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1.
Sensors (Basel) ; 23(4)2023 Feb 04.
Article in English | MEDLINE | ID: mdl-36850360

ABSTRACT

The automotive industry is experiencing a transformation with the rapid integration of software-based systems inside vehicles, which are complex systems with multiple sensors. The use of vehicle sensor data has enabled vehicles to communicate with other entities in the connected vehicle ecosystem, such as the cloud, road infrastructure, other vehicles, pedestrians, and smart grids, using either cellular or wireless networks. This vehicle data are distributed, private, and vulnerable, which can compromise the safety and security of vehicles and their passengers. It is therefore necessary to design an access control mechanism around the vehicle data's unique attributes and distributed nature. Since connected vehicles operate in a highly dynamic environment, it is important to consider context information such as location, time, and frequency when designing a fine-grained access control mechanism. This leads to our research question: How can Attribute-Based Access Control (ABAC) fulfill connected vehicle requirements of Signal Access Control (SAC), Time-Based Access Control (TBAC), Location-Based Access Control (LBAC), and Frequency-Based Access Control (FBAC)? To address the issue, we propose a data flow model based on Attribute-Based Access Control (ABAC) called eXtensible Access Control Markup Language for Mobility (XACML4M). XACML4M adds additional components to the standard eXtensible Access Control Markup Language (XACML) to satisfy the identified requirements of SAC, TBAC, LBAC, and FBAC in connected vehicles. Specifically, these are: Vehicle Data Environment (VDE) integrated with Policy Enforcement Point (PEP), Time Extensions, GeoLocation Provider, Polling Frequency Provider, and Access Log Service. We implement a prototype based on these four requirements on a Raspberry Pi 4 and present a proof-of-concept for a real-world use case. We then perform a functional evaluation based on the authorization policies to validate the XACML4M data flow model. Finally, we conclude that our proposed XACML4M data flow model can fulfill all four of our identified requirements for connected vehicles.

3.
Sci Rep ; 11(1): 17752, 2021 09 07.
Article in English | MEDLINE | ID: mdl-34493751

ABSTRACT

Health information technologies (HITs) are widely employed in healthcare and are supposed to improve quality of care and patient safety. However, so far, their implementation has shown mixed results, which might be explainable by understudied psychological factors of human-HIT interaction. Therefore, the present study investigates the association between the perception of HIT characteristics and psychological and organizational variables among 445 healthcare workers via a cross-sectional online survey in Germany. The proposed hypotheses were tested using structural equation modeling. The results showed that good HIT usability was associated with lower levels of techno-overload and lower IT-related strain. In turn, experiencing techno-overload and IT-related strain was associated with lower job satisfaction. An effective error management culture at the workplace was linked to higher job satisfaction and a slightly lower frequency of self-reported medical errors. About 69% of surveyed healthcare workers reported making errors less frequently than their colleagues, suggesting a bias in either the perception or reporting of errors. In conclusion, the study's findings indicate that ensuring high perceived usability when implementing HITs is crucial to avoiding frustration among healthcare workers and keeping them satisfied. Additionally healthcare facilities should invest in error management programs since error management culture is linked to other important organizational variables.


Subject(s)
Medical Informatics , Personnel, Hospital/psychology , Adult , Attitude of Health Personnel , Computer Literacy , Cross-Sectional Studies , Female , Germany , Humans , Job Satisfaction , Male , Medical Errors/psychology , Medical Errors/statistics & numerical data , Medical Informatics/statistics & numerical data , Middle Aged , Organizational Culture , Self Efficacy , Stress, Psychological/etiology , Surveys and Questionnaires
4.
Reg Environ Change ; 21(3): 84, 2021.
Article in English | MEDLINE | ID: mdl-34456624

