higher concentrations and could be related to intermolecular interactions involving Ca ions.

9.
Mol Plant Microbe Interact ; 6(6): 764-74, 1993.
Article in English | MEDLINE | ID: mdl-8118058

ABSTRACT

The broad host range of Rhizobium sp. NGR234 is based mainly on its ability to secrete a family of lipooligosaccharide Nod factors. To monitor Nod-factor purification, we used the small seeded legume Macroptilium atropurpureum, which responds evenly and consistently to Nod factors. At concentrations between approximately equal to 10(-11) M and 10(-9) M, this response takes the form of deformation of the root hairs. Higher concentrations (approximately equal to 10(-9) to 10(-7) M), provoked profound "shepherd's crook" type curling of the root hairs. Similar concentrations of Nod factors of Bradyrhizobium japonicum, Rhizobium leguminosarum, and R. meliloti also provoked marked curling of the root hairs, but the latter two species are unable to nodulate Macroptilium. On the other hand, plant hormones, hormone-like substances, inhibitors of hormone action, as well as substituents of Nod factors were without effect in this bioassay. We thus conclude that only Nod factors are capable of inducing shepherd's crook type curling of Macroptilium root hairs. Perturbations in the auxin-cytokinin balance induced "pseudo" nodulation on M. atropurpureum, as did NodNGR factors at concentrations between 10(-7) and 10(-6) M. Concomitant inoculation of Macroptilium with a NodABC- mutant of NGR234 and sulfated NodNGR factors (NodNGR[S]) gave rise to plants that slowly greened, showing that the NodNGR factors permitted entry of the Nod- mutant into the roots.


Subject(s)
Bacterial Proteins/physiology , Fabaceae/microbiology , Lipopolysaccharides/metabolism , Plants, Medicinal , Rhizobium/physiology , Biological Assay , Biological Transport , Carbohydrate Sequence , Cytokinins/physiology , Indoleacetic Acids/metabolism , Lipopolysaccharides/chemistry , Molecular Sequence Data , Mutation
10.
Mol Microbiol ; 6(23): 3575-84, 1992 Dec.
Article in English | MEDLINE | ID: mdl-1474899

ABSTRACT

Rhizobium species strain NGR234 is the most promiscuous known rhizobium. In addition to the non-legume Parasponia andersonii, it nodulates at least 70 genera of legumes. Here we show that the nodulation genes of this bacterium determine the production of a large family of Nod-factors which are N-acylated chitin pentamers carrying a variety of substituents. The terminal non-reducing glucosamine is N-acylated with vaccenic or palmitic acids, is N-methylated, and carries varying numbers of carbamoyl groups. The reducing N-acetyl-glucosamine residue is substituted on position 6 with 2-O-methyl-L-fucose which may be acetylated or sulphated or non-substituted. All three internal residues are N-acetylated. At pico- to nanomolar concentrations, these signal molecules exhibit biological activities on the tropical legumes Macroptilium and Vigna (Phaseoleae), as well as on both the temperate genera Medicago (Trifoliae) and Vicia (Viciae). These data strongly suggest that the uniquely broad host range of NGR234 is mediated by the synthesis of a family of varied sulphated and non-sulphated lipo-oligosaccharide signals.


Subject(s)
Lipopolysaccharides/metabolism , Rhizobium/metabolism , Symbiosis , Acetylation , Carbohydrate Sequence , Chromatography, High Pressure Liquid , Cloning, Molecular , Genes, Bacterial , Lipopolysaccharides/chemistry , Mass Spectrometry , Molecular Sequence Data , Molecular Structure , Plasmids , Restriction Mapping , Rhizobium/genetics , Sulfates
11.
Anal Biochem ; 199(2): 154-61, 1991 Dec.
Article in English | MEDLINE | ID: mdl-1812780

ABSTRACT

The mass spectra of permethylated methyl 4,6-O-(1-carbomethoxyethylidene)-D-hexopyranoside and 1,5-anhydro-D-hexitol of glucose, galactose, and mannose and permethylated methyl 5,6-O-(1-carbomethoxyethylidene)-D-galactofuranoside and 1,4-anhydro-D-galactitol have been determined. The stability of each compound toward methanolysis and reductive cleavage is discussed. These techniques permit the identification of the acetalic linkages of pyruvic acid present in polysaccharides.


Subject(s)
Bacillus/chemistry , Klebsiella pneumoniae/chemistry , Polysaccharides, Bacterial/chemistry , Pyruvates/analysis , Acetylation , Carbohydrate Sequence , Galactose/chemistry , Glucose/chemistry , Mannose/chemistry , Mass Spectrometry , Methanol , Methylation , Molecular Sequence Data , Oxidation-Reduction , Sugar Alcohols/chemistry
12.
FEBS Lett ; 281(1-2): 55-8, 1991 Apr 09.
Article in English | MEDLINE | ID: mdl-2015909

ABSTRACT

The tube of Alvinella pompejana contains in its carbohydrate fraction, 3 methylated monosaccharides: 2-mono-O-methyl-L-fucose, 3-mono-O-methyl-L-fucose and 2,4-di-O-methyl-L-fucose. The present work appears to be the first report of the occurrence of 2-mono-O-methyl-L-fucose and 3-mono-O-methyl-L-fucose in the animal kingdom. Moreover, it is the first time that 2,4-di-O-methyl-L-fucose is found in nature.


Subject(s)
Annelida/analysis , Fucose/analogs & derivatives , Fucose/isolation & purification , Animals , Chromatography, Gas , Mass Spectrometry , Methylation
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