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1.
J Agric Food Chem ; 72(13): 7457-7463, 2024 Apr 03.
Article in English | MEDLINE | ID: mdl-38527909

ABSTRACT

The discovery of a lead compound is fundamental to herbicide innovation, but the limited availability of valuable lead compounds has hindered their development in recent years. By utilizing the structural diversity-oriented inactive group strategy, 3-(2-pyridyl)-benzothiazol-2-one was identified as a promising lead scaffold for herbicides, starting from benzothiazole which is an inactive moiety commonly found in herbicides such as mefenacet, benazolin, benzthiazuron, and fenthiaprop-ethyl. To investigate the structure-activity relationship (SAR) of these chemicals, a series of 2-(2-oxo-3-pyridyl-benzothiazol-6-yloxy)hexanoic acid derivatives (VI01 ∼ VI28) were synthesized through classical nucleophilic SNAr reaction using halogenated pyridines and 6-methoxybenzothiazole-2-one. The chemical structures of all the title compounds were confirmed by NMR and MS analysis. Petri dish assays indicated that many compounds exhibited potent herbicidal activity against both broad-leaf weeds and grass weeds at 1.0 mg/L. The SAR analysis revealed that the presence of a trifluoromethyl group at the 5-position of pyridine is essential for herbicidal activity. Furthermore, carboxylic esters exhibit higher herbicidal activity compared to carboxylic amides and free acids, and the activity decreased with the extension of the carbon chain. The postemergence herbicidal activity of VI03 against 16 species of weeds was tested by pot experiments in a greenhouse. VI03 demonstrated comparable efficacy in controlling broadleaf weeds and superior efficacy in controlling grass weeds compared to carfentrazone ethyl. The present study has unveiled a novel molecular scaffold exhibiting remarkably potent herbicidal activity. These findings are anticipated to provide valuable insights for the advancement of new herbicides and offer an alternative approach for managing resistant weeds.


Subject(s)
Herbicides , Herbicides/chemistry , Caproates , Structure-Activity Relationship , Plant Weeds , Poaceae
2.
Pest Manag Sci ; 80(7): 3269-3277, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38363171

ABSTRACT

BACKGROUND: In pesticide research, bleaching herbicides have always been a hot topic. Our previous research showed that N-(4-fluorobenzyl)-2-methoxybenzamide is an innovative lead compound for bleaching herbicides. RESULTS: A total of 40 derivatives of picolinamides were prepared and evaluated for their herbicidal activity by Petri dish tests and postemergence trials. The structure-activity relationship (SAR) revealed that introducing electron-withdrawing groups at the 3- or 4-positions of the benzyl significantly enhances herbicidal activity. Furthermore, ZI-04 induced similar symptoms such as bleaching effect in treated weeds and accumulation of biosynthetic precursors for carotenoids as observed with diflufenican. ZI-04 also exhibited significant cross-resistance to diflufenican and had a lower resistance risk than diflufenican. CONCLUSION: N-benzyl-6-methylpicolinamides were discovered as a novel scaffold for bleaching herbicides. The accumulation of phytoene, phytofluene and ζ-Carotene in radish cotyledons, and cross-resistance observed with diflufenican, showed that title compounds can interfere with carotenoid biosynthesis. © 2024 Society of Chemical Industry.


Subject(s)
Herbicides , Picolinic Acids , Herbicides/pharmacology , Herbicides/chemistry , Picolinic Acids/chemistry , Picolinic Acids/pharmacology , Structure-Activity Relationship , Plant Weeds/drug effects , Amides/chemistry , Amides/pharmacology
3.
Pest Manag Sci ; 80(6): 2639-2646, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38288581

