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1.
PeerJ Comput Sci ; 10: e2124, 2024.
Article in English | MEDLINE | ID: mdl-39145239

ABSTRACT

Pashtu is one of the most widely spoken languages in south-east Asia. Pashtu Numerics recognition poses challenges due to its cursive nature. Despite this, employing a machine learning-based optical character recognition (OCR) model can be an effective way to tackle this issue. The main aim of the study is to propose an optimized machine learning model which can efficiently identify Pashtu numerics from 0-9. The methodology includes data organizing into different directories each representing labels. After that, the data is preprocessed i.e., images are resized to 32 × 32 images, then they are normalized by dividing their pixel value by 255, and the data is reshaped for model input. The dataset was split in the ratio of 80:20. After this, optimized hyperparameters were selected for LSTM and CNN models with the help of trial-and-error technique. Models were evaluated by accuracy and loss graphs, classification report, and confusion matrix. The results indicate that the proposed LSTM model slightly outperforms the proposed CNN model with a macro-average of precision: 0.9877, recall: 0.9876, F1 score: 0.9876. Both models demonstrate remarkable performance in accurately recognizing Pashtu numerics, achieving an accuracy level of nearly 98%. Notably, the LSTM model exhibits a marginal advantage over the CNN model in this regard.

2.
Molecules ; 29(15)2024 Jul 24.
Article in English | MEDLINE | ID: mdl-39124865

ABSTRACT

Long non-coding RNAs (lncRNAs) are well known for their oncogenic or anti-oncogenic roles in cancer development. AGAP2-AS1, a new lncRNA, has been extensively demonstrated as an oncogenic lncRNA in various cancers. Abundant experimental results have proved the aberrantly high level of AGAP2-AS1 in a great number of malignancies, such as glioma, colorectal, lung, ovarian, prostate, breast, cholangiocarcinoma, bladder, colon and pancreatic cancers. Importantly, the biological functions of AGAP2-AS1 have been extensively demonstrated. It could promote the proliferation, migration and invasion of cancer cells. Simultaneously, the clinical significances of AGAP2-AS1 were also illustrated. AGAP2-AS1 was exceptionally overexpressed in various cancer tissues. Clinical studies disclosed that the abnormal overexpression of AGAP2-AS1 was tightly connected with overall survival (OS), lymph nodes metastasis (LNM), clinical stage, tumor infiltration, high histological grade (HG), serous subtype and PFI times. However, to date, the biological actions and clinical significances of AGAP2-AS1 have not been systematically reviewed in human cancers. In the present review, the authors overviewed the biological actions, potential mechanisms and clinical features of AGAP2-AS1 according to the previous studies. In summary, AGAP2-AS1, as a vital oncogenic gene, is a promising biomarker and potential target for carcinoma prognosis and therapy.


Subject(s)
Gene Expression Regulation, Neoplastic , Neoplasms , RNA, Long Noncoding , RNA, Long Noncoding/genetics , Humans , Neoplasms/genetics , Neoplasms/pathology , Neoplasms/metabolism , Biomarkers, Tumor/genetics , Prognosis , Cell Proliferation/genetics , Cell Movement/genetics
3.
Acta Psychol (Amst) ; 249: 104465, 2024 Aug 21.
Article in English | MEDLINE | ID: mdl-39173343

