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1.
J Chem Phys ; 161(1)2024 Jul 07.
Article in English | MEDLINE | ID: mdl-38949583

ABSTRACT

In this work, we introduce a differentiable implementation of the local natural orbital coupled cluster (LNO-CC) method within the automatic differentiation framework of the PySCFAD package. The implementation is comprehensively tuned for enhanced performance, which enables the calculation of first-order static response properties on medium-sized molecular systems using coupled cluster theory with single, double, and perturbative triple excitations [CCSD(T)]. We evaluate the accuracy of our method by benchmarking it against the canonical CCSD(T) reference for nuclear gradients, dipole moments, and geometry optimizations. In addition, we demonstrate the possibility of property calculations for chemically interesting systems through the computation of bond orders and Mössbauer spectroscopy parameters for a [NiFe]-hydrogenase active site model, along with the simulation of infrared spectra via ab initio LNO-CC molecular dynamics for a protonated water hexamer.

2.
J Chem Theory Comput ; 20(1): 134-142, 2024 Jan 09.
Article in English | MEDLINE | ID: mdl-38113195

ABSTRACT

We develop a local correlation variant of auxiliary-field quantum Monte Carlo (AFQMC) based on local natural orbitals (LNO-AFQMC). In LNO-AFQMC, independent AFQMC calculations are performed for each localized occupied orbital using a truncated set of tailored orbitals. Because the size of this space does not grow with the system size for a target accuracy, the method has linear scaling. Applying LNO-AFQMC to molecular problems containing a few hundred to a thousand orbitals, we demonstrate convergence of total energies with significantly reduced costs. The savings are more significant for larger systems and larger basis sets. However, even for our smallest system studied, we find that LNO-AFQMC is cheaper than canonical AFQMC, in contrast with many other reduced-scaling methods. Perhaps most significantly, we show that energy differences converge much more quickly than total energies, making the method ideal for applications in chemistry and material science. Our work paves the way for linear scaling AFQMC calculations of strongly correlated systems, which would have a transformative effect on ab initio quantum chemistry.

3.
J Phys Chem Lett ; 14(46): 10435-10441, 2023 Nov 23.
Article in English | MEDLINE | ID: mdl-37956873

ABSTRACT

Attaining kJ/mol accuracy in cohesive energy for molecular crystals is a persistent challenge in computational materials science. In this study, we evaluate second-order Møller-Plesset perturbation theory (MP2) and its spin-component scaled models for calculating cohesive energies for 23 molecular crystals (X23 data set). Using periodic boundary conditions and Brillouin zone sampling, we converge results to the thermodynamic and complete basis set limits, achieving an accuracy of about 2 kJ/mol (0.5 kcal/mol), which is rarely achieved in previous MP2 calculations for molecular crystals. When compared to experimental data, our results have a mean absolute error of 12.9 kJ/mol, comparable to Density Functional Theory with the PBE functional and TS dispersion correction. By separately scaling the opposite-spin and same-spin correlation energy components, using predetermined parameters, we reduce the mean absolute error to 9.5 kJ/mol. Further fine-tuning of these scaling parameters specifically for the X23 data set brings the mean absolute error down to 7.5 kJ/mol.

4.
J Chem Theory Comput ; 19(14): 4510-4519, 2023 Jul 25.
Article in English | MEDLINE | ID: mdl-36730728

ABSTRACT

Obtaining the atomistic structure and dynamics of disordered condensed-phase systems from first-principles remains one of the forefront challenges of chemical theory. Here we exploit recent advances in periodic electronic structure and provide a data-efficient approach to obtain machine-learned condensed-phase potential energy surfaces using AFQMC, CCSD, and CCSD(T) from a very small number (≤200) of energies by leveraging a transfer learning scheme starting from lower-tier electronic structure methods. We demonstrate the effectiveness of this approach for liquid water by performing both classical and path integral molecular dynamics simulations on these machine-learned potential energy surfaces. By doing this, we uncover the interplay of dynamical electron correlation and nuclear quantum effects across the entire liquid range of water while providing a general strategy for efficiently utilizing periodic correlated electronic structure methods to explore disordered condensed-phase systems.

5.
J Am Chem Soc ; 144(50): 23010-23018, 2022 Dec 21.
Article in English | MEDLINE | ID: mdl-36475637

ABSTRACT

Novel approaches to the functionalization of commodity polymers could provide avenues for the synthesis of materials for next-generation electronic devices. Herein, we present a catalytic method for the conversion of common unsaturated polymers such as polybutadiene, polyisoprene, and styrene-butadiene copolymers [e.g., polystyrene-block-polybutadiene-block-polystyrene and poly(styrene-stat-butadiene)] to poly(acetylene) (PA)-based multiblock copolymers with conjugation lengths of up to ∼20, making them potentially suitable for electronics applications. Additionally, we demonstrate the application of this method to the formal conversion of polyethylene─the most widely produced thermoplastic─into PA-containing multiblock materials.

6.
J Chem Phys ; 157(17): 174112, 2022 Nov 07.
Article in English | MEDLINE | ID: mdl-36347707

ABSTRACT

We study the performance of spin-component-scaled second-order Møller-Plesset perturbation theory (SCS-MP2) for the prediction of the lattice constant, bulk modulus, and cohesive energy of 12 simple, three-dimensional covalent and ionic semiconductors and insulators. We find that SCS-MP2 and the simpler scaled opposite-spin MP2 (SOS-MP2) yield predictions that are significantly improved over the already good performance of MP2. Specifically, when compared to experimental values with zero-point vibrational corrections, SCS-MP2 (SOS-MP2) yields mean absolute errors of 0.015 (0.017) Å for the lattice constant, 3.8 (3.7) GPa for the bulk modulus, and 0.06 (0.08) eV for the cohesive energy, which are smaller than those of leading density functionals by about a factor of two or more. We consider a reparameterization of the spin-scaling parameters and find that the optimal parameters for these solids are very similar to those already in common use in molecular quantum chemistry, suggesting good transferability and reliable future applications to surface chemistry on insulators.

7.
J Chem Theory Comput ; 18(9): 5374-5381, 2022 Sep 13.
Article in English | MEDLINE | ID: mdl-35969856

ABSTRACT

We present an algorithm and implementation of integral-direct, density-fitted Hartree-Fock (HF) and second-order Møller-Plesset perturbation theory (MP2) for periodic systems. The new code eliminates the formerly prohibitive storage requirements and allows us to study systems 1 order of magnitude larger than before at the periodic MP2 level. We demonstrate the significance of the development by studying the benzene crystal in both the thermodynamic limit and the complete basis set limit, for which we predict an MP2 cohesive energy of -72.8 kJ/mol, which is about 10-15 kJ/mol larger in magnitude than all previously reported MP2 calculations. Compared to the best theoretical estimate from literature, several modified MP2 models approach chemical accuracy in the predicted cohesive energy of the benzene crystal and hence may be promising cost-effective choices for future applications on molecular crystals.

8.
J Phys Chem Lett ; 13(32): 7497-7503, 2022 Aug 18.
Article in English | MEDLINE | ID: mdl-35939802

ABSTRACT

Metallic solids are an enormously important class of materials, but they are a challenging target for accurate wave function-based electronic structure theories and have not been studied in great detail by such methods. Here, we use coupled-cluster theory with single and double excitations (CCSD) to study the structure of solid lithium and aluminum using optimized Gaussian basis sets. We calculate the equilibrium lattice constant, bulk modulus, and cohesive energy and compare them to experimental values, finding accuracy comparable to common density functionals. Because the quantum chemical "gold standard" CCSD(T) (CCSD with perturbative triple excitations) is inapplicable to metals in the thermodynamic limit, we test two approximate improvements to CCSD, which are found to improve the results.

9.
J Phys Chem A ; 126(20): 3090-3100, 2022 May 26.
Article in English | MEDLINE | ID: mdl-35544770

ABSTRACT

Despite the long history of spectroscopic studies of the C2 molecule, fundamental questions about its chemical bonding are still being hotly debated. The complex electronic structure of C2 is a consequence of its dense manifold of near-degenerate, low-lying electronic states. A global multi-state diabatic model is proposed here to disentangle the numerous configuration interactions that occur within four symmetry manifolds of excited states of C2 (1Πg, 3Πg, 1Σu+ , and 3Σu+ ). The key concept of our model is the existence of two "valence-hole" configurations, 2σg22σu11πu33σg2 for 1,3Πg states and 2σg22σu11πu43σg1 for 1,3Σu+ states, that are derived from 3σg ← 2σu electron promotion. The lowest-energy state from each of the four C2 symmetry species is dominated by this type of valence-hole configuration at its equilibrium internuclear separation. As a result of their large binding energy (nominal bond order of 3) and correlation with the 2s22p2 + 2s2p3 separated-atom configurations, the presence of these valence-hole configurations has a profound impact on the global electronic structure and unimolecular dynamics of C2.

10.
J Chem Theory Comput ; 18(3): 1595-1606, 2022 Mar 08.
Article in English | MEDLINE | ID: mdl-35192359

ABSTRACT

The rapidly growing interest in simulating condensed-phase materials using quantum chemistry methods calls for a library of high-quality Gaussian basis sets suitable for periodic calculations. Unfortunately, most standard Gaussian basis sets commonly used in molecular simulation show significant linear dependencies when used in close-packed solids, leading to severe numerical issues that hamper the convergence to the complete basis set (CBS) limit, especially in correlated calculations. In this work, we revisit Dunning's strategy for construction of correlation-consistent basis sets and examine the relationship between accuracy and numerical stability in periodic settings. We find that limiting the number of primitive functions avoids the appearance of problematic small exponents while still providing smooth convergence to the CBS limit. As an example, we generate double-, triple-, and quadruple-ζ correlation-consistent Gaussian basis sets for periodic calculations with Goedecker-Teter-Hutter (GTH) pseudopotentials. Our basis sets cover the main-group elements from the first three rows of the periodic table. Especially for atoms on the left side of the periodic table, our basis sets are less diffuse than those used in molecular calculations. We verify the fast and reliable convergence to the CBS limit in both Hartree-Fock and post-Hartree-Fock (MP2) calculations, using a diverse test set of 19 semiconductors and insulators.

11.
J Chem Phys ; 155(12): 124106, 2021 Sep 28.
Article in English | MEDLINE | ID: mdl-34598553

ABSTRACT

We derive distance-dependent estimators for two-center and three-center electron repulsion integrals over a short-range Coulomb potential, erfc(ωr12)/r12. These estimators are much tighter than the ones based on the Schwarz inequality and can be viewed as a complement to the distance-dependent estimators for four-center short-range Coulomb integrals and for two-center and three-center full Coulomb integrals previously reported. Because the short-range Coulomb potential is commonly used in solid-state calculations, including those with the Heyd-Scuseria-Ernzerhof functional and with our recently introduced range-separated periodic Gaussian density fitting, we test our estimators on a diverse set of periodic systems using a wide range of the range-separation parameter ω. These tests demonstrate the robust tightness of our estimators, which are then used with integral screening to calculate periodic three-center short-range Coulomb integrals with linear scaling in system size.

12.
J Chem Theory Comput ; 17(6): 3335-3347, 2021 Jun 08.
Article in English | MEDLINE | ID: mdl-33957050

ABSTRACT

Fragment embedding has been widely used to circumvent the high computational scaling of using accurate electron correlation methods to describe the electronic ground states of molecules and materials. However, similar applications that utilize fragment embedding to treat electronic excited states are comparably less reported in the literature. The challenge here is twofold. First, most fragment embedding methods are most effective when the property of interest is local, but the change of the wave function upon excitation is nonlocal in general. Second, even for local excitations, an accurate estimate of, for example, the excitation energy can still be challenging owing to the need for a balanced treatment of both the ground and the excited states. In this work, we show that bootstrap embedding (BE), a fragment embedding method developed recently by our group, is promising toward describing general electronic excitations. Numerical simulations show that the excitation energies in full-valence active space (FVAS) can be well-estimated by BE to an error of ∼0.05 eV using relatively small fragments, for both local excitations and the excitations of some large dye molecules that exhibit strong charge-transfer characters. We hence anticipate BE to be a promising solution to accurately describing the excited states of large chemical systems.

13.
J Chem Phys ; 154(13): 131104, 2021 Apr 07.
Article in English | MEDLINE | ID: mdl-33832275

ABSTRACT

We present an efficient implementation of periodic Gaussian density fitting (GDF) using the Coulomb metric. The three-center integrals are divided into two parts by range-separating the Coulomb kernel, with the short-range part evaluated in real space and the long-range part in reciprocal space. With a few algorithmic optimizations, we show that this new method-which we call range-separated GDF (RSGDF)-scales sublinearly to linearly with the number of k-points for small to medium-sized k-point meshes that are commonly used in periodic calculations with electron correlation. Numerical results on a few three-dimensional solids show about ten-fold speedups over the previously developed GDF with little precision loss. The error introduced by RSGDF is about 10-5Eh in the converged Hartree-Fock energy with default auxiliary basis sets and can be systematically reduced by increasing the size of the auxiliary basis with little extra work.

14.
J Chem Phys ; 153(21): 214101, 2020 Dec 07.
Article in English | MEDLINE | ID: mdl-33291897

ABSTRACT

A suite of quantum embedding methods have recently been developed where the Schmidt decomposition is applied to the full system wavefunction to derive basis states that preserve the entanglement between the fragment and the bath. The quality of these methods can depend heavily on the quality of the initial full system wavefunction. Most of these methods, including bootstrap embedding (BE) [M. Welborn et al; J. Chem. Phys. 145, 074102 (2016)], start from a spin-restricted mean-field wavefunction [call this restricted BE (RBE)]. Given that spin-unrestricted wavefunctions can capture a significant amount of strong correlation at the mean-field level, we suspect that starting from a spin-unrestricted mean-field wavefunction will improve these embedding methods for strongly correlated systems. In this work, BE is generalized to an unrestricted Hartree-Fock bath [call this unrestricted BE (UBE)], and UBE is applied to model hydrogen ring systems. UBE's improved versatility over RBE is utilized to calculate high spin symmetry states that were previously unattainable with RBE. Ionization potentials, electron affinities, and spin-splittings are computed using UBE with accuracy on par with spin-unrestricted coupled cluster singles and doubles. Even for cases where RBE is viable, UBE converges more reliably. We discuss the limitations or weaknesses of each calculation and how improvements to RBE and density matrix embedding theory these past few years can also improve UBE.

15.
J Chem Theory Comput ; 16(8): 5035-5046, 2020 Aug 11.
Article in English | MEDLINE | ID: mdl-32589842

ABSTRACT

Recent developments in quantum embedding theories have provided attractive approaches to correlated calculations for large systems. In this work, we extend our previous work [J. Chem. Theory Comput. 2019, 15, 4497-4506; J. Phys. Chem. Lett. 2019, 10, 6368-6374] on bootstrap embedding (BE) to enable correlated ab initio calculations at the coupled cluster with singles and doubles (CCSD) level for large molecules. We introduce several new algorithmic developments that significantly reduce the computational cost of BE, while maintaining its accuracy. The resulting implementation scales as O(N3) for the integral transform and O(N) for the CCSD calculation. Numerical results on a series of conjugated molecules suggest that BE with reasonably sized fragments can recover more than 99.5% of the total correlation energy of a full CCSD calculation, while the required computational resources (time and storage) compare favorably to one popular local correlation scheme: domain localized pair natural orbital (DLPNO). The largest BE calculation in this work involves ∼2900 basis functions and can be performed on a single node with 16 CPU cores and 64 GB of memory in a few days. We anticipate that these developments represent an important step toward the application of BE to solve practical problems.

16.
Nat Commun ; 11(1): 2278, 2020 05 08.
Article in English | MEDLINE | ID: mdl-32385274

ABSTRACT

Carbon capture is essential for mitigating carbon dioxide emissions. Compared to conventional chemical scrubbing, electrochemically mediated carbon capture utilizing redox-active sorbents such as quinones is emerging as a more versatile and economical alternative. However, the practicality of such systems is hindered by the requirement of toxic, flammable organic electrolytes or often costly ionic liquids. Herein, we demonstrate that rationally designed aqueous electrolytes with high salt concentration can effectively resolve the incompatibility between aqueous environments and quinone electrochemistry for carbon capture, eliminating the safety, toxicity, and at least partially the cost concerns in previous studies. Salt-concentrated aqueous media also offer distinct advantages including extended electrochemical window, high carbon dioxide activity, significantly reduced evaporative loss and material dissolution, and importantly, greatly suppressed competing reactions including under simulated flue gas. Correspondingly, we achieve continuous carbon capture-release operations with outstanding capacity, stability, efficiency and electrokinetics, advancing electrochemical carbon separation further towards practical applications.

17.
Angew Chem Int Ed Engl ; 59(10): 3952-3955, 2020 Mar 02.
Article in English | MEDLINE | ID: mdl-31825136

ABSTRACT

We present the discovery of a novel radical cation formed through one-electron oxidation of an N-heterocyclic carbene-carbodiimide (NHC-CDI) zwitterionic adduct. This compound possesses a distonic electronic structure (spatially separate spin and charge regions) and displays persistence under ambient conditions. We demonstrate its application in a redox-flow battery exhibiting minimal voltage hysteresis, a flat voltage plateau, high Coulombic efficiency, and no performance decay for at least 100 cycles. The chemical tunability of NHCs and CDIs suggests that this approach could provide a general entry to redox-active NHC-CDI adducts and their persistent radical ions for various applications.

18.
Angew Chem Int Ed Engl ; 59(7): 2784-2792, 2020 Feb 10.
Article in English | MEDLINE | ID: mdl-31742840

ABSTRACT

Photoresponsive materials that change in response to light have been studied for a range of applications. These materials are often metastable during irradiation, returning to their pre-irradiated state after removal of the light source. Herein, we report a polymer gel comprising poly(ethylene glycol) star polymers linked by Cu24 L24 metal-organic cages/polyhedra (MOCs) with coumarin ligands. In the presence of UV light, a photosensitizer, and a hydrogen donor, this "polyMOC" material can be reversibly switched between CuII , CuI , and Cu0 . The instability of the MOC junctions in the CuI and Cu0 states leads to network disassembly, forming CuI /Cu0 solutions, respectively, that are stable until re-oxidation to CuII and supramolecular gelation. This reversible disassembly of the polyMOC network can occur in the presence of a fixed covalent second network generated in situ by copper-catalyzed azide-alkyne cycloaddition (CuAAC), providing interpenetrating supramolecular and covalent networks.

19.
J Phys Chem Lett ; 10(20): 6368-6374, 2019 Oct 17.
Article in English | MEDLINE | ID: mdl-31578867

ABSTRACT

Recent developments in quantum embedding have offered an attractive approach to describing electron correlation in molecules. However, previous methods such as density matrix embedding theory (DMET) require rigid partitioning of the system into fragments, which creates significant ambiguity for molecules. Bootstrap embedding (BE) is more flexible because it allows overlapping fragments, but when done on an orbital-by-orbital basis, BE introduces ambiguity in defining the connectivity of the orbitals. In this Letter, we present an atom-based fragment definition that significantly augments BE's performance in molecules. The resulting method, which we term atom-based BE, is very effective at recovering valence electron correlation in moderate-sized bases and delivers near-chemical-accuracy results using extrapolation. We anticipate atom-based BE may lead to a low-scaling and highly accurate approach to electron correlation in large molecules.

20.
J Chem Theory Comput ; 15(8): 4497-4506, 2019 Aug 13.
Article in English | MEDLINE | ID: mdl-31343878

ABSTRACT

Fragment embedding is one way to circumvent the high computational scaling of accurate electron correlation methods. The challenge of applying fragment embedding to molecular systems primarily lies in the strong entanglement and correlation that prevent accurate fragmentation across chemical bonds. Recently, Schmidt decomposition has been shown effective for embedding fragments that are strongly coupled to a bath in several model systems. In this work, we extend a recently developed quantum embedding scheme, bootstrap embedding (BE), to molecular systems. The resulting method utilizes the matching conditions naturally arising from using overlapping fragments to optimize the embedding. Numerical simulation suggests that the accuracy of the embedding improves rapidly with fragment size for small molecules, whereas larger fragments that include orbitals from different atoms may be needed for larger molecules. BE scales linearly with system size (apart from an integral transform) and hence can potentially be useful for large-scale calculations.

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