ABSTRACT

Flood events in West Africa have devastating impacts on the lives of people. Additionally, developments such as climate change, settlement expansion into flood-prone areas, and modification of rivers are expected to increase flood risk in the future. Policy documents have issued calls for conducting local risk assessments and understanding disaster risk in diverse aspects, leading to an increase in such research. Similarly, in a shift from flood protection to flood risk management, the consideration of various dimensions of flood risk, the necessity of addressing flood risk through an integrated strategy containing structural and non-structural measures, and the presence of residual risk are critical perspectives raised. However, the notion of "residual risk" remains yet to be taken up in flood risk management-related academic literature. This systematic review seeks to approach the notion of residual risk by reviewing information on flood impacts, common measures, and recommendations in academic literature. The review reveals various dimensions of impacts from residual flood risk aside from material damage, in particular, health impacts and economic losses. Infrastructural measures were a dominant category of measures before and after flood events and in recommendations, despite their shortcomings. Also, spatial planning interventions, a more participatory and inclusive governance approach, including local knowledge, sensitisation, and early warning systems, were deemed critical. In the absence of widespread access to insurance schemes, support from social networks after flood events emerged as the most frequent measure. This finding calls for in-depth assessments of those networks and research on potential complementary formal risk transfer mechanisms. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10113-021-01826-7.

5.
J Biol Chem ; 297(2): 100928, 2021 08.
Article in English | MEDLINE | ID: mdl-34274316

ABSTRACT

B-cell lymphoma 6 (BCL6) is a zinc finger transcriptional repressor possessing a BTB-POZ (BR-C, ttk, and bab for BTB; pox virus and zinc finger for POZ) domain, which is required for homodimerization and association with corepressors. BCL6 has multiple roles in normal immunity, autoimmunity, and some types of lymphoma. Mice bearing disrupted BCL6 loci demonstrate suppressed high-affinity antibody responses to T-dependent antigens. The corepressor binding groove in the BTB-POZ domain is a potential target for small compound-mediated therapy. Several inhibitors targeting this binding groove have been described, but these compounds have limited or absent in vivo activity. Biophysical studies of a novel compound, GSK137, showed an in vitro pIC50 of 8 and a cellular pIC50 of 7.3 for blocking binding of a peptide derived from the corepressor silencing mediator for retinoid or thyroid hormone receptors to the BCL6 BTB-POZ domain. The compound has good solubility (128 µg/ml) and permeability (86 nM/s). GSK137 caused little change in cell viability or proliferation in four BCL6-expressing B-cell lymphoma lines, although there was modest dose-dependent accumulation of G1 phase cells. Pharmacokinetic studies in mice showed a profile compatible with achieving good levels of target engagement. GSK137, administered orally, suppressed immunoglobulin G responses and reduced numbers of germinal centers and germinal center B cells following immunization of mice with the hapten trinitrophenol. Overall, we report a novel small-molecule BCL6 inhibitor with in vivo activity that inhibits the T-dependent antigen immune response.


Subject(s)
Proto-Oncogene Proteins c-bcl-6 , Animals , B-Lymphocytes/metabolism , Humans , Mice , Transcription, Genetic , Zinc Fingers
6.
J Cell Mol Med ; 24(19): 11573-11582, 2020 10.
Article in English | MEDLINE | ID: mdl-32858764

ABSTRACT

The IKK-related kinases, IKKε and TBK1, have essential roles in innate immunity in part through modifying MYD88 signalling from the Toll-like receptors to regulate NF-κB signalling. We investigated the expression and function of IKKε and TBK1, in diffuse large B-cell lymphoma (DLBCL). DLBCL cell lines and patient-derived xenografts were used to determine their sensitivity to IKKε and TBK1 inhibitors. To understand the function of IKKε and TBK1 secreted factors were determined following administration of inhibitors. Gene expression microarrays were used to determine the transcriptional effects of inhibitors. Higher TBK1 mRNA levels associated with poorer clinical outcome but IKKε and TBK1 were expressed in both germinal centre and non-germinal centre types of DLBCL. Survival of cell lines Ly10, Ly03 and Pfeiffer, and of some primary human lymphoma cells, was suppressed by a small molecule IKKε/TBK1 inhibitor, DMX3433. DMX3433 reduced IL-10 production from Ly10 and repressed NF-κB mediated transcription. Inhibition of IKKε and TBK1 warrants further investigation as a potential therapeutic route to suppress NF-κB signalling in lymphoma.