ABSTRACT

BACKGROUND: The discovery of lead compounds is fundamental to herbicide innovation, yet the limited availability of valuable lead compounds has impeded their progress in recent years. The study presents a novel molecular scaffold that exhibits remarkably potent herbicidal activity. RESULTS: Through a scaffold-hopping strategy, a highly potent lead compound for herbicides, namely 3-(2-pyridinyl)-benzothiazol-2-one, was unexpectedly discovered during attempts to structurally modify haloxyfop, a commercial aryl-oxy-phenoxy-propionate herbicide. To investigate the structure-activity relationship (SAR) of the newly discovered herbicidal chemicals, a series of 2-(2-oxo-3-(pyridin-2-yl)-2,3-dihydrobenzo[d]thiazol-6-yloxy)propanoic acid derivatives, I-01 ~ I-27, were designed and synthesized. SAR analysis revealed that trifluoromethyl at the 5-position of pyridine is crucial for herbicidal activity, whereas additional fluorine or Cl atom at the 3-position of pyridine significantly enhances activity. Carboxylic ester derivatives exhibit superior herbicidal activity compared with amide derivatives. Moreover, the activity of carboxylic ester derivatives decreases with C chain extension, but the introduction of O atoms in the side chain benefits activity enhancement. Pot experiments conducted in a glasshouse demonstrated that I-01 and I-09 exhibited potent postemergence herbicidal activity against broadleaf weeds, and completely inhibited growth of Amaranthus retroflex, Abutilon theophrasti and Portulaca oleracea at a dosage of 75 g ha-1. CONCLUSION: Despite the initial goal of scaffold-hopping not being achieved, we have successfully identified a novel molecular scaffold exhibiting exceptional herbicidal activity, thereby presenting innovative prospects for herbicide development. © 2024 Society of Chemical Industry.


Subject(s)
Herbicides , Plant Weeds , Herbicides/pharmacology , Herbicides/chemical synthesis , Herbicides/chemistry , Structure-Activity Relationship , Plant Weeds/drug effects , Propionates/pharmacology , Propionates/chemical synthesis , Propionates/chemistry
4.
Vet Microbiol ; 288: 109943, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38113574

ABSTRACT

O-acetyl-homoserine sulfhydrylase (OAHS) is a pyridoxal 5'-phosphate-dependent enzyme involved in microbial methionine biosynthesis, which catalyzes the conversion of o-acetyl-homoserine (OAH) to homocysteine. In our previous study, we found that OAHS of Streptococcus suis serotype 2 (SS2) can interact with the porcine blood-brain barrier (BBB) model, but whether OAHS regulates the penetration of BBB during SS2 infection is still unclear. To explore the role of OAHS in SS2 infection, OAHS-deficient SS2 mutant strain (SC19-ΔOAHS) and gene complemental strain (SC19-cΔOAHS) were constructed. Compared to the parent strain, with the loss of oahs, the chain length of SC19-ΔOAHS was shortened, the virulence was significantly reduced, the survival rate of mice infected with SC19-ΔOAHS was obviously increased accompanied by the relieved clinical symptoms. And the survival ability of SC19-ΔOAHS in whole blood was also remarkably decreased. Interestingly, the adhesion of SC19-ΔOAHS to endothelial cells was markedly increased, but the deficiency of OAHS significantly inhibited the strain penetrating BBB both in vivo and in vitro. Most of these phenomena can be reversed by the complemental strain (SC19-cΔOAHS). Further study showed that the deficiency of OAHS severely reduced SC19-induced endothelial cell apoptosis, tight junctions (TJs) protein impairment and the expression of SS2 virulence factor Enolase (Eno), involved in the destruction of BBB. Additionally, SC19-ΔOAHS immunized mice were able to resist SC19 or JZLQ022 infection. In conclusion, we confirmed that OAHS promoted the pathogenicity by enhancing host's BBB permeability and immune escape, and SC19- ΔOAHS is a potential live vaccine.


Subject(s)
Streptococcal Infections , Streptococcus suis , Swine Diseases , Animals , Mice , Endothelial Cells , Homoserine/genetics , Serogroup , Streptococcal Infections/veterinary , Swine , Swine Diseases/metabolism , Virulence
5.
Pest Manag Sci ; 79(12): 5087-5095, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37559430

ABSTRACT

BACKGROUND: Previously, the herbicidal activity of N-benzyl-2-methoxybenzamides was discovered during a random screening program in our laboratory. The chemicals resulted in bleaching effect of newly grown leaves by interfering with the biosynthesis of ß-carotene in plant. RESULTS: A total of 28 benzamides were synthesized and subjected for the evaluation of herbicidal activity. Structure-activity relationship (SAR) showed that introducing propargyloxy group at 5-position of benzoyl-benzene ring and fluorine or methyl group at 3- or 4-position of benzyl-benzene ring is beneficial for the activity. Post-emergence herbicidal activities of compounds 406 and 412 were comparable to those of mesotrione and diflufenican. Studies on MOA showed that 406 decreased the level of both ß-carotene and plastoquinone (PQ) in treated plants. The bleaching effect in green alga caused by 406 could be reversed by supplying exogenous homogentisic acid (HGA), the precursor of plastoquinone. CONCLUSION: N-benzyl-2-methoxy-5-propargyloxybenzoamides were discovered as new candidates for bleaching herbicides. Preliminary investigation on mechanism of action (MOA) showed that the title compounds might indirectly interfere with carotenoid biosynthesis by blocking the production of PQ. © 2023 Society of Chemical Industry.


