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3.
Case Rep Oncol Med ; 2016: 8515218, 2016.
Article in English | MEDLINE | ID: mdl-27525143

ABSTRACT

Background. Non-AIDS-defining cancers represent a rising health issue among HIV-infected patients. Nevertheless, HIV testing is not systematic during the initial cancer staging. Here, we report a case of HIV infection diagnosed three years after chemotherapy initiation for multiple myeloma. Results. A 57-year-old woman diagnosed with multiple myeloma underwent a first round of chemotherapy by bortezomib/lenalidomide and then with bortezomib/liposomal-doxorubicine/dexamethasone, with partial remission, poor hematological tolerance, and multiple episodes of pneumococcal infection. Allogenic stem cell transplantation was proposed leading to HIV testing, which revealed seropositivity, with an HIV viral load of 5.5 Log10/mL and severe CD4 T cell depletion (24 cells/mm(3)). Chemotherapy by bendamustin was initiated. Multidisciplinary staff decided the initiation of antiretroviral therapy with tenofovir/emtricitabin/efavirenz and prophylaxis against opportunistic infections. After 34 months, patient achieved complete remission, sustained HIV suppression, and significant CD4 recovery (450 cells/mm(3)), allowing effective pneumococcal immunization without relapse. Conclusion. Our case illustrates the drawback that ignored HIV infection is still causing to cancer patients receiving chemotherapy and highlights the importance of early HIV testing in oncology. A multidisciplinary approach including oncologists/hematologists, virologists, and pharmacists is recommended in order to avoid drug interactions between chemotherapy and antiretroviral drugs. Moreover, prophylactic medication is recommended in these patients regardless of CD4+ cell count at the initiation of chemotherapy.

4.
Clin Microbiol Infect ; 22(4): 299-311, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26794031

ABSTRACT

Several lines of evidence indicate that HIV infection can result in several possible incomes, including a very small proportion of individuals whose HIV replication is controlled after treatment interruption (known as HIV posttreatment controllers) or spontaneously without any treatment (known as HIV elite controllers). Both types of individuals are HIV RNA negative but HIV DNA positive, with living virus which can be stimulated ex vivo. A review was conducted to assess the literature on yet rarer cases with detectable integrated HIV DNA without HIV infectious virus in HIV-seropositive or -negative individuals. Three categories of patients were identified: (a) HIV-seropositive individuals with apparent spontaneous cure from their HIV infection, (b) HIV-seronegative children born to HIV-infected mothers and (c) highly exposed seronegative adults. Validity criteria were proposed to assess the presence of integrated HIV DNA as possible or unquestionable in these three categories. Only three articles among the 22 ultimately selected fulfilled these criteria. Among the highly exposed seronegative subjects, some individuals were described as being without integrated HIV DNA, probably because these subjects were not investigated using relevant, highly sensitive methods. Finally, we propose a definition of spontaneous cure of HIV infection based on clinical, immunologic and virologic criteria.


Subject(s)
DNA, Viral/blood , HIV Antibodies/blood , HIV Infections/immunology , HIV Infections/virology , HIV Long-Term Survivors , Humans
5.
Clin Microbiol Infect ; 20(12): 1280-8, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25366539

ABSTRACT

The long-term spontaneous evolution of humans and the human immunodeficiency virus (HIV) is not well characterized; many vertebrate species, including humans, exhibit remnants of other retroviruses in their genomes that question such possible endogenization of HIV. We investigated two HIV-infected patients with no HIV-related disease and no detection with routine tests of plasma HIV RNA or cell-associated HIV DNA. We used Sanger and deep sequencing to retrieve HIV DNA sequences integrated in the human genome and tested the host humoral and cellular immune responses. We noticed that viruses from both patients were inactivated by the high prevalence of the transformation of tryptophan codons into stop codons (25% overall (3-100% per gene) and 24% overall (0-50% per gene)). In contrast, the humoral and/or cellular responses were strong for one patient and moderate for the other, indicating that a productive infection occurred at one stage of the infection. We speculate that the stimulation of APOBEC, the enzyme group that exchanges G for A in viral nucleic acids and is usually inhibited by the HIV protein Vif, has been amplified and made effective from the initial stage of the infection. Furthermore, we propose that a cure for HIV may occur through HIV endogenization in humans, as observed for many other retroviruses in mammals, rather than clearance of all traces of HIV from human cells, which defines viral eradication.


