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Clustal W and Clustal X version 2.0.

Larkin, M A; Blackshields, G; Brown, N P; Chenna, R; McGettigan, P A; McWilliam, H; Valentin, F; Wallace, I M; Wilm, A; Lopez, R; Thompson, J D; Gibson, T J; Higgins, D G.

Bioinformatics ; 23(21): 2947-8, 2007 Nov 01.

Article in English | MEDLINE | ID: mdl-17846036

ABSTRACT

SUMMARY: The Clustal W and Clustal X multiple sequence alignment programs have been completely rewritten in C++. This will facilitate the further development of the alignment algorithms in the future and has allowed proper porting of the programs to the latest versions of Linux, Macintosh and Windows operating systems. AVAILABILITY: The programs can be run on-line from the EBI web server: http://www.ebi.ac.uk/tools/clustalw2. The source code and executables for Windows, Linux and Macintosh computers are available from the EBI ftp site ftp://ftp.ebi.ac.uk/pub/software/clustalw2/

Subject(s)

Algorithms , Computer Graphics , Sequence Alignment/methods , Sequence Analysis, Protein/methods , Software , User-Computer Interface , Amino Acid Sequence , Cluster Analysis , Molecular Sequence Data , Programming Languages

Mind the gaps: progress in progressive alignment.

Higgins, D G; Blackshields, G; Wallace, I M.

Proc Natl Acad Sci U S A ; 102(30): 10411-2, 2005 Jul 26.

Article in English | MEDLINE | ID: mdl-16027352

Subject(s)

Computational Biology/methods , Sequence Alignment/methods , Sequence Homology, Nucleic Acid , Algorithms , Phylogeny

ABSTRACT

Subject(s)

Subject(s)

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