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1.
J Transl Med ; 14(1): 217, 2016 07 22.
Article in English | MEDLINE | ID: mdl-27448600

ABSTRACT

BACKGROUND: Psoriasis is a chronic inflammatory disease of the skin and joints that may also have systemic inflammatory effects, including the development of cardiovascular disease (CVD). Multiple epidemiologic studies have demonstrated increased rates of CVD in psoriasis patients, although a causal link has not been established. A growing body of evidence suggests that sub-clinical systemic inflammation may develop in psoriasis patients, even from a young age. We aimed to evaluate the prevalence of atherosclerosis and identify specific clinical risk factors associated with early vascular inflammation. METHODS: We conducted a cross-sectional study of a tertiary care cohort of psoriasis patients using coronary artery calcium (CAC) score and carotid intima-media thickness (CIMT) to detect atherosclerosis, along with high sensitivity C-reactive protein (hsCRP) to measure inflammation. Psoriasis patients and controls were recruited from our tertiary care dermatology clinic. Presence of atherosclerosis was defined using validated numeric values within CAC and CIMT imaging. Descriptive data comparing groups was analyzed using Welch's t test and Pearson Chi square tests. Logistic regression was used to analyze clinical factors associated with atherosclerosis, and linear regression to evaluate the relationship between psoriasis and hsCRP. RESULTS: 296 patients were enrolled, with 283 (207 psoriatic and 76 controls) having all data for the hsCRP and atherosclerosis analysis. Atherosclerosis was found in 67.6 % of psoriasis subjects versus 52.6 % of controls; Psoriasis patients were found to have a 2.67-fold higher odds of having atherosclerosis compared to controls [95 % CI (1.2, 5.92); p = 0.016], after adjusting for age, gender, race, BMI, smoking, HDL and hsCRP. In addition, a non-significant trend was found between HsCRP and psoriasis severity, as measured by PASI, PGA, or BSA, again after adjusting for confounders. CONCLUSIONS: A tertiary care cohort of psoriasis patients have a high prevalence of early atherosclerosis, increased hsCRP, and psoriasis remains a risk factor for the presence of atherosclerosis even after adjustment of key confounding clinical factors. Psoriasis may contribute to an accelerated systemic inflammatory cascade resulting in increased risk of CVD and CV events.


Subject(s)
Atherosclerosis/complications , Calcium/metabolism , Carotid Intima-Media Thickness , Coronary Vessels/metabolism , Coronary Vessels/pathology , Psoriasis/complications , Tertiary Care Centers , Atherosclerosis/epidemiology , C-Reactive Protein/metabolism , Cohort Studies , Cross-Sectional Studies , Demography , Female , Humans , Male , Middle Aged , Prevalence
2.
Diabetes Obes Metab ; 18(5): 519-27, 2016 May.
Article in English | MEDLINE | ID: mdl-26876427

ABSTRACT

AIMS: To examine whether co-administration of intestinal alkaline phosphatase (IAP) with antibiotics early in life may have a preventive role against metabolic syndrome (MetS) in mice. METHODS: A total of 50 mice were allocated to four treatment groups after weaning. Mice were treated with azithromycin (AZT) ± IAP, or with no AZT ± IAP, for three intermittent 7-day cycles. After the last treatment course, the mice were administered a regular chow diet for 5 weeks and subsequently a high-fat diet for 5 weeks. Body weight, food intake, water intake, serum lipids, glucose levels and liver lipids were compared. 16S rRNA gene pyrosequencing was used to determine the differences in microbiome composition. RESULTS: Exposure to AZT early in life rendered mice susceptible to MetS in adulthood. Co-administration of IAP with AZT completely prevented this susceptibility by decreasing total body weight, serum lipids, glucose levels and liver lipids to the levels of control mice. These effects of IAP probably occur as a result of changes in the composition of specific bacterial taxa at the genus and species levels (e.g. members of Anaeroplasma and Parabacteroides). CONCLUSIONS: Co-administration of IAP with AZT early in life prevents mice from susceptibility to the later development of MetS. This effect is associated with alterations in the composition of the gut microbiota. IAP may represent a novel treatment against MetS in humans.


