Naming the menagerie: creativity, culture and consequences in the formation of scientific names.

The coining of scientific names for newly described species is one of the most creative acts in science. We briefly review the history of species naming, with an emphasis on constraints and freedoms in the choice of new names and how they came to be. We then consider patterns in etymologies and linguistic origins of scientific names across clades and through time. Use of 'non-classical' languages (those other than Latin and Greek) in naming species has increased, as has the use of eponymous names (despite recent controversy around the practice). Finally, we consider ways in which creativity in naming has consequences for the conduct and outcome of scientific work. For example, sale of naming rights has funded research and conservation, while naming species after celebrities has increased media attention to the science of species discovery. Other consequences of naming are more surprising, including a strong effect of species-name etymology on the kinds of scientific studies conducted for plant-feeding arthropods. Scientific naming is a clear example of how science and scientists are socially situated, and how culturally influenced decisions such as what to name a new species can affect both public perception of science and the conduct of science itself.

Implications for conservation assessment from flux in the botanical record over 20 years in southwest Ghana.

At best, conservation decisions can only be made using the data available at the time. For plants and especially in the tropics, natural history collections remain the best available baseline information upon which to base conservation assessments, in spite of well-documented limitations in their taxonomic, geographic, and temporal coverage. We explore the extent to which changes to the plant biological record over 20 years have changed our conception of the conservation importance of 931 plant taxa, and 114 vegetation samples, recorded in forest reserves of the southwest Ghana biodiversity hotspot. 36% of species-level assessments changed as a result of new distribution data. 12% of species accepted in 2016 had no assessment in 1996: of those, 20% are new species publications, 60% are new records for SW Ghana, and 20% are taxonomic resolutions. Apparent species ranges have increased over time as new records are made, but new species publications are overwhelmingly of globally rare species, keeping the balance of perceived rarity in the flora constant over 20 years. Thus, in spite of considerable flux at the species record level, range size rarity scores calculated for 114 vegetation samples of the reserves in 1996 and 2016 are highly correlated with each other: r(112) = 0.84, p < .0005, and showed no difference in mean score over 20 years: paired t(113) = -0.482, p = .631. This consistency in results at the area level allows for worthwhile conservation priority setting over time, and we argue is the better course of action than taking no action at all.

Update on Accepted Novel Bacterial Isolates Derived from Human Clinical Specimens and Taxonomic Revisions Published in 2020 and 2021.

A number of factors, including microbiome analyses and the increased utilization of whole-genome sequencing in the clinical microbiology laboratory, has contributed to the explosion of novel prokaryotic species discovery, as well as bacterial taxonomy revision. This review attempts to summarize such changes relative to human clinical specimens that occurred in 2020 and 2021, per primary publication in the International Journal of Systematic and Evolutionary Microbiology or acceptance on Validation Lists published by the International Journal of Systematic and Evolutionary Microbiology. Of particular significance among valid and effectively published taxa within the past 2 years were novel Corynebacterium spp., coagulase-positive staphylococci, Pandoraea spp., and members of family Yersiniaceae. Noteworthy taxonomic revisions include those within the Bacillus and Lactobacillus genera, family Staphylococcaceae (including unifications of subspecies designations to species level taxa), Elizabethkingia spp., and former members of Clostridium spp. and Bacteroides spp. Revisions within the Brucella genus have the potential to cause deleterious effects unless the relevance of such changes is properly communicated by microbiologists to stakeholders in clinical practice, infection prevention, and public health.

Discovering marine biodiversity in the 21st century.

We review the current knowledge of the biodiversity of the ocean as well as the levels of decline and threat for species and habitats. The lack of understanding of the distribution of life in the ocean is identified as a significant barrier to restoring its biodiversity and health. We explore why the science of taxonomy has failed to deliver knowledge of what species are present in the ocean, how they are distributed and how they are responding to global and regional to local anthropogenic pressures. This failure prevents nations from meeting their international commitments to conserve marine biodiversity with the results that investment in taxonomy has declined in many countries. We explore a range of new technologies and approaches for discovery of marine species and their detection and monitoring. These include: imaging methods, molecular approaches, active and passive acoustics, the use of interconnected databases and citizen science. Whilst no one method is suitable for discovering or detecting all groups of organisms many are complementary and have been combined to give a more complete picture of biodiversity in marine ecosystems. We conclude that integrated approaches represent the best way forwards for accelerating species discovery, description and biodiversity assessment. Examples of integrated taxonomic approaches are identified from terrestrial ecosystems. Such integrated taxonomic approaches require the adoption of cybertaxonomy approaches and will be boosted by new autonomous sampling platforms and development of machine-speed exchange of digital information between databases.