Subject(s)
I-kappa B Kinase/metabolism , Interleukin-10/metabolism , Lymphoma, Large B-Cell, Diffuse/metabolism , NF-kappa B/metabolism , Protein Serine-Threonine Kinases/metabolism , Signal Transduction , Animals , Cell Line, Tumor , Chemokines/metabolism , Gene Expression Regulation, Neoplastic/drug effects , Humans , I-kappa B Kinase/antagonists & inhibitors , Intercellular Signaling Peptides and Proteins/metabolism , Lymphoma, Large B-Cell, Diffuse/genetics , Lymphoma, Large B-Cell, Diffuse/pathology , Protein Serine-Threonine Kinases/antagonists & inhibitors , RNA, Messenger/genetics , RNA, Messenger/metabolism , STAT3 Transcription Factor/metabolism , Signal Transduction/drug effects , Small Molecule Libraries/pharmacology , Transcription Factor RelA/metabolism
7.
Blood Adv ; 4(11): 2392-2403, 2020 06 09.
Article in English | MEDLINE | ID: mdl-32484856

ABSTRACT

The mutational landscape of peripheral T-cell lymphoma (PTCL) is being revealed through sequencing of lymph node samples, but there has been little work on the mutational load that is present in cell-free DNA (cfDNA) from plasma. We report targeted sequencing of cfDNA from PTCL patients to demonstrate c.50G>T (p.Gly17Val) in RHOA as previously described in angioimmunoblastic T-cell lymphoma (AITL) and a group of PTCL not otherwise specified (NOS) but also detect novel mutations at c.73A>G (p.Phe25Leu) and c.48A>T (p.Cys16*) of exon 2, which were confirmed by Sanger sequencing. In a group of AITL and PTCL-NOS analyzed by droplet digital polymerase chain reaction, 63% (12/19) showed c.50G>T (p.Gly17Val), 53% (10/19) c.73A>G (p.Phe25Leu), and 37% (7/19) c.48A>T (pCys16*). Sequencing of lymph node tissue in 3 out of 9 cases confirmed the presence of c.73A>G (p.Phe25Leu). Inspection of individual sequencing reads from individual patients showed that a single RHOA allele could contain >1 mutation, suggesting haplotypes of mutations at RHOA. Serial sampling showed changes to RHOA mutational frequency with treatment and the apparent occurrence of clones bearing specific haplotypes associated with relapse. Therefore, sequencing of RHOA from cfDNA has revealed new mutations and haplotypes. The clinical significance of these findings will need to be explored in clinical trials, but liquid biopsy might have potential for guiding treatment decisions in PTCL.


Subject(s)
Lymphoma, T-Cell, Peripheral , rhoA GTP-Binding Protein , Exons , Humans , Lymphoma, T-Cell, Peripheral/genetics , Mutation , Neoplasm Recurrence, Local , Plasma , Positron Emission Tomography Computed Tomography , rhoA GTP-Binding Protein/genetics
8.
Br J Haematol ; 189(1): 54-66, 2020 04.
Article in English | MEDLINE | ID: mdl-32064593

ABSTRACT

Peripheral T-cell lymphomas (PTCL) comprise a heterogeneous group of aggressive lymphoproliferative disorders almost all of which are associated with poor clinical outcomes. Angioimmunoblastic T-cell lymphoma (AITL) and some peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS) have similarities to normal CD4+ T-cell subsets in their gene expression profiles. A cell of origin model is, therefore, emerging and is likely to be refined in the future. Follicular helper (Tfh) T cells are now established as the cell of origin of AITL and about 20% of PTCL-NOS. Sequencing studies have identified recurrent genetic alterations in epigenetic modifiers, T-cell receptor signalling pathway intermediates or RHOA, most commonly a specific mutation leading to RHOA G17V. While PTCL-NOS remains a diagnosis of exclusion, advances in genomics have identified subgroups expressing transcription factors TBX 21 (Th1-like origin) and GATA3 (Th2-like origin). These findings suggest new biomarkers and new therapeutic avenues including the hypomethylating agent azacytidine, or inhibitors of proximal T-cell receptor (TCR) signalling and potentially certain monoclonal antibodies. The advances over the past few years, therefore, prompt stratified medicine approaches to test biologically based treatments and determine the clinical utility of the new disease classifications.


Subject(s)
Epigenesis, Genetic/immunology , Gene Expression Regulation, Neoplastic/immunology , Lymphoma, T-Cell, Peripheral , Mutation, Missense , Neoplasm Proteins , T-Lymphocytes, Helper-Inducer/immunology , rhoA GTP-Binding Protein , Humans , Lymphoma, T-Cell, Peripheral/classification , Lymphoma, T-Cell, Peripheral/genetics , Lymphoma, T-Cell, Peripheral/immunology , Lymphoma, T-Cell, Peripheral/therapy , Neoplasm Proteins/genetics , Neoplasm Proteins/immunology , Receptors, Antigen, T-Cell/genetics , Receptors, Antigen, T-Cell/immunology , Signal Transduction/genetics , Signal Transduction/immunology , rhoA GTP-Binding Protein/genetics , rhoA GTP-Binding Protein/immunology
9.
Sci Rep ; 9(1): 16495, 2019 11 11.
Article in English | MEDLINE | ID: mdl-31712669

ABSTRACT

Multiple genetic aberrations in the regulation of BCL6, including in acetyltransferase genes, occur in clinically aggressive B-cell lymphomas and lead to higher expression levels and activity of this transcriptional repressor. BCL6 is, therefore, an attractive target for therapy in aggressive lymphomas. In this study romidepsin, a potent histone deacetylase inhibitor (HDACi), induced apoptosis and cell cycle arrest in Burkitt and diffuse large B-cell lymphoma cell lines, which are model cells for studying the mechanism of action of BCL6. Romidepsin caused BCL6 acetylation at early timepoints inhibiting its function, while at later timepoints BCL6 expression was reduced and target gene expression increased due to chromatin modification. MYC contributes to poor prognosis in aggressive lymphoma. MYC function is reduced by inhibition of chromatin readers of the bromodomain and extra-terminal repeat (BET) family, which includes BRD4. The novel combination of romidepsin and JQ1, a BRD4 inhibitor was investigated and showed synergy. Collectively we suggest that the combination of HDACi and BRD4i should be pursued in further pre-clinical testing.


Subject(s)
Chromatin Assembly and Disassembly/drug effects , Chromatin Assembly and Disassembly/genetics , Gene Expression Regulation, Neoplastic/drug effects , Histone Deacetylase Inhibitors/pharmacology , Proteins/antagonists & inhibitors , Proto-Oncogene Proteins c-bcl-6/antagonists & inhibitors , Proto-Oncogene Proteins c-bcl-6/genetics , Acetylation , Apoptosis/drug effects , Cell Cycle Checkpoints/drug effects , Cell Cycle Checkpoints/genetics , Cell Differentiation/drug effects , Cell Differentiation/genetics , Cell Line, Tumor , Cell Proliferation/drug effects , Cyclin-Dependent Kinase Inhibitor p21/genetics , Cyclin-Dependent Kinase Inhibitor p27/genetics , Depsipeptides/pharmacology , Disease Progression , Histones/metabolism , Humans , Lymphoma, B-Cell/genetics , Lymphoma, B-Cell/metabolism , Lymphoma, B-Cell/pathology , Plasma Cells/cytology , Plasma Cells/drug effects , Plasma Cells/metabolism , Proto-Oncogene Proteins c-bcl-6/metabolism
10.
Toxicol Lett ; 312: 109-117, 2019 Sep 15.
Article in English | MEDLINE | ID: mdl-31048000

ABSTRACT

Sulfur mustard (SM) is a highly toxic chemical warfare agent, which produces blisters after skin contact. Treatment of SM-induced adverse health effects, such as cutaneous blistering, ulceration, and inflammation remains a challenging task. Antidotes or specific therapeutic measures are lacking. Some drugs (e.g. cyclooxygenase (COX) inhibitors) exhibited beneficial effects after SM poisoning in vivo. However, in vitro studies that evaluate and compare the potency of COX inhibitors are missing. In the presented study, non-specific (acetylsalicylic acid, ibuprofen, diclofenac, indomethacin, and piroxicam), COX-2-specific (celecoxib and parecoxib) inhibitors and COX-independent drugs (paracetamol and tofacitinib) were compared regarding anti-inflammatory and cytoprotective effects after SM exposure in post-exposure treatment settings. Normal human epidermal keratinocytes (NHEK) were used as a surrogate model. Prostaglandin E2 (PGE2) formation, a direct indicator for COX activity, was determined by ELISA. Changes in pro-inflammatory cytokine levels after SM exposures were assessed by quantitative determination of 27 inflammatory cytokines using a multiplex method. Cytotoxicity was determined using an XTT viability assay. The results demonstrated that SM highly increased PGE2 production and release of pro-inflammatory cytokines, predominantly IL-6, IL-8 and TNF-α. In general, all COX inhibitors and paracetamol were able to reduce the PGE2 formation, while tofacitinib, an inhibitor of Janus kinase, had no influence on PGE2 levels. In addition, IL-6, IL-8, and TNF-α formation were also inhibited, but sometimes independently of PGE2. The COX-2 specific celecoxib was identified as the most potent drug to reduce IL-6, IL-8 and TNF-α formation after SM exposures in vitro. However, cell viability was not improved significantly by any of the investigated drugs in our experiments.