Subject(s)
Alkaline Phosphatase/therapeutic use , Anti-Bacterial Agents/adverse effects , Azithromycin/adverse effects , Dietary Supplements , Dysbiosis/prevention & control , Intestinal Mucosa/enzymology , Metabolic Syndrome/prevention & control , Acholeplasma/classification , Acholeplasma/drug effects , Acholeplasma/growth & development , Acholeplasma/isolation & purification , Alkaline Phosphatase/adverse effects , Animals , Bacteroides/classification , Bacteroides/drug effects , Bacteroides/growth & development , Bacteroides/isolation & purification , Cattle , Diet, High-Fat/adverse effects , Dietary Supplements/adverse effects , Dysbiosis/chemically induced , Dysbiosis/microbiology , Dysbiosis/physiopathology , Feces/microbiology , Gastrointestinal Microbiome/drug effects , Male , Metabolic Syndrome/complications , Metabolic Syndrome/etiology , Metabolic Syndrome/microbiology , Mice, Inbred C57BL , Molecular Typing , Obesity/complications , Obesity/etiology , Obesity/microbiology , Obesity/prevention & control , Weaning , Weight Gain/drug effects
3.
Neurogastroenterol Motil ; 24(9): 874-e400, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22626027

ABSTRACT

BACKGROUND: Congenital aganglionosis (Hirschsprung's disease) results in colonic dysmotility and a risk for Hirschsprung's-associated enterocolitis (HAEC), whose cause is unknown. We hypothesized that aganglionosis leads to microbiome changes that may contribute to HAEC risk. METHODS: Colon and fecal samples were collected from endothelin receptor B-null (Ednrb(-/-) ) mice, an established model of colorectal aganglionosis, at postnatal day 7 (P7), P20, and P24. We determined microbiome composition by 16S ribosomal RNA gene pyrosequencing and fecal metabolite profile by nuclear magnetic resonance spectroscopy. KEY RESULTS: Wild-type (WT) mice exhibited increasing species diversity with age, with mutant mice possessing even greater diversity. WT and mutant microbiomes, both fecal and colonic, significantly segregated by principal coordinates analysis based on species composition at all ages examined. Importantly, mutant mice contained more Bacteroidetes and less Firmicutes than WT, with additional genus- and species-level differences observed. Notably, mutant P7 colon was dominated by coagulase-negative Staphylococcus species, which were rare in WT. Mutant fecal metabolite profiles also differed, particularly in the abundance of formate, a short-chain fatty acid product of microbial fermentation. CONCLUSIONS & INFERENCES: Colorectal aganglionosis is associated with early and sustained disruption of the normal colonic and fecal microbiome, supporting the enteric nervous system as a determinant of microbiome composition. Furthermore, the differences observed suggest a potential contributory role for the microbiome in the etiology of HAEC. These findings provide a basis for further studies to determine the causative role of specific bacterial communities in HAEC and the potential to restore the normal microbiome in Hirschsprung's disease.


Subject(s)
Colon/microbiology , Enterocolitis/microbiology , Feces/chemistry , Hirschsprung Disease/microbiology , Metagenome/physiology , RNA, Ribosomal, 16S/analysis , Animals , Bacteria/classification , Bacteria/genetics , Biodiversity , Disease Models, Animal , Enterocolitis/etiology , Hirschsprung Disease/complications , Magnetic Resonance Spectroscopy , Mice , Mice, Transgenic
4.
Br J Dermatol ; 164(4): 750-8, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21070202