50 Years of Cumulative Open-Source Data Confirm Stable and Robust Biodiversity Distribution Patterns for Macrofungi.

Fungi are a hyper-diverse kingdom that contributes significantly to the regulation of the global carbon and nutrient cycle. However, our understanding of the distribution of fungal diversity is often hindered by a lack of data, especially on a large spatial scale. Open biodiversity data may provide a solution, but concerns about the potential spatial and temporal bias in species occurrence data arising from different observers and sampling protocols challenge their utility. The theory of species accumulation curves predicts that the cumulative number of species reaches an asymptote when the sampling effort is sufficiently large. Thus, we hypothesize that open biodiversity data could be used to reveal large-scale macrofungal diversity patterns if these datasets are accumulated long enough. Here, we tested our hypothesis with 50 years of macrofungal occurrence records in Norway and Sweden that were downloaded from the Global Biodiversity Information Facility (GBIF). We first grouped the data into five temporal subsamples with different cumulative sampling efforts (i.e., accumulation of data for 10, 20, 30, 40 and 50 years). We then predicted the macrofungal diversity and distribution at each subsample using the maximum entropy (MaxEnt) species distribution model. The results revealed that the cumulative number of macrofungal species stabilized into distinct distribution patterns with localized hotspots of predicted macrofungal diversity with sampling efforts greater than approximately 30 years. Our research demonstrates the utility and importance of the long-term accumulated open biodiversity data in studying macrofungal diversity and distribution at the national level.

A revision of the North American genus Proctorus (Coleoptera, Curculionidae, Ellescini) with descriptions of two new species.

The rarely collected North American endemic genus Proctorus (Coleoptera, Curculionidae, Ellescini) has hitherto contained two described species, P.armatus LeConte, 1876 and P.decipiens (LeConte, 1876). Here, Proctorus is revised and two new species, namely P.emarginatus sp. nov. and P.truncatus sp. nov., are described. Lectotypes for P.armatus and P.decipiens are designated from known syntypes. All four species in the genus are associated with Salicaceae, but, in addition to differences in external and genital morphology, there is also evidence of differing host plant usage between the species. A photographic key to the four species is provided to facilitate identification.

Mapping the hidden diversity of the Geophagus sensu stricto species group (Cichlidae: Geophagini) from the Amazon basin.

South American freshwater ichthyofauna is taxonomically the most diverse on the planet, yet its diversity is still vastly underestimated. The Amazon basin alone holds more than half of this diversity. The evidence of this underestimation comes from the backlog of morphologically distinct, yet undescribed forms deposited in museum collections, and from DNA-based inventories which consistently identify large numbers of divergent lineages within even well-studied species groups. In the present study, we investigated lineage diversity within the Geophagus sensu stricto species group. To achieve these objectives, we analyzed 337 individuals sampled from 77 locations within and outside the Amazon basin representing 10 nominal and six morphologically distinct but undescribed species. We sequenced the mitochondrial cytochrome c oxidase subunit I (COI) and delimited lineages using four different single-locus species discovery methods (mPTP-15 lineages; LocMin-14 lineages; bGMYC-18 lineages; and GMYC-30 lineages). The six morphologically distinct but undescribed species were also delimited by the majority of the species discovery methods. Five of these lineages are restricted to a single collection site or a watershed and their habitats are threatened by human activities such as deforestation, agricultural activities and construction of hydroelectric plants. Our results also highlight the importance of combining DNA and morphological data in biodiversity assessment studies especially in taxonomically diverse tropical biotas.

Mangroves are an overlooked hotspot of insect diversity despite low plant diversity.

BACKGROUND: The world's fast disappearing mangrove forests have low plant diversity and are often assumed to also have a species-poor insect fauna. We here compare the tropical arthropod fauna across a freshwater swamp and six different forest types (rain-, swamp, dry-coastal, urban, freshwater swamp, mangroves) based on 140,000 barcoded specimens belonging to ca. 8500 species. RESULTS: We find that the globally imperiled habitat "mangroves" is an overlooked hotspot for insect diversity. Our study reveals a species-rich mangrove insect fauna (>3000 species in Singapore alone) that is distinct (>50% of species are mangrove-specific) and has high species turnover across Southeast and East Asia. For most habitats, plant diversity is a good predictor of insect diversity, but mangroves are an exception and compensate for a comparatively low number of phytophagous and fungivorous insect species by supporting an unusually rich community of predators whose larvae feed in the productive mudflats. For the remaining tropical habitats, the insect communities have diversity patterns that are largely congruent across guilds. CONCLUSIONS: The discovery of such a sizeable and distinct insect fauna in a globally threatened habitat underlines how little is known about global insect biodiversity. We here show how such knowledge gaps can be closed quickly with new cost-effective NGS barcoding techniques.

