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1.
Am J Hum Genet ; 109(2): 345-360, 2022 02 03.
Article in English | MEDLINE | ID: mdl-35045343

ABSTRACT

Free oligosaccharides (fOSs) are soluble oligosaccharide species generated during N-glycosylation of proteins. Although little is known about fOS metabolism, the recent identification of NGLY1 deficiency, a congenital disorder of deglycosylation (CDDG) caused by loss of function of an enzyme involved in fOS metabolism, has elicited increased interest in fOS processing. The catabolism of fOSs has been linked to the activity of a specific cytosolic mannosidase, MAN2C1, which cleaves α1,2-, α1,3-, and α1,6-mannose residues. In this study, we report the clinical, biochemical, and molecular features of six individuals, including two fetuses, with bi-allelic pathogenic variants in MAN2C1; the individuals are from four different families. These individuals exhibit dysmorphic facial features, congenital anomalies such as tongue hamartoma, variable degrees of intellectual disability, and brain anomalies including polymicrogyria, interhemispheric cysts, hypothalamic hamartoma, callosal anomalies, and hypoplasia of brainstem and cerebellar vermis. Complementation experiments with isogenic MAN2C1-KO HAP1 cells confirm the pathogenicity of three of the identified MAN2C1 variants. We further demonstrate that MAN2C1 variants lead to accumulation and delay in the processing of fOSs in proband-derived cells. These results emphasize the involvement of MAN2C1 in human neurodevelopmental disease and the importance of fOS catabolism.


Subject(s)
Central Nervous System Cysts/genetics , Congenital Disorders of Glycosylation/genetics , Hamartoma/genetics , Intellectual Disability/genetics , Oligosaccharides/metabolism , Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase/deficiency , Polymicrogyria/genetics , alpha-Mannosidase/genetics , Adolescent , Alleles , Brain Stem/metabolism , Brain Stem/pathology , Cell Line, Tumor , Central Nervous System Cysts/metabolism , Central Nervous System Cysts/pathology , Cerebellar Vermis/metabolism , Cerebellar Vermis/pathology , Child , Child, Preschool , Congenital Disorders of Glycosylation/metabolism , Congenital Disorders of Glycosylation/pathology , Female , Fetus , Glycosylation , Hamartoma/metabolism , Hamartoma/pathology , Humans , Hypothalamus/metabolism , Hypothalamus/pathology , Intellectual Disability/metabolism , Intellectual Disability/pathology , Leukocytes/metabolism , Leukocytes/pathology , Male , Mannose/metabolism , Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase/genetics , Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase/metabolism , Polymicrogyria/metabolism , Polymicrogyria/pathology , Tongue/metabolism , Tongue/pathology , alpha-Mannosidase/deficiency
2.
Front Neurol ; 13: 1063803, 2022.
Article in English | MEDLINE | ID: mdl-36686537

ABSTRACT

Copper deficiency is an acquired condition that can lead to neurologic dysfunctions, such as myelopathy, motor neuron impairment, polyneuropathy, cognitive impairment, and optic nerve neuropathy. Associated biological findings are low serum copper and ceruloplasmin levels with low copper urinary excretion. We report the case of a previously healthy 59-year-old man who presented a complex neurological picture starting with symptoms and radiological signs consistent with degenerative myelopathy in the presence of persisting low serum copper and ceruloplasmin despite oral and intravenous copper supplementation. Over time, his symptoms evolved into a motor neuron disease evocating an amyotrophic lateral sclerosis (ALS) phenotype. The potential role of copper deficiency is discussed, together with the difficulties in biomonitoring copper supplementation.

3.
Brain Commun ; 3(4): fcab256, 2021.
Article in English | MEDLINE | ID: mdl-34805998

ABSTRACT

The recent identification of NAA80/NAT6 as the enzyme that acetylates actins generated new insight into the process of post-translational actin modifications; however, the role of NAA80 in human physiology and pathology has not been clarified yet. We report two individuals from a single family harbouring a homozygous c.389T>C, p.(Leu130Pro) NAA80 genetic variant. Both individuals show progressive high-frequency sensorineural hearing loss, craniofacial dysmorphisms, developmental delay and mild proximal and axial muscle weakness. Based on the molecular structure, we predicted and confirmed the NAA80 c.389T>C, p.(Leu130Pro) variant to result in protein destabilization, causing severely decreased NAA80 protein availability. Concurrently, individuals exhibited a ∼50% decrease of actin acetylation. NAA80 individual derived fibroblasts and peripheral blood mononuclear cells showed increased migration, increased filopodia counts and increased levels of polymerized actin, in agreement with previous observations in NAA80 knock-out cells. Furthermore, the significant clinical overlap between NAA80 individuals and individuals with pathogenic variants in several actin subtypes reflects the general importance of controlled actin dynamics for the inner ear, brain and muscle. Taken together, we describe a new syndrome, caused by NAA80 genetic variants leading to decreased actin acetylation and disrupted associated molecular functions. Our work suggests a crucial role for NAA80-mediated actin dynamics in neuronal health, muscle health and hearing.

4.
J Clin Invest ; 131(12)2021 06 15.
Article in English | MEDLINE | ID: mdl-33945503

ABSTRACT

BACKGROUNDDeciphering the function of the many genes previously classified as uncharacterized open reading frame (ORF) would complete our understanding of a cell's function and its pathophysiology.METHODSWhole-exome sequencing, yeast 2-hybrid and transcriptome analyses, and molecular characterization were performed in this study to uncover the function of the C2orf69 gene.RESULTSWe identified loss-of-function mutations in the uncharacterized C2orf69 gene in 8 individuals with brain abnormalities involving hypomyelination and microcephaly, liver dysfunction, and recurrent autoinflammation. C2orf69 contains an N-terminal signal peptide that is required and sufficient for mitochondrial localization. Consistent with mitochondrial dysfunction, the patients showed signs of respiratory chain defects, and a CRISPR/Cas9-KO cell model of C2orf69 had similar respiratory chain defects. Patient-derived cells revealed alterations in immunological signaling pathways. Deposits of periodic acid-Schiff-positive (PAS-positive) material in tissues from affected individuals, together with decreased glycogen branching enzyme 1 (GBE1) activity, indicated an additional impact of C2orf69 on glycogen metabolism.CONCLUSIONSOur study identifies C2orf69 as an important regulator of human mitochondrial function and suggests that this gene has additional influence on other metabolic pathways.


Subject(s)
Glycogen/metabolism , Loss of Function Mutation , Microcephaly/metabolism , Mitochondria/metabolism , Mitochondrial Proteins/metabolism , Open Reading Frames , Animals , Cell Line , Glycogen/genetics , Glycogen Debranching Enzyme System/genetics , Glycogen Debranching Enzyme System/metabolism , Humans , Mice , Mice, Knockout , Microcephaly/genetics , Mitochondria/genetics , Mitochondrial Proteins/genetics
5.
Clin Case Rep ; 8(6): 1010-1014, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32577254

ABSTRACT

We report a fetus with heterogeneous colonic content, an isolated sonographic prenatal sign of lysinuric protein intolerance, a very rare metabolic disease. Familial genetic enquiries confirmed heterozygote mutation in the implicated gene in parents. The prenatal diagnosis led to neonatal dietary adaptation and avoided acute complications.

6.
Ann Neurol ; 85(3): 385-395, 2019 03.
Article in English | MEDLINE | ID: mdl-30635937

ABSTRACT

OBJECTIVE: SLC13A3 encodes the plasma membrane Na+ /dicarboxylate cotransporter 3, which imports inside the cell 4 to 6 carbon dicarboxylates as well as N-acetylaspartate (NAA). SLC13A3 is mainly expressed in kidney, in astrocytes, and in the choroid plexus. We describe two unrelated patients presenting with acute, reversible (and recurrent in one) neurological deterioration during a febrile illness. Both patients exhibited a reversible leukoencephalopathy and a urinary excretion of α-ketoglutarate (αKG) that was markedly increased and persisted over time. In one patient, increased concentrations of cerebrospinal fluid NAA and dicarboxylates (including αKG) were observed. Extensive workup was unsuccessful, and a genetic cause was suspected. METHODS: Whole exome sequencing (WES) was performed. Our teams were connected through GeneMatcher. RESULTS: WES analysis revealed variants in SLC13A3. A homozygous missense mutation (p.Ala254Asp) was found in the first patient. The second patient was heterozygous for another missense mutation (p.Gly548Ser) and an intronic mutation affecting splicing as demonstrated by reverse transcriptase polymerase chain reaction performed in muscle tissue (c.1016 + 3A > G). Mutations and segregation were confirmed by Sanger sequencing. Functional studies performed on HEK293T cells transiently transfected with wild-type and mutant SLC13A3 indicated that the missense mutations caused a marked reduction in the capacity to transport αKG, succinate, and NAA. INTERPRETATION: SLC13A3 deficiency causes acute and reversible leukoencephalopathy with marked accumulation of αKG. Urine organic acids (especially αKG and NAA) and SLC13A3 mutations should be screened in patients presenting with unexplained reversible leukoencephalopathy, for which SLC13A3 deficiency is a novel differential diagnosis. ANN NEUROL 2019;85:385-395.


Subject(s)
Aspartic Acid/analogs & derivatives , Ketoglutaric Acids/metabolism , Leukoencephalopathies/genetics , Symporters/genetics , Adolescent , Aspartic Acid/cerebrospinal fluid , Aspartic Acid/metabolism , Child, Preschool , Female , HEK293 Cells , Humans , Ketoglutaric Acids/cerebrospinal fluid , Ketoglutaric Acids/urine , Leukoencephalopathies/metabolism , Magnetic Resonance Imaging , Magnetic Resonance Spectroscopy , Male , Mutation, Missense , Pedigree , Respiratory Tract Infections , Succinic Acid/metabolism , Symporters/metabolism , Tonsillitis , Exome Sequencing
7.
FEBS J ; 285(17): 3299-3316, 2018 09.
Article in English | MEDLINE | ID: mdl-30028079

ABSTRACT

All forms of mammalian actin comprise at their N-terminus a negatively charged region consisting of an N-acetylated aspartate or glutamate followed by two or three acidic residues. This structural feature is unique to actins and important for their interaction with other proteins. The enzyme catalyzing the acetylation of the N-terminal acidic residue is thought to be NAA10, an enzyme that acetylates multiple intracellular proteins. We report here that this acetylation is essentially carried out by NAT6 (Fus2), a protein of unknown function. Tests of the activity of human recombinant NAT6 on a series of purified proteins showed that the best substrate had several acidic residues near its N-terminus. Accordingly NAT6 was particularly active on highly acidic peptides with sequences corresponding to the N-terminus of different forms of mammalian actins. Knocking out of NAT6 in two human cell lines led to absence of acetylation of the first residue of mature beta-actin (Asp2) and gamma-actin-1 (Glu2). Complete acetylation of these two actins was restored by re-expression of NAT6, or by incubation of extracts of NAT6-deficient cells with low concentrations of recombinant NAT6, while NAA10 showed much less or no activity in such assays. Alpha-actin-1 expressed in NAT6-knockout cells was not acetylated at its N-terminus, indicating that the requirement of NAT6 for acetylation of actin N-termini also applies to the skeletal muscle actin isoform. Taken together, our findings reveal that NAT6 plays a critical role in the maturation of actins by carrying out the acetylation of their N-terminal acidic residue.


Subject(s)
Acetyltransferases/metabolism , Actins/chemistry , Actins/metabolism , Acetylation , Amino Acid Sequence , Cells, Cultured , Humans , Models, Molecular , N-Terminal Acetyltransferase A/metabolism , N-Terminal Acetyltransferase E/metabolism , Protein Isoforms , Protein Processing, Post-Translational , Sequence Homology
8.
Int J Pediatr Otorhinolaryngol ; 104: 191-194, 2018 Jan.
Article in English | MEDLINE | ID: mdl-29287866

ABSTRACT

CAPOS syndrome (cerebellar ataxia, areflexia, pes cavus, optic atrophy, and sensorineural hearing loss) is a rare neurological disorder, recently associated with the c.2452G > A hotspot mutation in the ATP1A3 gene, with sensorineural hearing loss as a prominent feature. We herein report on a girl who has experienced hearing loss for three years following an initial encephalitic episode when aged 15 months old. CAPOS was diagnosed only when she was six years old by targeted testing whilst she displayed optic atrophy, cerebellar signs and areflexia. CAPOS syndrome should be considered in the differential diagnosis of acquired childhood deafness, prompting clinicians to search for associated neurological features.


Subject(s)
Cerebellar Ataxia/diagnosis , Foot Deformities, Congenital/diagnosis , Hearing Loss, Sensorineural/etiology , Optic Atrophy/diagnosis , Cerebellar Ataxia/complications , Child , Diagnosis, Differential , Female , Foot Deformities, Congenital/complications , Hearing Loss, Sensorineural/complications , Hearing Loss, Sensorineural/diagnosis , Hearing Tests , Humans , Mutation , Optic Atrophy/complications , Reflex, Abnormal , Sodium-Potassium-Exchanging ATPase/genetics
9.
Am J Med Genet A ; 173(8): 2246-2250, 2017 Aug.
Article in English | MEDLINE | ID: mdl-28574218

ABSTRACT

GMPPA encodes the GDP-mannose pyrophosphorylase A protein (GMPPA). The function of GMPPA is not well defined, however it is a homolog of GMPPB which catalyzes the reaction that converts mannose-1-phosphate and guanosine-5'-triphosphate to GDP-mannose. Previously, biallelic mutations in GMPPA were reported to cause a disorder characterized by achalasia, alacrima, neurological deficits, and intellectual disability. In this study, we report a female proband with achalasia, alacrima, hypohydrosis, apparent intellectual disability, seizures, microcephaly, esotropia, and craniofacial dysmorphism. Exome sequencing identified a previously unreported homozygous c.853+1G>A variant in GMPPA in the proband and her affected sister. Their unaffected parents were heterozygous, and unaffected brother homozygous wild type for this variant. Lymphoblast cells from the affected sisters showed complete loss of the GMPPA protein by Western blotting, and increased levels of GDP-mannose in lymphoblasts on high performance liquid chromatography. Based on our findings and the previous report describing patients with an overlapping phenotype, we conclude that this novel variant in GMPPA, identified by exome sequencing in the proband and her affected sister, is the genetic cause of their phenotype and may expand the known phenotype of this recently described glycosylation disorder.


Subject(s)
Abnormalities, Multiple/genetics , Epilepsy/genetics , Intellectual Disability/genetics , Muscular Atrophy/genetics , Nucleotidyltransferases/genetics , Abnormalities, Multiple/physiopathology , Child , Child, Preschool , Craniofacial Abnormalities/complications , Craniofacial Abnormalities/genetics , Craniofacial Abnormalities/physiopathology , Epilepsy/complications , Epilepsy/physiopathology , Exome/genetics , Facies , Female , Heterozygote , Humans , Intellectual Disability/complications , Intellectual Disability/physiopathology , Microcephaly/complications , Microcephaly/genetics , Microcephaly/physiopathology , Muscular Atrophy/physiopathology , Mutation, Missense , Pedigree , Phenotype , Seizures/complications , Seizures/genetics , Seizures/physiopathology
10.
Eur J Paediatr Neurol ; 20(5): 777-81, 2016 Sep.
Article in English | MEDLINE | ID: mdl-27321952

ABSTRACT

INTRODUCTION: Lysinuric protein intolerance (LPI) is a form of inherited aminoaciduria caused by a deficiency in the cationic amino acid transport process on the basolateral membrane of enterocytes and renal tubular cells. Clinical signs include gastrointestinal symptoms, failure to thrive, hepatosplenomegaly, osteoporosis, episodes of coma, intellectual deficiency, lung and renal involvement, bone marrow abnormalities, as well as altered immune response. Moyamoya disease is a cerebrovascular disorder predisposing sufferers to stroke through progressive stenosis of the intracranial internal carotid arteries and their proximal branches. Patients with characteristic moyamoya vasculopathy who also exhibit well-recognized associated conditions, such as Down syndrome or sickle-cell disease, are diagnosed with moyamoya syndrome, whereas those with no known associated risk factors are said to suffer from moyamoya disease. CASE STUDY: A 5-year-old girl exhibiting aversion to protein-rich food and splenomegaly presented with a history of recurrent ischemic strokes. Cerebral angiography confirmed moyamoya vasculopathy. Metabolic investigation revealed abnormalities characteristic of LPI. This diagnosis was confirmed by the detection of a mutation within the SLC7A7 gene upon molecular investigation. CONCLUSION: To the best of our knowledge, this is the first reported case of an association between moyamoya vasculopathy and LPI. While the question of association or coincidence cannot yet be answered, several pathophysiological consequences of LPI can be defined as separate, such as links between the impact of low arginine levels on the function of vascular endothelium and brain nitric oxide metabolism, as well as hemophagocytic syndrome associated with the risk of vasculitis, thus accounting for the development of moyamoya vasculopathy.


Subject(s)
Amino Acid Metabolism, Inborn Errors/complications , Moyamoya Disease/complications , Amino Acid Metabolism, Inborn Errors/genetics , Amino Acid Transport System y+L , Child, Preschool , Female , Fusion Regulatory Protein 1, Light Chains/genetics , Humans , Mutation
11.
Eur J Paediatr Neurol ; 20(1): 53-60, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26610677

ABSTRACT

OBJECTIVE AND PATIENTS: We report on two new cases of serine deficiency due respectively to 3-phosphoglycerate dehydrogenase (PHGDH) deficiency (Patient 1) and phosphoserine aminotransferase (PSAT1) deficiency (Patient 2), presenting with congenital microcephaly (<3rd centile at birth) and encephalopathy with spasticity. Patient 1 had also intractable seizures. A treatment with oral l-serine was started at age 4.5 years and 3 months respectively. RESULTS: Serine levels were low in plasma and CSF relative to the reference population, for which we confirm recently redefined intervals based on a larger number of samples. l-Serine treatment led in patient 1 to a significant reduction of seizures after one week of treatment and decrease of electroencephalographic abnormalities within one year. In patient 2 treatment with l-serine led to an improvement of spasticity. However for both patients, l-serine failed to improve substantially head circumference (HC) and neurocognitive development. In a couple related to patient's 2 family, dosage of serine was performed on fetal cord blood when the fetus presented severe microcephaly, showing reduced serine levels at 30 weeks of pregnancy. CONCLUSIONS: l-Serine treatment in patients with 2 different serine synthesis defects, led to a significant reduction of seizures and an improvement of spasticity, but failed to improve substantially neurocognitive impairment. Therefore, CSF and plasma serine levels should be measured in all cases of severe microcephaly at birth to screen for serine deficiency, as prompt treatment with l-serine may significantly impact the outcome of the disease. Reduced serine levels in fetal cord blood may also be diagnostic as early as 30 weeks of pregnancy.


Subject(s)
Amino Acid Metabolism, Inborn Errors/drug therapy , Carbohydrate Metabolism, Inborn Errors/drug therapy , Microcephaly/drug therapy , Phosphoglycerate Dehydrogenase/deficiency , Psychomotor Disorders/drug therapy , Seizures/drug therapy , Serine/deficiency , Serine/therapeutic use , Transaminases/deficiency , Adult , Amino Acid Metabolism, Inborn Errors/genetics , Amino Acids/cerebrospinal fluid , Carbohydrate Metabolism, Inborn Errors/genetics , Child, Preschool , Cognition Disorders/drug therapy , Cognition Disorders/etiology , Drug Resistant Epilepsy/etiology , Electroencephalography , Female , Head/growth & development , Humans , Infant , Infant, Newborn , Male , Microcephaly/etiology , Microcephaly/genetics , Muscle Spasticity/etiology , Phosphoglycerate Dehydrogenase/genetics , Pregnancy , Psychomotor Disorders/genetics , Seizures/etiology , Seizures/genetics , Serine/blood , Transaminases/genetics , Treatment Outcome
12.
PLoS One ; 10(3): e0119540, 2015.
Article in English | MEDLINE | ID: mdl-25763823

ABSTRACT

The purpose of the present work was to progress in our understanding of the pathophysiology of L-2-hydroxyglutaric aciduria, due to a defect in L-2-hydroxyglutarate dehydrogenase, by creating and studying a mouse model of this disease. L-2-hydroxyglutarate dehydrogenase-deficient mice (l2hgdh-/-) accumulated L-2-hydroxyglutarate in tissues, most particularly in brain and testis, where the concentration reached ≈ 3.5 µmol/g. Male mice showed a 30% higher excretion of L-2-hydroxyglutarate compared to female mice, supporting that this dicarboxylic acid is partially made in males by lactate dehydrogenase C, a poorly specific form of this enzyme exclusively expressed in testes. Involvement of mitochondrial malate dehydrogenase in the formation of L-2-hydroxyglutarate was supported by the commensurate decrease in the formation of this dicarboxylic acid when down-regulating this enzyme in mouse l2hgdh-/- embryonic fibroblasts. The concentration of lysine and arginine was markedly increased in the brain of l2hgdh-/- adult mice. Saccharopine was depleted and glutamine was decreased by ≈ 40%. Lysine-α-ketoglutarate reductase, which converts lysine to saccharopine, was inhibited by L-2-hydroxyglutarate with a Ki of ≈ 0.8 mM. As low but significant activities of the bifunctional enzyme lysine-α-ketoglutarate reductase/saccharopine dehydrogenase were found in brain, these findings suggest that the classical lysine degradation pathway also operates in brain and is inhibited by the high concentrations of L-2-hydroxyglutarate found in l2hgdh-/- mice. Pathological analysis of the brain showed significant spongiosis. The vacuolar lesions mostly affected oligodendrocytes and myelin sheats, as in other dicarboxylic acidurias, suggesting that the pathophysiology of this model of leukodystrophy may involve irreversible pumping of a dicarboxylate in oligodendrocytes. Neurobehavioral testing indicated that the mice mostly suffered from a deficit in learning capacity. In conclusion, the findings support the concept that L-2-hydroxyglutaric aciduria is a disorder of metabolite repair. The accumulation of L-2-hydroxyglutarate exerts toxic effects through various means including enzyme inhibition and glial cell swelling.


Subject(s)
Alcohol Oxidoreductases/genetics , Brain Diseases, Metabolic, Inborn/pathology , Brain/pathology , Disease Models, Animal , Glutarates/metabolism , Testis/metabolism , Alcohol Oxidoreductases/metabolism , Animals , Arginine/metabolism , Brain/metabolism , Brain Diseases, Metabolic, Inborn/genetics , Brain Diseases, Metabolic, Inborn/metabolism , Cells, Cultured , Female , Ketone Oxidoreductases/metabolism , Lysine/metabolism , Male , Mice , Mice, Knockout
13.
Neuropediatrics ; 44(5): 281-5, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23564319

ABSTRACT

3-Phosphoglycerate dehydrogenase (3-PGDH) deficiency is a rare autosomal recessive disorder of serine biosynthesis. It is typically characterized by congenital microcephaly, intractable seizures of infantile onset, and severe psychomotor retardation. Diagnosis is suspected on decreased l-serine levels in plasma and cerebrospinal fluid (CSF) and confirmed by genetic study. Early diagnosis in index cases allows supplementation in serine and prevention of fixed lesions. Prenatal diagnosis and genetic counseling allows prevention of secondary cases. We report on the two first unrelated Tunisian families with 3-PGDH deficiency confirmed by biochemical and genetic study. We discuss clinical, biochemical, imaging, electroencephalographic, and therapeutic aspects and review the literature.


Subject(s)
Amino Acid Metabolism, Inborn Errors/genetics , Intellectual Disability/genetics , Microcephaly/genetics , Phosphoglycerate Dehydrogenase/deficiency , Seizures/genetics , Serine/biosynthesis , Amino Acid Metabolism, Inborn Errors/metabolism , Child, Preschool , Female , Humans , Intellectual Disability/metabolism , Male , Microcephaly/metabolism , Phosphoglycerate Dehydrogenase/genetics , Seizures/metabolism , Tunisia
14.
Arch Neurol ; 69(7): 908-11, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22393170

ABSTRACT

BACKGROUND: Serine synthesis defects, characterized by developmental delay and seizures, have been described in children. OBJECTIVE: To describe a case of serine synthesis defect due to 3-phosphoglycerate dehydrogenase deficiency in an adult with prominent chronic polyneuropathy. DESIGN: Case report. SETTING: Neurologic referral center. PATIENT: A 31-year-old man with congenital cataracts, mild psychomotor retardation, slight cerebellar ataxia, and chronic axonal sensorimotor polyneuropathy. INTERVENTIONS: Electrophysiologic, metabolic, and genetic testing and treatment with oral L-serine. MAIN OUTCOME MEASURES: Serine values in plasma and cerebrospinal fluid and clinical examination. RESULTS: Amino acid analysis showed low serine levels in plasma and cerebrospinal fluid, and genetic analysis revealed 2 heterozygous mutations in the PGDH gene. Treatment with high-dose serine resulted in normalization of plasma serine values and subjective functional improvement. CONCLUSIONS: This case expands the phenotypic spectrum of 3-phosphoglycerate dehydrogenase deficiency. Plasma amino acid chromatography should be added to the list of investigations performed in patients with Charcot-Marie-Tooth­like polyneuropathy, especially if it is associated with psychomotor delay and congenital cataracts.


Subject(s)
Amino Acid Metabolism, Inborn Errors/complications , Charcot-Marie-Tooth Disease/complications , Phosphoglycerate Dehydrogenase/deficiency , Serine/administration & dosage , Administration, Oral , Adult , Amino Acid Metabolism, Inborn Errors/blood , Amino Acid Metabolism, Inborn Errors/cerebrospinal fluid , Charcot-Marie-Tooth Disease/blood , Charcot-Marie-Tooth Disease/cerebrospinal fluid , DNA Mutational Analysis , Humans , Male , Metabolic Networks and Pathways/genetics , Phosphoglycerate Dehydrogenase/genetics , Serine/blood , Serine/cerebrospinal fluid
15.
Biochem J ; 441(1): 105-12, 2012 Jan 01.
Article in English | MEDLINE | ID: mdl-21936773

ABSTRACT

Aspartate N-acetyltransferase (NAT8L, N-acetyltransferase 8-like), the enzyme that synthesizes N-acetylaspartate, is membrane-bound and is at least partially associated with the ER (endoplasmic reticulum). The aim of the present study was to determine which regions of the protein are important for its catalytic activity and its subcellular localization. Transfection of truncated forms of NAT8L into HEK (human embryonic kidney)-293T cells indicated that the 68 N-terminal residues (regions 1 and 2) have no importance for the catalytic activity and the subcellular localization of this enzyme, which was exclusively associated with the ER. Mutation of conserved residues that precede (Arg81 and Glu101, in region 3) or follow (Asp168 and Arg220, in region 5) the putative membrane region (region 4) markedly affected the kinetic properties, suggesting that regions 3 and 5 form the catalytic domain and that the membrane region has a loop structure. Evidence is provided for the membrane region comprising α-helices and the catalytic site being cytosolic. Transfection of chimaeric proteins in which GFP (green fluorescent protein) was fused to different regions of NAT8L indicated that the membrane region (region 4) is necessary and sufficient to target NAT8L to the ER. Thus NAT8L is targeted to the ER membrane by a hydrophobic loop that connects two regions of the catalytic domain.


