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1.
Biochem Biophys Res Commun ; 721: 150025, 2024 Aug 20.
Article in English | MEDLINE | ID: mdl-38768546

ABSTRACT

The causes of Alzheimer's disease (AD) are poorly understood, although many genes are known to be involved in this pathology. To gain insights into the underlying molecular mechanisms, it is essential to identify the relationships between individual AD genes. Previous work has shown that the splice variant E of KLC1 (KLC1_vE) promotes AD, and that the CELF1 gene, which encodes an RNA-binding protein involved in splicing regulation, is at a risk locus for AD. Here, we identified a functional link between CELF1 and KLC1 in AD pathogenesis. Transcriptomic data from human samples from different ethnic groups revealed that CELF1 mRNA levels are low in AD brains, and the splicing pattern of KLC1 is strongly correlated with CELF1 expression levels. Specifically, KLC1_vE is negatively correlated with CELF1. Depletion and overexpression experiments in cultured cells demonstrated that the CELF1 protein down-regulates KLC1_vE. In a cross-linking and immunoprecipitation sequencing (CLIP-seq) database, CELF1 directly binds to KLC1 RNA, following which it likely modulates terminal exon usage, hence KLC1_vE formation. These findings reveal a new pathogenic pathway where a risk allele of CELF1 is associated with reduced CELF1 expression, which up-regulates KLC1_vE to promote AD.


Subject(s)
Alternative Splicing , Alzheimer Disease , CELF1 Protein , Humans , Alzheimer Disease/genetics , Alzheimer Disease/metabolism , Brain/metabolism , CELF1 Protein/metabolism , CELF1 Protein/genetics , RNA, Messenger/genetics , RNA, Messenger/metabolism , RNA-Binding Proteins/metabolism , RNA-Binding Proteins/genetics
2.
Front Microbiol ; 13: 961020, 2022.
Article in English | MEDLINE | ID: mdl-36312950

ABSTRACT

Objective: Inflammatory bowel disease (IBD) is a heterogenous disease in which the microbiome has been shown to play an important role. However, the precise homeostatic or pathological functions played by bacteria remain unclear. Most published studies report taxa-disease associations based on single-technology analysis of a single cohort, potentially biasing results to one clinical protocol, cohort, and molecular analysis technology. To begin to address this key question, precise identification of the bacteria implicated in IBD across cohorts is necessary. Methods: We sought to take advantage of the numerous and diverse studies characterizing the microbiome in IBD to develop a multi-technology meta-analysis (MTMA) as a platform for aggregation of independently generated datasets, irrespective of DNA-profiling technique, in order to uncover the consistent microbial modulators of disease. We report the largest strain-level survey of IBD, integrating microbiome profiles from 3,407 samples from 21 datasets spanning 15 cohorts, three of which are presented for the first time in the current study, characterized using three DNA-profiling technologies, mapping all nucleotide data against known, culturable strain reference data. Results: We identify several novel IBD associations with culturable strains that have so far remained elusive, including two genome-sequenced but uncharacterized Lachnospiraceae strains consistently decreased in both the gut luminal and mucosal contents of patients with IBD, and demonstrate that these strains are correlated with inflammation-related pathways that are known mechanisms targeted for treatment. Furthermore, comparative MTMA at the species versus strain level reveals that not all significant strain associations resulted in a corresponding species-level significance and conversely significant species associations are not always re-captured at the strain level. Conclusion: We propose MTMA for uncovering experimentally testable strain-disease associations that, as demonstrated here, are beneficial in discovering mechanisms underpinning microbiome impact on disease or novel targets for therapeutic interventions.

3.
Int J Environ Res Public Health ; 11(9): 9038-49, 2014 Sep 01.
Article in English | MEDLINE | ID: mdl-25257357

ABSTRACT

The intestinal microbiota and gut immune system must constantly communicate to maintain a balance between tolerance and activation: on the one hand, our immune system should protect us from pathogenic microbes and on the other hand, most of the millions of microbes in and on our body are innocuous symbionts and some can even be beneficial. Since there is such a close interaction between the immune system and the intestinal microbiota, it is not surprising that some lymphomas such as mucosal-associated lymphoid tissue (MALT) lymphoma have been shown to be caused by the presence of certain bacteria. Animal models played an important role in establishing causation and mechanism of bacteria-induced MALT lymphoma. In this review we discuss different ways that animal models have been applied to establish a link between the gut microbiota and lymphoma and how animal models have helped to elucidate mechanisms of microbiota-induced lymphoma. While there are not a plethora of studies demonstrating a connection between microbiota and lymphoma development, we believe that animal models are a system which can be exploited in the future to enhance our understanding of causation and improve prognosis and treatment of lymphoma.


