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1.
Nat Commun ; 15(1): 4025, 2024 May 13.
Article in English | MEDLINE | ID: mdl-38740804

ABSTRACT

Intracellular membranes composing organelles of eukaryotes include membrane proteins playing crucial roles in physiological functions. However, a comprehensive understanding of the cellular responses triggered by intracellular membrane-focused oxidative stress remains elusive. Herein, we report an amphiphilic photocatalyst localised in intracellular membranes to damage membrane proteins oxidatively, resulting in non-canonical pyroptosis. Our developed photocatalysis generates hydroxyl radicals and hydrogen peroxides via water oxidation, which is accelerated under hypoxia. Single-molecule magnetic tweezers reveal that photocatalysis-induced oxidation markedly destabilised membrane protein folding. In cell environment, label-free quantification reveals that oxidative damage occurs primarily in membrane proteins related to protein quality control, thereby aggravating mitochondrial and endoplasmic reticulum stress and inducing lytic cell death. Notably, the photocatalysis activates non-canonical inflammasome caspases, resulting in gasdermin D cleavage to its pore-forming fragment and subsequent pyroptosis. These findings suggest that the oxidation of intracellular membrane proteins triggers non-canonical pyroptosis.


Subject(s)
Inflammasomes , Membrane Proteins , Oxidation-Reduction , Pyroptosis , Humans , Inflammasomes/metabolism , Membrane Proteins/metabolism , Oxidative Stress , Catalysis , Endoplasmic Reticulum Stress , Hydrogen Peroxide/metabolism , Phosphate-Binding Proteins/metabolism , Hydroxyl Radical/metabolism , Mitochondria/metabolism , Intracellular Membranes/metabolism , Intracellular Signaling Peptides and Proteins/metabolism , Mice , Animals , Photochemical Processes , Protein Folding , Caspases/metabolism , Gasdermins
2.
Nat Commun ; 11(1): 5495, 2020 10 30.
Article in English | MEDLINE | ID: mdl-33127907

ABSTRACT

Protecting replication fork integrity during DNA replication is essential for maintaining genome stability. Here, we report that SDE2, a PCNA-associated protein, plays a key role in maintaining active replication and counteracting replication stress by regulating the replication fork protection complex (FPC). SDE2 directly interacts with the FPC component TIMELESS (TIM) and enhances its stability, thereby aiding TIM localization to replication forks and the coordination of replisome progression. Like TIM deficiency, knockdown of SDE2 leads to impaired fork progression and stalled fork recovery, along with a failure to activate CHK1 phosphorylation. Moreover, loss of SDE2 or TIM results in an excessive MRE11-dependent degradation of reversed forks. Together, our study uncovers an essential role for SDE2 in maintaining genomic integrity by stabilizing the FPC and describes a new role for TIM in protecting stalled replication forks. We propose that TIM-mediated fork protection may represent a way to cooperate with BRCA-dependent fork stabilization.


Subject(s)
Cell Cycle Proteins/metabolism , DNA Replication/physiology , DNA-Binding Proteins/metabolism , Intracellular Signaling Peptides and Proteins/metabolism , Cell Cycle Proteins/genetics , Checkpoint Kinase 1/metabolism , Chromosome Structures/metabolism , DNA Damage , DNA Repair , DNA Replication/genetics , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , Gene Expression Regulation , Gene Knockdown Techniques , Genomic Instability/physiology , HEK293 Cells , Humans , Intracellular Signaling Peptides and Proteins/genetics , MRE11 Homologue Protein/metabolism , Nuclear Proteins/metabolism , Phosphorylation , Protein Domains
3.
Nucleic Acids Res ; 48(6): 3328-3342, 2020 04 06.
Article in English | MEDLINE | ID: mdl-32002546

ABSTRACT

Monoubiquitination of the Fanconi anemia complementation group D2 (FANCD2) protein by the FA core ubiquitin ligase complex is the central event in the FA pathway. FANCA and FANCG play major roles in the nuclear localization of the FA core complex. Mutations of these two genes are the most frequently observed genetic alterations in FA patients, and most point mutations in FANCA are clustered in the C-terminal domain (CTD). To understand the basis of the FA-associated FANCA mutations, we determined the cryo-electron microscopy (EM) structures of Xenopus laevis FANCA alone at 3.35 Å and 3.46 Å resolution and two distinct FANCA-FANCG complexes at 4.59 and 4.84 Å resolution, respectively. The FANCA CTD adopts an arc-shaped solenoid structure that forms a pseudo-symmetric dimer through its outer surface. FA- and cancer-associated point mutations are widely distributed over the CTD. The two different complex structures capture independent interactions of FANCG with either FANCA C-terminal HEAT repeats, or the N-terminal region. We show that mutations that disturb either of these two interactions prevent the nuclear localization of FANCA, thereby leading to an FA pathway defect. The structure provides insights into the function of FANCA CTD, and provides a framework for understanding FA- and cancer-associated mutations.


Subject(s)
Fanconi Anemia Complementation Group A Protein/ultrastructure , Fanconi Anemia Complementation Group D2 Protein/ultrastructure , Fanconi Anemia Complementation Group G Protein/ultrastructure , Fanconi Anemia/genetics , Animals , Cell Nucleus/genetics , Cell Nucleus/ultrastructure , Cryoelectron Microscopy , Crystallography, X-Ray , DNA-Binding Proteins/genetics , DNA-Binding Proteins/ultrastructure , Fanconi Anemia/pathology , Fanconi Anemia Complementation Group A Protein/genetics , Fanconi Anemia Complementation Group D2 Protein/genetics , Fanconi Anemia Complementation Group G Protein/chemistry , Humans , Multiprotein Complexes/chemistry , Multiprotein Complexes/genetics , Mutation , Protein Binding/genetics , Protein Conformation , Xenopus laevis/genetics
4.
Hum Mol Genet ; 29(7): 1083-1095, 2020 05 08.
Article in English | MEDLINE | ID: mdl-31628488

ABSTRACT

Fanconi anemia (FA) is a chromosome instability syndrome characterized by increased cancer predisposition. Specifically, the FA pathway functions to protect genome stability during DNA replication. The central FA pathway protein, FANCD2, locates to stalled replication forks and recruits homologous recombination (HR) factors such as CtBP interacting protein (CtIP) to promote replication fork restart while suppressing new origin firing. Here, we identify alpha-thalassemia retardation syndrome X-linked (ATRX) as a novel physical and functional interaction partner of FANCD2. ATRX is a chromatin remodeler that forms a complex with Death domain-associated protein 6 (DAXX) to deposit the histone variant H3.3 into specific genomic regions. Intriguingly, ATRX was recently implicated in replication fork recovery; however, the underlying mechanism(s) remained incompletely understood. Our findings demonstrate that ATRX forms a constitutive protein complex with FANCD2 and protects FANCD2 from proteasomal degradation. ATRX and FANCD2 localize to stalled replication forks where they cooperate to recruit CtIP and promote MRE11 exonuclease-dependent fork restart while suppressing the firing of new replication origins. Remarkably, replication restart requires the concerted histone H3 chaperone activities of ATRX/DAXX and FANCD2, demonstrating that coordinated histone H3 variant deposition is a crucial event during the reinitiation of replicative DNA synthesis. Lastly, ATRX also cooperates with FANCD2 to promote the HR-dependent repair of directly induced DNA double-stranded breaks. We propose that ATRX is a novel functional partner of FANCD2 to promote histone deposition-dependent HR mechanisms in S-phase.


Subject(s)
Co-Repressor Proteins/genetics , Fanconi Anemia Complementation Group D2 Protein/genetics , Fanconi Anemia/genetics , Molecular Chaperones/genetics , X-linked Nuclear Protein/genetics , Cell Line , Chromatin/genetics , Chromatin Assembly and Disassembly/genetics , DNA Breaks, Double-Stranded , DNA Repair/genetics , DNA Replication/genetics , Fanconi Anemia/pathology , Gene Knockout Techniques/methods , Histones/genetics , Humans , MRE11 Homologue Protein/genetics , Rad51 Recombinase/genetics , Recombinational DNA Repair/genetics , Signal Transduction/genetics
5.
Nutrients ; 9(7)2017 Jun 23.
Article in English | MEDLINE | ID: mdl-28644409

ABSTRACT

Obesity-induced hypothalamic inflammation is characterized by activation of microglia, which are resident macrophages of the central nervous system, and is implicated in the derangement of energy homeostasis, metabolic complications, and neurodegenerative diseases. Quercetin, a naturally occurring flavonoid, is known to protect against oxidative stress and inflammation-related metabolic complications. Here, we demonstrate that quercetin reduces obesity-induced hypothalamic inflammation by inhibiting microglia-mediated inflammatory responses, and the beneficial action of quercetin is associated with heme oxygenase (HO-1) induction. Quercetin markedly reduced the production of inflammatory mediators (monocyte chemoattractant protein (MCP)-1, interleukin (IL-6), IL-1ß, nitric oxide) by microglia stimulated with saturated fatty acid palmitate and/or lipid-laden microglia-conditioned medium. Quercetin also upregulated the expression of HO-1 in palmitate-treated lipid-laden microglia, and the actions of quercetin against microglia activation accompanied by IκBα degradation were abolished by a HO-1 inhibitor. Moreover, quercetin supplementation reduced the levels of inflammatory cytokines and microglia activation markers in the hypothalamus of high fat diet (HFD)-fed obese mice, which was accompanied by upregulation of HO-1. These findings indicate that quercetin suppresses microglia-mediated inflammatory responses via the induction of HO-1, and hence protects against obesity-induced hypothalamic inflammation.


Subject(s)
Heme Oxygenase-1/metabolism , Hypothalamus/pathology , Inflammation/chemically induced , Membrane Proteins/metabolism , Microglia/drug effects , Obesity/complications , Quercetin/pharmacology , Animals , Cell Culture Techniques , Cell Line , Culture Media, Conditioned , Diet, High-Fat/adverse effects , Dietary Fats/administration & dosage , Dietary Fats/adverse effects , Gene Expression Regulation/drug effects , Heme Oxygenase-1/genetics , Inflammation/drug therapy , Male , Membrane Proteins/genetics , Mice , Obesity/chemically induced , Random Allocation
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