ABSTRACT

Teachers play a crucial role in guiding learners through life's challenges. They face educational and socio-economic shifts while striving to teach for a better future. Our study focuses on equipping future teachers, called pre-service teachers, with resilience-building resources during their teacher training program. A potential antecedent to resilience, which facilitates cognitive strategies and attentional processes, is cognitive flexibility. We first tested whether cognitive flexibility predicts resilience. Next, relying on the tenets of positive psychology, which studies resilience, we developed and tested the effectiveness of character strengths intervention in enhancing pre-service teachers' resilience and cognitive flexibility. An individual's belief in their ability to change personal resources could influence how an intervention manifests. Hence, we studied how mindset impacts the intervention's effect on cognitive flexibility and, thus, resilience. We adopted a multi-method approach, guided by Polk's theory of resilience, to test out objectives. Using a cross-sectional design, study one (n = 273) found that cognitive flexibility significantly predicted resilience. Study two (N = 193; nexp = 133, ncont = 60) was a multi-site field experiment. We found that intervention significantly enhanced resilience (experimental group M = 29.62, control group M = 28.33) and cognitive flexibility (experimental group M = 54.42, control group M = 52.01). Further, a growth mindset, was found to moderate the indirect effect of character strengths intervention on resilience via cognitive flexibility. The study contributes to theoretical and practical advancements in resilience. Taken together, the findings highlight the cognitive-affective-behavioural makeup of resilience and, importantly, the role of cognitive flexibility. The intervention can be seamlessly integrated into teacher training curricula for a resilient future.

4.
Angew Chem Int Ed Engl ; : e202411180, 2024 Aug 27.
Article in English | MEDLINE | ID: mdl-39192703

ABSTRACT

This work reports synthesis of a germylene based donor-acceptor molecule and its thermal excitation to a triplet state by coordination with a Lewis acid. Products have been characterized by single crystal X-ray diffraction, EPR spectroscopy, and SQUID measurement, in conjunction with DFT calculation. The singlet-triplet energy gap of the donor-acceptor molecule is dramatically reduced from -18.8 to -7.2 kcal/mol by the coordination with B(C6F5)3 (BCF), which enables an intramolecular single electron transfer from one germylene moiety to another upon heating, forming an intramolecular radical ion pair with diradical character. The work provides an approach to the formation of thermally populated open-shell species of heavier main group elements.

5.
Eur J Neurosci ; 2024 Aug 20.
Article in English | MEDLINE | ID: mdl-39161987

ABSTRACT

Readers of Chinese characters need to recognize how they are formed in order to identify them correctly. However, our understanding of the cognitive processing of characters in working memory is limited. In Experiment 1, using the character N-back task paradigm, electrophysiological data were recorded from 26 participants to investigate the effects of the visual feature of radicals on neural activity during the character recognition, updating and maintenance in the N-back task. Results showed that compound characters required longer response times than single-component characters. For the event-related potentials (ERPs), the compound character condition had more negative N2pc and lower P300 amplitudes than the single-component character condition. In Experiment 2, data from 26 participants were used to analyse the effect of the phonological feature of radicals on neural activity during the character recognition, updating and maintenance in the N-back task. Results showed that there was a larger P200 in the irregular character condition than in the regular character condition, but there was no difference between the regular and the irregular characters in the N2pc, P300 and slow wave (SW) components. The visual feature and the phonological feature of the radicals may have different effects on the character processing. This study reveals the neural effects of Chinese character radicals on cognitive processing in a working memory task and provides behavioural and electrophysiological evidence for a theoretical model of verbal working memory subprocesses.

6.
Front Psychol ; 15: 1448827, 2024.
Article in English | MEDLINE | ID: mdl-39144605

ABSTRACT

Introduction: This study aims to investigate whether exercise adherence and positive mental character significantly affect subjective well-being among Chinese college students during the COVID-19 pandemic and whether positive mental character plays a mediating role. Methods: The study employed questionnaires, including the Exercise Adherence Scale, the Positive Mental Character Scale, and the Subjective Well-Being Scale, which were administered to students across seven universities in Henan Province, China. A total of 1,001 participants were analyzed in the final sample. Data were analyzed using SPSS 21.0 for descriptive statistics, independent samples T-test, correlation, and regression analyses. Furthermore, structural equation model with AMOS was conducted to examine the potential mediating effect of positive mental characteristics on the relationship between exercise adherence and subjective well-being. Results: The results indicated significant differences in exercise adherence, positive mental character, and subjective well-being between male and female participants, with males scoring higher in all three domains. Among Chinese university students during the COVID-19 pandemic, there was a significant correlation among exercise adherence, positive mental character, and subjective well-being. Exercise adherence was found to have a significant and positive impact on both positive mental character and subjective well-being. Additionally, it was found that positive mental character had a significant positive association with subjective well-being. The mediating role of positive mental character in the relationship between exercise adherence and subjective well-being was partially supported. Discussion: Exercise adherence among Chinese college students had a significant positive association on both positive mental character and subjective well-being throughout the COVID-19 pandemic. The exercise adherence can directly or indirectly enhance subjective well-being through its association with positive mental character. Therefore, positive mental and subjective well-being can be enhanced by consistent physical activity even during a pandemic.