Subject(s)
Intestines/microbiology , Lymphoma/microbiology , Microbiota , Animals , Bacterial Physiological Phenomena , Disease Models, Animal , Humans
4.
Cancer J ; 20(3): 190-4, 2014.
Article in English | MEDLINE | ID: mdl-24855006

ABSTRACT

The intestinal microbiota and gut immune system must communicate to maintain a balance between tolerance and activation. Our immune system protects us from pathogenic microbes at the same time that our bodies are host to trillions of microbes, symbionts, mutualists, and some that are essential to human health. Since there is such a close interaction between the immune system and the intestinal microbiota, it is not surprising that some lymphomas such as mucosal-associated lymphoid tissue lymphoma have been shown to be caused by the presence of certain bacteria. Animal models have played an important role in elucidating the causation and establishing the mechanism of bacteria-induced mucosal-associated lymphoid tissue lymphoma. In this review, we discuss different ways that animal models have been applied to investigate links between the gut microbiota and lymphoma and have helped to reveal the mechanisms of microbiota-induced lymphoma. Although there is a paucity of published studies demonstrating the interplay between the microbiota and lymphoma development, we believe that the connection is real and that it can be exploited in the future to enhance our understanding of causation and to improve the prognosis and treatment of lymphoma.


Subject(s)
Intestines/microbiology , Lymphoma/microbiology , Microbiota , Animals , Disease Models, Animal , Humans
5.
Cancer Res ; 73(14): 4222-32, 2013 Jul 15.
Article in English | MEDLINE | ID: mdl-23860718

ABSTRACT

Ataxia-telangiectasia is a genetic disorder associated with high incidence of B-cell lymphoma. Using an ataxia-telangiectasia mouse model, we compared lymphoma incidence in several isogenic mouse colonies harboring different bacterial communities, finding that intestinal microbiota are a major contributor to disease penetrance and latency, lifespan, molecular oxidative stress, and systemic leukocyte genotoxicity. High-throughput sequence analysis of rRNA genes identified mucosa-associated bacterial phylotypes that were colony-specific. Lactobacillus johnsonii, which was deficient in the more cancer-prone mouse colony, was causally tested for its capacity to confer reduced genotoxicity when restored by short-term oral transfer. This intervention decreased systemic genotoxicity, a response associated with reduced basal leukocytes and the cytokine-mediated inflammatory state, and mechanistically linked to the host cell biology of systemic genotoxicity. Our results suggest that intestinal microbiota are a potentially modifiable trait for translational intervention in individuals at risk for B-cell lymphoma, or for other diseases that are driven by genotoxicity or the molecular response to oxidative stress.


Subject(s)
Inflammation/microbiology , Intestines/microbiology , Lactobacillus/physiology , Leukocytes/microbiology , Lymphoma, B-Cell/metabolism , Lymphoma, B-Cell/microbiology , Animals , Ataxia Telangiectasia/complications , Genomic Instability , Incidence , Lymphoma, B-Cell/genetics , Male , Mice , Mice, Transgenic , Microbiota , Oxidative Stress/physiology
6.
Mutat Res ; 749(1-2): 58-65, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23748015

ABSTRACT

Cigarette smoke causes direct oxidative DNA damage as well as indirect damage through inflammation. Epidemiological studies show a strong relationship between secondhand smoke and cancer; however, the mechanisms of secondhand smoke-induced cancer are not well understood. Animal models with either (i) deficient oxidative DNA damage repair, or (ii) a decreased capacity to combat oxidative stress may help determine the pathways important in mitigating damage caused by smoke. In this study, we used mice lacking Ogg1 and Myh, both of which are involved in base excision repair by removing oxidatively damaged DNA bases. Gclm-deficient mice, which have decreased levels of glutathione (GSH), were used to look at the role of smoke-induced oxidative damage. Ex vivo experiments show significantly elevated levels of DNA single-strand breaks and chromosomal aberrations in peripheral blood lymphocytes from Ogg1(-/-)Myh(-/-) double knockout mice compared to wild type (WT) mice after 24h of exposure to cigarette smoke extract (CSE). The average γH2AX foci per cell was significantly elevated 3h after exposure to CSE in cells from Ogg1(-/-)Myh(-/-) double knockout mice compared to wildtype mice. In vivo we found that all mice had increased markers of DNA damage after exposure to side-stream tobacco smoke (SSTS). Ogg1(-/-)Myh(-/-) and Gclm(-/-) mice had altered levels of peripheral blood glutathione after SSTS exposure whereas wild type mice did not. This may be due to differential regulation of glutathione synthesis in the lung. We also found that Ogg1(-/-)Myh(-/-) mice had a decreased lifespan after oral gavage with benzo[a]pyrene compared to wildtype mice and sham-exposed Ogg1(-/-)Myh(-/-) mice. Our results are important in investigating the roles of oxidative stress and oxidative DNA damage repair in cigarette smoke-induced cancers and characterizing the role of genetic polymorphisms in smoke-related disease susceptibility.