Subject(s)
Cyclooxygenase Inhibitors/pharmacology , Cytokines/metabolism , Inflammation/chemically induced , Keratinocytes/drug effects , Mustard Gas/toxicity , Cell Line , Cytokines/genetics , Gene Expression Regulation/drug effects , Humans , Inflammation/metabolism
11.
PLoS One ; 14(4): e0215765, 2019.
Article in English | MEDLINE | ID: mdl-31013298

ABSTRACT

Recent analyses of the genetics of peripheral T-cell lymphoma (PTCL) have shown that a large proportion of cases are derived from normal follicular helper (Tfh) T-cells. The sanroque mouse strain bears a mutation that increases Tfh cell number and heterozygous animals (Roquinsan/+) develop lymphomas similar to human Tfh lymphoma. Here we demonstrate the usefulness of Roquinsan/+ animals as a pre-clinical model of Tfh lymphoma. Long latency of development and incomplete penetrance in this strain suggests the lymphomas are genetically diverse. We carried out preliminary genetic characterisation by whole exome sequencing and detected tumor specific mutations in Hsp90ab1, Ccnb3 and RhoA. Interleukin-2-inducible kinase (ITK) is expressed in Tfh lymphoma and is a potential therapeutic agent. A preclinical study of ibrutinib, a small molecule inhibitor of mouse and human ITK, in established lymphoma was carried out and showed lymphoma regression in 8/12 (67%) mice. Using T2-weighted MRI to assess lymph node volume and diffusion weighted MRI scanning as a measure of function, we showed that treatment increased mean apparent diffusion coefficient (ADC) suggesting cell death, and that change in ADC following treatment correlated with change in lymphoma volume. We suggest that heterozygous sanroque mice are a useful model of Tfh cell derived lymphomas in an immunocompetent animal.


Subject(s)
Antineoplastic Agents/administration & dosage , Lymphoma, T-Cell, Peripheral/drug therapy , Pyrazoles/administration & dosage , Pyrimidines/administration & dosage , Adenine/analogs & derivatives , Administration, Oral , Animals , Disease Models, Animal , Drug Evaluation, Preclinical/methods , Heterozygote , Humans , Lymph Nodes/cytology , Lymph Nodes/diagnostic imaging , Lymph Nodes/drug effects , Lymphoma, T-Cell, Peripheral/diagnostic imaging , Lymphoma, T-Cell, Peripheral/genetics , Magnetic Resonance Imaging , Mice , Piperidines , Primary Cell Culture , T-Lymphocytes, Helper-Inducer/drug effects , T-Lymphocytes, Helper-Inducer/pathology , Treatment Outcome , Tumor Cells, Cultured , Ubiquitin-Protein Ligases/genetics
13.
J Vis Exp ; (143)2019 01 07.
Article in English | MEDLINE | ID: mdl-30663690

ABSTRACT

Aberrant T-follicular helper (Tfh) cell activity is detectable in autoimmune conditions and their presence is associated with clinical outcomes when the lymph node microenvironment in B-cell non-Hodgkin's lymphoma is analyzed. Subsets of circulating T-follicular helper cells (cTfh), the circulating memory compartment of Tfh cells in the blood, are also perturbed in disease and therefore represent potential novel predictive biomarkers. Peripheral blood-based testing is advantageous because it is relatively non-invasive and allows simple serial monitoring.This article describes a method for isolating CD4+ T-cells from human blood, and further analysis by flow-cytometry to enumerate cTfh cells and the proportions of their various subsets (cTfhPD-1-/+/hi, cTfh1,2,17 and cTfh1/17). The level of these subsets was then compared between normal subjects and patients with lymphoma. We found that the method was robust enough to obtain reliable results from routinely collected patient material. The technique we describe for the analysis can be easily adapted to cell sorting and downstream applications such as RT-PCR.


Subject(s)
Biomarkers/metabolism , CD4-Positive T-Lymphocytes/immunology , Flow Cytometry/methods , T-Lymphocytes, Helper-Inducer/immunology , Adult , Autoimmune Diseases , Female , Humans , Male
15.
Br J Haematol ; 184(6): 957-968, 2019 03.
Article in English | MEDLINE | ID: mdl-30548597

ABSTRACT

Delayed lymphocyte and T-cell immune reconstitution following bendamustine-rituximab (BR) for indolent non-Hodgkin lymphoma (iNHL) has been described, but no information is available for chronic lymphocytic leukaemia (CLL). We present a population-based retrospective analysis of immune reconstitution and risk of infection following BR. Outcomes included timing/correlates of CD4+ recovery and risk of ≥grade 3 infections. Consecutively treated patients (1 April 2014 to 31 January 2017) were included (n = 295),with a median age of 65 years (range 33-92); 57% were 1st line treatments. Median cumulative bendamustine dose was 1080 mg/m2 (range 140-1440 mg/m2 ). CD4/CD8/CD19/NK subsets were available for 148 patients. Median follow-up was 24 months. Median times to lymphocyte count (ALC) recovery (≥1 × 109 /l) and CD4+ recovery (≥0·2 × 109 /l) were 26 and 24 months, respectively. Bendamustine total dose >1080 mg/m2 (hazard ratio [HR] 0·4; 95% confidence interval [CI]: 0·2-0·8), end-of-treatment ALC ≤0·4 × 109 /l (HR 0·53; 95% CI: 0·3-0·9) and CD4+ <0·1 × 109 /l 1-year post-BR (HR 0·03; 95% CI: 0·008-0·15) were covariables for delayed CD4+ recovery. ALC-recovery ≥1 × 109 /l was an unreliable predictor of CD4+ recovery (negative predictive vale 74%, positive predictive value 86%, likelihood ratio 3·3). CD4+ lymphopenia >3 years was a significant risk factor for ≥grade 3 infections (Odds ratio 3·4; 95% CI: 1·4-6·9). CD4+ recovery after BR is unexpectedly delayed and late recovery is associated with risk of serious infections. Monitoring CD4+ following BR could identify patients at high risk of delayed infections.


Subject(s)
Antineoplastic Agents, Alkylating/therapeutic use , Bendamustine Hydrochloride/therapeutic use , Lymphoproliferative Disorders/drug therapy , Rituximab/therapeutic use , T-Lymphocyte Subsets/metabolism , Adult , Aged , Aged, 80 and over , Antineoplastic Agents, Alkylating/pharmacology , Bendamustine Hydrochloride/pharmacology , Female , Humans , Male , Middle Aged , Rituximab/pharmacology
16.
J Cell Mol Med ; 23(1): 340-348, 2019 01.
Article in English | MEDLINE | ID: mdl-30353642

ABSTRACT

CUDC-907, a dual PI3K/HDAC inhibitor, has been proposed to have therapeutic potential in hematopoietic malignancies. However, the molecular mechanisms of its effects in chronic lymphocytic leukaemia (CLL) remain elusive. We show that CLL cells are sensitive to CUDC-907, even under conditions similar to the protective microenvironment of proliferation centres. CUDC-907 inhibited PI3K/AKT and HDAC activity, as expected, but also suppressed RAF/MEK/ERK and STAT3 signalling and reduced the expression of anti-apoptotic BCL-2 family proteins BCL-2, BCL-xL, and MCL-1. Moreover, CUDC-907 downregulated cytokines BAFF and APRIL and their receptors BAFFR, TACI, and BCMA, thus blocking BAFF-induced NF-κB signalling. T cell chemokines CCL3/4/17/22 and phosphorylation of CXCR4 were also reduced by CUDC-907. These data indicated that CUDC-907 abrogates different protective signals and suggested that it might sensitize CLL cells to other drugs. Indeed, combinations of low concentrations of CUDC-907 with inhibitors of BCL2, BTK, or the NF-κB pathway showed a potent synergistic effect. Our data indicate that, apart from its known functions, CUDC-907 blocks multiple pro-survival pathways to overcome microenvironment protection in CLL cells. This provides a rationale to evaluate the clinical relevance of CUDC-907 in combination therapies with other targeted inhibitors.