ABSTRACT

BACKGROUND: There is ongoing debate regarding the initiation of psoriatic plaque as primarily arising from an anomaly in epidermal keratinocytes (KCs) or from abnormalities in immunocytes that secondarily activate otherwise normal KCs. In mice engineered to overexpress the angiopoietin receptor Tie2 in KCs, skin spontaneously develops the characteristic clinical, histological and immune cell phenotypes of psoriasis which can be reversed with either transgene repression or ciclosporin administration, suggesting key roles for both KCs and T cells in mediating the skin disease in this murine model. OBJECTIVES: To determine if antigen-presenting cells (APCs) and macrophages alone are sufficient to sustain psoriasiform inflammation in the KC-Tie2 murine model of psoriasis. METHODS: Clodronate liposomes were intradermally injected into involved dorsal skin of KC-Tie2 or control animals once a week for 6weeks and acanthosis, angiogenesis, immune cell infiltration and cytokine production were quantitated using immunohistochemistry and interactive image analyses, enzyme-linked immunosorbent assay (ELISAs) and quantitative real-time polymerase chain reaction (qRT-PCR). RESULTS: Clodronate liposome injection eliminated CD11c+, F4/80+ and CD11b+ cells in the skin and returned CD8+ T-cell numbers to control mouse levels. APC depletion in KC-Tie2 mouse skin resulted in resolution of the acanthotic skin phenotype, decreased dermal angiogenesis, and a return to control mouse levels for interleukin (IL)-1α, IL-6, IL-23 and tumour necrosis factor (TNF)-α expression and modest reductions in interferon-γ and IL-17. CONCLUSIONS: These findings suggest a critical role for APCs and myeloid cell-derived IL-23 and TNF-α and underscore the importance of Th1 and Th17 T cells in maintaining the psoriasiform skin phenotype in the KC-Tie2 mouse model.


Subject(s)
Antigen-Presenting Cells/drug effects , Antigens, CD/drug effects , Bone Density Conservation Agents/pharmacology , Clodronic Acid/pharmacology , Psoriasis/drug therapy , Animals , Antigen-Presenting Cells/immunology , Antigens, CD/analysis , Clodronic Acid/administration & dosage , Cytokines/metabolism , Enzyme-Linked Immunosorbent Assay , Immunohistochemistry , Injections, Intradermal , Liposomes/administration & dosage , Mice , Mice, Knockout , Neovascularization, Physiologic/drug effects , Neovascularization, Physiologic/immunology , Phenotype , Polymerase Chain Reaction , Psoriasis/immunology , Psoriasis/metabolism , Skin/blood supply , Skin/immunology
5.
Neuroscience ; 147(1): 90-6, 2007 Jun 15.
Article in English | MEDLINE | ID: mdl-17512672

ABSTRACT

Symptoms of high altitude sickness including headache and neuropsychological dysfunction are thought to result from prolonged exposure to hypoxia. In order to explain how the brain adapts to lower oxygen pressure at high altitude, CD1 mice were exposed to 3 weeks of hypobaric hypoxic conditions. Analyses of the neuronal morphology of striatal medium spiny neurons (MSNs) revealed a significant decrease in dendritic length, yet no change in dendritic volume, in hypoxic mice relative to normoxic mice. Vascular data indicated an increase in blood vessel area in the striatum of mice exposed to prolonged hypoxia. A mouse model of high altitude exposure may assist in elucidating the mechanisms of cerebral adaptation to high altitudes in humans, and therefore aid in developing successful prevention techniques and treatment of problems associated with high altitude disease.


Subject(s)
Blood Vessels/physiology , Cell Hypoxia , Dendrites/physiology , Neostriatum/cytology , Adaptation, Physiological , Altitude Sickness/physiopathology , Animals , Blood Vessels/cytology , Cerebrovascular Circulation/physiology , Dendrites/classification , Disease Models, Animal , Mice , Neostriatum/blood supply , Neurons/cytology , Oxygen Consumption/physiology , Random Allocation
6.
J Microsc ; 206(Pt 1): 54-64, 2002 Apr.
Article in English | MEDLINE | ID: mdl-12000563