Subject(s)
Blood Cells/drug effects , DNA Repair-Deficiency Disorders/genetics , Glutathione/deficiency , Oxidative Stress/genetics , Tobacco Smoke Pollution/adverse effects , Animals , Blood Cells/metabolism , DNA Damage/drug effects , DNA Damage/genetics , DNA Glycosylases/genetics , DNA Repair-Deficiency Disorders/blood , DNA Repair-Deficiency Disorders/pathology , Female , Glutamate-Cysteine Ligase/genetics , Glutathione/metabolism , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Oxidative Stress/drug effects
7.
Radiat Res ; 175(2): 231-9, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21268717

ABSTRACT

As therapeutic uses of high-LET radiation become more prevalent and human space exploration continues to be a focus of NASA, it is important to understand the biological effects of high-LET radiation and the role of genetics in sensitivity to high-LET radiation. To study genetic susceptibility to radiation, we used mice deficient in Atm activity (AtmΔSRI). ATM is important in DNA repair, apoptosis and cell cycle regulation. Although homozygous mutations in ATM are rare, the prevalence of ATM heterozygosity is estimated to be 1% and results in an increased cancer risk. We found that the effects of 1 Gy 1 GeV/nucleon 56Fe particles on life span and tumorigenesis are genotype- and sex-specific. Significant effects of 1 Gy 1 GeV/nucleon 56Fe particles on incidence of non-cancer end points were seen; however, 2 Gy 1 GeV/nucleon 56Fe particles significantly affected neuromotor ability. Our results represent an extensive investigation into the late effects of high-LET radiation exposure in a sex- and genotype-dependent manner and provide a baseline for understanding the long-term risks of high-LET radiation.


Subject(s)
Cell Cycle Proteins/physiology , DNA-Binding Proteins/physiology , Heavy Ions , Iron , Longevity/drug effects , Motor Activity/radiation effects , Neoplasms, Radiation-Induced/etiology , Protein Serine-Threonine Kinases/physiology , Tumor Suppressor Proteins/physiology , Animals , Ataxia Telangiectasia Mutated Proteins , Cell Cycle Proteins/genetics , DNA-Binding Proteins/deficiency , DNA-Binding Proteins/genetics , Female , Genotype , Glutathione/metabolism , Linear Energy Transfer , Male , Mice , Protein Serine-Threonine Kinases/deficiency , Protein Serine-Threonine Kinases/genetics , Sex Factors , Tumor Suppressor Proteins/deficiency , Tumor Suppressor Proteins/genetics
8.
Cancer Res ; 70(23): 9703-10, 2010 Dec 01.
Article in English | MEDLINE | ID: mdl-21118969

ABSTRACT

Fanconi anemia (FA) results from mutations in the FANC genes and is characterized by bone marrow failure, birth defects, and a high incidence of cancer. FANCG is a part of the FA core complex that is responsible for monoubiquitination of FANCD2 and FANCI. The precise role of the FA pathway is not well understood, although it may be involved in homologous recombination (HR), nonhomologous end joining, and translesion synthesis (TLS). Fancd2(-/-) mice have a more severe phenotype than Fancg(-/-), and other FA core complex-deficient mice, although both Fancg and Fancd2 belong to the same FA pathway. We hypothesized that Fancd2 deficiency results in a more severe phenotype because Fancd2 also has a FA pathway-independent function in the maintenance of genomic integrity. To test this hypothesis, we determined the level of DNA damage and genomic instability in Fancd2(-/-), Fancg(-/-), and wild-type controls. Fancd2(-/-) mice displayed a higher magnitude of chromosomal breakage and micronucleus formation than the wild-type or Fancg(-/-) mice. Also, DNA strand breaks were increased in Fancd2(-/-) but not in Fancg(-/-) mice. In addition, Fancd2(-/-) mice displayed an elevated frequency of DNA deletions, resulting from HR at the endogenous p(un) locus. In contrast, in Fancg(-/-) mice, the frequency of DNA deletions was decreased. Thus, Fancd2 but not Fancg deficiency results in elevated chromosomal/DNA breakage and permanent genome rearrangements. This provides evidence that Fancd2 plays an additional role in the maintenance of genomic stability than Fancg, which might explain the higher predisposition to cancer seen in the Fancd2(-/-) mice.