Subject(s)
Antineoplastic Agents/pharmacology , Leukemia, Lymphocytic, Chronic, B-Cell/drug therapy , Leukemia, Lymphocytic, Chronic, B-Cell/pathology , Morpholines/pharmacology , Pyrimidines/pharmacology , B-Cell Activating Factor/metabolism , Cell Survival/drug effects , Chemokines/metabolism , Humans , Leukemia, Lymphocytic, Chronic, B-Cell/metabolism , NF-kappa B/metabolism , Phosphoinositide-3 Kinase Inhibitors , Receptors, CXCR4/metabolism , Signal Transduction/drug effects , Tumor Cells, Cultured , Tumor Microenvironment/drug effects , Tumor Necrosis Factor Ligand Superfamily Member 13/metabolism
17.
Sci Rep ; 8(1): 14216, 2018 09 21.
Article in English | MEDLINE | ID: mdl-30242208

ABSTRACT

Patients with peripheral T-cell lymphomas generally have poor clinical outcomes with conventional chemotherapy. Recent advances have demonstrated that a large subgroup of PTCL are derived from follicular helper (Tfh) T-cells. These cases show a characteristic pattern of gene expression, which includes high-level protein expression of interleukin-2-inducible kinase (ITK). ITK is a member of the TEC family of kinases and normally has essential functions in regulating T-cell receptor signalling and T-cell differentiation. Here we report a side-by-side comparison of four ITK inhibitors. We investigate effects on apoptosis, phosphorylation of signaling molecules, calcium flux and migration. In line with a specific mechanism of action ONO7790500 and BMS509744 did not inhibit MEK1/2 or AKT phosphorylation although other ITK inhibitors, ibrutinib and PF-06465469, did have this effect. Specific ITKi had modest effects on apoptosis alone but there was definite synergy with doxorubicin, pictilisib (PI3Ki) and idelalisib (PI3Kδi). ITKi repressed migration of Jurkat cells caused by CXCL12 and the CXCR4 antagonist, plerixafor enhanced this effect. Overall ITKi may have several mechanisms of action that will be therapeutically useful in PTCL including reduction in survival and perturbation of trafficking.


Subject(s)
Lymphoma, T-Cell, Peripheral/drug therapy , Protein-Tyrosine Kinases/pharmacology , T-Lymphocytes, Helper-Inducer/drug effects , Apoptosis/drug effects , Cell Differentiation/drug effects , Cell Line, Tumor , Cell Movement/drug effects , Chemokine CXCL12/metabolism , Humans , Jurkat Cells , Lymphoma, T-Cell, Peripheral/metabolism , Phosphorylation/drug effects , Protein-Tyrosine Kinases/antagonists & inhibitors , Protein-Tyrosine Kinases/metabolism , Receptors, CXCR4/metabolism , Signal Transduction/drug effects , T-Lymphocytes, Helper-Inducer/metabolism
18.
Diagn Pathol ; 13(1): 74, 2018 Sep 15.
Article in English | MEDLINE | ID: mdl-30219078

ABSTRACT

BACKGROUND: Abnormally sustained immune reactions drive B-cell proliferation in some cases of marginal zone lymphoma but the CD4+ T-cell subsets, which are likely to contribute to the B-cell responses in the tumour microenvironment, are not well characterised and neither has the spatial distribution of the different subsets in involved lymph nodes been investigated. METHODS: Employing a workflow of multiplex semi-automated immunohistochemistry combined with image processing we investigated association between infiltrating T-cells and proliferating lymphoma B-cells. RESULTS: Both total numbers of activating follicular helper (Tfh) cells (defined by high expression of PD1) and suppressive regulatory (Treg) T-cells (defined by FOXP3+ expression) and the Tfh:Treg ratio, assessed over relatively large areas of tissue, varied among cases of marginal zone lymphoma. We determined spatial distribution and demonstrated that PD1hi cells showed significantly more clustering than did FOXP3+. To investigate the association of infiltrating T-cells with lymphoma B-cells we employed Pearson correlation and Morisita-Horn index, statistical measures of interaction. We demonstrated that PD1hi cells were associated with proliferating B-cells and confirmed this by nearest neighbour analysis. CONCLUSIONS: The unexpected architectural complexity of T-cell infiltration in marginal zone lymphoma, revealed in this study, further supports a key role for Tfh cells in driving proliferation of lymphoma B-cells. We demonstrate the feasibility of digital analysis of spatial architecture of T-cells within marginal zone lymphoma and future studies will be needed to determine the clinical importance of these observations.


