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1.
Article in English | MEDLINE | ID: mdl-26978786

ABSTRACT

The mid-IR spectrum of Oxazole (Oxa) is recorded. This spectrum is interpreted with the help of B3LYP/6-311++G(d,p) calculations and potential energy distribution (PED) analysis. The experimental spectrum is concordant with the theoretical data. Geometrical parameters and the atomic charges are also theoretically obtained and presented. Solvent effects on the geometrical parameters, vibrational frequencies, and electronic properties of Oxa are analyzed theoretically in chloroform, ethanol, and water. Besides, hydrogen bonded Oxa⋯(H2O)n (n=1, 2,…, 10) complexes are investigated within the PCM solvation model. It is found that the interaction energies in Oxa⋯(H2O)n complexes are influenced by the number of water molecules, and by the arrangement of water molecules.

2.
Spectrochim Acta A Mol Biomol Spectrosc ; 150: 614-22, 2015 Nov 05.
Article in English | MEDLINE | ID: mdl-26086997

ABSTRACT

In this study, FT-IR spectrum of 4-(imidazol-1-yl)phenol was recorded. Its vibrational frequencies and modes were determined. Vibrational assignments were proposed with the help of B3LYP/6-311++G(d,p) level of calculations. Three possible dimeric forms of the molecule were investigated theoretically. Besides, solvent effects on the structure, vibrational frequencies, and atomic charges were studied theoretically. Water, dimethyl sulfoxide, and ethanol were the solvents considered. Experimental FT-IR spectrum in DMSO solution was recorded and compared with solid phase experimental data. DFT B3LYP combined with polarized continuum model (PCM) was employed to characterize the solvent effects.

3.
Spectrochim Acta A Mol Biomol Spectrosc ; 137: 945-56, 2015 Feb 25.
Article in English | MEDLINE | ID: mdl-25282024

ABSTRACT

In this study where the interpretations of the experimental IR and Raman spectra recorded at room temperature for the ligands 5-nitroquinoline (5NQ) and 5-nitroisoquinoline (5NIQ) and also for their Zn(II) halide (halogen: chlorine, bromine, iodine) complexes were first reported, the assignments of the observed fundamental bands were achieved in the light of the vibrational spectral data and total energy distribution (TED) values calculated at B3LYP/6-311++G(d,p) and B3LYP/LANL2DZ levels of theory. The equilibrium geometrical parameters, Natural Bond Orbital (NBO) charges and frontier orbital (HOMO, LUMO) energies of these molecular structures were also calculated at the same level of theory. Comparisons over the corresponding experimental and theoretical data obtained for the title ligands and their complexes revealed that in complex form both ligands bond to Zn(II) ion through their ring nitrogen atoms and NO2 groups at the same time.


Subject(s)
Nitroquinolines/chemistry , Zinc/chemistry , Carbon/chemistry , Hydrogen/chemistry , Ligands , Models, Molecular , Molecular Conformation , Nitrogen/chemistry , Software , Spectrophotometry, Infrared , Spectrum Analysis, Raman , Vibration
4.
Spectrochim Acta A Mol Biomol Spectrosc ; 134: 267-75, 2015 Jan 05.
Article in English | MEDLINE | ID: mdl-25022498

ABSTRACT

In this study where the FTIR, Raman, (1)H NMR and (13)C NMR spectra of poly(N-vinylimidazole) which can be abbreviated as poly(NVIM) are first reported, a comparison of the experimental and theoretical vibrational spectral data of monomer NVIM and water-soluble poly(NVIM) has been given; such a comparison over the vibrational modes and associated spectral data calculated at B3LYP/6-31+G(d) level of theory for NVIM and its stable dimer forms provided significant contributions for getting a reliable interpretation of the observed vibrational spectra of poly(NVIM). The obtained results revealed that the change from NVIM to poly(NVIM) should be characterized by the disappearance of the CH2CH bonds of the vinyl group and the appearance of the aliphatic CH and CH2 bonds. Besides this, the thermal properties of poly(NVIM) were elucidated by thermogravimetric analyses such as TGA, DTA and DSC, while some electronic structure parameters of the most stable dimers of NVIM were investigated through the structure calculations performed by using B3LYP method and 6-31+G(d) basis set within the density functional theory (DFT) methodology.


Subject(s)
Imidazoles/chemistry , Polyvinyls/chemistry , Magnetic Resonance Spectroscopy/methods , Models, Chemical , Models, Molecular , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman , Thermogravimetry
5.
Spectrochim Acta A Mol Biomol Spectrosc ; 133: 683-96, 2014 Dec 10.
Article in English | MEDLINE | ID: mdl-24996210

ABSTRACT

FT-IR and FT-Raman spectra of 3-methyl-3h-imidazole-4-carbaldehyde (3M3HI4C) were recorded in the region 4000-400cm(-1) and 3500-50cm(-1), respectively. Optimized geometric parameters, conformational equilibria, normal mode frequencies, and corresponding vibrational assignments of 3M3HI4C were theoretically examined by quantum chemical methods for the first time. All vibrational frequencies were assigned in detail with the help of total energy distribution (TEDs). The experimental wavenumbers were compared with the scaled vibrational frequencies determined by DFT/B3LYP method. The results showed that the B3LYP/6-311++G(d,p) method predicts vibrational frequencies and the structural parameters effectively. The most stable conformer of the title compound was determined. The total electron density and molecular electrostatic potential surfaces of the molecule were constructed by using B3LYP/6-311++G(d,p) method to display electrostatic potential (electron+nuclei) distribution. The electronic properties HOMO and LUMO energies were measured. The lower energy band was assigned to the HOMO→LUMO transition. Natural bond orbital analysis of title molecule has been performed to indicate the presence of intramolecular charge transfer. Energies, relative stabilities, and dipole moments of title molecule were also compared and analyzed in the gas phase and in solvents. Furthermore, solvent effects on the geometry and vibrational frequency of 3M3HI4C were studied theoretically at the DFT/B3LYP level in combination with the conductor polarizable continuum model (C-PCM).


Subject(s)
Aldehydes/chemistry , Imidazoles/chemistry , Methylation , Models, Molecular , Quantum Theory , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman
6.
Spectrochim Acta A Mol Biomol Spectrosc ; 126: 339-48, 2014 May 21.
Article in English | MEDLINE | ID: mdl-24684869

ABSTRACT

Far-IR, mid-IR, and FT-Raman spectra of the chlorzoxazone (CZX) were recorded. The observed vibrational wavenumbers were analyzed and assigned to different normal modes of vibration of the molecule. Density functional calculations were performed to support wavenumber assignments of the observed bands. The equilibrium geometry and harmonic wavenumbers of CZX were calculated by the DFT B3LYP method. All tautomeric forms and dimer form of CZX were determined and optimized. Additionally, experimental FT-IR spectrum in ethanol solution was recorded and compared with solid phase experimental data for the first time. The combination of the DFT B3LYP with polarized continuum model (PCM) was employed to characterize the solvent effects in ethanol solution.


Subject(s)
Chlorzoxazone/chemistry , Muscle Relaxants, Central/chemistry , Isomerism , Models, Molecular , Molecular Conformation , Quantum Theory , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman
7.
Article in English | MEDLINE | ID: mdl-23099155

ABSTRACT

The mid-IR and Raman spectra of 3-hydroxy-2-quinoxalinecarboxylic acid (3HQC) were recorded. These spectra were interpreted with the help of B3LYP/6-311++G(d,p) calculations and potential energy distribution (PED) analysis. As a result of the calculations, seven tautomers were determined among many stable conformations. The experimental spectra were concordant with the theoretical data of two tautomers. In the functional group region overtone and combination bands were detected and assigned. In addition, because of several peaks in the IR spectrum, it was proposed that the 3HQC exhibits dimerization in condensed phase. Possible dimeric forms of 3HQC were evaluated at the same level of theory, and it has been seen that the calculation results confirm the above proposal. 1H and 13C NMR chemical shifts of 3HQC have been calculated, and compared with the experimental data. The frontier molecular orbital properties and the atomic charges were also theoretically obtained and presented.


Subject(s)
Quinoxalines/chemistry , Dimerization , Isomerism , Magnetic Resonance Spectroscopy , Models, Molecular , Quantum Theory , Spectroscopy, Fourier Transform Infrared
8.
Article in English | MEDLINE | ID: mdl-22265951

ABSTRACT

The Becke, three-parameter, Lee-Yang-Parr exchange-correlation functional have been used to study the geometry, relative energy, frequency and intensity of the vibrational bands of the 4-azabenzimidazole (4AB) tautomers and the most stable tautomer's homodimers. FT-IR and Raman spectra of the 4AB have been measured in the regions 4000-100 cm(-1) and 3500-100 cm(-1), respectively for the first time. The stability of 4AB tautomers were reported. All vibrational frequencies assigned in detail with the help of total energy distribution (TED) and isotopic shifts. The energy and atomic charges were discussed. NH⋯N type intermolecular hydrogen bonding interactions were suggested for 4AB dimeric forms. 1H and 13C NMR properties have been calculated for the most stable two tautomeric forms using the gauge independent atomic orbital (GIAO) method.


Subject(s)
Aza Compounds/chemistry , Benzimidazoles/chemistry , Isomerism , Models, Chemical , Quantum Theory , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman
9.
Spectrochim Acta A Mol Biomol Spectrosc ; 81(1): 684-9, 2011 Oct 15.
Article in English | MEDLINE | ID: mdl-21782494

ABSTRACT

We report synthesis of six new bis-nicotinamide metal(II) dihalide complexes [M(nia)(2)Cl(2); M = Mn, Co; nia:nicotinamide, M(nia)(2)Br(2); M = Mn, Hg; M(nia)(2)I(2); M = Cd, Cu], and their characterization by combining infrared spectroscopy with density functional theory (DFT) calculations. Infrared spectra indicate that ring-nitrogen is the active donor cite, and the atomic structure of the complexes is determined to be polymeric octahedral or distorted polymeric octahedral. Spin polarized electronic ground state is obtained for Mn, Co, and Cu halide complexes. The colors of the complexes also support the conclusion of octahedral coordination around the metal atoms, in agreement with DFT results.


Subject(s)
Halogens/chemistry , Metals/chemistry , Niacinamide/chemistry , Organometallic Compounds/chemistry , Organometallic Compounds/chemical synthesis , Chemistry, Analytic , Coordination Complexes/chemical synthesis , Coordination Complexes/chemistry , Models, Biological , Models, Molecular , Molecular Dynamics Simulation , Spectrum Analysis
10.
Spectrochim Acta A Mol Biomol Spectrosc ; 61(1-2): 37-43, 2005 Jan 01.
Article in English | MEDLINE | ID: mdl-15556418

ABSTRACT

The geometry, frequency and intensity of the vibrational bands of 8-hydroxyquinoline (8-HOQ) were obtained by HF and density functional theory (DFT) with BLYP and B3LYP functionals and 6-31G(d) as the basis set. The optimized bond lengths and bond angles are in good agreement with the X-ray data. The vibrational spectra of 8-HOQ which is calculated by the HF and DFT methods, reproduces the vibrational wavenumbers and intensities with an accuracy, which allows reliable vibrational assignments. Complexes of the type Hg(8-HOQ)X(2) [where X = Cl , Br] have been studied in the 4000-200 cm(-1) region, and assignment of all the observed bands were made. The analysis of the infrared spectra indicates that there are some structure-spectra correlations.


Subject(s)
Mercury/chemistry , Organomercury Compounds/chemistry , Oxyquinoline/chemistry , Models, Molecular , Molecular Structure , Spectrophotometry, Infrared , Vibration
11.
Spectrochim Acta A Mol Biomol Spectrosc ; 58(5): 933-9, 2002 Mar 15.
Article in English | MEDLINE | ID: mdl-11942399

ABSTRACT

The results of an infrared and Raman spectroscopic study are reported for seven new metal(II) pyrimidine tetracyanonickelate complexes, M(pyr)2Ni(CN)4 [where (pyr) = pyrimidine; M = Mn, Fe, Co, Zn, Ni, Cu or Cd] and an IR spectroscopic study is presented for new cadmium pyrimidine tetracyanometalate complex, Cd(pyr)2Cd(CN)4. The spectral data suggest that the first seven compounds belong to the Hofmann-type and the last compound belongs to the Hofmann-Td-type of complexes.


Subject(s)
Cyanides/chemistry , Organometallic Compounds/chemistry , Pyrimidines/chemistry , Spectrophotometry/methods , Biophysical Phenomena , Biophysics , Chemistry/methods , Models, Molecular
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