Subject(s)
Fanconi Anemia Complementation Group D2 Protein/genetics , Fanconi Anemia Complementation Group G Protein/genetics , Fanconi Anemia/genetics , Genomic Instability , Animals , Chromosome Breakage , Comet Assay , DNA Damage , Fanconi Anemia/metabolism , Fanconi Anemia Complementation Group D2 Protein/deficiency , Fanconi Anemia Complementation Group G Protein/deficiency , Female , Gene Deletion , Male , Mice , Mice, 129 Strain , Mice, Inbred C57BL , Mice, Knockout , Micronuclei, Chromosome-Defective , Micronucleus Tests , Recombination, Genetic , Retinal Pigment Epithelium/metabolism
9.
Dement Geriatr Cogn Disord ; 30(4): 302-8, 2010.
Article in English | MEDLINE | ID: mdl-20881395

ABSTRACT

BACKGROUND/AIMS: A single-nucleotide polymorphism (SNP) in the KIBRA gene, rs17070145, was reported to be significantly associated with episodic memory in cognitively normal cohorts. This observation has expanded genetic studies on KIBRA to Alzheimer's disease (AD). Importantly, the association between KIBRA and episodic memory in AD has never been addressed. In this study, we investigated whether the KIBRA rs17070145 SNP influences AD episodic memory and the disease in a Japanese cohort. METHODS: Blood samples from 346 AD patients and 375 normal cognitive controls were collected and genotyped for rs17070145. Episodic memory was measured in 32 AD patients, diagnosed for the first time, by use of the Rivermead Behavioral Memory Test (RBMT). RESULTS: We found that KIBRA C allele carriers scored significantly lower than KIBRA non-C carriers on both RBMT total profile score (p = 0.042, effect size = 0.84) and RBMT total screening score (p < 0.001, effect size = 1.42). The KIBRA gene did not show association with AD in our Japanese cohort. CONCLUSION: Our results evidence a strong association between the KIBRA gene and episodic memory impairment in AD, but show no influence on AD in our Japanese cohort. We propose that KIBRA might have an effect similar to cognitive reserve.


Subject(s)
Alzheimer Disease/genetics , Asian People/genetics , Mental Recall/physiology , Proteins/genetics , Aged , Alzheimer Disease/ethnology , Analysis of Variance , Case-Control Studies , Cohort Studies , Female , Humans , Intracellular Signaling Peptides and Proteins , Japan , Male , Middle Aged , Neuropsychological Tests , Phosphoproteins , Polymorphism, Single Nucleotide , Reference Values
10.
Neurosci Lett ; 461(2): 177-80, 2009 Sep 18.
Article in English | MEDLINE | ID: mdl-19539718

ABSTRACT

A recent study reported that variants of the neuronal sortilin-related receptor gene (SORL1) increased the risk of late-onset Alzheimer disease (AD) in several populations. Here, we examined the risk effect in a large, well-characterized group of 437 late-onset AD patients and 451 control subjects in a Japanese population. Among eight single-nucleotide polymorphisms (SNPs) of the SORL1 gene for which association has been reported, we found a significant association for four of them, located between exon 24 and intron 37. This risk was evident in non-carriers of the apolipoprotein E-epsilon 4 allele, but not in its carriers. Our results support the evidence that genetic variants of SORL1 affect susceptibility to late-onset AD.


Subject(s)
Alzheimer Disease/genetics , LDL-Receptor Related Proteins/genetics , Membrane Transport Proteins/genetics , Age of Onset , Aged , Asian People , Case-Control Studies , Female , Genetic Predisposition to Disease , Humans , Japan , Linkage Disequilibrium , Male , Polymorphism, Single Nucleotide
11.
Bioorg Med Chem Lett ; 19(1): 199-202, 2009 Jan 01.
Article in English | MEDLINE | ID: mdl-19013793

ABSTRACT

The P4 region of a series of oxamyl dipeptide caspase inhibitors was optimized by the combination of anti-apoptotic activity in the Jurkat/Fas (JFas) cellular assay and membrane permeability in the PAMPA assay. Two highly potent anti-apoptotic agents with moderate membrane permeability, 29 and 36, showed strong in vivo efficacy in a murine model of alpha-Fas-induced liver injury.