ABSTRACT

Lineal structures in biological tissue support a wide variety of physiological functions, including membrane stabilization, vascular perfusion, and cell-to-cell communication. In 1953, Smith and Guttman demonstrated a stereological method to estimate the total length density (Lv) of linear objects based on random intersections with a two-dimensional sampling probe. Several methods have been developed to ensure the required isotropy of object-probe intersections, including isotropic-uniform-random (IUR) sections, vertical-uniform-random (VUR) slices, and isotropic virtual planes. The disadvantages of these methods are the requirements for inconvenient section orientations (IUR, VUR) or complex counting rules at multiple focal planes (isotropic virtual planes). To overcome these limitations we report a convenient and straightforward approach to estimate Lv and total length, L, for linear objects on tissue sections cut at any arbitrary orientation. The approach presented here uses spherical probes that are inherently isotropic, combined with unbiased fractionator sampling, to demonstrate total L estimation for thin nerve fibres in dorsal hippocampus of the mouse brain.


Subject(s)
Molecular Probes/metabolism , Animals , Anisotropy , Biometry/methods , Brain/anatomy & histology , Dentate Gyrus/anatomy & histology , Hippocampus/anatomy & histology , Male , Mice , Mice, Inbred Strains , Microspheres , Nerve Fibers
7.
Eur J Neurosci ; 12(6): 1867-81, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10886328

ABSTRACT

The common neurotrophin receptor (p75NGFR) can signal in vitro through activation of the c-Jun N-terminal kinase (JNK) pathway and nuclear translocation of NFKappaB. Activation of JNK and its substrate c-Jun can lead to apoptosis. We investigated these activities in vivo by comparing immunoreactivity for phosphorylated(p) SEK-1 (or MKK4, which activates JNK), c-Jun (ser63, ser73) and nuclear translocation of NFKappaB-p50 in tissue sections through the forebrain of control and p75NGFR-deficient mice. During postnatal development, SEK1p-immunoreactivity was detectable in p75NGFR-positive cholinergic neurons and p75NGFR-negative neurons throughout the forebrain in control mice. During development, few cells contained c-Junp, although many neurons contained c-Jun. No obvious c-Jun immunostaining was present in the adult forebrain. At any age, NFKappaB-p50 immunoreactivity was seen in nuclei of most cells throughout the forebrain. Following fimbria fornix transection in adult mice, few basal forebrain neurons contained SEK1p while many axotomized choline acetyltransferase (ChAT)-positive neurons contained c-Junp and nuclear NFKappaB-p50. The immunostaining patterns of SEK1p, c-Junp and NFKB during development and following injury were largely similar in p75NGFR-deficient mice. During development, cells throughout the forebrain had TdT-mediated dUTP-biotin nick end labelling (TUNEL)-labelling (a potential marker for apoptosis), however, their presence was not predicted by number of neurons stained for SEK1p or c-Junp. These results suggest that the expected activation of the JNK pathway by p75NGFR, as well as the expected relationship between SEK1 and downstream activation of c-Jun do not occur in the mammalian forebrain. Also, these results suggest that this activation does not necessarily lead to cell death.


Subject(s)
MAP Kinase Kinase 4 , Mitogen-Activated Protein Kinase Kinases/metabolism , NF-kappa B/metabolism , Neurons/metabolism , Proto-Oncogene Proteins c-jun/metabolism , Receptor, Nerve Growth Factor/genetics , Age Factors , Animals , Antibodies , Axotomy , Cell Death/physiology , Choline O-Acetyltransferase/metabolism , Cholinergic Fibers/chemistry , Cholinergic Fibers/enzymology , DNA Fragmentation , Denervation , Hippocampus/cytology , Hippocampus/growth & development , In Situ Nick-End Labeling , Male , Mice , Mice, Inbred BALB C , Mice, Knockout , Mitogen-Activated Protein Kinase Kinases/analysis , Mitogen-Activated Protein Kinase Kinases/immunology , Nerve Degeneration/metabolism , Prosencephalon/cytology , Prosencephalon/growth & development , Septal Nuclei/cytology , Septal Nuclei/growth & development , Septal Nuclei/surgery , Signal Transduction/physiology
8.
Neurobiol Aging ; 21(1): 125-34, 2000.
Article in English | MEDLINE | ID: mdl-10794857