Subject(s)
Herbicides , Herbicides/chemistry , Plastoquinone , beta Carotene , Benzene , Plants , Structure-Activity Relationship
6.
Front Microbiol ; 14: 1329609, 2023.
Article in English | MEDLINE | ID: mdl-38260894

ABSTRACT

Introduction: Klebsiella pneumoniae (K. pneumoniae) is an important opportunistic and zoonotic pathogen which is associated with many diseases in humans and animals. However, the pathogenicity of K. pneumoniae has been neglected and the prevalence of K. pneumoniae is poorly studied due to the lack of rapid and sensitive diagnosis techniques. Methods: In this study, we infected mice and pigs with K. pneumoniae strain from a human patient. An indirect ELISA was established using the KHE protein as the coating protein for the detection of K. pneumoniae specific antibody in clinical samples. A nested PCR method to detect nuclei acids of K. pneumoniae was also developed. Results: We showed that infection with K. pneumoniae strain from a human patient led to mild lung injury of pigs. For the ELISA, the optimal coating concentration of KHE protein was 10 µg/mL. The optimal dilutions of serum samples and secondary antibody were 1:100 and 1:2500, respectively. The analytical sensitivity was 1:800, with no cross-reaction between the coated antigen and porcine serum positive for antibodies against other bacteria. The intra-assay and inter-assay reproducibility coefficients of variation are less than 10%. Detection of 920 clinical porcine serum samples revealed a high K. pneumoniae infection rate by established indirect ELISA (27.28%) and nested PCR (19.13%). Moreover, correlation analysis demonstrated infection rate is positively correlated with gross population, Gross Domestic Product (GDP), and domestic tourists. Discussion: In conclusion, K. pneumoniae is highly prevalent among pigs in China. Our study highlights the role of K. pneumoniae in pig health, which provides a reference for the prevention and control of diseases associated with K. pneumoniae.

7.
Pestic Biochem Physiol ; 188: 105246, 2022 Nov.
Article in English | MEDLINE | ID: mdl-36464333

ABSTRACT

Highly active and novel antifungal compounds are continuously researched from natural products for pesticide development. Picrasma quassioides (D. Don) Benn, a species of Simaroubaceae, is used in traditional Chinese medicine to treat colds and upper respiratory infections. In this study, the active ingredients of P. quassioides and their antifungal activities against plant pathogenic fungi are investigated to explore the practical application of the plant in the agricultural field. The results showed that the extracts of P. quassioides exhibited highly significant preventive and curative effects on apple valsa canker (AVC) with a reduction of lesion diameter were 80.28% and 83.63%, respectively, and can improve the resistance of apple trees to a pathogen. Five antifungal compounds, namely, canthin-6-one (T1), nigakinone (T2), 4,5-dimethoxycanthin-6-one (T3), 1-methoxycarbonyl-ß-carboline (T4), and 1-methoxycarbonyl-3-methoxyl-ß-carboline (T5), are isolated from P. quassioides using the bioassay-guided method. This is the first report of 1-methoxycarbonyl-3-methoxyl-ß-carboline as a natural product. Canthin-6-one shows strong in vitro inhibitory activity against 11 species of plant pathogenic fungi, and their EC50 values range from 1.49 to 8.80 mg/L. The control efficacy of canthin-6-one at 2000 mg/L are 87.88% and 94.37% against AVC and 80.10% and 84.73% against apple anthracnose (C. gloeosporioides), respectively. Additionally, V. mali is observed after treatment with cannin-6-one, although microscopic. This is the first study on the control of the secondary metabolites of P. quassioides against plant fungal diseases. The results show that P. quassioides is a potential resource for the development of botanical fungicides.


