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2.
Genet Mol Res ; 14(3): 7556-66, 2015 Jul 06.
Article in English | MEDLINE | ID: mdl-26214434

ABSTRACT

We examined the genetic diversity of 10 wild species (populations) and 55 varieties of tree peony using inter-primer binding site (iPBS) markers. From a total of 36 iPBS primers, 16 were selected based on polymorphic amplification. The number of bands amplified by each primer ranged from 9 to 19, with an average of 12.88 bands per primer. The length of bands ranged from 100 to 2000 bp, concentrated at 200 to 1800 bp. Sixteen primers amplified 206 bands in total, of which 173 bands were polymorphic with a polymorphism ratio of 83.98%. Each primer amplified 10.81 polymorphic bands on average. The data were then used to construct a phylogenetic tree using unweighted pair group method with arithmetic mean methods. Clustering analysis showed that the genetic relationships among the varieties were not only related to the genetic background or geographic origin, but also to the flowering phase, flower color, and flower type. Our data also indicated that iPBS markers were useful tools for classifying tree peony germplasms and for tree peony breeding, and the specific bands were helpful for molecular identification of tree peony varieties.


Subject(s)
DNA Primers/metabolism , Genetic Variation , Paeonia/genetics , Trees/genetics , Binding Sites , Electrophoresis, Agar Gel , Genetic Markers , Phylogeny , Principal Component Analysis , Seeds/genetics
3.
J Appl Microbiol ; 108(3): 898-907, 2010 Mar.
Article in English | MEDLINE | ID: mdl-19709338

ABSTRACT

AIMS: The purpose of this study was to provide micrographic evidences for the damaged membrane structure and intracellular structure change of Escherichia coli strain 8099, induced by polyhexamethylene guanidine hydrochloride (PHMG). METHODS AND RESULTS: The bactericidal effect of PHMG on E. coli was investigated based on beta-galactosidase activity assay, fluorescein-5-isothiocyanate confocal laser scanning microscopy, field emission scanning electron microscopy and transmission electron microscopy. The results revealed that a low dose (13 microg ml(-1)) of PHMG slightly damaged the outer membrane structure of the treated bacteria and increased the permeability of the cytoplasmic membrane, while no significant damage was observed to the morphological structure of the cells. A high dose (23 microg ml(-1)) of PHMG collapsed the outer membrane structure, led to the formation of a local membrane pore across the membrane and badly damaged the internal structure of the cells. Subsequently, intracellular components were leaked followed by cell inactivation. CONCLUSIONS: Dose-dependent membrane disruption was the main bactericidal mechanism of PHMG. The formation of the local membrane pores was probable after exposure to a high dose (23 microg ml(-1)) of PHMG. Micrographic evidences were provided about the damaged membrane structure and intracellular structure change of E. coli. SIGNIFICANCE AND IMPACT OF THE STUDY: The presented information helps understand the bactericidal mechanism of PHMG by membrane damage.


Subject(s)
Cell Membrane/ultrastructure , Escherichia coli/drug effects , Escherichia coli/ultrastructure , Guanidines/pharmacology , Anti-Bacterial Agents/pharmacology , Cell Membrane/drug effects , Cell Membrane Permeability/drug effects , Dose-Response Relationship, Drug , Microscopy, Confocal , Microscopy, Electron, Scanning , Microscopy, Electron, Transmission , beta-Galactosidase/metabolism
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