ABSTRACT

Cholinergic medial septum neurons express TrkA and p75 nerve growth factor receptor (p75(NGFR)) and interactions between TrkA and p75(NGFR) are necessary for high-affinity binding and signaling of nerve growth factor (NGF) through TrkA. In adult p75(NGFR)-deficient (-/-) mice, retrograde transport of NGF and other neurotrophins by these neurons is greatly reduced, however, these neurons maintain their cholinergic phenotype and size. Reduced transport of NGF has been proposed to play a role in Alzheimer's disease. Here, we investigated whether chronic and long-term absence of p75(NGFR) (and possibly reduced NGF transport and TrkA binding) would affect the cholinergic septohippocampal system during aging in mice. In young (6-8 months), middle aged (12-18 months), and aged (19-23 months) 129/Sv control mice the total number of choline acetyltransferase-positive medial septum neurons and the mean diameter and cross sectional area of the cholinergic cell bodies were similar. The cholinergic hippocampal innervation, as measured by the density of acetylcholinesterase-positive fibers in the outer molecular layer of the dentate gyrus was also similar across all ages. These parameters also did not change during aging in p75(NGFR) -/- mice and the number and size of the choline acetyltransferase-positive neurons and the cholinergic innervation density were largely similar as in control mice at all ages. These results suggest that p75(NGFR) does not play a major role in the maintenance of the number or morphology of the cholinergic basal forebrain neurons during aging of these mice. Alternatively, p75(NGFR) -/- mice may have developed compensatory mechanisms in response to the absence of p75(NGFR).


Subject(s)
Aging/physiology , Choline O-Acetyltransferase/metabolism , Neurons/cytology , Receptor, Nerve Growth Factor/genetics , Septal Nuclei/cytology , Septal Nuclei/enzymology , Acetylcholinesterase/metabolism , Animals , Cell Count , Cell Size/genetics , Dentate Gyrus/cytology , Dentate Gyrus/enzymology , Female , Male , Mice , Mice, Inbred Strains , Mice, Knockout , Neurons/enzymology , Receptor, Nerve Growth Factor/deficiency , Sex Factors
9.
Exp Neurol ; 162(2): 297-310, 2000 Apr.
Article in English | MEDLINE | ID: mdl-10739636

ABSTRACT

Neurotrophins regulate survival, neurite outgrowth, and phenotypic maturation of developing neurons. Brain-derived neurotrophic factor (BDNF) can promote the survival of developing cholinergic forebrain neurons in vitro and reduce their degeneration following injury in adult rats. We investigated the role of endogenous BDNF during postnatal development of these cholinergic neurons by analyzing homozygous BDNF-deficient (-/-) mice and their littermates (+/+, +/-). At P6, the number of choline acetyltransferase- (ChAT) positive neurons in the medial septum was approximately 23% lower in BDNF-/- mice, although their brain and body weight was normal. At P15, control (+/+) littermates had approximately 45% more and approximately 45% larger ChAT-positive neurons and a much denser cholinergic hippocampal innervation than at P6, indicative of maturation of the septohippocampal system. In BDNF-/- mice, the number, size, and ChAT-immunostaining intensity of the cholinergic neurons remained the same between P6 and P15 (few mice survive longer). BDNF-/- mice had about three times more TUNEL-labeled (a marker of apoptosis) cells in the medial septum at P6, consistent with (but not proof of) the possibility that the cholinergic neurons were dying. The cholinergic hippocampal innervation in BDNF-/- mice expanded to a lesser extent than in controls and had reduced levels of acetylcholinesterase staining at P15. The developmental deficits were largely similar in the neostriatum of BDNF-/- mice. These findings suggest that BDNF is critical for postnatal development and maturation of cholinergic forebrain neurons.


