ABSTRACT
Bats are unique among mammals in that they have evolved the capacity to fly. This has generated strong selective pressure on the morphology and function of their digestive system. Given that in bats intestinal length and nominal surface-area are proportional to body mass, this trait importantly relates to explaining some of their digestive characteristics. We described the relationship between digestive traits and body mass of four species of bats of the family Vespertilionidae living in a montane ecosystem in central Mexico. We calculated food transit time, apparent dry matter digestibility, and defecation rate in feeding trials under captive conditions. We also: (1) built a model of the relationship between digestive traits and body mass to determine if this association was consistent within the members of the family Vespertilionidae, and (2) mapped these traits along the phylogeny to explore how digestive characteristics may have evolved. In our feeding trials, body mass was positively related to transit time and negatively related to apparent dry matter digestibility. The model predicted accurately the transit time in bats with body mass < 20 g. The phylogenetic approach suggested that over the evolutionary history of the family, transit time decreased as digestibility increased. Because of the results obtained here, it is likely that for most bats of the family Vespertilionidae, adaptations in digestive traits to process food have followed evolutionary changes in their body mass. We discuss these findings in a physiological and ecological context.
Subject(s)
Chiroptera , Animals , Digestion , Ecosystem , Mammals , PhylogenyABSTRACT
The tribe Sciurini comprehends the genera Sciurus, Syntheosiurus, Microsciurus, Tamiasciurus and Rheinthrosciurus. The phylogenetic relationships within Sciurus have been only partially done, and the relationship between Mesoamerican species remains unsolved. The phylogenetic relationships of the Mesoamerican tree squirrels were examined using molecular data. Sequence data publicly available (12S, 16S, CYTB mitochondrial genes and IRBP nuclear gene) and cytochrome B gene sequences of four previously not sampled Mesoamerican Sciurus species were analyzed under a Bayesian multispecies coalescence model. Phylogenetic analysis of the multilocus data set showed the neotropical tree squirrels as a monophyletic clade. The genus Sciurus was paraphyletic due to the inclusion of Microsciurus species (M. alfari and M. flaviventer). The South American species S. aestuans and S. stramineus showed a sister taxa relationship. Single locus analysis based on the most compact and complete data set (i.e. CYTB gene sequences), supported the monophyly of the South American species and recovered a Mesoamerican clade including S. aureogaster, S. granatensis and S. variegatoides. These results corroborated previous findings based on cladistic analysis of cranial and post-cranial characters. Our data support a close relationship between Mesoamerican Sciurus species and a sister relationship with South American species, and corroborates previous findings in relation to the polyphyly of Microsciurus and Syntheosciurus paraphyly.
Subject(s)
Cytochromes b/genetics , Sciuridae/genetics , Animals , Bayes Theorem , Biological Evolution , Genes, Mitochondrial , Phylogeny , Sciuridae/classification , Sequence Analysis, DNAABSTRACT
The tribe Sciurini comprehends the genera Sciurus, Syntheosiurus, Microsciurus, Tamiasciurus and Rheinthrosciurus. The phylogenetic relationships within Sciurus have been only partially done, and the relationship between Mesoamerican species remains unsolved. The phylogenetic relationships of the Mesoamerican tree squirrels were examined using molecular data. Sequence data publicly available (12S, 16S, CYTB mitochondrial genes and IRBP nuclear gene) and cytochrome B gene sequences of four previously not sampled Mesoamerican Sciurus species were analyzed under a Bayesian multispecies coalescence model. Phylogenetic analysis of the multilocus data set showed the neotropical tree squirrels as a monophyletic clade. The genus Sciurus was paraphyletic due to the inclusion of Microsciurus species (M. alfari and M. flaviventer). The South American species S. aestuans and S. stramineus showed a sister taxa relationship. Single locus analysis based on the most compact and complete data set (i.e. CYTB gene sequences), supported the monophyly of the South American species and recovered a Mesoamerican clade including S. aureogaster, S. granatensis and S. variegatoides. These results corroborated previous findings based on cladistic analysis of cranial and post-cranial characters. Our data support a close relationship between Mesoamerican Sciurus species and a sister relationship with South American species, and corroborates previous findings in relation to the polyphyly of Microsciurus and Syntheosciurus paraphyly. Rev. Biol. Trop. 62 (2): 649-657. Epub 2014 June 01.
La tribu Sciurini comprende los géneros Sciurus, Syntheosciurus, Microsciurus, Tamiasciurus y Rheinthrosciurus. Las relaciones filogenéticas de Sciurus han sido resueltas parcialmente mientras que las relaciones de las especies Mesoamericanas permanecen sin resolverse. Las relaciones filogenéticas de las ardillas arborícolas mesoamericanas fueron estudiadas empleando datos moleculares. Datos de secuencias disponibles de forma pública (genes mitocondriales CYTB, 12S, 16S y gen nuclear IRBP) en conjunto con secuencias nuevas para el gen del Citocromo B de 4 especies mesoamericanas del genero Sciurus, fueron analizadas empleando un modelo bayesiano de coalescencia multi-especie. Los análisis filogenéticos del conjunto de datos multilocus mostraron que las especies neotropicales forman un clado monofilético. El género Sciurus resulto ser parafilético debido a la inclusión de las especies de Microsciurus (M. alfari y M. flaviventer). Las especies suramericanas S. aestuans y S. stramineus presentaron una relación de especies hermanas. El análisis de un solo locus basado en el conjunto de datos más compacto y completo (secuencias del gen del citocromo B), apoyó la naturaleza monofilética de las especies suramericanas y recuperó un clado mesoamericano que incluye a S. aureogaster, S. granatensis y S. variegatoides. Estos resultados corroboran los descubrimientos previos que emplearon datos morfológicos craneales y pos-craneales. Nuestros datos apoyan la relación cercana entre las especies de Sciurus Mesoamericanas y la relación hermana de estas con las especies de Suramérica, así como también corroboran la relación polifilética de Microsciurus y parafilética de Syntheosciurus previamente reportadas.
Subject(s)
Animals , Cytochromes b/genetics , Sciuridae/genetics , Bayes Theorem , Biological Evolution , Genes, Mitochondrial , Phylogeny , Sequence Analysis, DNA , Sciuridae/classificationABSTRACT
Track analysis and Parsimony analysis of endemicity (PAE) were performed to analyze the distribution pattern of Costa Rican freshwater fishes. A basic matrix (presence/absence) was prepared using the distribution of 77 freshwater fish. The data were analyzed with CLIQUE software in order to find generalized tracks (cliques). Data also were analyzed with the software NONA and Winclada version 1.00.08 in order to perform the Parsimony Analysis of Endemicity (PAE). Fourteen equally probable cliques were found with 31 species in each and the intersection of the amount was selected as a generalized track dividing the country in two main zones: Atlantic slope from Matina to Lake Nicaragua and Pacific slope from the Coto River to the basin of the Tempisque River connected with some branches oriented to the central part of the country. PAE analysis found ten cladogram areas (72 steps, CI=0.45, RI=0.64), using the "strict consensus option" two grouping zones were identified: Atlantic slope and Pacific slope. Both PAE and Track Analysis show the division of the two slopes and the orientation of the generalized track suggests new biogeographical evidence on the influence of both old and new southern elements to explain the migrations of freshwater fish into Central America during two different geological events.
Subject(s)
Fishes/classification , Fresh Water , Animal Migration , Animals , Costa Rica , Geography , Population DynamicsABSTRACT
Track analysis and Parsimony analysis of endemicity (PAE) were performed to analyze the distribution pattern of Costa Rican freshwater fishes. A basic matrix (presence/absence) was prepared using the distribution of 77 freshwater fish. The data were analyzed with CLIQUE software in order to find generalized tracks (cliques). Data also were analyzed with the software NONA and Winclada version 1.00.08 in order to perform the Parsimony Analysis of Endemicity (PAE). Fourteen equally probable cliques were found with 31 species in each and the intersection of the amount was selected as a generalized track dividing the country in two main zones: Atlantic slope from Matina to Lake Nicaragua and Pacific slope from the Coto River to the basin of the Tempisque River connected with some branches oriented to the central part of the country. PAE analysis found ten cladogram areas (72 steps, CI=0.45, RI=0.64), using the "strict consensus option" two grouping zones were identified: Atlantic slope and Pacific slope. Both PAE and Track Analysis show the division of the two slopes and the orientation of the generalized track suggests new biogeographical evidence on the influence of both old and new southern elements to explain the migrations of freshwater fish into Central America during two different geological events.
Con el objetivo de analizar el patrón de distribución de peces de agua dulce de Costa Rica se aplicó un análisis de trazos y de parsimonía de endemismos (PAE). Se construyó una matriz básica utilizando la distribución de 77 especies. Se utilizó el programa CLIQUE con la intención de encontrar los trazos generalizados y NONA y Winclada, versión 1.00.08, con el fin de llevar a cabo el PAE. Se encontró un total de 14 cliques igualmente probables con 31 especies. De esta cantidad se construyó un trazo generalizado que constituye la intersección del total, dividiendo el país en dos zonas: Atlántico, desde Matina hasta el Lago de Nicaragua y Pacífico desde el río Coto hasta el río Tempisque conectado con la región central del país. El PAE encontró diez cladogramas de áreas (72 pasos, CI=0.45, RI=0.64), cuyo consenso estricto identificó dos zonas de agrupamiento: Atlántico y Pacífico. Ambos análisis muestran la división entre las dos vertientes y la orientación de los trazos generalizados sugiere nueva evidencia de la influencia biogeográfica de los denominados elementos de migración antiguo y nuevo del sur, los cuales se habían sugerido empíricamente en el pasado para explicar las migraciones hacia Centroamérica en dos periodos geológicos diferentes.
Subject(s)
Animals , Fishes/classification , Fresh Water , Costa Rica , Population Dynamics , Geography , Animal MigrationABSTRACT
The current taxonomic status of the species and subspecies belonging to the genus Alouatta is addressed by combined phylogenetic analysis using morphological, kariotipyc and molecular data (mitochondrial genes cytocrome oxidase II and cytochrome B). Our result demonstrated that Alouatta palliata is the most basal taxon for the genus in concordance with previous studies, as well as showing the validity of the taxon Alouatta sara as a species. Also our analysis shows that the sex chromosome has evolved from a XY/XX system to a X1X2Y1Y2/X1X1X2X2 system within the genus, as well as an increase in the size and complexity of the hioideal bone.
Subject(s)
Animals , Alouatta/genetics , Sex Chromosomes/genetics , DNA, Mitochondrial/genetics , Phylogeny , Sequence Alignment , Alouatta/anatomy & histology , Alouatta/classification , Karyotyping , Electron Transport Complex IV/genetics , Evolution, Molecular , Cytochrome b Group/geneticsABSTRACT
The current taxonomic status of the species and subspecies belonging to the genus Alouatta is addressed by combined phylogenetic analysis using morphological, kariotipyc and molecular data (mitochondrial genes cytocrome oxidase II and cytochrome B). Our result demonstrated that Alouatta palliata is the most basal taxon for the genus in concordance with previous studies, as well as showing the validity of the taxon Alouatta sara as a species. Also our analysis shows that the sex chromosome has evolved from a XY/XX system to a X1X2Y1Y2/X1X1X2X2 system within the genus, as well as an increase in the size and complexity of the hioideal bone.