8.
Psychon Bull Rev ; 2024 Jul 19.
Article in English | MEDLINE | ID: mdl-39028393

ABSTRACT

There is an ongoing debate between the sensory enhancement account and the attentional prioritization account concerning the mechanism underlying object-based attention. This debate remains unresolved because of the predominant use of geometric objects in previous studies, which made it difficult to experimentally dissociate the two accounts due to the prominent boundaries of these objects. The current study investigated the mechanism underlying semantic object-based attention by utilizing Chinese two-character words with different word frequencies and the event-related potentials (ERPs) technique to elucidate the ongoing debate. The behavioral results showed that the semantic object effect was observed only in the high-frequency condition. The ERP results revealed the following: (1) the N1 component was larger for the high-frequency condition compared with the low-frequency condition. However, there was no significant difference in amplitude between the N1 component elicited by invalid same object locations and invalid different object locations, irrespective of whether it occurred in high- or low-frequency conditions. (2) The P3 component elicited by invalid same object locations was larger than that elicited by invalid different object locations only in the high-frequency condition. (3) The N400 amplitude elicited by invalid same object locations was smaller than that elicited by invalid different object locations only in the high-frequency condition. These results suggest that in the absence of obvious object boundaries, the production of object-based attention is primarily driven by search strategies. Attentional prioritization, rather than sensory enhancement, is the dominant mechanism underlying object-based attention.

9.
J Res Adolesc ; 2024 Jul 19.
Article in English | MEDLINE | ID: mdl-39032006

ABSTRACT

This paper explores the decline in adolescent mental health and the weakening of traditional moral frameworks, positing education in the virtues as protective of mental health due to the intrinsic link between moral/existential wellbeing and psychological health. By integrating character education into school curricula, a continuous "dosage" of moral guidance may be an optimal way to ensure a gradual and ever-clearer articulation of a life worth living and how to live well. The paper critiques popular clinical and positive psychological approaches to promoting wellbeing, which often miss the existential and moral dimensions of adolescent growth. The conclusion emphasizes the need for integrating moral education into mental health interventions to address the comprehensive existential and moral dimensions of adolescent development. This paper advocates for a proactive character developmental model that nurtures moral and existential growth, recognizing challenges with virtue and meta-virtue development as integral to personal and moral evolution, and enhancing the moral and psychological fortitude of adolescents.

10.
J Affect Disord ; 363: 662-670, 2024 Oct 15.
Article in English | MEDLINE | ID: mdl-39019224

ABSTRACT

BACKGROUND: Social Anxiety Disorder (SAD) is a highly heterogeneous disorder. To enlighten its heterogeneity, this study focused on recalled parental behavior and aimed to empirically identify if there are subgroups of SAD based on recalled parental behavior by means of cluster analysis. Further, the study investigated whether those subgroups differed on clinical, trauma, and personality variables. METHODS: This study included 505 individuals diagnosed with SAD and 98 adult controls who were asked to fill out the Parental Bonding Instrument (PBI), the Adverse Childhood Experiences Questionnaire (ACE), and the Temperament and Character Inventory (TCI). Cluster analysis determined whether there are meaningful SAD subgroups based on PBI. The clusters obtained were compared with each other and with the control group with regard to clinical, ACE, and TCI variables. RESULTS: The cluster analysis revealed two SAD clusters based on recalled parental behavior. SAD individuals in the first cluster (49.3 %) perceived their parents as intermediately caring, but not as overcontrolling. SAD individuals in the second cluster (50.7 %) perceived their parents as less caring and overcontrolling, reported more severe clinical symptoms and trauma, and had lower values in Self-Directedness and Cooperativeness. LIMITATIONS: The present study is cross-sectional, therefore unable to confirm causal interpretations. CONCLUSION: Parenting is meaningful to enlighten the heterogeneity of SAD symptomatology and to specify treatment approaches as there are two meaningful subgroups in individuals with SAD corresponding to differences in clinical presentation, trauma, and personality.