Subject(s)
Alkaloids , Antineoplastic Agents , Biological Products , Malus , Picrasma , Antifungal Agents/pharmacology , Fungi , Carbolines
8.
Vet Res ; 53(1): 89, 2022 Oct 28.
Article in English | MEDLINE | ID: mdl-36307867

ABSTRACT

Peste des petits ruminants (PPR) is an acute and highly contagious disease and has long been a significant threat to small ruminant productivity worldwide. However, the molecular mechanism underlying host-PPRV interactions remains unclear and the long noncoding RNAs (lncRNAs) regulation of PPR virus (PPRV) infection has rarely been reported so far. Here, we first demonstrated that PPRV infection can induce an obvious innate immune response in caprine endometrial epithelial cells (EECs) at 48 h post-infection (hpi) with an MOI of 3. Subsequently, we determined that PPRV infection is associated with 191 significantly differentially expressed (SDE) lncRNAs, namely, 137 upregulated and 54 downregulated lncRNAs, in caprine EECs compared with mock control cells at 48 hpi by using deep sequencing technology. Importantly, bioinformatics preliminarily analyses revealed that these DE lncRNAs were closely related to the immune response. Furthermore, we identified a system of lncRNAs related to the immune response and focused on the role of lncRNA 10636385 (IRF1-AS) in regulating the innate immune response. Interestingly, we found that IRF1-AS was a potent positive regulator of IFN-ß and ISG production, which can significantly inhibit PPRV replication in host cells. In addition, our data revealed that IRF1-AS was positively correlated with its potential target gene, IRF1, which enhanced the activation of IRF3 and the expression of ISGs and interacted with IRF3. This study suggests that IRF1-AS could be a new host factor target for developing antiviral therapies against PPRV infection.


Subject(s)
Goat Diseases , Peste-des-Petits-Ruminants , Peste-des-petits-ruminants virus , RNA, Long Noncoding , Animals , Peste-des-Petits-Ruminants/genetics , RNA, Long Noncoding/genetics , Goats/genetics , Peste-des-petits-ruminants virus/physiology , Interferon-beta
9.
Neural Netw ; 155: 340-347, 2022 Nov.
Article in English | MEDLINE | ID: mdl-36113341

ABSTRACT

Extractive document summarization is a fundamental task in natural language processing (NLP). Recently, several Graph Neural Networks (GNNs) are proposed for this task. However, most existing GNN-based models can neither effectively encode semantic nodes of multiple granularity level apart from sentences nor substantially capture different cross-sentence meta-paths. To address these issues, we propose MHgatSum, a novel Multi-granularity Heterogeneous Graph ATtention networks for extractive document SUMmarization. Specifically, we first build a multi-granularity heterogeneous graph (HetG) for each document, which is better to represent the semantic meaning of the document. The HetG contains not only sentence nodes but also multiple other granularity effective semantic units with different semantic levels, including keyphrases and topics. These additional nodes act as the intermediary between sentences to build the meta-paths involved in sentence node (i.e., Sentence-Keyphrase-Sentence and Sentence-Topic-Sentence). Then, we propose a heterogeneous graph attention networks to embed the constructed HetG for extractive summarization, which enjoys multi-granularity semantic representations. The model is based on a hierarchical attention mechanism, including node-level and semantic-level attentions. The node-level attention can learn the importance between a node and its meta-path based neighbors, while the semantic-level attention is able to learn the importance of different meta-paths. Moreover, to better integrate sentence global knowledge, we further incorporate sentence node global importance in local node-level attention. We conduct empirical experiments on two benchmark datasets, which demonstrates the superiority of MHgatSum over previous SOTA models on the task of extractive summarization.


Subject(s)
Natural Language Processing , Semantics , Neural Networks, Computer , Language
10.
Sensors (Basel) ; 22(18)2022 Sep 19.
Article in English | MEDLINE | ID: mdl-36146435

ABSTRACT

Detecting high-speed and maneuvering targets is challenging in early warning radar applications. Modern early warning radar has many functions such as detection, tracking, imaging, and recognition which need a high signal-to-noise ratio (SNR). Thus, long-time coherent integration is a necessary method to realize high SNR requirements. However, high-speed and maneuverable motion cause range and Doppler migration, which brings about serious coherent integration loss. Traditional integration methods usually have the drawbacks of model mismatching and high computational complexity. This paper establishes a novel long coherent processing interval (CPI) integration algorithm that detects maneuvering and weak targets which have a low reflection cross-section (RCS) and low echo SNR. The range and Doppler migration problems are solved via a layer integration by blending the association in a tracking-before-detection (TBD) technique. Compact SNR gain is achieved with a target information transmission mechanism and an updated constant false alarm ratio (CFAR) threshold. The algorithm is applicable in multiple target scenarios by considering different velocity ambiguities and maneuvers. A simulation and real-measured experiments confirm the effectiveness of the algorithm.