Subject(s)
DNA, Viral/genetics , Endogenous Retroviruses/genetics , HIV Infections/virology , HIV/genetics , Proviruses/genetics , Codon, Nonsense , Codon, Terminator , Cohort Studies , Endogenous Retroviruses/isolation & purification , HIV/isolation & purification , Humans , Male , Middle Aged , Proviruses/isolation & purification , Sequence Analysis, DNA , Young Adult
7.
Int J Cancer ; 133(11): 2681-7, 2013 Dec 01.
Article in English | MEDLINE | ID: mdl-23712523

ABSTRACT

Today in France, low attendance to cervical screening by Papanicolaou cytology (Pap-smear) is a major contributor to the 3,000 new cervical cancer cases and 1,000 deaths that occur from this disease every year. Nonattenders are mostly from lower socioeconomic groups and testing of self-obtained samples for high-risk Human Papilloma virus (HPV) types has been proposed as a method to increase screening participation in these groups. In 2011, we conducted a randomized study of women aged 35-69 from very low-income populations around Marseille who had not responded to an initial invitation for a free Pap-smear. After randomization, one group received a second invitation for a free Pap-smear and the other group was offered a free self-sampling kit for HPV testing. Participation rates were significantly different between the two groups with only 2.0% of women attending for a Pap-smear while 18.3% of women returned a self-sample for HPV testing (p ≤ 0.001). The detection rate of high-grade lesions (≥CIN2) was 0.2‰ in the Pap-smear group and 1.25‰ in the self-sampling group (p = 0.01). Offering self-sampling increased participation rates while the use of HPV testing increased the detection of cervical lesions (≥CIN2) in comparison to the group of women receiving a second invitation for a Pap-smear. However, low compliance to follow-up in the self-sampling group reduces the effectiveness of this screening approach in nonattenders women and must be carefully managed.


Subject(s)
Mass Screening , Papanicolaou Test , Uterine Cervical Neoplasms/epidemiology , Adult , Female , France , Humans , Papillomaviridae/isolation & purification , Papillomaviridae/pathogenicity , Papillomavirus Infections/diagnosis , Papillomavirus Infections/epidemiology , Poverty , Pregnancy , Self Care , Specimen Handling , Uterine Cervical Neoplasms/diagnosis , Uterine Cervical Neoplasms/pathology , Uterine Cervical Neoplasms/virology
8.
Euro Surveill ; 18(7): 4, 2013 Feb 14.
Article in English | MEDLINE | ID: mdl-23449184

ABSTRACT

Real-time systematic monitoring of the number of infections diagnosed in our clinical microbiology laboratory in Marseille recently drew attention to the fact that the incidence of gonorrhoea was 10-fold greater from September through December 2012 than during same months of previous years. We also found an increase in the annual incidence of syphilis and human immunodeficiency virus seroconversion. Our system allowed timely identification of an increase in sexually-transmitted infections in Marseille for the whole year of 2012.


Subject(s)
Gonorrhea/epidemiology , HIV Infections/epidemiology , Syphilis/epidemiology , Adolescent , Adult , Age Distribution , Aged , Aged, 80 and over , Clinical Laboratory Techniques , Disease Notification , Female , France/epidemiology , Gonorrhea/diagnosis , HIV Infections/diagnosis , Hospitals, University , Humans , Incidence , Male , Middle Aged , Population Surveillance , Sex Distribution , Sexually Transmitted Diseases/diagnosis , Sexually Transmitted Diseases/epidemiology , Syphilis/diagnosis , Time Factors , Urban Population , Young Adult
9.
Clin Microbiol Infect ; 19(1): E44-E50, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23137168