Subject(s)
Parent-Child Relations , Parenting , Phobia, Social , Humans , Female , Male , Adult , Cluster Analysis , Phobia, Social/psychology , Parenting/psychology , Cross-Sectional Studies , Object Attachment , Surveys and Questionnaires , Temperament , Adverse Childhood Experiences/statistics & numerical data , Adverse Childhood Experiences/psychology , Personality Inventory , Parents/psychology , Young Adult , Middle Aged
11.
Mol Phylogenet Evol ; 199: 108138, 2024 Oct.
Article in English | MEDLINE | ID: mdl-38977041

ABSTRACT

Cypripedioideae (slipper orchids; Orchidaceae) currently consist of âˆ¼200 herbaceous species with a strikingly disjunctive distribution in tropical and temperate regions of both hemispheres. In this study, an updated phylogeny with representatives from all five cypripedioid genera was presented based on maximum likelihood and Bayesian inference of plastome and low-copy nuclear genes. Phylogenomic analyses indicated that each genus is monophyletic, but some relationships (e.g., those among Cypripedium sects. Acaulia, Arietinum, Bifolia, Flabellinervia, Obtusipetala and Palangshanensia) conflict with those in previous studies based on Sanger data. Cypripedioideae appeared to have arisen in South America and/or the adjacent Qinghai-Tibet Plateau and Hengduan Mountains âˆ¼35 Mya. We inferred multiple dispersal events between East Asia and North America in Cypripedium, and between mainland Southeast Asia and the Malay Archipelago in Paphiopedilum. In the Americas, divergences among four genera (except Cypripedium) occurred around 31-20 Mya, long before the closure of the Isthmus of Panama, indicating the importance of long-distance dispersal. Evolutionary patterns between morphological and plastome character evolution suggested several traits, genome size and NDH genes, which are likely to have contributed to the success of slipper orchids in alpine floras and low-elevation forests. Species diversification rates were notably higher in epiphytic clades of Paphiopedilum than in other, terrestrial cypripedioids, paralleling similar accelerations associated with epiphytism in other groups. This study also suggested that sea-level fluctuations and mountain-building processes promoted the diversification of the largest genera, Paphiopedilum and Cypripedium.


Subject(s)
Orchidaceae , Phylogeny , Phylogeography , Orchidaceae/genetics , Orchidaceae/classification , Bayes Theorem , Evolution, Molecular , Genetic Speciation , Biological Evolution , Sequence Analysis, DNA
12.
Mol Phylogenet Evol ; 199: 108147, 2024 Oct.
Article in English | MEDLINE | ID: mdl-38986755