Subject(s)
Brain-Derived Neurotrophic Factor/metabolism , Neostriatum/growth & development , Neurons/cytology , Neurons/enzymology , Septum of Brain/growth & development , Acetylcholine/metabolism , Animals , Apoptosis , Body Weight , Brain-Derived Neurotrophic Factor/pharmacology , Cell Count/drug effects , Choline O-Acetyltransferase/metabolism , Heterozygote , Hippocampus/cytology , Hippocampus/drug effects , Hippocampus/enzymology , Hippocampus/growth & development , Homozygote , In Situ Nick-End Labeling , Mice , Mice, Knockout , Neostriatum/cytology , Neostriatum/drug effects , Neostriatum/enzymology , Nerve Fibers/drug effects , Nerve Fibers/enzymology , Neurons/drug effects , Septum of Brain/cytology , Septum of Brain/drug effects , Septum of Brain/enzymology
10.
Int J Syst Evol Microbiol ; 50 Pt 6: 1965-1972, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11155969

ABSTRACT

Almost complete 23S rRNA gene sequences were obtained from 13 planctomycete strains, the fimbriated, prosthecate bacterium Verrucomicrobium spinosum and two strains of the genus Prosthecobacter. The 23S rRNA genes were amplified by the PCR, using modified primers. The majority of the planctomycete strains investigated were shown to have 23S rRNA genes that were not linked to the 16S rRNA genes. Amplification of the 5'-termini of these genes was achieved using a novel primer-design strategy. Comparative phylogenetic analyses were performed using the 23S rRNA gene sequences determined in this study and previously determined 16S rRNA gene sequences. The phylogenetic dendrograms constructed from both datasets showed that the planctomycetes form a coherent group and distinct lineage within the domain Bacteria. Analysis of 23S rRNA gene sequences of Verrucomicrobium spinosum, Prosthecobacter fusiformis and Prosthecobacter sp. strain FC-2 showed that these organisms cluster together, as was also shown here and previously by analysis of 16S rRNA gene sequences. The distinct phylogenetic position of the division Verrucomicrobia was also supported by analysis of the 23S rRNA gene sequences, and no statistically significant phylogenetic relationship between the division Verrucomicrobia and the planctomycetes was found. The analyses presented in this study also provide further evidence that the chlamydiae are no more related to members of the order Planctomycetales and the division Verrucomicrobia than they are to members of other bacterial lineages.


Subject(s)
Bacteria/classification , Genes, rRNA , Phylogeny , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 23S/genetics , Bacteria/genetics , Base Sequence , DNA, Bacterial/analysis , DNA, Bacterial/genetics , DNA, Ribosomal/analysis , DNA, Ribosomal/genetics , Gene Deletion , Polymerase Chain Reaction , Sequence Alignment , Sequence Analysis, DNA
11.
Brain Res Dev Brain Res ; 118(1-2): 79-91, 1999 Dec 10.
Article in English | MEDLINE | ID: mdl-10611506