ABSTRACT

In France, about 40% of women aged 25-65 years do not participate in regular screening and thus are at high risk (HR) of cervical cancer. Human papillomavirus (HPV) vaginal self-sampling is a valuable alternative in this population. This study aimed to assess the prevalence of HR and LR (low-risk) HPV infection in 3767 women aged >35 years from mid-socioeconomic backgrounds who carried out HPV vaginal self-sampling at home. HPV vaginal self-sampling was better accepted than the Pap-test in women aged 35-69 years who were previously non-responders to individual invitation. From the 933 self-collected swabs studied (24.7%), 62 were HPV-infected (6.6%), and 73 HPV types were found. HPV 16 was the most frequently found (43.5%), followed by 53 (23.2%), 18 (12.3%), 66 (12.3%), 31 (6.8%), 33 (5.4%) and 58 (2.7%). Ten women (16.2%) were infected by multiple HR-HPV types. Median HPV 16 load was 104.000 copies/10(6) cells and median HPV 18 load was 833 copies/10(6) cells. Six women (9.3%) harboured LR-HPV types. The 12-month follow-up of 43 HR-HPV positive women (69.3%) revealed CIN2-3 lesions in three women (6.9%), all HPV 16 infected, and harbouring an HPV 16 load >5 log(10) copies/10(6) cells. Women harbouring HR-HPV types other than HPV 16/18 were older than women harbouring HPV 16/18 types (55 years vs. 46.9 years, p 0.0008). The high frequency of HR-HPV types in women >50 years deserves further investigation to elucidate the mechanism involved (re-infection or reactivation).


Subject(s)
Early Detection of Cancer/statistics & numerical data , Papillomavirus Infections/diagnosis , Papillomavirus Infections/virology , Specimen Handling/methods , Vaginal Smears/methods , Adult , Aged , Female , France/epidemiology , Human papillomavirus 16/isolation & purification , Human papillomavirus 18/isolation & purification , Humans , Middle Aged , Papillomavirus Infections/epidemiology , Papillomavirus Infections/pathology , Patient Participation/statistics & numerical data , Prevalence , Risk Assessment , Specimen Handling/statistics & numerical data , Vaginal Smears/statistics & numerical data
10.
Med Mal Infect ; 41(2): 68-79, 2011 Feb.
Article in French | MEDLINE | ID: mdl-20828954

ABSTRACT

Human papillomaviruses (HPV) are the main risk factor for cervical cancer. By introducing its DNA into the genome of infected human cells, the virus expresses two oncoproteins (E6 and E7) that induce inactivation of tumour suppressors and telomerase. HPV infection is extremely common. But most of women will clear the infection over an 8-10-month period without developing any cervical lesion. In fact, it is the persistence of infection that truly exposes to the risk of cervical cancer. HPV testing, used for primary screening, has better sensitivity but lower specificity than cervical cytology. A secondary use of cytology would compensate the loss of HPV testing specificity. Thus, cervical cytology would be performed only in HPV positive women and colposcopy finally performed only in women with abnormal cytology. The characteristics of such screening would allow to increase interscreening intervals and therefore to reduce additional costs. The quantification of HPV viral load could be a way to differentiate significant infections from others. Despite proven significant association between high HPV viral load and the risk of CIN 2-3 and cervical cancer, crude variations within disease grades currently limit the clinical utility of viral load measurement. More than a just measure of HPV viral load, its evolution over time is what would really be of clinical relevance.


Subject(s)
Papillomavirus Infections/diagnosis , Uterine Cervicitis/diagnosis , Viral Load , Alphapapillomavirus/classification , Alphapapillomavirus/genetics , Alphapapillomavirus/isolation & purification , Alphapapillomavirus/pathogenicity , Colposcopy , DNA Probes, HPV , Female , Human Papillomavirus Recombinant Vaccine Quadrivalent, Types 6, 11, 16, 18 , Humans , Mass Screening/methods , Papillomavirus Infections/epidemiology , Papillomavirus Infections/virology , Papillomavirus Vaccines , Polymerase Chain Reaction/methods , Pregnancy , Pregnancy Complications, Infectious/virology , Prevalence , Sensitivity and Specificity , Uterine Cervical Neoplasms/epidemiology , Uterine Cervical Neoplasms/prevention & control , Uterine Cervical Neoplasms/virology , Uterine Cervicitis/epidemiology , Uterine Cervicitis/virology , Vaccination , Vaginal Smears , Virus Latency , Uterine Cervical Dysplasia/epidemiology , Uterine Cervical Dysplasia/prevention & control , Uterine Cervical Dysplasia/virology
12.
J Viral Hepat ; 17(11): 807-15, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20002298