ABSTRACT

Parasitengona (velvet mites, chiggers and water mites) is a highly diverse and globally distributed mite lineage encompassing over 11,000 described species, inhabiting terrestrial, freshwater and marine habitats. Certain species, such as chiggers (Trombiculidae), have a great medical and veterinary importance as they feed on their vertebrate hosts and vector pathogens. Despite extensive previous research, the classification of Parasitengona is still contentious, particularly regarding the boundaries between superfamilies and families, exacerbated by the absence of a comprehensive phylogeny. The ontogeny of most Parasitengona is distinct by the presence of striking metamorphosis, with parasitic larvae being heteromorphic compared to the predatory free-living deutonymphs and adults. The enigmatic superfamily Allotanaupodoidea is an exception, with larvae and active post-larval stages being morphologically similar, suggesting that the absence of metamorphosis may be either an ancestral state or a secondary reversal. Furthermore, there is disagreement in the literature on whether Parasitengona had freshwater or terrestrial origin. Here, we inferred phylogenetic relationships of Parasitengona (89 species, 36 families) and 307 outgroups using five genes (7,838 nt aligned). This phylogeny suggests a terrestrial origin of Parasitengona and a secondary loss of metamorphosis in Allotanaoupodoidea. We recovered the superfamily Trombidioidea (Trombidioidea sensu lato) as a large, well-supported, higher-level clade including 10 sampled families. We propose a new classification for the terrestrial Parasitengona with three new major divisions (epifamilies) of the superfamily Trombidioidea: Trombelloidae (families Audyanidae, Trombellidae, Neotrombidiidae, Johnstonianidae, Chyzeriidae); Trombidioidae (Microtrombidiidae, Neothrombiidae, Achaemenothrombiidae, Trombidiidae, Podothrombiidae); and Trombiculoidae (=Trombiculidae sensu lato). Adding them to previously recognized superfamilies Allotanaupodoidea, Amphotrombioidea, Calyptostomatoidea, Erythraeoidea, Tanaupodoidae and Yurebilloidae.


Subject(s)
Metamorphosis, Biological , Phylogeny , Animals , Metamorphosis, Biological/genetics , Ecosystem , Biological Evolution , Larva/growth & development , Larva/classification , Larva/genetics , Mites/classification , Mites/genetics , Mites/anatomy & histology , Mites/growth & development , Sequence Analysis, DNA
13.
Acta Psychol (Amst) ; 248: 104334, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38964044

ABSTRACT

This study purports to investigate the effects of cue and instructor demonstration on Chinese as a second language (CSL) beginners' Chinese character learning performance, cognitive load, learning motivation and attitude. In the current research, 100 CSL beginners were randomly assigned to four experimental groups, i.e., instructor demonstration cued character, instructor demonstration non-cued character, non-instructor demonstration cued character and non-instructor demonstration non-cued character. Participants were instructed to watch an instructional video and subsequently complete a post-test and a questionnaire. The results show that (1) in the presence of instructor demonstration, the cued characters can noticeably reduce CSL beginners' cognitive load and enhance their learning attitudes towards character learning, enabling them to achieve better performance in character stroke but not in radical and structure, and (2) in the presence of cued characters, the instructor demonstration can noticeably reduce CSL beginners' cognitive load and increase their learning motivation and attitudes towards character learning but can not improve their character learning performance. The findings have significant implications for educators and instructional designers of Chinese and other non-alphabetic languages, such as Kanji and Hangul.


Subject(s)
Cues , Learning , Multilingualism , Humans , Male , Female , Learning/physiology , Motivation/physiology , Young Adult , Language , China , Adult , Cognition/physiology
14.
Forensic Sci Int ; 361: 112127, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38964051

ABSTRACT

The chemical recovery of a defaced serial number is a common forensic science practice, however it is not understood how proficient experts perform in correctly identifying recovered serial numbers. Understanding the accuracy of experts and how they compare to novices in character recognition can help to establish a baseline for this expertise. In this study an expert-novice comparison assessment was completed involving 118 test plates, each stamped with six randomised alphanumeric characters. The plates were defaced and chemically recovered before being viewed by multiple participants over six time intervals. A total of 3169 character inspections were completed. An assessment of confidence and error rates were calculated for both expert (trained) and novice (untrained) participants. Errors were counted when a participant interpreted a different character to that of the ground truth and believed the result was accurate for reporting. The results showed a similar (2.3 % and 2.4 %) error rate for the cohorts, however a statistical difference in confidence levels was recorded, demonstrating the more conservative nature of experts. This study aims to assist in validating practitioner interpretations, through addressing some forensic science criticisms, such as establishing error rates to routine scientific practices.