ABSTRACT

The low-affinity nerve growth factor receptor (p75(NGFR)) apparently can mediate apoptosis in a variety of cells in vitro and in vivo. Previously, our laboratory suggested that p75(NGFR) induced apoptosis in a subpopulation of cholinergic forebrain neurons during postnatal development, i.e., the number of choline acetyltransferase (ChAT)-positive neurons in a control strain of mice decreased whereas it remained higher in p75(NGFR)-deficient (-/-) mice. Discrepancies with subsequent data sets in our laboratory caused us to thoroughly re-analyze the fate of these cholinergic medial septum and neostriatal neurons in new sets of p75(NGFR) -/- and two DNA control strains of mice during development. Between postnatal day (P)6 and P15 the number of ChAT-positive neurons detected in the medial septum of 129/Sv mice and Balb/c mice increased by approximately 64% and approximately 62%, respectively. This increase is contrary to previous reports from our laboratory and indicative of normal postnatal development (including an increase in ChAT-enzyme) of the cholinergic forebrain neurons. In p75(NGFR) -/- mice the number of ChAT-positive neurons in the medial septum remained constant between P6 and P15 and was approximately 31% and approximately 56% higher at P6 than 129/Sv and Balb/c mice, respectively. At P15 and adulthood, p75(NGFR) -/- mice had similar numbers of cholinergic neurons as control mice. In the developing neostriatum, the number of ChAT-positive neurons increased by approximately 56% between P6 and P15 and did not differ between p75(NGFR) -/- and control mice at any time. Analyses for apoptotic DNA fragmentation (TUNEL labeling) at P8 revealed no differences between p75(NGFR) -/- and control mice in 12 forebrain regions, including the septum and neostriatum. At all times, all mice had similar levels of acetylcholinesterase-positive cholinergic innervation of the molecular layer in the dorsal dentate gyrus. These findings suggest that the p75(NGFR) does not necessarily mediate apoptosis in medial septum or neostriatal cholinergic neurons during the postnatal time period. The discrepant results of the previous study are most likely due to a less rigorous application of criteria for data acquisition, including anatomical boundaries that define the nucleus.


Subject(s)
Aging/metabolism , Animals, Newborn/metabolism , Choline O-Acetyltransferase/metabolism , Neurons/metabolism , Prosencephalon/metabolism , Receptor, Nerve Growth Factor/metabolism , Animals , Animals, Newborn/growth & development , Cell Count , Cell Size , Dentate Gyrus/cytology , Dentate Gyrus/enzymology , In Situ Nick-End Labeling , Mice , Mice, Knockout/genetics , Mice, Knockout/metabolism , Neostriatum/cytology , Neostriatum/metabolism , Neurons/cytology , Prosencephalon/cytology , Prosencephalon/growth & development , Receptor, Nerve Growth Factor/deficiency , Receptor, Nerve Growth Factor/genetics , Reference Values , Septum Pellucidum/cytology , Septum Pellucidum/metabolism
12.
J Bacteriol ; 175(15): 4772-9, 1993 Aug.
Article in English | MEDLINE | ID: mdl-7687600

ABSTRACT

Small subunit rDNA sequences were determined for 20 species of the genera Acetogenium, Clostridium, Thermoanaerobacter, Thermoanaerobacterium, Thermoanaerobium, and Thermobacteroides, 3 non-validly described species, and 5 isolates of anaerobic thermophilic bacteria, providing a basis for a phylogenetic analysis of these organisms. Several species contain a version of the molecule significantly longer than that of Escherichia coli because of the presence of inserts. On the basis of normal evolutionary distances, the phylogenetic tree indicates that all bacteria investigated in this study with a maximum growth temperature above 65 degrees C form a supercluster within the subphylum of gram-positive bacteria that also contains Clostridium thermosaccharolyticum and Clostridium thermoaceticum, which have been previously sequenced. This supercluster appears to be equivalent in its phylogenetic depth to the supercluster of mesophilic clostridia and their nonspore-forming relatives. Several phylogenetically and phenotypically coherent clusters that are defined by sets of signature nucleotides emerge within the supercluster of thermophiles. Clostridium thermobutyricum and Clostridium thermopalmarium are members of Clostridium group I. A phylogenetic tree derived from transversion distances demonstrated the artificial clustering of some organisms with high rDNA G+C moles percent, i.e., Clostridium fervidus and the thermophilic, cellulolytic members of the genus Clostridium. The results of this study can be used as an aid for future taxonomic restructuring of anaerobic sporogenous and asporogenous thermophillic, gram-positive bacteria.


Subject(s)
Bacteria, Anaerobic/classification , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Bacteria, Anaerobic/genetics , Phylogeny , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics
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