ABSTRACT

We studied clinical outcome and clinico-virological factors associated with hepatitis B virus reactivation (HBV-R) following cancer treatment in hepatitis B virus surface antigen (HBsAg)-negative/anti-hepatitis B core antibodies (anti-HBcAb)-positive patients. Between 11/2003 and 12/2005, HBV-R occurred in 7/84 HBsAg-negative/anti-HBcAb-positive patients treated for haematological or solid cancer. Virological factors including HBV genotype, core promoter, precore, and HBsAg genotypic and amino acid (aa) patterns were studied. Patients presenting with reactivation were men, had an hepatitis B virus surface antibody (HBsAb) titre <100 IU/L and underwent >1 line of chemotherapy (CT) significantly more frequently than controls. All were treated for haematological cancer, 3/7 received haematopoietic stem cell transplantation (HSCT), and 4/7 received rituximab. Using multivariate analysis, receiving >1 line of CT was an independent risk factor for HBV-R. Fatal outcome occurred in 3/7 patients (despite lamivudine therapy in two), whereas 2/4 survivors had an HBsAg seroconversion. HBV-R involved non-A HBV genotypes and core promoter and/or precore HBV mutants in all cases. Mutations known to impair HBsAg antigenicity were detected in HBV DNA from all seven patients. HBV DNA could be retrospectively detected in two patients prior cancer treatment and despite HBsAg negativity. HBV-R is a concern in HBsAg-negative/anti-HBcAb-positive patients undergoing cancer therapy, especially in males presenting with haematological cancer, a low anti-HBsAb titre and more than one chemotherapeutic agent. HBV DNA testing is mandatory to improve diagnosis and management of HBV-R in these patients. The role of specific therapies such as rituximab or HSCT as well as of HBV aa variability deserves further studies.


Subject(s)
Drug-Related Side Effects and Adverse Reactions , Hepatitis B/epidemiology , Neoplasms/complications , Neoplasms/drug therapy , Stem Cell Transplantation/adverse effects , Virus Activation , Aged , Antibodies, Monoclonal, Murine-Derived/adverse effects , Antibodies, Monoclonal, Murine-Derived/therapeutic use , Antineoplastic Agents/adverse effects , Antineoplastic Agents/therapeutic use , DNA, Viral/genetics , Female , Genotype , Hepatitis B/mortality , Hepatitis B Antibodies/blood , Hepatitis B Core Antigens/genetics , Hepatitis B Surface Antigens/blood , Hepatitis B Surface Antigens/genetics , Hepatitis B virus/genetics , Hepatitis B virus/isolation & purification , Humans , Male , Middle Aged , Promoter Regions, Genetic , Rituximab , Treatment Outcome
13.
J Clin Microbiol ; 46(7): 2450-2, 2008 Jul.
Article in English | MEDLINE | ID: mdl-18480231

ABSTRACT

We describe here what is, to the best of our knowledge, the third reported case of severe thrombocytopenia associated with acute hepatitis E virus infection. The patient was a 72-year-old French woman. It seems likely that the cause of the thrombocytopenia was acute hepatitis E virus infection, possibly occurring via an immune mechanism. No complications were noted, in contrast to the two previous reports.


Subject(s)
Hepatitis E virus/isolation & purification , Hepatitis E/complications , Thrombocytopenia , Aged , Female , France , Humans
14.
J Antimicrob Chemother ; 61(6): 1362-8, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18390885

ABSTRACT

BACKGROUND: We developed clinically relevant genotypic scores for resistance to fosamprenavir/ritonavir in HIV-1 protease inhibitor (PI)-experienced patients. METHODS: PI-experienced patients with virological failure receiving fosamprenavir/ritonavir as the sole PI for at least 3 months and with detectable fosamprenavir plasma levels were included. The impact of baseline protease mutations on virological response (VR, i.e. decrease in plasma HIV-1 RNA between baseline and month 3) was analysed using the Mann-Whitney test. Mutations with prevalence >10% and P value <0.10 were retained. The Jonckheere-Terpstra test was used to select the combination of mutations most strongly associated with VR. The association between score and VR was assessed by multivariate backward regression. RESULTS: In the 73 patients included, the median baseline HIV-1 RNA was 4.6 log(10) copies/mL (range: 2.7-6.9) and the mean decrease at month 3 was -1.07 +/- 1.40 log(10) copies/mL. Ninety per cent of the patients were infected by HIV-1 subtype B variants. Two fosamprenavir/ritonavir mutation scores were constructed: score A (L10F/I/V + L33F + M36I + I54L/M/V/A/T/S + I62V + V82A/F/C/G + I84V + L90M) was based only on mutations associated with a worse VR, whereas score B (L10FIV + L33F + M36I + I54L/M/V/A/T/S + A71V - V77I - N88S + L90M) also took into account favourable mutations. Both scores were independent predictors of VR, however, co-administration of tenofovir was associated with a worse VR and the presence of the N88S protease mutation and co-administration of enfuvirtide with a better VR. CONCLUSIONS: These clinically validated mutation scores should be of interest for the clinical management of PI-experienced patients. The fosamprenavir/ritonavir score A was introduced in the 2006 ANRS algorithm along with isolated mutations I50V and V32I + I47V.