Subject(s)
Forensic Sciences , Humans , New Zealand , Australia , Reproducibility of Results , Professional Competence
15.
ISME J ; 2024 Jul 29.
Article in English | MEDLINE | ID: mdl-39073917

ABSTRACT

Acidimicrobiia are widely distributed in nature and suggested to be autotrophic via the Calvin-Benson-Bassham (CBB) cycle. However, direct evidence of chemolithoautotrophy in Acidimicrobiia is lacking. Here, we report a chemolithoautotrophic enrichment from a saline lake, and the subsequent isolation and characterization of a chemolithoautotroph, Salinilacustristhrix flava EGI L10123T, which belongs to a new Acidimicrobiia family. Although strain EGI L10123T is autotrophic, neither its genome nor Acidimicrobiia metagenome-assembled genomes (MAGs) from the enrichment culture encode genes necessary for the CBB cycle. Instead, genomic, transcriptomic, enzymatic, and stable-isotope probing data hinted at the activity of the reversed oxidative TCA (roTCA) coupled with the oxidation of sulfide as the electron donor. Phylogenetic analysis and ancestral character reconstructions of Acidimicrobiia suggested that the essential CBB gene rbcL was acquired through multiple horizontal gene transfer events from diverse microbial taxa. In contrast, genes responsible for sulfide- or hydrogen-dependent roTCA carbon fixation were already present in the last common ancestor of extant Acidimicrobiia. These findings imply the possibility of roTCA carbon fixation in Acidimicrobiia and the ecological importance of Acidimicrobiia. Further research in the future is necessary to confirm whether these characteristics are truly widespread across the clade.

16.
Ecol Lett ; 27(8): e14489, 2024 Aug.
Article in English | MEDLINE | ID: mdl-39075934

ABSTRACT

Rarely do we observe competitive exclusion within plant communities, even though plants compete for a limited pool of resources. Thus, our understanding of the mechanisms sustaining plant biodiversity might be limited. In this study, we explore two common ecological strategies, species sorting and character displacement, that promote coexistence by reducing competition. We assess the degree to which woody plants may implement these two strategies to lower belowground competition for nutrients which occurs via nutritional (mostly mycorrhizal) mutualisms. First, we compile data on plant traits and the mycorrhizal association state of woody angiosperms using a global inventory of indigenous flora. Our analysis reveals that species in locations with high mycorrhizal diversity exhibit distinct mean values in leaf area and wood density based on their mycorrhizal type, indicating species sorting. Second, we reanalyse a large dataset on leaf area to demonstrate that in areas with high mycorrhizal diversity, trees maintain divergent leaf area values, showcasing character displacement. Character displacement among plants is considered rare, making our observation significant. In summary, our study uncovers a rare occurrence of character displacement and identifies a common mechanism employed by plants to alleviate competition, shedding light on the complexities of plant coexistence in diverse ecosystems.


Subject(s)
Biodiversity , Mycorrhizae , Mycorrhizae/physiology , Magnoliopsida/physiology , Magnoliopsida/microbiology , Symbiosis , Plant Leaves/physiology , Ecosystem , Trees/physiology , Trees/microbiology , Wood
17.
Food Chem X ; 23: 101586, 2024 Oct 30.
Article in English | MEDLINE | ID: mdl-39036481

ABSTRACT

Yuanbaoshancha (YBSC) is characterized as a new wild tea relative morphologically and phytochemically distinguished from the closest wild tea plants Rongjiangcha (Camellia yungkiangensis, RJC) and Tulecha (Camellia costata, TLC). YBSC young leaves contain higher tea polyphenol and theobromine contents but lower caffeine and theanine as compared with RJC, TLC, and other tea landraces and modern cultivars. The major alkaloid detected in YBSC, TLC, and RJC is theobromine while caffeine is a minor; the primary catechins in YBSC leaves are non-galloylated catechins, significantly different from Camellia sinensis and other low-caffeine tea resources. The unique phytochemical profiles featured YBSC black tea with extremely lower caffeine and higher theobromine, as well as unique flavors and health benefits. This botanical characterization of YBSC and two related low-caffeine wild tea resources lays a foundation for future better utilization for the production of a highly valuable natural low-caffeine/high-theobromine tea. Chemical compounds: Caffeine (PubChem CID: 2519); Theobromine (PubChem CID: 5429); Catechins (PubChem CID: 9064); Epigallocatechin gallate (PubChem CID: 65064); Theanine (PubChem CID: 439378); Jasmone (PubChem CID: 1549018); cis-3-Hexenyl hexanoate (PubChem CID: 5352543); Hexyl 2-methylbutanoate (PubChem CID: 24838).

18.
Behav Sci (Basel) ; 14(7)2024 Jun 22.
Article in English | MEDLINE | ID: mdl-39062345

ABSTRACT

Anime has become a global phenomenon due to its diverse cultural representations, relatable characters, and unique storytelling. However, there is limited research on the relationship between character personality and popularity. The aim of this study is to understand the relevance of the characters' personalities to the audience's evaluation of various characters. This study analyzed the correlation between the MBTI personality evaluations of characters in anime and their popularity, based on the data of the personality of each animation character reviewed by audiences. In this study, 885 characters from 200 anime aimed at a male audience were selected as a sample for research. The results showed that personality traits such as introversion, intuition, and thinking had an impact on the popularity of female characters but not male characters. The overall results were influenced by the larger sample size of female characters. By addressing this question, the study can contribute to the design of a character's personality and overall success in anime.

19.
Syst Biol ; 2024 Jul 04.
Article in English | MEDLINE | ID: mdl-38963801

ABSTRACT

Phylogenetic trees establish a historical context for the study of organismal form and function. Most phylogenetic trees are estimated using a model of evolution. For molecular data, modeling evolution is often based on biochemical observations about changes between character states. For example, there are four nucleotides, and we can make assumptions about the probability of transitions between them. By contrast, for morphological characters, we may not know a priori how many characters states there are per character, as both extant sampling and the fossil record may be highly incomplete, which leads to an observer bias. For a given character, the state space may be larger than what has been observed in the sample of taxa collected by the researcher. In this case, how many evolutionary rates are needed to even describe transitions between morphological character states may not be clear, potentially leading to model misspecification. To explore the impact of this model misspecification, we simulated character data with varying numbers of character states per character. We then used the data to estimate phylogenetic trees using models of evolution with the correct number of character states and an incorrect number of character states. The results of this study indicate that this observer bias may lead to phylogenetic error, particularly in the branch lengths of trees. If the state space is wrongly assumed to be too large, then we underestimate the branch lengths, and the opposite occurs when the state space is wrongly assumed to be too small.

20.
Front Psychol ; 15: 1352272, 2024.
Article in English | MEDLINE | ID: mdl-38993348

ABSTRACT

Despite recent criticism, the search for neural correlates of consciousness (NCCs) is still at the core of a contemporary neuroscience of consciousness. One common aim is to distinguish merely statistical correlates from "NCCs proper", i.e., NCCs that are uniquely associated with a conscious experience and lend themselves to a metaphysical interpretation. We should then distinguish between NCCs as data and NCCs as hypotheses, where the first is just recorded data while the second goes beyond any set of recorded data. Still, such NCC-hypotheses ought to be testable. Here, I present a framework for so-called "sufficiency tests." We can distinguish four different classes of such tests, depending on whether they predict creature consciousness (which systems are conscious), state consciousness (when a system is conscious), phenomenal content (what a system is conscious of), or phenomenal character (how a system experiences). For each kind of test, I provide examples from the empirical literature. I also argue that tests for phenomenal character (How-Tests) are preferable because they bracket problematic aspects of the other kinds of tests. However, How-Tests imply a metaphysical tie between the neural and phenomenal domain that is stronger than supervenience, delivers explanations but does not close the explanatory gap, uses first-person methods to test hypotheses, and thereby relies on a form of direct neurophenomenal structuralism.

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