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1.
Antioxid Redox Signal ; 28(4): 296-310, 2018 02 01.
Article in English | MEDLINE | ID: mdl-28899103

ABSTRACT

AIMS: Living cells employ thioredoxin and glutaredoxin disulfide oxido-reductases to protect thiol groups in intracellular proteins. FrnE protein of Deinococcus radiodurans (drFrnE) is a disulfide oxido-reductase that is induced in response to Cd2+ exposure and is involved in cadmium and radiation tolerance. The aim of this study is to probe structure, function, and cellular localization of FrnE class of proteins. RESULTS: Here, we show drFrnE as a novel cytoplasmic oxido-reductase that could be functional in eubacteria under conditions where thioredoxin/glutaredoxin systems are inhibited or absent. Crystal structure analysis of drFrnE reveals thioredoxin fold with an alpha helical insertion domain and a unique, flexible, and functionally important C-terminal tail. The C-tail harbors a novel 239-CX4C-244 motif that interacts with the active site 22-CXXC-25 motif. Crystal structures with different active site redox states, including mixed disulfide (Cys22-Cys244), are reported here. The biochemical data show that 239-CX4C-244 motif channels electrons to the active site cysteines. drFrnE is more stable in the oxidized form, compared with the reduced form, supporting its role as a disulfide reductase. Using bioinformatics analysis and fluorescence microscopy, we show cytoplasmic localization of drFrnE. We have found "true" orthologs of drFrnE in several eubacterial phyla and, interestingly, all these groups apparently lack a functional glutaredoxin system. Innovation and Conclusion: We show that drFrnE represents a new class of hitherto unknown intracellular oxido-reductases that are abundantly present in eubacteria. Unlike other well-known oxido-reductases, FrnE harbors an additional dithiol motif that acts as a conduit to channel electrons to the active site during catalytic turnover. Antioxid. Redox Signal. 28, 296-310.


Subject(s)
Cytoplasm/enzymology , Deinococcus/chemistry , Protein Disulfide Reductase (Glutathione)/chemistry , Amino Acid Motifs/genetics , Catalytic Domain , Crystallography, X-Ray , Cytoplasm/chemistry , Deinococcus/enzymology , Glutaredoxins/chemistry , Glutaredoxins/genetics , Glutaredoxins/metabolism , Oxidation-Reduction , Oxidative Stress , Protein Disulfide Reductase (Glutathione)/genetics , Protein Disulfide Reductase (Glutathione)/metabolism , Thioredoxins/chemistry , Thioredoxins/genetics , Thioredoxins/metabolism
2.
Acta Crystallogr F Struct Biol Commun ; 70(Pt 11): 1540-2, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25372826

ABSTRACT

In prokaryotes, Dsb proteins catalyze the formation of native disulfide bonds through an oxidative folding pathway and are part of the cell machinery that protects proteins from oxidative stress. Deinococcus radiodurans is an extremophile which shows unparalleled resistance to ionizing radiation and oxidative stress. It has a strong mechanism to protect its proteome from oxidative damage. The genome of Deinococcus shows the presence of FrnE, a Dsb protein homologue that potentially provides the bacterium with oxidative stress tolerance. Here, crystallization and preliminary X-ray crystallographic analysis of FrnE from D. radiodurans are reported. Diffraction-quality single crystals were obtained using the hanging-drop vapour-diffusion method with reservoir solution consisting of 100 mM sodium acetate pH 5.0, 10% PEG 8000, 15-20% glycerol. Diffraction data were collected on an Agilent SuperNova system using a microfocus sealed-tube X-ray source. The crystal diffracted to 1.8 Šresolution at 100 K. The space group of the crystal was found to be P21221, with unit-cell parameters a=47.91, b=62.94, c=86.75 Å, α=ß=γ=90°. Based on Matthews coefficient analysis, one monomer per asymmetric unit is present in the crystal, with a solvent content of approximately 45%.


Subject(s)
Bacterial Proteins/chemistry , Deinococcus/enzymology , Oxidoreductases/chemistry , Bacterial Proteins/isolation & purification , Crystallization , Crystallography, X-Ray , Disulfides/chemistry , Disulfides/isolation & purification , Oxidoreductases/isolation & purification
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