Conotrachelus terryerwini, a majestic new species of Curculionidae (Molytinae, Conotrachelini) from Costa Rica.

A very large, new, and distinctive species of Conotrachelus Dejean is described from Área de Conservación Guanacaste, Costa Rica. Conotrachelus terryerwini sp. nov. (type locality Volcan Orosi, Estación Biológica Maritza, Guanacaste, Costa Rica) is described and named in honor of Terry L. Erwin (1940-2020), famed carabidologist and biodiversity champion. This majestic species is easily distinguished by its large body size (15-20 mm) and extremely long rostrum (especially in females).

Dolichos kongkandae sp. nov. and lectotypification of D. fragrans (Leguminosae, Papilionoideae) from Asia.

Dolichos kongkandae is described as a new species from Asia and includes a line drawing, photographs and information on its distribution and ecology. The morphological differences between D. kongkandae and the morphologically similar D. tenuicaulis are highlighted and clarified. Additionally, a lectotype for D. fragrans is designated.

Taxonomic revision of emGuapinannus/em Wygodzinsky, 1951 (Hemiptera: Schizopteridae), with description of 19 new species.

Guapinannus Wygodzinsky, 1951 (Hemiptera: Schizopteridae) was described based on a single female specimen from Costa Rica. Some additional specimens representing this genus have since become available and were incorporated into a comparative male genitalic study across Dipsocoromorpha and into combined molecular and morphological hypotheses of the infraorder. However, the species-level diversity of Guapinannus has remained unexplored and undocumented. Based on examination of 264 specimens from central and South America, we here revise the taxonomy of Guapinannus, describing 19 species as new (Guapinannus anaticulus, sp. n.; Guapinannus artus, sp. n.; Guapinannus auriculus, sp. n.; Guapinannus castigatus, sp. n.; Guapinannus clava, sp. n.; Guapinannus dispar, sp. n.; Guapinannus falcis, sp. n.; Guapinannus graziae, sp. n.; Guapinannus minutus, sp. n.; Guapinannus orbiculatus, sp. n.; Guapinannus plurilobus, sp. n.; Guapinannus policis, sp. n.; Guapinannus robustus, sp. n.; Guapinannus sinuosus, sp. n.; Guapinannus tatumbia, sp. n.; Guapinannus tenuis, sp. n.; Guapinannus tergus, sp. n.; Guapinannus trilobus, sp. n.; Guapinannus uncus, sp. n.). In addition, we provide photos of the female holotype of Guapinannus bierigi Wygodzinsky, 1951, SEM documentation for Guapinannus clava, sp. n., habitus photos and a map for all species, and line drawings of male genitalic features for all species for which males are known.

Description of three new species of the genus Mata Distant, 1906 (Hemiptera: Cicadidae: Cicadinae: Oncotympanini) with notes on their natural history from Indian state of Meghalaya, India.

Three new species of the Asian genus Mata Distant, 1906 (Hemiptera: Cicadidae) viz. Mata lenonia sp.nov.; Mata ruffordii sp.nov. and Mata meghalayana sp.nov. are described from Indian state of Meghalaya. Keys and taxonomic descriptions of these species are provided with detailed accounts of their natural history and acoustics.

Two new Cotasteromimina from Borneo (Coleoptera, Curculionidae: Molytinae).

Based on material collected by canopy fogging in forests on Borneo, Obhylius arboricola gen. nov., sp. nov., and Seticotasteromimus brunomanseri sp. nov., the second species of this genus, are described. Further records of the type species of Seticotasteromimus Germann, 2013, S. jarawa Germann, 2013, are presented from Borneo, some 2700 km distant from the type locality on the Andaman Islands. Along with Seticotasteromimus, the new genus is best placed in the subtribe Cotasteromimina.

Pygidiapion De Sousa amp; Mermudes, a new genus of Apioninae (Brentidae: Apioninae: Apionini) associated with Fabaceae from Brazil, with the description of a new species and transfer of Apion zikani Heller, 1922.