11.
Entropy (Basel) ; 24(7)2022 Jul 11.
Article in English | MEDLINE | ID: mdl-35885187

ABSTRACT

Fine-grained entity typing (FET) aims to identify the semantic type of an entity in a plain text, which is a significant task for downstream natural language processing applications. However, most existing methods neglect rich known typing information about these entities in knowledge graphs. To address this issue, we take advantage of knowledge graphs to improve fine-grained entity typing through the use of a copy mechanism. Specifically, we propose a novel deep neural model called CopyFet for FET via a copy-generation mechanism. CopyFet can integrate two operations: (i) the regular way of making type inference from the whole type set in the generation model; (ii) the new copy mechanism which can identify the semantic type of a mention with reference to the type-copying vocabulary from a knowledge graph in the copy model. Despite its simplicity, this mechanism proves to be powerful since extensive experiments show that CopyFet outperforms state-of-the-art methods in FET on two benchmark datasets (FIGER (GOLD) and BBN). For example, CopyFet achieves the new state-of-the-art score of 76.4% and 83.6% on the accuracy metric in FIGER (GOLD) and BBN, respectively.

12.
Vet Microbiol ; 270: 109451, 2022 Jul.
Article in English | MEDLINE | ID: mdl-35594636

ABSTRACT

Peste des petits ruminants virus (PPRV) has long been a significant threat to small ruminant productivity worldwide. Virus infection-induced endoplasmic reticulum (ER) stress (ERS) and the subsequently activated unfolded protein response (UPR) play significant roles in viral replication and pathogenesis. However, the relationship between ERS and PPRV infection is unknown. In this study, we demonstrated that ERS was induced during PPRV infection in caprine endometrial epithelial cells (EECs). Importantly, we demonstrated that the induction of autophagy by PPRV was mediated by ERS. Furthermore, we found that the PERK/eIF2α pathway but not the ATF6 or IRE1 pathway was activated and that the activated PERK/eIF2α pathway participated in regulating ERS-mediated autophagy. Moreover, virus replication was required for PPRV infection-induced ERS-mediated autophagy and PERK pathway activation. Additionally, we revealed that either the viral nucleocapsid (N) or nonstructural protein C was sufficient to elicit ERS and activate the PERK/eIF2α pathway, which further increased autophagy. Taken together, these results suggest that PPRV N and C protein-induced autophagy enhances viral replication through the induction of ERS and that the PERK pathway may be involved in the activation of ERS-mediated autophagy during PPRV infection.


Subject(s)
Goat Diseases , Peste-des-Petits-Ruminants , Peste-des-petits-ruminants virus , Animals , Autophagy , DNA Viruses , Eukaryotic Initiation Factor-2 , Goats , Peste-des-petits-ruminants virus/physiology , Ruminants , Virus Replication/physiology
13.
Pest Manag Sci ; 77(6): 2804-2811, 2021 Jun.
Article in English | MEDLINE | ID: mdl-33522122

ABSTRACT

BACKGROUND: Herbicides acting on biosynthesis of plant pigments have contributed greatly to weed control in recent years. In our previous studies, 2-methoxybenzamides were discovered as a novel type of lead compound for the development of bleaching herbicides. RESULTS: A total of 67 benzamide analogues were synthesized and evaluated for herbicidal activity. The structure-activity relationship (SAR) revealed that a methoxyl substitution at the 2-position of the benzoyl moiety is essential for the herbicidal activity of benzamide derivatives, and introduction of small substituents at the meta- or para-position of the benzylamine moiety is also beneficial. Compounds 4, 43 and 44 showed 100% inhibition against Abutilon theophrasti and Amaranthus retroflexus at an application rate of 150 g a.i. ha-1 . CONCLUSION: The relationship between the structure and herbicidal activity of 2-methoxybenzamides was discussed intensively. Compounds 4, 43 and 44 may serve as novel candidates with a bleaching effect. © 2021 Society of Chemical Industry.