Subject(s)
Caspase Inhibitors , Cysteine Proteinase Inhibitors/chemical synthesis , Liver Diseases/drug therapy , Animals , Apoptosis/drug effects , Cell Membrane Permeability/drug effects , Cysteine Proteinase Inhibitors/pharmacology , Humans , Jurkat Cells , Mice , Structure-Activity Relationship , fas Receptor
12.
Mutat Res ; 644(1-2): 11-6, 2008 Sep 26.
Article in English | MEDLINE | ID: mdl-18639560

ABSTRACT

Werner syndrome (WS) is a rare genetic disorder characterized by accelerated aging and aging-related diseases including cancer. WS is caused by autosomal recessive mutations in the WRN gene, which is involved in genome maintenance although precise functions of WRN are not well understood. To further investigate the role of WRN, we used transgenic mice over-expressing a human helicase mutant WRN gene (hMW). We determined homologous recombination (HR) events leading to 70 kb deletions in the p(un) locus visualized as pigmented cells in the retinal pigment epithelium. hMW mice had an increased spontaneous frequency of DNA deletions compared to control mice, consistent with WRN involvement in HR suppression. In addition, 4-nitroquinoline 1-oxide (4-NQO), which can cause both oxidative stress and DNA adduct formation, significantly increased the frequency of DNA deletions in both control and hMW mice. In order to assess how oxidative stress may modulate this phenotype, we treated mice with the glutathione (GSH) synthesis inhibitor, buthionine sulfoximine (BSO). The frequency of DNA deletions increased significantly in control mice, but not in hMW littermates. To elucidate the cause of this discrepancy, we determined total GSH levels as a measure of anti-oxidative defense. BSO significantly decreased GSH levels in both hMW mice and control mice, while 4-NQO increased GSH levels in all mice. These findings suggest that the reduction of GSH by BSO or compensatory increase of GSH by 4-NQO had little impact on hMW mice in which HR repair is compromised. Therefore, oxidative stress impacts HR repair in hMW mice less than control mice and effects of the mutated gene may be exacerbated by direct DNA damage from 4-NQO. This mouse model of WS in conjunction with different DNA damaging agents may provide insight into mechanisms of genomic instability, DNA repair, and carcinogenesis.


Subject(s)
Exodeoxyribonucleases/genetics , Exodeoxyribonucleases/metabolism , RecQ Helicases/genetics , RecQ Helicases/metabolism , Recombination, Genetic , Sequence Deletion , 4-Nitroquinoline-1-oxide/pharmacology , Animals , Buthionine Sulfoximine/pharmacology , DNA/genetics , DNA Damage , DNA Repair , Disease Models, Animal , Female , Genomic Instability , Glutathione/metabolism , Humans , Mice , Mice, Inbred C57BL , Mice, Transgenic , Oxidative Stress , Pigment Epithelium of Eye/metabolism , Pregnancy , Werner Syndrome/genetics , Werner Syndrome/metabolism , Werner Syndrome Helicase
13.
J Hum Genet ; 53(4): 296-302, 2008.
Article in English | MEDLINE | ID: mdl-18236001

ABSTRACT

Alzheimer disease (AD) is characterized by progressive cognitive decline caused by synaptic dysfunction and neurodegeneration in the brain, and late-onset AD (LOAD), genetically classified as a polygenetic disease, is the major form of dementia in the elderly. It has been shown that beta amyloid, deposited in the AD brain, interacts with dynamin 1 and that the dynamin 2 (DNM2) gene homologous to the dynamin 1 gene is encoded at chromosome 19p13.2 where a susceptibility locus has been detected by linkage analysis. To test the genetic association of LOAD with the DNM2 gene, we performed a case-control study of 429 patients with LOAD and 438 sex- and age-matched control subjects in a Japanese population. We found a significant association of LOAD with single nucleotide polymorphism markers of the DNM2 gene, especially in non-carriers of the apolipoprotein E-epsilon4 allele. Even though subjects with the genotype homozygous for the risk allele at rs892086 showed no mutation in exons of the DNM2 gene, expression of DNM2 mRNA in the hippocampus was decreased in the patients compared to non-demented controls. We propose that the DNM2 gene is a novel susceptibility gene for LOAD.