Subject(s)
Carbamates/therapeutic use , Drug Resistance, Viral , HIV Infections/virology , HIV Protease Inhibitors/therapeutic use , HIV-1/drug effects , HIV-1/genetics , Mutation, Missense , Organophosphates/therapeutic use , Ritonavir/therapeutic use , Sulfonamides/therapeutic use , Adult , Amino Acid Substitution/genetics , Carbamates/pharmacology , Female , Furans , Genotype , HIV Infections/drug therapy , HIV Protease Inhibitors/pharmacology , HIV-1/classification , HIV-1/isolation & purification , Humans , Male , Middle Aged , Organophosphates/pharmacology , RNA, Viral/blood , RNA, Viral/genetics , Ritonavir/pharmacology , Sulfonamides/pharmacology , Viral Load
15.
J Med Virol ; 80(5): 762-5, 2008 May.
Article in English | MEDLINE | ID: mdl-18360911

ABSTRACT

Tenofovir disoproxil fumarate (TDF) has become an important component of HIV combination therapy because of its potency and once-daily dosing. Key mutation associated with resistance to TDF is a K65R in the reverse transcriptase (RT) gene. According to occurrence of K70E mutation after failure to TDF regimen, this mutation was recently reported as a mutation associated with TDF resistance in most resistance genotypic algorithms. The aim of this study was to analyze, retrospectively, the prevalence and conditions of selection of HIV-1 RT K70E mutation from a national clinical survey. Absence of selection of K70E in 850 HIV-1-infected naive patients suggests its role in NRTI drug resistance. Prevalence of K70E RT was low (99/41601, 0.24%) in patients treated between 1999 and 2005. Conversely with K65R mutation, thymidine analog mutations (TAMs) can be concomitantly observed with K70E mutation but its frequency decreased as the number of TAM increases. Concomitant association of K65R and K70E was possible but infrequent (11%). At the time of K70E selection, 60% of patients had received or received TDF-containing regimen and one-third received exclusive NRTI regimen. In conclusion, the K70E mutation could be an alternative pathway of TDF resistance, but as the K65R mutation, other NRTI as ABC, ddI, and 3TC could be also associated with the K70E selection.


Subject(s)
Amino Acid Substitution/genetics , Drug Resistance, Viral , HIV Infections/virology , HIV Reverse Transcriptase/genetics , HIV-1/genetics , Mutation, Missense , Anti-HIV Agents/therapeutic use , France , HIV Infections/drug therapy , HIV-1/isolation & purification , Humans , Retrospective Studies , Selection, Genetic
18.
J Med Virol ; 78(8): 1131-40, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16789021

ABSTRACT

It has been recognized that human papillomavirus infection is the major causal factor for high-grade cervical lesions. The aim of the study was to evaluate the relationship between HPV 16 and 18 viral loads and cervical status in different age strata. A duplex real time PCR method was devised to determine HPV 16 and 18 viral load per million of human cells using an in house plasmidic construct as a standard of quantification. The 151 cervical scrapes were collected before colposcopic examination from either abnormal cervico-vaginal smear (group 1, 97 patients) or from post treatment clinical follow-up (group 2, 54 patients). In women aged 30-40, the HPV16 viral loads were significantly higher in high-grade squamous intraepithelial lesion than in low-grade squamous intraepithelial lesion in both groups and HPV18 in group 1. In women aged 20-30 of group 1, high HPV viral load was associated in few cases with high-grade squamous intraepithelial lesion or low-grade squamous intraepithelial lesion, and surprisingly in some patients with normal cervix. HPV 16 and 18 viral loads are related to the severity of cervical lesion, and may be useful in the clinical management of cervical lesions. A specific follow-up may be useful for those with high viral load despite normal cervix.