Subject(s)
Amaranthus , Herbicides , Herbicides/pharmacology , Plant Weeds , Structure-Activity Relationship , Weed Control
14.
J Virol ; 95(10)2021 03 10.
Article in English | MEDLINE | ID: mdl-33504605

ABSTRACT

Peste des petits ruminants virus (PPRV) is an important pathogen that seriously influences the productivity of small ruminants worldwide. PPRV has evolved several mechanisms to evade IFN-I responses. We report that a novel microRNA in goat PBMCs, novel miR-3, was upregulated by PPRV to facilitate virus infection. Furthermore, PPRV V protein alone was sufficient to induce novel miR-3 expression, and NF-κB and p38 pathway may involved in the induction of novel miR-3 during PPRV infection. Importantly, we demonstrated that novel miR-3 was a potent negative regulator of IFN-α production by targeting IRAK1, which resulted in the enhancement of PPRV infection. In addition, we found that PPRV infection can activated ISGs through IFN independent and IRF3 dependent pathway. Moreover, our data revealed that novel miR-3 mediated regulation of IFN-α production may involve in the differential susceptibility between goat and sheep to PPRV. Taken together, our findings identified a new strategy taken by PPRV to escape IFN-I-mediated antiviral immune responses by engaging cellular microRNA and, thus, improve our understanding of its pathogenesis.IMPORTANCE: Peste des petits ruminants virus (PPRV) induce in the hosts a transient but severe immunosuppression, which threatens both small livestock and endangered susceptible wildlife populations in many countries. Despite extensive research has been explored, the mechanism underlying PPRV immune system evasion remains elusive. Our data provided the first direct evidence that novel microRNA-3 (novel miR-3) feedback inhibits type I IFN signaling when goat PBMCs are infected with PPRV vaccine strain N75/1, thus promoting the infection. In this study, the target of novel miR-3, IRAK1, which are important for PPRV-induced type I IFN production, have also been found. Moreover, we identified NF-κB and p38 pathways may involve in novel miR-3 induction in response to PPRV infection. Taken together, our research has provided new insight into understanding the effects of miRNA on host-virus interactions, and revealed a potential therapeutic target for antiviral intervention.

15.
J Agric Food Chem ; 68(51): 15107-15114, 2020 Dec 23.
Article in English | MEDLINE | ID: mdl-33301336

ABSTRACT

Based on the structures of isoxaflutole (IFT) and N-isobutyl-N-(4-chloro-benzyl)-4-chloro-2-pentenamide, a series of N-benzyl-5-cyclopropyl-isoxazole-4-carboxamides was designed by connecting their pharmacophores (i.e., a multitarget drug design strategy). A total of 27 N-benzyl-5-cyclopropyl-isoxazole-4-carboxamides were prepared from 5-cyclopropylisoxazole-4-carboxylic acid and substituted benzylamines, and their structures were confirmed by NMR and MS. Laboratory bioassays indicated that I-26 showed 100% inhibition against Portulaca oleracea and Abutilon theophrasti at a concentration of 10 mg/L, better than the positive control butachlor (50% inhibition for both weeds). A strong growth inhibition was observed, but a typical bleaching phenomenon of IFT could not be observed in the Petri dish assay. I-05 displayed excellent postemergence herbicidal activity against Echinochloa crusgalli and A. theophrasti at a rate of 150 g/ha, and bleaching symptoms were observed in the leaves of treated weeds. The bleaching effect of Chlamydomonas reinhardtii treated by I-05 could be reversed by adding homogentisate. Enzymatic bioassays indicated that I-05 could not inhibit 4-hydroxyphenylpyruvate dioxygenase (HPPD) activity, but II-05, an isoxazole ring-opening product of I-05, could inhibit HPPD activity with an EC50 value of 1.05 µM, similar to that of mesotrione (with an EC50 value of 1.35 µM). Detailed discussion about observed herbicidal symptoms is provided in the Results and Discussion section. This investigation provided a proof-of-concept foundation that a multitarget drug design strategy could be applied in agrochemical research.