Subject(s)
B-Lymphocytes/pathology , Cell Proliferation/physiology , Lymphoma, B-Cell, Marginal Zone/pathology , T-Lymphocytes, Regulatory/pathology , Aged , B-Lymphocytes/immunology , Female , Forkhead Transcription Factors/metabolism , Humans , Immunohistochemistry/methods , Lymphoma, B-Cell, Marginal Zone/metabolism , Male , Middle Aged , T-Lymphocytes, Regulatory/immunology
19.
Blood Adv ; 2(15): 1869-1881, 2018 08 14.
Article in English | MEDLINE | ID: mdl-30082430

ABSTRACT

CD40L/interleukin-4 (IL-4) stimulation occurs in vivo in the tumor microenvironment and induces global translation to varying degrees in individuals with chronic lymphocytic leukemia (CLL) in vitro. However, the implications of CD40L/IL-4 for the translation of specific genes is not known. To determine the most highly translationally regulated genes in response to CD40L/IL-4, we carried out ribosome profiling, a next-generation sequencing method. Significant differences in the translational efficiency of DNA damage response genes, specifically ataxia-telangiectasia-mutated kinase (ATM) and the MRE11/RAD50/NBN (MRN) complex, were observed between patients, suggesting different patterns of translational regulation. We confirmed associations between CD40L/IL-4 response and baseline ATM levels, induction of ATM, and phosphorylation of the ATM targets, p53 and H2AX. X-irradiation was used to demonstrate that CD40L/IL-4 stimulation tended to improve DNA damage repair. Baseline ATM levels, independent of the presence of 11q deletion, correlated with overall survival (OS). Overall, we suggest that there are individual differences in translation of specific genes, including ATM, in response to CD40L/IL-4 and that these interpatient differences might be clinically important.


Subject(s)
Ataxia Telangiectasia Mutated Proteins/immunology , CD40 Ligand/immunology , DNA Damage , Interleukin-4/immunology , Leukemia, Lymphocytic, Chronic, B-Cell/immunology , Protein Biosynthesis/immunology , Ataxia Telangiectasia Mutated Proteins/genetics , CD40 Ligand/genetics , Female , Gamma Rays , Histones/genetics , Histones/immunology , Humans , Interleukin-4/genetics , Leukemia, Lymphocytic, Chronic, B-Cell/pathology , Male , Protein Biosynthesis/genetics , Protein Biosynthesis/radiation effects , Tumor Microenvironment/genetics , Tumor Microenvironment/immunology , Tumor Microenvironment/radiation effects , Tumor Suppressor Protein p53/genetics , Tumor Suppressor Protein p53/immunology
20.
Am J Kidney Dis ; 72(6): 890-894, 2018 12.
Article in English | MEDLINE | ID: mdl-29941220

ABSTRACT

Sézary syndrome is a rare aggressive leukemic variant of primary cutaneous T-cell lymphoma, typically presenting with erythroderma, lymphadenopathy, and an atypical clonal T-cell population. Though it often involves the spleen and liver, we report a case of Sézary syndrome with renal involvement that was treated successfully. Visceral involvement confers a poor prognosis requiring systemic treatment. The patient we describe was a 66-year-old man who was referred from Dermatology services for deteriorating kidney function. Polymerase chain reaction of genomic DNA from skin and kidney biopsies confirmed a clonal T-cell population matching a population isolated in peripheral blood. The patient was treated initially with alemtuzumab, which led to a significant improvement in kidney function, and he has subsequently received a successful allogeneic stem cell transplant. This case represents a rare cause of decreased kidney function and highlights the role of biopsy in patients with suspected Sézary syndrome.


Subject(s)
Alemtuzumab/administration & dosage , Hematopoietic Stem Cell Transplantation/methods , Kidney Neoplasms/secondary , Sezary Syndrome/pathology , Skin Neoplasms/pathology , Aged , Biopsy, Needle , Combined Modality Therapy , Follow-Up Studies , Humans , Immunohistochemistry , Kidney Function Tests , Kidney Neoplasms/therapy , Male , Sezary Syndrome/therapy , Skin Neoplasms/therapy , Transplantation, Homologous , Treatment Outcome
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