Subject(s)
Alzheimer Disease/genetics , Dynamin II/genetics , Genetic Predisposition to Disease/genetics , Genotype , Humans , Linkage Disequilibrium , Polymorphism, Single Nucleotide , Sequence Analysis, DNA
14.
J Pharmacol Sci ; 105(2): 201-5, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17928737

ABSTRACT

In a mouse model of alpha-Fas-induced acute liver injury, the orally-administered caspase inhibitor PF-03491390 (formerly named IDN-6556) was retained in the liver for prolonged periods with a low systemic exposure. Reductions in the elevated plasma levels of alanine aminotransferase (ALT) revealed that the retention of PF-03491390 in the liver exerted a hepatoprotective effect, even when pre-administered to mice 4 h before alpha-Fas insult. Prolonged retention of PF-03491390 in the liver after oral administration has the benefit of low systemic exposure, making this a beneficial agent for the treatment of liver diseases.


Subject(s)
Caspase Inhibitors , Enzyme Inhibitors/pharmacology , Liver Diseases/drug therapy , Pentanoic Acids/pharmacology , Administration, Oral , Alanine Transaminase/blood , Alanine Transaminase/drug effects , Animals , Antibodies, Monoclonal/toxicity , Antibodies, Monoclonal, Murine-Derived , Apoptosis/drug effects , Chemical and Drug Induced Liver Injury , Disease Models, Animal , Drug Administration Schedule , Drug Delivery Systems , Enzyme Inhibitors/administration & dosage , Enzyme Inhibitors/pharmacokinetics , Liver/metabolism , Male , Mice , Mice, Inbred BALB C , Pentanoic Acids/administration & dosage , Pentanoic Acids/pharmacokinetics , Tissue Distribution
15.
Hum Mol Genet ; 16(1): 15-23, 2007 Jan 01.
Article in English | MEDLINE | ID: mdl-17135279

ABSTRACT

We scanned throughout chromosome 21 to assess genetic associations with late-onset Alzheimer disease (AD) using 374 Japanese patients and 375 population-based controls, because trisomy 21 is known to be associated with early deposition of beta-amyloid (Abeta) in the brain. Among 417 markers spanning 33 Mb, 22 markers showed associations with either the allele or the genotype frequency (P < 0.05). Logistic regression analysis with age, sex and apolipoprotein E (APOE)-epsilon4 dose supported genetic risk of 17 markers, of which eight markers were linked to the SAMSN1, PRSS7, NCAM2, RUNX1, DYRK1A and KCNJ6 genes. In logistic regression, the DYRK1A (dual-specificity tyrosine-regulated kinase 1A) gene, located in the Down syndrome critical region, showed the highest significance [OR = 2.99 (95% CI: 1.72-5.19), P = 0.001], whereas the RUNX1 gene showed a high odds ratio [OR = 23.3 (95% CI: 2.76-196.5), P = 0.038]. DYRK1A mRNA level in the hippocampus was significantly elevated in patients with AD when compared with pathological controls (P < 0.01). DYRK1A mRNA level was upregulated along with an increase in the Abeta-level in the brain of transgenic mice, overproducing Abeta at 9 months of age. In neuroblastoma cells, Abeta induced an increase in the DYRK1A transcript, which also led to tau phosphorylation at Thr212 under the overexpression of tau. Therefore, the upregulation of DYRK1A transcription results from Abeta loading, further leading to tau phosphorylation. Our result indicates that DYRK1A could be a key molecule bridging between beta-amyloid production and tau phosphorylation in AD.


Subject(s)
Alzheimer Disease/metabolism , Amyloid beta-Peptides/biosynthesis , Chromosomes, Human, Pair 21/genetics , Down Syndrome/genetics , Membrane Proteins/metabolism , Protein Serine-Threonine Kinases/genetics , Protein-Tyrosine Kinases/genetics , Aged , Aged, 80 and over , Alzheimer Disease/genetics , Animals , Brain/metabolism , Case-Control Studies , Cell Line, Tumor , Female , Haplotypes , Humans , Male , Mice , Mice, Transgenic , Middle Aged , Phosphorylation , Polymorphism, Single Nucleotide , Protein Serine-Threonine Kinases/metabolism , Protein-Tyrosine Kinases/metabolism , RNA, Messenger/metabolism , Dyrk Kinases
16.
Toxicol Lett ; 158(2): 95-107, 2005 Aug 14.
Article in English | MEDLINE | ID: mdl-16039398