Subject(s)
Cervix Uteri/virology , Human papillomavirus 16/isolation & purification , Human papillomavirus 18/isolation & purification , Adolescent , Adult , Aged , Aged, 80 and over , Aging , Female , Humans , Middle Aged , Papillomavirus Infections/diagnosis , Papillomavirus Infections/virology , Polymerase Chain Reaction/methods , Recombinant Proteins , Uterine Cervical Neoplasms/diagnosis , Uterine Cervical Neoplasms/virology , Viral Load , Viral Proteins/isolation & purification
19.
Virologie (Montrouge) ; 10(5): 333-340, 2006 Oct 01.
Article in French | MEDLINE | ID: mdl-34731968

ABSTRACT

The choice of an initial antiretroviral triple therapy is based mainly on two nucleoside/tide analogs (NRTIs/NtRTIs) plus either a protease inhibitor (PI) or a non nucleoside reverse transcriptase inhibitor (NNRTI). Three fixed dose coformulations are available (AZT/3TC, Combivir®; ABC/3TC, Kivexa®; TDF/FTC, Truvada®). In this review, we describe how to select one of these fixed-dose coformulations on the basis of their specific genotypic drug resistance profile. Mutations conferring resistance to NRTIs/NtRTIs are classified accord- ing to their molecular mechanism of action. A first group of mutations (K65R, L74V, Q151M, M184V) favors the incorporation of the natural dNTP into the active site of the reverse transcriptase (RT) and leads to resistance by decreasing the incorporation of the inhibitor. A second group of mutations including TAMs (thymidine analog mutations) leads to the removal of the NRTIs previously incorporated in the growing DNA chain. M184V mutation is selected by the three fixed-dose coformulations. The fixed-dose AZT/3TC selects at first M184V mutation then the TAMs that progressively confer a cross-resistance to most of NRTIs/NtRTIs. The fixed-dose coformulation ABC/3TC selects more frequently L74V mutation than K65R or Y115F mutation. The fixed-dose coformulation TDF/FTC selects the K65R mutation. Second-line therapeutic options will be chosen on the basis of these resistance profiles: ABC, ddI, or TDF as a fonction of the number and the nature of TAMs; AZT, D4T, or TDF in case of L74V mutation; AZT or D4T in case of K65R mutation.

20.
J Clin Microbiol ; 42(2): 570-7, 2004 Feb.
Article in English | MEDLINE | ID: mdl-14766818

ABSTRACT

The susceptibility of human immunodeficiency virus type 2 (HIV-2) to protease inhibitors (PI) is largely unknown. We studied HIV-2 protease genes from 21 HIV-2-infected patients who were exposed or not exposed to PI. The aim of this study was (i). to characterize the polymorphism of HIV-2 protease in the absence of drug, (ii). to know whether the HIV-2 protease gene naturally harbors HIV-1 drug resistance codons, and (iii). to identify mutations emerging under PI-selective pressure. Sixty-five HIV-2 RNA or proviral DNA samples were directly sequenced from the plasma or peripheral blood mononuclear cells of 8 patients who had received PI and 13 patients who had never received any antiretroviral. In untreated patients, the highest amino acid variability in HIV-2 protease was observed at positions 14, 40, 43, 46, 65 and 70, and seven codons (10V, 32I, 36I, 46I, 47V, 71V, and 73A) associated with drug resistance in HIV-1 were highly prevalent. In addition, at six positions (positions 7, 46, 62, 71, 90, and 99), the amino acid variability or the amino acid frequencies or both differed significantly in PI-treated and untreated patients, suggesting that mutations 7K-->R, 46V-->I, 62V-->A/T, 71V-->I, 90L-->M and 99L-->F were occurring under PI-selective pressure. At these positions, at least one sample simultaneously harbored both wild-type and mutated codons, while substitutions at positions 62, 71, 90, and 99 were confirmed in a longitudinal analysis. Moreover, the presence of codons 46I and 99F in the absence of drug in HIV-2 subtype B proteases may reflect natural resistance to PI. In conclusion, the present study revealed that HIV-2 strains harbor specific patterns of natural polymorphism and resistance.


Subject(s)
HIV Infections/diagnosis , HIV Protease/genetics , HIV-2 , Polymorphism, Genetic , Adult , Base Sequence , Consensus Sequence , DNA Primers , DNA, Viral/blood , DNA, Viral/genetics , DNA, Viral/isolation & purification , Female , France , HIV Infections/epidemiology , HIV-2/drug effects , HIV-2/enzymology , HIV-2/genetics , Humans , Male , Middle Aged , RNA, Viral/blood , RNA, Viral/genetics , RNA, Viral/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction , Sexual Behavior
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