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1.
Mar Environ Res ; 193: 106286, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38109802

ABSTRACT

Microplastics (MPs) and fouling organisms are prevalent in oceans worldwide. The study aims to investigate the pollution characteristics of MPs in fouling organisms. The study found significant inter-specific differences in the MPs abundance, while the length of MPs is consistent. The average number of MPs in N. exigua is 0.00 ± 0.00. There is a correlation between MPs abundance and weight in sessile group, while gastropods don't. Direct observation has demonstrated that the radulae of N. radula can envelop MPs. Fiber and blue are the predominant forms and colors of MPs found in fouling organisms. It is noteworthy that all film and fragment MPs observed were of a blue hue and had a size limitation of 500 µm. The characteristics of MPs between sessile organisms are more similar than those between gastropods. This study has improved our understanding of the pollution characteristics of MPs in fouling organisms, specifically gastropods.


Subject(s)
Microplastics , Water Pollutants, Chemical , Plastics , Bays , Water Pollutants, Chemical/analysis , Environmental Monitoring , Aquaculture , China
2.
Vet Sci ; 10(7)2023 Jul 21.
Article in English | MEDLINE | ID: mdl-37505883

ABSTRACT

Antimicrobial resistance (AMR) is an emerging global concern, with the widespread use of antimicrobials in One Health contributing significantly to this phenomenon. Among various antimicrobials, tetracyclines are extensively used in the beef cattle industry, potentially contributing to the development of resistance in bacterial populations. This meta-analysis aimed to examine the association between tetracycline use in beef cattle and the development of tetracycline resistance in Escherichia coli isolates. A comprehensive search was conducted using multiple databases to gather relevant observational studies evaluating tetracycline use and tetracycline resistance in Escherichia coli isolates from beef cattle. The rate of tetracycline resistance from each study served as the effect measure and was pooled using a random-effects model, considering possible disparities among studies. The meta-analysis of 14 prospective longitudinal studies resulted in a 0.31 prevalence of tetracycline resistance in Escherichia coli in non-intervention (no exposure), contrasting numerically elevated resistance rates in the intervention (exposed) groups of 0.53 and 0.39 in those receiving tetracyclines via feed or systemically, respectively. Despite the observed numerical differences, no statistically significant differences existed between intervention and non-intervention groups, challenging the conventional belief that antimicrobial use in livestock inherently leads to increased AMR. The findings of this study underscore the need for additional research to fully understand the complex relationship between antimicrobial use and AMR development. A considerable degree of heterogeneity across studies, potentially driven by variations in study design and diverse presentation of results, indicates the intricate and complex nature of AMR development. Further research with standardized methodologies might help elucidate the relationship between tetracycline use and resistance in Escherichia coli isolated from beef cattle.

3.
Br J Biomed Sci ; 80: 11098, 2023.
Article in English | MEDLINE | ID: mdl-37020476

ABSTRACT

Environmental contamination is estimated to contribute to up to 20% of all hospital acquired infections. Acinetobacter baumannii is an example of one the most prevalent opportunistic pathogens causing severe and persistent infections in immunocompromised patients. It has proven ability to form biofilms, has significant associated multi-drug resistance and is able to transfer mobile genetic elements to other clinically relevant pathogens. All of these factors point to a definite utility of A. baumannii as an indicator organism for effectiveness of decontamination regimens as well as environmental screening. There is an increased cost, both financial and clinical, associated with multi drug resistant organisms, carbapenem resistant A. baumannii. With a dearth of new antimicrobials in development, now is the time to radically transform and lead the introduction of scientifically based environmental screening and microbiological verified decontamination to control the dissemination of further resistance.


Subject(s)
Acinetobacter Infections , Acinetobacter baumannii , Cross Infection , Humans , Acinetobacter Infections/microbiology , Acinetobacter Infections/prevention & control , Carbapenems/pharmacology , Acinetobacter baumannii/genetics , Hospitals , Cross Infection/microbiology , Anti-Bacterial Agents/pharmacology , Drug Resistance, Multiple, Bacterial/genetics , Microbial Sensitivity Tests
4.
Article in English | MEDLINE | ID: mdl-37047990

ABSTRACT

Legacy stores of faecal pollution in streambed sediments can result in delayed impacts on environmental quality and human health if resuspended into the overlying water column. Different catchment sources of faecal pollution can contribute to a legacy store of microbial pollutants, with size of stores influenced by microbial die-off and faecal accrual rates in the streambed. The aim of this study was to use a mesocosm experiment to characterise the persistence of E. coli derived from faeces of dairy cows, deer, and geese once introduced to streambed sediment under different temperature regimes. The settling rate of solid constituents of faecal material into streambed sediment once delivered into an aquatic environment was also quantified. The persistence patterns of E. coli in streambed sediment were found to vary as a function of faecal source and temperature; die-off of E. coli in sediment contaminated with goose faeces was more rapid than in sediments contaminated with dairy cow or deer faeces. Goose faeces also recorded a more rapid settling rate of faecal particles through the water column relative to dairy cow and deer faeces, suggesting a more efficient delivery of E. coli to streambed sediments associated with this faecal source. Our findings provide new evidence to improve understanding of the potential longer-term risks to both the environment and public health posed by sediments when contaminated with livestock, wildlife, and wildfowl faeces.


Subject(s)
Deer , Escherichia coli , Humans , Female , Cattle , Animals , Geese , Feces , Water , Geologic Sediments , Environmental Monitoring
5.
Food Microbiol ; 108: 104092, 2022 Dec.
Article in English | MEDLINE | ID: mdl-36088123

ABSTRACT

Escherichia coli shows the potential of indicating foodborne pathogens. The purpose of this study is to investigate the association between E. coli and foodborne pathogens such as Campylobacter, Salmonella, and Listeria in pastured poultry farms, as well as in related processing facilities. Five different sample types: (i) feces, (ii) soil, (iii) whole carcass rinse during processing (WCR-P), (iv) whole carcass rinse of final product after chilling and storage (WCR-F), and (v) ceca were measured for E. coli populations. A logistic regression model for pathogen presence was developed for each sample type. The E. coli population significantly increased the predicted probability of Salmonella presence for soil and WCR-P samples (p = 0.0011 and p = 0.0157 respectively). For Campylobacter, the initial prevalence in feces and ceca were high and a decreasing trend of detecting Campylobacter was observed as E. coli concentration increased. In soil and WCR-P models, the probability of the presence of Campylobacter significantly increased as E. coli population increased. These models provide a practical and effective way of evaluating the relationship between E. coli and foodborne pathogens and enable prediction of foodborne pathogen presence based on E. coli prevalence within the pastured poultry farm-to-fork continuum.


Subject(s)
Campylobacter , Poultry , Animals , Chickens , Escherichia coli , Farms , Salmonella , Soil
6.
J Food Prot ; 85(5): 844-848, 2022 05 01.
Article in English | MEDLINE | ID: mdl-35294006

ABSTRACT

ABSTRACT: This study aimed to monitor microbial contamination levels in a variety of health functional foods and to establish new microbial criteria. Indicator organisms (i.e., aerobic bacteria, coliform bacteria, and Escherichia coli) were monitored in 10 health functional food categories (743 items, 3,715 samples). The mean total aerobic counts of ginseng and Korean red ginseng were -0.35 and -0.74 log CFU/g; and the mean total coliform counts were -1.4 and -1.39 log CFU/g, respectively. In addition, the mean total coliform counts of fiber and protein products were -1.34 and -1.22 log CFU/g, respectively. However, no aerobic or coliform cells were detected in any other health functional food products (vitamins, minerals, probiotics, milk thistle extract, propolis, eicosapentaenoic acid, docosahexaenoic acid, or lutein products), and no E. coli was detected in any of the categories. These results can potentially be used to update the microbial criteria of the Health Functional Food Code.


Subject(s)
Bacteria , Functional Food , Bacteria, Aerobic , Colony Count, Microbial , Escherichia coli , Hygiene
7.
Front Microbiol ; 12: 754894, 2021.
Article in English | MEDLINE | ID: mdl-34803978

ABSTRACT

In pigs, antimicrobial use (AMU) practices vary at different production phases between herds and between countries. Antimicrobial resistance (AMR) development is linked to AMU but recognized as a multi-factorial issue, and thus, any information increasing knowledge of AMU and AMR relationships is valuable. We described AMU and screened the carriage of different AMR phenotypes of indicator Escherichia coli in 25 selected Finnish piglet-producing and finishing herds that formed nine birth-to-slaughter production lines. Moreover, we studied associations between AMU and AMR in both herd types and throughout the production line. Treatment records were obtained from the national Sikava register for 1year, and AMU was quantified as mg/PCU (population correction unit) and TIs (treatment incidences). For phenotypic antimicrobial susceptibility testing, ten pen-level pooled feces samples (n=250) in each herd were collected from one room representing the oldest weaned piglets or the oldest finishing pigs. Majority of the medications (96.8%) was administered parenterally, and penicillin was the predominant antimicrobial in every herd. More different antimicrobial substances were used in piglet-producing than in finishing herds (median 5 and 1, respectively, p<0.001). As mg/PCU, sows had the highest AMU and suckling piglets had the highest TIs, whereas finishing pigs were the least treated age group. The proportion of susceptible indicator E. coli isolates of all studied isolates was 59.6%. Resistance was found most commonly against tetracycline, sulfamethoxazole, trimethoprim, and ampicillin, and multi-resistant (MR) isolates (46.5% of all resistant isolates) were resistant to a maximum of four different antimicrobials. Quinolone resistance was rare, and no resistance against 3rd-generation cephalosporins, meropenem, azithromycin, colistin, gentamicin, or tigecycline was detected. The main associations between AMU and AMR were found at antimicrobial group level when use was compared with the presence of AMR phenotypes. The proportion of resistant isolates was not associated with AMU, and herd size was not associated with either AMU or AMR. We suggest that the use of narrow-spectrum beta-lactams as a primary treatment option and lack of wide application of oral group medications potentially favors a good resistance pattern in integrated pork production.

8.
Antibiotics (Basel) ; 10(4)2021 Mar 26.
Article in English | MEDLINE | ID: mdl-33810387

ABSTRACT

We recently described the genetic antimicrobial resistance and virulence profile of a collection of 279 commensal E. coli of food-producing animal (FPA), pet, wildlife and human origin. Phenotypic antimicrobial resistance (AMR) and the role of commensal E. coli as reservoir of extra-intestinal pathogenic Escherichia coli (ExPEC) virulence-associated genes (VAGs) or as potential ExPEC pathogens were evaluated. The most common phenotypic resistance was to tetracycline (76/279, 27.24%), sulfamethoxazole/trimethoprim (73/279, 26.16%), streptomycin and sulfisoxazole (71/279, 25.45% both) among the overall collection. Poultry and rabbit were the sources mostly associated to AMR, with a significant resistance rate (p > 0.01) to quinolones, streptomycin, sulphonamides, tetracycline and, only for poultry, to ampicillin and chloramphenicol. Finally, rabbit was the source mostly associated to colistin resistance. Different pandemic (ST69/69*, ST95, ST131) and emerging (ST10/ST10*, ST23, ST58, ST117, ST405, ST648) ExPEC sequence types (STs) were identified among the collection, especially in poultry source. Both ST groups carried high number of ExPEC VAGs (pandemic ExPEC STs, mean = 8.92; emerging ExPEC STs, mean = 6.43) and showed phenotypic resistance to different antimicrobials (pandemic ExPEC STs, mean = 2.23; emerging ExPEC STs, mean = 2.43), suggesting their role as potential ExPEC pathogens. Variable phenotypic resistance and ExPEC VAG distribution was also observed in uncommon ExPEC lineages, suggesting commensal flora as a potential reservoir of virulence (mean = 3.80) and antimicrobial resistance (mean = 1.69) determinants.

9.
Water Res X ; 5: 100038, 2019 Dec 01.
Article in English | MEDLINE | ID: mdl-31660535

ABSTRACT

Karst aquifers have distinctive hydrology and supply 25% of the world's population with drinking water, making them a critical geological setting for understanding and managing microbial water pollution. Rainfall causes elevated concentrations and loading of faecal microorganisms, e.g. E. coli, in catchment surface and groundwater systems, increasing the risk of human exposure to faecally-contaminated water. However, effective management of microbial water quality in complex karst catchments is constrained by limited understanding of E. coli - discharge responses to rainfall. We analysed how rainfall events of varying magnitude (2.4-100 mm) control E. coli-discharge dynamics at increasing spatial scales in a mixed land-use karst catchment in southwest China. During the wet season, hourly water sampling was undertaken throughout five storm events to characterise in high detail E. coli emergence with resulting flow across multiple sites of varying catchment area, stream order, and land-use. E. coli concentration was found to increase by 1-3 orders of magnitude following rainfall events. Maximum E. coli concentration and speed of E. coli recession were influenced by rainfall (amount, intensity), timing of agricultural activities, and position in the hydrological system. For high intensity events ∼90% of the cumulative E. coli export occurred within 48 h. E. coli concentration increased with increasing discharge at all sites. E. coli concentration at low discharge was higher in the headwaters than at the catchment outlet, while the rate of increase in E. coli concentration with increasing discharge appears to follow the opposite trend, being higher at the catchment outlet than the headwaters. This was attributed to the decreasing flow path gradient and increasing degree of development of the fissure network, but further event monitoring at varying catchment scales is required to confirm this relationship. The results provide novel insight into how rainfall characteristics combine with land-use and catchment hydrology to control E. coli export in karst landscapes.

10.
Article in English | MEDLINE | ID: mdl-31491848

ABSTRACT

Estuarine sediments are a reservoir for faecal bacteria, such as E. coli, where they reside at greater concentrations and for longer periods than in the overlying water. Faecal bacteria in sediments do not usually pose significant risk to human health until resuspended into the water column, where transmission routes to humans are facilitated. The erosion resistance and corresponding E. coli loading of intertidal estuarine sediments was monitored in two Scottish estuaries to identify sediments that posed a risk of resuspending large amounts of E. coli. In addition, models were constructed in an attempt to identify sediment characteristics leading to higher erosion resistance. Sediments that exhibited low erosion resistance and a high E. coli loading occurred in the upper- and mid-reaches of the estuaries where sediments had higher organic content and smaller particle sizes, and arose predominantly during winter and autumn, with some incidences during summer. Models using sediment characteristics explained 57.2% and 35.7% of sediment shear strength and surface stability variance respectively, with organic matter content and season being important factors for both. However large proportions of the variance remained unexplained. Sediments that posed a risk of resuspending high amounts of faecal bacteria could be characterised by season and sediment type, and this should be considered in the future modelling of bathing water quality.


Subject(s)
Escherichia coli/isolation & purification , Estuaries , Geologic Sediments/microbiology , Water Microbiology , Water Quality , Feces/microbiology , Humans , Risk Assessment
11.
Front Microbiol ; 10: 972, 2019.
Article in English | MEDLINE | ID: mdl-31214127

ABSTRACT

Poultry processing systems are a complex network of equipment and automation systems that require a proactive approach to monitoring in order to protect the food supply. Process oversight requires the use of multi-hurdle intervention systems to ensure that any undesirable microorganisms are reduced or eliminated by the time the carcasses are processed into final products. In the present study, whole bird carcass rinses (WBCR) collected at the post-scalder and post-picker locations from three different poultry processing facilities (Plant A: mid-weight broiler processing, B: large-weight broiler processing, C: young broiler (Cornish) processing) were subjected to next generation sequencing (NGS) and microbial quantification using direct plating methods to assess the microbial populations present during these stages of the poultry process. The quantification of aerobic plate counts (APC) and Enterobacteriaceae (EB) demonstrated that reductions for these microbial classes were not consistent between the two sampling locations for all facilities, but did not provide a clear picture of what microorganism(s) may be affecting those shifts. With the utilization of NGS, a more complete characterization of the microbial communities present including microorganisms that would not have been identified with the employed direct plating methodologies were identified. Although the foodborne pathogens typically associated with raw poultry, Salmonella and Campylobacter, were not identified, sequence analysis performed by Quantitative Insights of Microbiology Ecology (QIIME) indicated shifts of Erwinia, Serratia, and Arcobacter, which are microorganisms closely related to Salmonella and Campylobacter. Additionally, the presence of Chryseobacterium and Pseudomonas at both sampling locations and at all three facilities provides evidence that these microorganisms could potentially be utilized to assess the performance of multi-hurdle intervention systems.

12.
Waste Manag ; 87: 537-545, 2019 Mar 15.
Article in English | MEDLINE | ID: mdl-31109554

ABSTRACT

Agricultural intensification can lead to high volumes of livestock faeces being applied to land, either as solid or liquid manures or via direct defecation, and can result in reservoirs of faecal indicator organisms (FIOs) persisting within farmland. Understanding the survival of FIOs, e.g. E. coli, in agricultural environments, and in particular within different livestock faeces, is key to developing catchment management practices for the protection of ecosystem services provided by clean water. Frequently, controlled laboratory studies, under constant temperature regimes, are used to determine the impact of environmental factors on E. coli persistence in livestock faeces; however, such studies oversimplify the diurnal variations and interactions of real world conditions. The aim of this study was to investigate the survival of E. coli using a controlled environment facility, which simulated diurnal variation of temperatures typically experienced during a British spring and summer. The approach provided a comparison of E. coli persistence profiles within faeces of sheep, beef cattle and dairy cattle to allow novel interpretations of E. coli regrowth patterns in contrasting livestock faeces in the period immediately post-defecation. Thus, the coupling of a tightly controlled environment facility with high resolution monitoring enabled the development of a new non-linear, asymptotic description of E. coli proliferation in livestock faeces, with increased potential for E. coli growth observed during warmer temperatures for all livestock types. While this study focused on temperatures typical of the UK, the occurrence of a phase of E. coli regrowth has implications for microbial water quality management worldwide.


Subject(s)
Escherichia coli , Livestock , Animals , Cattle , Cell Proliferation , Ecosystem , Feces , Sheep
13.
Int J Food Microbiol ; 293: 94-101, 2019 Mar 16.
Article in English | MEDLINE | ID: mdl-30677561

ABSTRACT

We evaluated the relative response of generic Escherichia coli (GEC), Shiga toxin-producing E. coli (STEC) and Salmonella enterica to heat, alkaline or acid treatments. GEC included strains from carcasses (n = 24) and trim (n = 25) at a small beef plant where no decontamination interventions are used and at a large plant where multiple decontamination interventions are used (carcass n = 25 and trim n = 25). STEC strains belonging to nine serogroups, included isolates from cattle (n = 53), beef (n = 16) and humans (n = 44). S. enterica strains belonging to 29 serotypes, included isolates from humans (n = 30), poultry (n = 26), pork (n = 10) and beef (n = 33). Strains were grown in Brain Heart Infusion (BHI) broth and subjected to the following treatments: 60 °C for 2 min, 5% lactic acid (pH 2.9) for 1 h at 4 °C, or NaOH (pH 11.0) for 2 h at 4 °C. Median log reductions of the GEC populations after heat, alkaline and acid treatment ranged from 2.3 to 3.8, 0.7 to 2.2 and 0.7 to 1.2 log CFU/mL, respectively. No statistically significant difference in reductions was observed between carcass GEC or trim GEC from the large or small plant, except for a greater reduction in trim GEC from the small plant. Median reductions of the STEC populations ranged from 3.3 to 3.5, 0.0 to 0.6, and 0.3 to 0.5 log CFU/mL after heat, alkaline and acid treatment, respectively. The median reductions were not dependent upon isolation source, except between STEC cattle and human isolates after alkaline treatment, where the reduction of the former was higher by 0.6 log unit. For the Salmonella populations, median log reductions ranged from 3.5 to 4.0, 1.7 to 2.4 and 3.7 to 4.1 log CFU/mL after heat, alkaline and acid treatment, respectively. The reductions were not isolation source related. The median log reductions were in the order GEC < STEC < Salmonella after heat treatment and STEC < GEC < Salmonella after alkaline or acid treatment. Overall, the relative response of GEC, STEC and Salmonella in the model system suggests that exposure to heat or pH-based decontamination interventions in meat plants is not associated with increased resistance among E. coli strains in these environments, and total E. coli counts on beef can be indicative of treatment efficacy for the control of Salmonella by heat, lactic acid and alkaline treatment and for the control of STEC subjected to heat.


Subject(s)
Escherichia coli/drug effects , Salmonella enterica/drug effects , Animals , Cattle , Colony Count, Microbial , Escherichia coli/isolation & purification , Food Contamination , Food Handling , Food Microbiology , Hot Temperature , Humans , Hydrogen-Ion Concentration , Lactic Acid/pharmacology , Meat/microbiology , Salmonella enterica/isolation & purification , Shiga-Toxigenic Escherichia coli/drug effects , Shiga-Toxigenic Escherichia coli/isolation & purification
14.
Environ Sci Pollut Res Int ; 26(8): 7697-7710, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30666574

ABSTRACT

Surveys of extended-spectrum ß-lactamase-producing Enterobacteriaceae (ESBL-pE) in stream water and untreated wastewater were carried out in Okinawa Prefecture, Japan. Thirty-six samples of water were collected from 18 streams in Okinawa Prefecture, as well as ten samples of wastewater flowing into four wastewater treatment plants (WWTPs). We investigated bacterial species, Escherichia coli O antigen, ESBL phenotype, ESBL genotype, and pulsed-field gel electrophoresis (PFGE) type of isolates, and total viable count and fecal coliforms as indicator organisms. The relation between indicator organisms and ESBL-pE was also validated using the same samples. A total of 141 ESBL-pE including 107 E. coli, 15 Klebsiella pneumoniae, 2 Proteus mirabilis, and 17 other species was isolated from stream water and wastewater. Of the 141 ESBL-pE, 14.9% and 54.6% were found to be blaCTX-M-15 and blaCTX-M-14-like types, respectively, which have been found in hospital isolates in Okinawa. Two pairs of possibly related patterns according to PFGE criteria were isolated from stream water and wastewater in two districts. When ESBL-pE was significantly isolated, total viable count and fecal coliform boundaries were ≥ 6.0 × 103 CFU/ml and ≥ 4.3 × 102 most probable number/100 ml, respectively. These results suggested that ESBL-pE isolated from stream water is human derived, and that total viable count and fecal coliforms will be useful as indicators for confirming the spread of ESBL-pE to the environment by means of simple hygiene surveys.


Subject(s)
Enterobacteriaceae/growth & development , Environmental Monitoring/methods , Water Microbiology , beta-Lactamases/analysis , Electrophoresis, Gel, Pulsed-Field , Escherichia coli , Humans , Japan , Klebsiella pneumoniae , Polymerase Chain Reaction , Proteus mirabilis , Surveys and Questionnaires , Wastewater
15.
Article in English | MEDLINE | ID: mdl-30285535

ABSTRACT

This work reports on the use of pressurized CO2 pretreatment to improve methane yield and pathogen indicator organism die-off in co-settled sewage sludge (SS). Four semi-continuous mesophilic anaerobic digesters were fed on co-settled SS to establish a baseline for performance and stability. One pair of digesters was then fed with co-settled SS pretreated by P CO2 at 2800 kPa for 23 h. The trial continued for 70 days during which specific biogas and methane production, volatile solids destruction and loss of viability of Escherichia coli was monitored in test and control digesters. The pretreatment had no positive influence on any of these parameters, which was further confirmed using batch biochemical methane potential tests and direct measurement of die-off of E. coli and Salmonella enterica in samples of different sizes treated in pressure vessels of different sizes and in matrices of nutrient medium and co-settled SS. Pressurised CO2 pretreatment was effective at killing fecal indicator bacteria in nutrient medium but ineffectual in SS, strongly suggesting that the nature of suspending matrix was a principle determining factor. Paper concludes that pressurized CO2 pretreatment is not a satisfactory approach to improve either biogas production or pathogen destruction in anaerobic digestion.


Subject(s)
Bioreactors/microbiology , Carbon Dioxide/chemistry , Sewage/chemistry , Waste Disposal, Fluid/methods , Anaerobiosis , Biofuels/analysis , Escherichia coli/growth & development , Methane/analysis
16.
J Dairy Sci ; 101(9): 7746-7756, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29908800

ABSTRACT

Microbial spoilage of pasteurized fluid milk is typically due to either (1) postpasteurization contamination (PPC) with psychrotolerant gram-negative bacteria (predominantly Pseudomonas) or (2) growth of psychrotolerant sporeformers (e.g., Paenibacillus) that have the ability to survive pasteurization when present as spores in raw milk, and to subsequently grow at refrigeration temperatures. While fluid milk quality has improved over the last several decades, continued reduction of PPC is hampered by the lack of rapid, sensitive, and specific methods that allow for detection of PPC in fluid milk, with fluid milk processors still often using time-consuming methods (e.g., Moseley keeping quality test). The goal of this project was to utilize a set of commercial fluid milk samples that are characterized by a mixture of samples with PPC due to psychrotolerant gram-negative bacteria and samples with presence and growth of psychrotolerant sporeforming bacteria to evaluate different approaches for rapid detection of PPC. Comprehensive microbiological shelf-life characterization of 105 pasteurized fluid milk samples obtained from 20 dairy processing plants showed that 60/105 samples reached bacterial counts >20,000 cfu/mL over the shelf-life due to PPC with gram-negative bacteria. Among these 60 samples with evidence of gram-negative PPC spoilage over the shelf-life, 100% (60/60) showed evidence of contamination with noncoliform, non-Enterobacteriaceae (EB) gram-negative bacteria (e.g., Pseudomonas), 20% (12/60) showed evidence of contamination with coliforms, and 7% (4/60) showed evidence of contamination with noncoliform EB. Among the remaining 45 samples, 28 showed levels of gram-positive bacteria above 20,000 cfu/mL and the remaining 17 samples did not exceed 20,000 cfu/mL over the shelf-life. Evaluation of the same set of 105 samples using 6 different approaches {all possible combinations of 2 different enrichment protocols (13°C or 21°C for 18 h) and 3 different plating media [crystal violet tetrazolium agar, EB Petrifilm (3M, St. Paul, MN), and Coliform Petrifilm]} showed that enrichment at 21°C for 18 h, followed by plating on crystal violet tetrazolium agar provided for the most sensitive, accelerated detection of samples that reached >20,000 cfu/mL due to PPC with psychrotolerant gram-negatives (70% sensitivity). These results show that tests still required and traditionally used in the dairy industry (e.g., coliform testing) are not suitable for monitoring for PPC. Rather, approaches that allow for detection of all gram-negative bacteria are essential for improved detection of PPC in fluid milk.


Subject(s)
Bacterial Load , Food Contamination/analysis , Food Handling/methods , Milk/microbiology , Animals , Colony Count, Microbial , Food Microbiology , Paenibacillus , Pasteurization , Temperature
17.
Sci Total Environ ; 616-617: 678-687, 2018 Mar.
Article in English | MEDLINE | ID: mdl-29111257

ABSTRACT

Effective management of diffuse microbial water pollution from agriculture requires a fundamental understanding of how spatial patterns of microbial pollutants, e.g. E. coli, vary over time at the landscape scale. The aim of this study was to apply the Visualising Pathogen &Environmental Risk (ViPER) model, developed to predict E. coli burden on agricultural land, in a spatially distributed manner to two contrasting catchments in order to map and understand changes in E. coli burden contributed to land from grazing livestock. The model was applied to the River Ayr and Lunan Water catchments, with significant correlations observed between area of improved grassland and the maximum total E. coli per 1km2 grid cell (Ayr: r=0.57; p<0.001, Lunan: r=0.32; p<0.001). There was a significant difference in the predicted maximum E. coli burden between seasons in both catchments, with summer and autumn predicted to accrue higher E. coli contributions relative to spring and winter (P<0.001), driven largely by livestock presence. The ViPER model thus describes, at the landscape scale, spatial nuances in the vulnerability of E. coli loading to land as driven by stocking density and livestock grazing regimes. Resulting risk maps therefore provide the underpinning evidence to inform spatially-targeted decision-making with respect to managing sources of E. coli in agricultural environments.


Subject(s)
Environmental Monitoring , Escherichia coli/growth & development , Feces/microbiology , Grassland , Models, Theoretical , Soil Microbiology , Agriculture , Animals , Livestock
18.
Article in Korean | WPRIM (Western Pacific) | ID: wpr-716738

ABSTRACT

In order to investigate the occurrence of norovirus in rivers and beaches, a total of 81 samples were tested at seven sites of Oncheon stream, Suyeong river and Gwanganri beach in Busan from January to November, 2017. To improve the detection of norovirus from sea water, we applied the inorganic cation-coated filter method which showed 48.8% ± 12.2% (n=3) and 27.4% ± 6.0% (n=3) recovery yields from river water and sea water inoculated with Norovirus, respectively. Norovirus was detected in a total of four samples (4.9%), which all were GII genotype. Norovirus GII was detected in three samples at two waste water treatment plants (WWTP) outlet and one sample at about 500 meter downstream from WWTP in both the winter and spring seasons. We also monitored fecal indicator organisms, Escherichia coli (E. coli), