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1.
Mol Ecol ; 19(21): 4738-52, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20958814

ABSTRACT

Biological invasions are rapid evolutionary events in which populations are usually subject to a founder event during introduction followed by rapid adaptation to the new environment. Molecular tools and Bayesian approaches have shown their utility in exploring different evolutionary scenarios regarding the invasion routes of introduced species. We examined the situation for the tobacco aphid, Myzus persicae nicotianae, a recently introduced aphid species in Chile. Using seven microsatellite loci and approximate Bayesian computation, we studied populations of the tobacco aphid sampled from several American and European countries, identifying the most likely source populations and tracking the route of introduction to Chile. Our population genetic data are consistent with available historical information, pointing to an introduction route of the tobacco aphid from Europe and/or from other putative populations (e.g. Asia) with subsequent introduction through North America to South America. Evidence of multiple introductions to North America from different genetic pools, with successive loss of genetic diversity from Europe towards North America and a strong bottleneck during the southward introduction to South America, was also found. Additionally, we examined the special case of a widespread multilocus genotype that was found in all American countries examined. This case provides further evidence for the existence of highly successful genotypes or 'superclones' in asexually reproducing organisms.


Subject(s)
Aphids/genetics , Genetic Variation , Genetics, Population , Introduced Species , Animals , Argentina , Bayes Theorem , Brazil , Chile , Founder Effect , France , Genotype , Greece , Microsatellite Repeats , Models, Biological , Multilocus Sequence Typing , Sequence Analysis, DNA , United States
2.
Insect Mol Biol ; 19 Suppl 2: 5-12, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20482635

ABSTRACT

AphidBase is a centralized bioinformatic resource that was developed to facilitate community annotation of the pea aphid genome by the International Aphid Genomics Consortium (IAGC). The AphidBase Information System designed to organize and distribute genomic data and annotations for a large international community was constructed using open source software tools from the Generic Model Organism Database (GMOD). The system includes Apollo and GBrowse utilities as well as a wiki, blast search capabilities and a full text search engine. AphidBase strongly supported community cooperation and coordination in the curation of gene models during community annotation of the pea aphid genome. AphidBase can be accessed at http://www.aphidbase.com.


Subject(s)
Aphids/genetics , Databases, Genetic , Genome, Insect , Animals , Aphids/pathogenicity , Computational Biology , Pisum sativum/parasitology , Software
3.
Insect Mol Biol ; 19 Suppl 2: 249-58, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20482655

ABSTRACT

The pea aphid genome includes 66 genes contributing to amino acid biosynthesis and 93 genes to amino acid degradation. In several respects, the pea aphid gene inventory complements that of its symbiotic bacterium, Buchnera aphidicola (Buchnera APS). Unlike other insects with completely sequenced genomes, the pea aphid lacks the capacity to synthesize arginine, which is produced by Buchnera APS. However, consistent with other insects, it has genes coding for individual reactions in essential amino acid biosynthesis, including threonine dehydratase and branched-chain amino acid aminotransferase, which are not coded in the Buchnera APS genome. Overall the genome data suggest that the biosynthesis of certain essential amino acids is shared between the pea aphid and Buchnera APS, providing the opportunity for precise aphid control over Buchnera metabolism.


Subject(s)
Amino Acids/metabolism , Aphids/genetics , Aphids/metabolism , Buchnera/genetics , Buchnera/metabolism , Genome, Bacterial , Genome, Insect , Amino Acids/biosynthesis , Animals , Aphids/microbiology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Genetic Complementation Test , Insect Proteins/genetics , Insect Proteins/metabolism , Models, Biological , Pisum sativum/parasitology , Symbiosis/genetics , Symbiosis/physiology , Transaminases/genetics , Transaminases/metabolism
4.
Heredity (Edinb) ; 88(4): 258-66, 2002 Apr.
Article in English | MEDLINE | ID: mdl-11920132

ABSTRACT

We examined the population structure of the introduced aphid, Myzus persicae collected mainly from its primary host, Prunus persica, in south-east Australia. Myzus persicae has been present in Australia since at least 1893. Samples were collected in the spring of 1998 from two mainland and three Tasmanian localities and isofemale lines were established in the laboratory. The reproductive mode (life cycle), karyotype and 17-locus microsatellite genotype of each clone were determined. All populations showed significant population differentiation (F(ST) 0.058-0.202) even over small geographic distances (<50 km). All clones were karyotypically normal except for a subset of clones from one site that was exposed to the carbamate insecticide, Pirimor, the week prior to sampling. Those clones were heterozygous for an autosomal 1,3 translocation frequently associated in M. persicae with insecticide resistance. In contrast to other loci and despite being on different chromosomes, loci myz2(A) and M55(A) showed general and significant linkage disequilibrium. These loci may be affected by epistatic selection. We discuss the observed high clonal diversity, moderate but significant population differentiation, general conformance to Hardy-Weinberg equilibria and low linkage disequilibria with particular focus on the global population biology of M. persicae.


Subject(s)
Aphids/genetics , Genetic Variation , Genetics, Population , Microsatellite Repeats , Parthenogenesis/genetics , Animals , Australia , Crosses, Genetic , Female , Gene Frequency , Genetic Linkage , Genotype , Linkage Disequilibrium , Male , Reproduction
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