Subject(s)
Herbicides/chemical synthesis , Herbicides/pharmacology , Isoxazoles/chemistry , Isoxazoles/pharmacology , Drug Design , Echinochloa/drug effects , Echinochloa/growth & development , Herbicides/chemistry , Molecular Structure , Plant Weeds/drug effects , Plant Weeds/growth & development , Structure-Activity Relationship
16.
J Agric Food Chem ; 68(42): 11665-11671, 2020 Oct 21.
Article in English | MEDLINE | ID: mdl-32975932

ABSTRACT

The fastest and most effective way to control pests is to use pesticides. However, with the accumulation of pesticide resistance and the difficulties of rapidly producing new pesticides, it is of great significance to create new pesticides through new synthetic methods. In this study, we report a computer-aided drug design (CADD)-assisted method to obtain two lead sulfonamides by homology modeling and virtual screening. On this basis, the lead compounds were synthesized from p-chlorocresol by four steps of esterification, sulfonation, sulfonamidation, and amidation. Further, 71 derivatives were synthesized by optimizing the lead compounds, and their insecticidal activities against Mythimna separata were evaluated by the leaf-dipping method. Notably, seven sulfonamides (5a, 5g, 5h, 5m, 6b, 6g, and 6m) with excellent insecticidal activity were obtained, and the possible binding modes between receptors and active groups in sulfonamides were verified by structure-activity relationship and docking simulation, which provided theoretical support for the subsequent development of these novel candidate insecticides.


Subject(s)
Insecticides/chemical synthesis , Insecticides/pharmacology , Sulfonamides/chemistry , Sulfonamides/pharmacology , Animals , Drug Design , Insecticides/chemistry , Molecular Docking Simulation , Molecular Structure , Moths/drug effects , Structure-Activity Relationship
17.
Nat Chem Biol ; 16(10): 1143-1148, 2020 10.
Article in English | MEDLINE | ID: mdl-32601486

ABSTRACT

Membraneless organelles formed by liquid-liquid phase separation of proteins or nucleic acids are involved in diverse biological processes in eukaryotes. However, such cellular compartments have yet to be discovered or created synthetically in prokaryotes. Here, we report the formation of liquid protein condensates inside the cells of prokaryotic Escherichia coli upon heterologous overexpression of intrinsically disordered proteins such as spider silk and resilin. In vitro reconstitution under conditions that mimic intracellular physiologically crowding environments of E. coli revealed that the condensates are formed via liquid-liquid phase separation. We also show functionalization of these condensates via targeted colocalization of cargo proteins to create functional membraneless compartments able to fluoresce and to catalyze biochemical reactions. The ability to form and functionalize membraneless compartments may serve as a versatile tool to develop artificial organelles with on-demand functions in prokaryotes for applications in synthetic biology.


Subject(s)
Cell Membrane , Escherichia coli/physiology , Organelles , Cytosol/chemistry , Cytosol/metabolism , Dynamic Light Scattering , Fibroins/chemistry , Gene Expression Regulation, Bacterial , Green Fluorescent Proteins/chemistry , Microscopy, Confocal , Microscopy, Electron, Transmission , Microscopy, Fluorescence
18.
Bull Environ Contam Toxicol ; 104(6): 864-870, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32342111

ABSTRACT

Fraxinellone is an important botanical lactone compound and has been demonstrated to have insecticidal activity. To provide theoretical support to the assessment on the safety of utilizing fraxinellone as a natural insecticidal agent, the interactions between fraxinellone and armyworm DNA, salmon sperm DNA and calf thymus DNA were investigated using UV-Vis absorption spectroscopy, isothermal titration calorimetry, and molecular docking. Results showed that there were two types of combinations between fraxinellone and three kinds of DNA. Type I combination had an equilibrium constant of combination (Ka1) of about 105 and binding sites (n1) of 0.40-0.70, while type II combination had an equilibrium constant of combination (Ka2) of 103 and binding sites (n2) of 1.35-3.15. Results of molecular docking showed that there were non-classical embedding type interactions between fraxinellone and three kinds of DNA, with the reaction taking place in small groove areas of the DNA structure, resulting in relatively weak interactive forces.