ABSTRACT

Marijuana smoking is associated with inflammation, cellular atypia, and molecular dysregulation of the tracheobronchial epithelium. While marijuana smoke shares many components in common with tobacco, it also contains a high concentration of Delta9-tetrahydrocannabinol (THC). The potential contribution of THC to airway injury was assessed by exposing primary cultures of human small airway epithelial (SAE) cells to THC (0.1-10.0 microg/ml) for either 1 day or 7 days. THC induced a time- and concentration-dependent decrease in cell viability, ATP level, and mitochondrial membrane potential. Using a targeted gene expression array, we observed acute changes (24 h) in the expression of mRNA for caspase-8, catalase, Bax, early growth response-1, cytochrome P4501A1 (CYP1A1), metallothionein 1A, PLAB, and heat shock factor 1 (HSF1). After 7 days of exposure, decrease in expression of mRNA for heat shock proteins (HSPs) and the pro-apoptotic protein Bax was observed, while expression of GADD45A, IL-1A, CYP1A1, and PTGS-2 increased significantly. These findings suggest a contribution of THC to DNA damage, inflammation, and alterations in apoptosis. Treatment with selected prototypical toxicants, 2,3,7,8-tetrachlorodibenznzo-p-dioxin (TCDD) and carbonyl cyanide-p-(trifluoramethoxy)-phenyl hydrazone (FCCP), produced partially overlapping gene expression profiles suggesting some similarity in mechanism of action with THC. THC, delivered as a component of marijuana smoke, may induce a profile of gene expression that contributes to the pulmonary pathology associated with marijuana use.


Subject(s)
Dronabinol/toxicity , Epithelial Cells/drug effects , Gene Expression/drug effects , Hallucinogens/toxicity , Respiratory Mucosa/drug effects , Adenosine Triphosphate , Cell Survival/drug effects , Cells, Cultured , Dose-Response Relationship, Drug , Epithelial Cells/metabolism , Epithelial Cells/pathology , Humans , Marijuana Abuse , Membrane Potentials/drug effects , Mitochondria/drug effects , Oligonucleotide Array Sequence Analysis , RNA, Messenger/metabolism , Respiratory Mucosa/metabolism , Respiratory Mucosa/pathology
17.
J Bacteriol ; 187(14): 5044-8, 2005 Jul.
Article in English | MEDLINE | ID: mdl-15995226

ABSTRACT

Certain genes from Lactococcus lactis and Pseudomonas aeruginosa, including the nfxB gene, generate a mutator phenotype in Escherichia coli. The results of this study, together with those of a previous study, support conservation of regulatory sequences in E. coli and P. aeruginosa and suggest that some efflux pumps prevent mutagenicity by exporting mutagenic products of metabolism.


Subject(s)
Escherichia coli/genetics , Gene Expression Regulation, Bacterial , Pseudomonas aeruginosa/genetics , Base Sequence , Cloning, Molecular , DNA Primers , DNA, Bacterial/genetics , Genes, Bacterial , Mutagenesis, Insertional , Polymerase Chain Reaction , Restriction Mapping
18.
Genetics ; 170(1): 345-53, 2005 May.
Article in English | MEDLINE | ID: mdl-15781699

ABSTRACT

All-trans-retinoic acid (RA) induces various anatomical limb dysmorphologies in mice dependent on the time of exposure. During early limb development, RA induces forelimb ectrodactyly (digital absence) with varying susceptibilities for different inbred mouse strains; C57BL/6N are highly susceptible while SWV are resistant. To isolate the genetic basis of this defect, a full-genome scan was performed in 406 backcross fetuses of F(1) males to C57BL/6N females. Fetuses were exposed via a maternal injection of 75 mg of RA per kilogram of body weight on gestational day 9.25. The genome-wide analysis revealed significant linkage to a chromosome 11 locus near D11Mit39 with a maximum LOD score of 9.0 and to a chromosome 4 locus near D4Mit170. An epistatic interaction was detected between loci on chromosome 11 (D11Mit39) and chromosome 18 (D18Mit64). Linkage to the chromosome 11 locus (D11Mit39) was confirmed in RA-treated backcross fetuses of F(1) females to C57BL/6N males. Loci associated with bone density/mass in both human and mouse were previously detected in the same region, suggesting a mechanistic linkage with bone homeostasis. The human syntenic region of this locus has been previously linked to Meckel syndrome; the phenotype includes postaxial polydactyly, an ectopic digital defect hypothesized to be induced by a common molecular pathway with ectrodactyly.


Subject(s)
Forelimb/abnormalities , Keratolytic Agents/pharmacology , Limb Deformities, Congenital/chemically induced , Limb Deformities, Congenital/genetics , Tretinoin/pharmacology , Animals , Chromosome Mapping , Crosses, Genetic , Epistasis, Genetic , Female , Humans , Inbreeding , Lod Score , Male , Mice , Mice, Inbred C57BL , Phenotype
19.
Eur J Pharmacol ; 507(1-3): 29-34, 2005 Jan 10.
Article in English | MEDLINE | ID: mdl-15659291

ABSTRACT

Antinociceptive effect of a tachykinin NK1 receptor antagonist ezlopitant [(2S,3S-cis)-2-(diphenylmethyl)-N-{(2-methoxy, 5-isopropylphenyl)methyl}-1-azabicyclo[2.2.2]octan-3-amine] was investigated in the 4beta-phorbol-12-myristate-13-acetate (PMA)-induced nociceptive test in the rat. Intraplantar injection of PMA-induced paw-licking and flinching behaviour lasted up to 120 min and was accompanied by inflammatory reactions, such as swelling and invasion of granulocytes. Pretreatment with resiniferatoxin [200 microg/kg, subcutaneous (s.c.)] blocked the PMA-induced nociceptive behaviour, suggesting that vanilloid VR1 receptor-expressing primary sensory neurons play a major role in this response. Subcutaneous pretreatment with ezlopitant (0.3-30 mg/kg) and morphine (0.3-6 mg/kg) caused a dose-dependent inhibition of the behaviour. Ezlopitant (3-30 mg/kg) given subcutaneously after PMA injection also significantly attenuated the behavioural response. When administered intrathecally, ezlopitant and a nonselective glutamate receptor antagonist MK-801 had an inhibitory effect, whereas CJ-12,191, an inactive isomer of ezlopitant, was unaffected. These results suggest that spinal tachykinin NK1 receptors contribute to processing of ongoing pain associated with peripheral inflammation.


Subject(s)
Benzylamines/pharmacology , Bridged Bicyclo Compounds, Heterocyclic/pharmacology , Neurokinin-1 Receptor Antagonists , Pain Measurement/drug effects , Phorbol Esters/chemistry , Phorbol Esters/pharmacology , Analgesics/pharmacology , Animals , Dose-Response Relationship, Drug , Male , Pain Measurement/methods , Rats , Rats, Sprague-Dawley , Receptors, Neurokinin-1/physiology
20.
Pflugers Arch ; 449(1): 76-87, 2004 Oct.
Article in English | MEDLINE | ID: mdl-15290301

ABSTRACT

Small dorsal root ganglion neurons express preferentially the Na+ channel isoform Na(v)1.9 that mediates a tetrodotoxin-resistant (TTX-R) Na+ current. We investigated properties of the Na+ current mediated by Na(v)1.9 (I(NaN)) using the whole-cell, patch-clamp recording technique. To isolate I(NaN) from heterogeneous TTX-R Na+ currents that also contain another type of TTX-R Na+ current mediated by Na(v)1.8, we used Na(v)1.8-null mutant mice. When F- was used as an internal anion in the patch pipette solution, both the activation and inactivation kinetics for I(NaN) shifted in the hyperpolarizing direction with time. Such a time-dependent shift of the kinetics was not observed when Cl- was used as an internal anion. Functional expression of I(NaN) declined with time after cell dissociation and recovered during culture, implying that Na(v)1.9 may be regulated dynamically by trophic factors or depend on subtle environmental factors for its survival. During whole-cell recordings, the peak amplitude of I(NaN) increased dramatically after a variable delay, as if inactive or silent channels had been "kindled". Such an unusual increase of the amplitude could be prevented by adding ATP to the pipette solution or by recording with the nystatin-perforated patch-clamp technique, suggesting that the rupture of patch membrane affected the behaviour of Na(v)1.9. These peculiar properties of I(NaN) may provide an insight into the plasticity of Na+ channels that are related to pathological functions of Na+ channels accompanying abnormal pain states.


Subject(s)
Ganglia, Spinal/cytology , Neurons/metabolism , Neuropeptides/metabolism , Protein Isoforms/metabolism , Sodium Channels/metabolism , Adenosine Triphosphate/metabolism , Animals , Cells, Cultured , Chlorides/metabolism , Hippocampus/cytology , Hippocampus/metabolism , Ion Channel Gating , Mice , NAV1.9 Voltage-Gated Sodium Channel , Neurons/cytology , Neuropeptides/genetics , Patch-Clamp Techniques , Protein Isoforms/genetics , Sodium Channels/genetics , Tetrodotoxin/metabolism
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