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1.
Arch Microbiol ; 199(5): 665-675, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28184965

ABSTRACT

Four bacterial strains from glyphosate- or alkylphosphonates-contaminated soils were tested for ability to utilize different organophosphonates. All studied strains readily utilized methylphosphonic acid and a number of other phosphonates, but differed in their ability to degrade glyphosate. Only strains Ochrobactrum anthropi GPK 3 and Achromobacter sp. Kg 16 utilized this compound after isolation from enrichment cultures with glyphosate. Achromobacter sp. MPK 7 from the same enrichment culture, similar to Achromobacter sp. MPS 12 from methylphosphonate-polluted source, required adaptation to growth on GP. Studied strains varied significantly in their growth parameters, efficiency of phosphonates degradation and characteristic products of this process, as well as in their energy metabolism. These differences give grounds to propose a possible model of interaction between these strains in microbial consortium in phosphonate-contaminated soils.


Subject(s)
Achromobacter/metabolism , Biodegradation, Environmental , Glycine/analogs & derivatives , Ochrobactrum anthropi/metabolism , Organophosphonates/metabolism , Soil Pollutants/metabolism , Glycine/metabolism , Microbial Consortia , Organophosphorus Compounds/metabolism , Soil/chemistry , Soil Microbiology , Glyphosate
2.
Appl Microbiol Biotechnol ; 100(2): 847-55, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26521241

ABSTRACT

The growth parameters of Achromobacter sp. Kg 16 (VKM B-2534 D), such as biomass and maximum specific growth rate, depended only on the source of phosphorus in the medium, but not on the carbon source or the presence of growth factors. With glyphosate as a sole phosphorus source, they were still 40-50 % lower than in media supplemented with orthophosphate or other organophosphonate-methylphosphonic acid. At the first time process of glyphosate acetylation and accumulation of acetylglyphosate in culture medium were revealed in this strain. Acetylglyphosate isolated from cultural liquid was identified by mass spectroscopy; its mass spectrum fully corresponded with that of chemically synthesized acetylglyphosate. Even poorer growth was observed in media with acetylglyphosate: although the strain was able to utilize this compound as a sole source of phosphorus, the maximum biomass was still 58-70 % lower than with glyphosate. The presence of acetylglyphosate in culture medium could also hinder the utilization of glyphosate as a phosphorus source. Therefore, the acetylation of glyphosate may be a specific feature of Achromobacter sp. Kg 16 responsible for its poor growth on this compound.


Subject(s)
Acetyltransferases/metabolism , Achromobacter/growth & development , Achromobacter/physiology , Glycine/analogs & derivatives , Phosphorus/metabolism , Soil Microbiology , Acetylation , Culture Media/chemistry , Drug Utilization , Glycine/metabolism , Organophosphorus Compounds , Glyphosate
3.
Bioresour Technol ; 193: 250-5, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26141285

ABSTRACT

The production of technical-grade sodium citrate from the glycerol-containing biodiesel waste by Yarrowia lipolytica was studied. Batch experiments showed that citrate was actively produced within 144 h, then citrate formation decreased presumably due to inhibition of enzymes involved in this process. In contrast, when the method of repeated batch cultivation was used, the formation of citrate continued for more than 500 h. In this case, the final concentration of citrate in the culture liquid reached 79-82 g/L. Trisodium citrate was isolated from the culture liquid filtrate by the addition of a small amount of NaOH, so that the pH of the filtrate increased to 7-8. This simple and economic isolation procedure gave the yield of crude preparation containing trisodium citrate 5.5-hydrate up to 82-86%.


Subject(s)
Biofuels/microbiology , Citrates/metabolism , Glycerol/metabolism , Yarrowia/physiology , Citric Acid/metabolism , Culture Media/metabolism , Sodium Citrate
4.
Appl Microbiol Biotechnol ; 93(2): 787-96, 2012 Jan.
Article in English | MEDLINE | ID: mdl-21789492

ABSTRACT

Bacterial strains capable of utilizing methylphosphonic acid (MP) or glyphosate (GP) as the sole sources of phosphorus were isolated from soils contaminated with these organophosphonates. The strains isolated from MP-contaminated soils grew on MP and failed to grow on GP. One group of the isolates from GP-contaminated soils grew only on MP, while the other one grew on MP and GP. Strains Achromobacter sp. MPS 12 (VKM B-2694), MP degraders group, and Ochrobactrum anthropi GPK 3 (VKM B-2554D), GP degraders group, demonstrated the best degradative capabilities towards MP and GP, respectively, and were studied for the distribution of their organophosphonate catabolism systems. In Achromobacter sp. MPS 12, degradation of MP was catalyzed by C-P lyase incapable of degrading GP (C-P lyase I). Adaptation to growth on GP yielded the strain Achromobacter sp. MPS 12A, which retained its ability to degrade MP via C-P lyase I and was capable of degrading GP with formation of sarcosine, thus suggesting the involvement of a GP-specific C-P lyase II. O. anthropi GPK 3 also degraded MP via C-P lyase I, but degradation of GP in it was initiated by glyphosate oxidoreductase, which was followed by product transformation via the phosphonatase pathway.


Subject(s)
Achromobacter/metabolism , Glycine/analogs & derivatives , Metabolic Networks and Pathways/genetics , Ochrobactrum anthropi/metabolism , Organophosphorus Compounds/metabolism , Soil Microbiology , Achromobacter/classification , Achromobacter/genetics , Achromobacter/isolation & purification , Biotransformation , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Glycine/metabolism , Ochrobactrum anthropi/classification , Ochrobactrum anthropi/genetics , Ochrobactrum anthropi/isolation & purification , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Glyphosate
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