Subject(s)
Benzofurans/chemistry , Biological Control Agents/chemistry , DNA/chemistry , Insecticides/chemistry , Animals , Calorimetry , Molecular Docking Simulation , Moths/drug effects , Spectrum Analysis , Thermodynamics
19.
Clin Ther ; 42(3): 458-474, 2020 03.
Article in English | MEDLINE | ID: mdl-32093874

ABSTRACT

PURPOSE: Previous studies have reported controversial results regarding the risk of restenosis with polymorphisms of endothelial nitric oxide synthase (eNOS), matrix metalloproteinase 3 (MMP-3), angiotensinogen (AGT), and angiotensin II type 1 receptor (AT1R) after percutaneous coronary intervention (PCI). This study aimed to summarize the association between these polymorphisms and risk of restenosis after PCI. METHODS: We searched the electronic databases of PubMed, Embase, Cochrane's Library, and ClinicalTrials.gov for studies on the association of eNOS, MMP-3, AGT, and AT1R polymorphisms with restenosis. FINDINGS: A total of 17 studies (7781 patients) were analyzed, including 5 studies on eNOS G298A (n = 912), 5 studies on MMP3 5A/6A (n = 4519), 6 studies on AGT M235T (n = 1801), and 7 studies on AT1R A1166C (n = 2477). For the G298A variant of the eNOS gene, the allele odds ratio (OR) was 1.685 (95% CI, 1.269-2.338; P < 0.001), the heterozygote OR was 2.144 (95% CI, 1.490-3.085; P < 0.001), the dominant OR was 2.078 (95% CI, 1.462-2.954; P < 0.001), and the overdominant OR was 0.496 (95% CI, 0.348-0.706; P < 0.001). For the 5A/6A variant of the MMP3 gene, the heterozygote OR was 0.839 (95% CI, 0.722-0.975; P = 0.022), the dominant OR was 0.846 (95% CI, 0.733-0.976; P = 0.022), and the overdominant OR was 1.141 (95% CI, 1.001-1.301; P = 0.049). For the M235T variant of the AGT gene, the heterozygote OR was 1.594 (95% CI, 1.179-2.155; P = 0.002), the dominant OR was 1.437 (95% CI, 1.077-1.918; P = 0.014), and the overdominant OR was 0.694 (95% CI, 0.555-0.869; P = 0.001). Positive results were observed in the AT1R gene A1166C polymorphism under 3 models (homozygote OR = 2.009; 95% CI, 1.433-2.816; P < 0.001; recessive OR 1.874; 95% CI, 1.353-2.595; P < 0.001; and dominant OR = 1.350; 95% CI, 1.105-1.649; P = 0.003). IMPLICATIONS: The G298A variant of eNOS, the 5A/6A variant of MMP3, the M235T variant of AGT, and the A1166C variant of A1TR may increase the risk of restenosis after PCI.


Subject(s)
Angiotensinogen/genetics , Matrix Metalloproteinase 3/genetics , Nitric Oxide Synthase Type III/genetics , Percutaneous Coronary Intervention , Receptor, Angiotensin, Type 1/genetics , Coronary Stenosis/epidemiology , Coronary Stenosis/genetics , Coronary Stenosis/surgery , Genetic Predisposition to Disease , Humans , Percutaneous Coronary Intervention/adverse effects , Percutaneous Coronary Intervention/statistics & numerical data , Polymorphism, Single Nucleotide/genetics , Postoperative Complications/epidemiology , Postoperative Complications/genetics , Postoperative Complications/surgery , Recurrence
20.
Bioorg Med Chem Lett ; 28(19): 3164-3167, 2018 10 15.
Article in English | MEDLINE | ID: mdl-30172616

ABSTRACT

Two lead compounds with benzenesulfonamide were found through virtual screening based on the 3D structure of the subunit H of V-ATPase in previous study. 74 benzenesulfonyl derivatives were synthesized and their insecticidal activities were evaluated. The derivatives with propargyl substituents exhibit excellent insecticidal activities against Mythimna separata Walker. The LD50 values of compounds A5.7 (28.0 µg·g-1) and B5.7 (36.4 µg·g-1) were significantly less than that of Celangulin V (344.0 µg·g-1). Furthermore, Isothermal Titration Calorimetry (ITC) data indicate there is a strong binding affinity between A5.7 and V-ATPase Subunit H. These results demonstrate that it is a practical way to develop pesticides targeting at H subunit of V-ATPase.


Subject(s)
Insecticides/chemical synthesis , Insecticides/pharmacology , Mesylates/chemistry , Mesylates/pharmacology , Vacuolar Proton-Translocating ATPases/drug effects , Animals , Biological Assay , Calorimetry/methods , Lethal Dose 50 , Mesylates/chemical synthesis , Moths/drug effects , Thermodynamics , Vacuolar Proton-Translocating ATPases/chemistry
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