The genus Pygidiapion De Sousa Mermudes gen. n., described and illustrated here, includes two species from Brazil: the type-species Pygidiapion zeppelinii De Sousa Mermudes sp. n. (type-locality: João Pessoa, Paraiba state), which develops in flower buds of Pterocarpus violaceus Vogel (Fabaceae); and Pygidiapion zikani (Heller, 1922) comb. n. (from Apion) (type-locality: Passa Quatro, Minas Gerais state), which develops in flower buds of Dalbergia foliolosa Benth. (Fabaceae). Pygidiapion is defined by the following set of characters: rostrum of males with two elongate longitudinal and punctate latero-ventral sulci; hind wings with small radial window; hypomeral lobes divided by median suture and sternellum distinctly exposed; meso- and metatibiae mucronate; pygidium of the apionine incomplete type; and tegminal plate fused with basal piece. Pygidiapion zeppelinii is diagnosed by: meso- and metatibiae mucronate; pygidium distinctly modified, with deep transverse dorsal sulcus, medially deeper and rounded, and proximal marginal rim angulate (apical flange), corresponding to the distal margin, which is emarginate; tegminal plate fused to basal piece, apical portion of parameroid lobes weakly notched medially, each side of suprafenestral plate with five macrochaetae, fenestral width 1.25 times length, separated by about 3.2 times fenestral width, linea arquata visible, prostegium protruding medially, tegminal apodeme 0.76 as long as basal piece, with apex narrow and rounded. Pygidiapion zikani is distinguished from P. zeppelinii by smaller size; head, rostrum and antennae brownish; scutellum subquadrate; and by association with Dalbergia spp. (Fabaceae). Association principally with the papilionoid group of Fabaceae suggest allocation of the new taxon to the subtribe Oxystomatina.

One Century of Study: What We Learned about Paracoccidioides and How This Pathogen Contributed to Advances in Antifungal Therapy.

Paracoccidioidomycosis (PCM) is a notable fungal infection restricted to Latin America. Since the first description of the disease by Lutz up to the present day, Brazilian researchers have contributed to the understanding of the life cycle of this pathogen and provided the possibility of new targets for antifungal therapy based on the structural and functional genomics of Paracoccidioides. In this context, in silico approaches have selected molecules that act on specific targets, such as the thioredoxin system, with promising antifungal activity against Paracoccidioides. Some of these are already in advanced development stages. In addition, the application of nanostructured systems has addressed issues related to the high toxicity of conventional PCM therapy. Thus, the contribution of molecular biology and biotechnology to the advances achieved is unquestionable. However, it is still necessary to transcend the boundaries of synthetic chemistry, pharmaco-technics, and pharmacodynamics, aiming to turn promising molecules into newly available drugs for the treatment of fungal diseases.

Resolving the Taxonomic Status of Potential Biocontrol Agents Belonging to the Neglected Genus Lipolexis Förster (Hymenoptera, Braconidae, Aphidiinae) with Descriptions of Six New Species.

Lipolexis is a small genus in the subfamily Aphidiinae represented by one species in Europe (Lipolexis gracilis Förster) and by four in Asia (Lipolexis wuyiensis Chen, L. oregmae Gahan, L. myzakkaiae Pramanik and Raychaudhuri and L. pseudoscutellaris Pramanik and Raychaudhuri). Although L. oregmae is employed in biological control programs against pest aphids, the last morphological study on the genus was completed over 50 years ago. This study employs an integrative approach (morphology and molecular analysis (COI barcode region)), to examine Lipolexis specimens that were sampled worldwide, including specimens from BOLD database. These results establish that two currently recognized species of Lipolexis (L. gracilis, L. oregmae) are actually a species complex and also reveal phylogenetic relationships within the genus. Six new species are described and a global key for the identification of Lipolexis species is provided.

Revision of the Pantomorus albosignatus species group (Coleoptera: Curculionidae: Entiminae) from Mexico and Central America.

Pantomorus albosignatus Boheman, 1840 (Entiminae: Naupactini), type species of the genus Pantomorus Schoenherr, 1840, is broadly distributed in Mexico, from Oaxaca and Veracruz to Chihuahua and Coahuila, and is probably related to P. parvulus Sharp 1891 (México: Oaxaca and Veracruz), P. andersoni sp. nov. (México: Guerrero), and P. crinitus (Boheman, 1840) (southern Mexico, El Salvador and Guatemala). The four species are small (5-8 mm), apterous, usually show a characteristic maculation and erect setae on the elytra, short antennae, vestigial to absent humeri, and well-developed, squamose corbels of the metatibiae, and are here referred to as the Pantomorus albosignatus species group. Our study was based on the examination of type material and about 500 specimens from different collections, and provides a dichotomous key, descriptions or redescriptions of the species, habitus photographs, line drawings of female and male genitalia, a map of distribution, new locality records and new plant associations. We propose that Pantomorus nobilis (Boheman 1840) is a new junior subjective synonym of P. crinitus (Boheman, 1840), and we designate lectotypes for the species Pantomorus albosignatus Boheman, P. parvulus Sharp, P. crinitus (Boheman), P. nobilis (Boheman) and P. affinis Sharp, 1891 (the latter is also a junior synonym of P. crinitus). Pantomorus albosignatus usually inhabits Acacia grasslands and cactus deserts of the Mexican Plateau, at higher elevations than remaining species; P. parvulus occurs in cloud forests and tropical deciduous forests of southern Mexico; P. crinitus in open oak pine forests, cloud forests and tropical deciduous forests of southern Mexico, Guatemala and El Salvador; and P. andersoni is endemic to the state of Guerrero, in Acacia-cactus woodlands.

Revision of the Nepalese genus Microplinthus Zherichin, 1987 (Coleoptera: Curculionidae: Molytinae), with description of 25 new species.

The Nepalese genus Microplinthus Zherichin, 1987 is revised. The following 25 new species are described (type locality in parentheses): M. annapurnae (Annapurna Himal, Rambrong Danda, 28°23'N 84°13'E), M. arunensis (Khandbari Distr., forest S. Mansimgma, 27°30'N 87°20'E), M. brevipennis (Manaslu Himal, Bhara Pokhari, 28°18'N 84°28'E), M. durga (W Pokhara, near Ghorepani, 28°24'N 83°42'E), M. franzi (Kaligandakhi valley, between Lethe and Tukuche, 28°36'N 83°38'E), M. ganesha (Ganesh Himal, Rupchet, 28°05'N 85°09'E), M. godawaricus (Kathmandu, Phulchowki, 27°34'N 85°24'E), M. gupta (Helambu Himal, upper Chipling, 27°53'N 85°28'E), M. helambuensis (Central Nepal, between Mulkharka and Thare Pati, 28°08'N 85°22'E-28°02'N 85°29'E), M. jaegeri (W Pokhara, Mt. Panchase, 28°13'N 83°48'E), M. karnalicus (Karnali Distr. 5 km E Charta, 29°18'N 82°20'E), M. kaskianus (Kaski Distr., above Pothana, 28°19'N 83°51'E), M. kaumarya (Karnali Distr., Gotichaur valley, 29°12'10"N 82°18'56"E), M. khandbariensis (Khandbari Distr., above Seduwa, 27°34'N 87°15'E), M. koshianus (Koshi Prov., SW Chichilla, 27°27.01'N 87°13.13'E), M. letheensis (Kaligandakhi valley, between Lethe and Tukuche, 28°36'N 83°38'E), M. longipennis (Manaslu Himal, Bhara Pokhari lekh, 28°18'24"N 84°28'06"E), M. messneri (Panchtar Distr., Dhorpar Kharka, 27°05'N 87°55'E), M. newarorum (Phulchowki Distr., Lalitpur, 27°34'N 85°24'E), M. phulchowkianus (Kathmandu, Phulchowki, 27°34'N 85°24'E), M. rugosus (Solokhumbu Distr., Lamiura Danda, 27°34'N 86° 30'E), M. schmidti (Manaslu Himal, Dudh Pokhari lekh, 28°20'N 84°35'E), M. sherpa (Khandbari Distr., Bakan, 27°38'N 87°12'E), M. tamanus (Rolwaling Himal, upper Simigau, 27°51'N 86°15'E), M. yeti (Hinku Distr., Drangka Khola bridge, 27°35'N 86°47'E). A key for the identification of all species of Microplinthus is given. A phylogenetic analysis based on morphological characters of the species referable to the genera Falsanchonus, Microniphades and Microplinthus was carried out, implementing Bayesian Inference and Maximum Parsimony. Results indicate that the genera Falsanchonus and Microniphades are paraphyletic and are here treated as junior synonyms of Microplinthus.

Four new Tapinomorphus Hartmann species from Angola, Zambia and Zimbabwe (Coleoptera: Curculionidae: Entiminae: Sciaphilini).

Four new Tapinomorphus species are described and illustrated: Tapinomorphus angolanus sp. nov. from Angola, T. kudrnai sp. nov. from Zambia, T. latipennis sp. nov. and T. verunkae sp. nov. from Zimbabwe. This brings the total number of species in the genus to 20. Habitus images and illustrations of important characters are provided.