Subject(s)
Acetyltransferases/metabolism , Acetyltransferases/genetics , Amino Acid Sequence , Animals , CHO Cells , Cell Membrane , Cricetinae , Endoplasmic Reticulum , HEK293 Cells , Humans , Molecular Sequence Data , Point Mutation , Protein Conformation , Protein Transport
16.
Amino Acids ; 42(4): 1143-50, 2012 Apr.
Article in English | MEDLINE | ID: mdl-20967558

ABSTRACT

Protein deglycation, a new form of protein repair, involves several enzymes. Fructosamine-3-kinase (FN3K), an enzyme found in mammals and birds, phosphorylates fructosamines on the third carbon of their sugar moiety, making them unstable and causing them to detach from proteins. This enzyme acts particularly well on fructose-epsilon-lysine, both in free form and in the accessible regions of proteins. Mice deficient in FN3K accumulate protein-bound fructosamines and free fructoselysine, indicating that the deglycation mechanism initiated by FN3K is operative in vivo. Mammals and birds also have an enzyme designated 'FN3K-related protein' (FN3KRP), which shares ≈ 65% sequence identity with FN3K. Unlike FN3K, FN3KRP does not phosphorylate fructosamines, but acts on ribulosamines and erythrulosamines. As with FN3K, the third carbon is phosphorylated and this leads to destabilization of the ketoamines. Experiments with intact erythrocytes indicate that FN3KRP is also a protein-repair enzyme. Its physiological substrates are most likely formed from ribose 5-phosphate and erythrose 4-phosphate, which give rise to ketoamine 5- or 4-phosphates. The latter are dephosphorylated by 'low-molecular-weight protein-tyrosine-phosphatase-A' (LMW-PTP-A) before FN3KRP transfers a phosphate on the third carbon. The specificity of FN3K homologues present in plants and bacteria is similar to that of mammalian FN3KRP, suggesting that deglycation of ribulosamines and/or erythrulosamines is an ancient mechanism. Mammalian cells contain also a phosphatase acting on fructosamine 6-phosphates, which result from the reaction of proteins with glucose 6-phosphate.


Subject(s)
Phosphotransferases (Alcohol Group Acceptor)/metabolism , Proteins/metabolism , Animals , Humans , Phosphotransferases (Alcohol Group Acceptor)/chemistry , Substrate Specificity
17.
Biochem J ; 425(1): 127-36, 2009 Dec 14.
Article in English | MEDLINE | ID: mdl-19807691

ABSTRACT

The brain-specific compound NAA (N-acetylaspartate) occurs almost exclusively in neurons, where its concentration reaches approx. 20 mM. Its abundance is determined in patients by MRS (magnetic resonance spectroscopy) to assess neuronal density and health. The molecular identity of the NAT (N-acetyltransferase) that catalyses NAA synthesis has remained unknown, because the enzyme is membrane-bound and difficult to purify. Database searches indicated that among putative NATs (i.e. proteins homologous with known NATs, but with uncharacterized catalytic activity) encoded by the human and mouse genomes two were almost exclusively expressed in brain, NAT8L and NAT14. Transfection studies in HEK-293T [human embryonic kidney-293 cells expressing the large T-antigen of SV40 (simian virus 40)] indicated that NAT8L, but not NAT14, catalysed the synthesis of NAA from L-aspartate and acetyl-CoA. The specificity of NAT8L, its Km for aspartate and its sensitivity to detergents are similar to those described for brain Asp-NAT. Confocal microscopy analysis of CHO (Chinese-hamster ovary) cells and neurons expressing recombinant NAT8L indicates that it is associated with the ER (endoplasmic reticulum), but not with mitochondria. A mutation search in the NAT8L gene of the only patient known to be deficient in NAA disclosed the presence of a homozygous 19 bp deletion, resulting in a change in reading frame and the absence of production of a functional protein. We conclude that NAT8L, a neuron-specific protein, is responsible for NAA synthesis and is mutated in primary NAA deficiency (hypoacetylaspartia). The molecular identification of this enzyme will lead to new perspectives in the clarification of the function of this most abundant amino acid derivative in neurons and for the diagnosis of hypoacetylaspartia in other patients.


Subject(s)
Acetyltransferases/genetics , Acetyltransferases/metabolism , Aspartic Acid/analogs & derivatives , Mutation , Acetyl Coenzyme A/metabolism , Animals , Aspartic Acid/deficiency , Aspartic Acid/metabolism , Base Sequence , Brain/metabolism , CHO Cells , Catalysis , Cell Line , Cells, Cultured , Cricetinae , Cricetulus , Databases, Genetic , Endoplasmic Reticulum/metabolism , Humans , Kinetics , Microscopy, Confocal , Molecular Sequence Data , Neurons/cytology , Neurons/metabolism , Rats , Substrate Specificity , Transfection
18.
Am J Hum Genet ; 80(5): 931-7, 2007 May.
Article in English | MEDLINE | ID: mdl-17436247

ABSTRACT

We present the first two identified cases of phosphoserine aminotransferase deficiency. This disorder of serine biosynthesis has been identified in two siblings who showed low concentrations of serine and glycine in plasma and cerebrospinal fluid. Clinically, the index patient presented with intractable seizures, acquired microcephaly, hypertonia, and psychomotor retardation and died at age 7 mo despite supplementation with serine (500 mg/kg/d) and glycine (200 mg/kg/d) from age 11 wk. The younger sibling received treatment from birth, which led to a normal outcome at age 3 years. Measurement of phosphoserine aminotransferase activity in cultured fibroblasts in the index patient was inconclusive, but mutational analysis revealed compound heterozygosity for two mutations in the PSAT1 gene--one frameshift mutation (c.delG107) and one missense mutation (c.299A-->C [p.Asp100Ala])--in both siblings. Expression studies of the p.Asp100Ala mutant protein revealed a V(max) of only 15% of that of the wild-type protein.


Subject(s)
Amino Acid Metabolism, Inborn Errors/genetics , Amino Acid Metabolism, Inborn Errors/metabolism , Serine/biosynthesis , Transaminases/deficiency , Transaminases/genetics , Amino Acid Metabolism, Inborn Errors/drug therapy , Amino Acid Metabolism, Inborn Errors/pathology , Amino Acid Sequence , Base Sequence , Brain/pathology , Child, Preschool , DNA/genetics , Female , Frameshift Mutation , Glycine/deficiency , Glycine/therapeutic use , Heterozygote , Humans , In Vitro Techniques , Infant , Infant, Newborn , Magnetic Resonance Imaging , Male , Models, Molecular , Molecular Sequence Data , Mutation, Missense , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Homology, Amino Acid , Serine/deficiency , Serine/therapeutic use , Transaminases/chemistry , Transaminases/metabolism
20.
Biochem J ; 392(Pt 2): 263-9, 2005 Dec 01.
Article in English | MEDLINE | ID: mdl-16153181

ABSTRACT

The metabolism of the glycation product fructose-epsilon-lysine in Escherichia coli involves its ATP-dependent phosphorylation by a specific kinase (FrlD), followed by the conversion of fructoselysine 6-phosphate into glucose 6-phosphate and lysine by fructoselysine-6-phosphate deglycase (FrlB), which is distantly related to the isomerase domain of glucosamine-6-phosphate synthase. As shown in the present work, several bacterial operons comprise: (1) a homologue of fructoselysine-6-phosphate deglycase; (2) a second homologue of the isomerase domain of glucosamine-6-phosphate synthase, more closely related to it; and (3) components of a novel phosphotransferase system, but no FrlD homologue. The FrlB homologue (GfrF) and the closer glucosamine-6-phosphate synthase homologue (GfrE) encoded by an Enterococcus faecium operon were expressed in E. coli and purified. Similar to FrlB, GfrF catalysed the reversible conversion of fructoselysine 6-phosphate into glucose 6-phosphate and lysine. When incubated with fructose 6-phosphate and elevated concentrations of lysine, GfrE catalysed the formation of a compound identified as 2-epsilon-lysino-2-deoxy-6-phospho-glucose (glucoselysine 6-phosphate) by NMR. GfrE also catalysed the reciprocal conversion, i.e. the formation of fructose 6-phosphate (but not glucose 6-phosphate) from glucoselysine 6-phosphate. The equilibrium constant of this reaction (0.8 M) suggests that the enzyme serves to degrade glucoselysine 6-phosphate. In conclusion, GfrF and GfrE serve to metabolize glycation products formed from lysine and glucose (fructoselysine) or fructose (glucoselysine), via their 6-phospho derivatives. The latter are presumably formed by the putative phosphotransferase system encoded by gfrA-gfrD. The designation gfr (glycation and fructation product degradation) is proposed for this operon. This is the first description of an enzyme participating in the metabolism of fructation products.


Subject(s)
Bacteria/enzymology , Glucose/analogs & derivatives , Lysine/analogs & derivatives , Lysine/metabolism , Amino Acid Sequence , Aminohydrolases/genetics , Aminohydrolases/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Fructosephosphates/metabolism , Gene Expression Regulation, Bacterial , Gene Expression Regulation, Enzymologic , Glucose/metabolism , Molecular Sequence Data , Open Reading Frames , Operon , Sequence Alignment , Sequence Homology, Amino Acid
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