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1.
Mol Genet Genomics ; 291(3): 1347-62, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26956010

ABSTRACT

Paracoccidioides brasiliensis is a thermodimorphic fungus associated with paracoccidioidomycosis (PCM), the most common systemic mycosis in Latin America. PCM treatment involves a long-term chemotherapeutic approach and relapses occur at an alarming frequency. Moreover, the emergence of strains with increased drug-resistance phenotypes puts constant pressure on the necessity to develop new alternatives to treat systemic mycoses. In this work, we show that the phenothiazine (PTZ) derivative thioridazine (TR) inhibits in vitro growth of P. brasiliensis yeasts at micromolar concentrations. We employed microarray hybridization to examine how TR affects gene expression in this fungus, identifying ~1800 genes that were modulated in response to this drug. Dataset evaluation showed that TR inhibits the expression of genes that control the onset of the cell wall integrity (CWI) response, hampering production of all major structural polysaccharides of the fungal cell wall (chitin, α-glucan and ß-glucan). Although TR and other PTZs have been shown to display antimicrobial activity by various mechanisms, inhibition of CWI signaling has not yet been reported for these drugs. Thus, TR may provide a novel approach to treat fungal infections by targeting cell wall biogenesis.


Subject(s)
Fungal Proteins/genetics , Gene Expression Profiling/methods , Oligonucleotide Array Sequence Analysis/methods , Paracoccidioides/drug effects , Thioridazine/pharmacology , Cell Wall/drug effects , Cell Wall/genetics , Fungal Polysaccharides/biosynthesis , Gene Expression Regulation, Fungal/drug effects , Humans , Microbial Sensitivity Tests , Paracoccidioides/genetics , Paracoccidioidomycosis/drug therapy , Signal Transduction/drug effects
2.
Microbiology (Reading) ; 161(Pt 5): 1018-1033, 2015 May.
Article in English | MEDLINE | ID: mdl-25737482

ABSTRACT

Strains of Xylella fastidiosa constitute a complex group of bacteria that develop within the xylem of many plant hosts, causing diseases of significant economic importance, such as Pierce's disease in North American grapevines and citrus variegated chlorosis in Brazil. X. fastidiosa has also been obtained from other host plants, in direct correlation with the development of diseases, as in the case of coffee leaf scorch (CLS)--a disease with potential to cause severe economic losses to the Brazilian coffee industry. This paper describes a thorough genomic characterization of coffee-infecting X. fastidiosa strains, initially performed through a microarray-based approach, which demonstrated that CLS strains could be subdivided in two phylogenetically distinct subgroups. Whole-genomic sequencing of two of these bacteria (one from each subgroup) allowed identification of ORFs and horizontally transferred elements (HTEs) that were specific to CLS-related X. fastidiosa strains. Such analyses confirmed the size and importance of HTEs as major mediators of chromosomal evolution amongst these bacteria, and allowed identification of differences in gene content, after comparisons were made with previously sequenced X. fastidiosa strains, isolated from alternative hosts. Although direct experimentation still needs to be performed to elucidate the biological consequences associated with such differences, it was interesting to verify that CLS-related bacteria display variations in genes that produce toxins, as well as surface-related factors (such as fimbrial adhesins and LPS) that have been shown to be involved with recognition of specific host factors in different pathogenic bacteria.


Subject(s)
Coffea/microbiology , Genome, Bacterial , Genomics , Xylella/genetics , Brazil , Chromosomes, Bacterial , Comparative Genomic Hybridization , Computational Biology , DNA Transposable Elements , Evolution, Molecular , Open Reading Frames , Phylogeny , Plant Diseases/microbiology , Xylella/classification , Xylella/isolation & purification
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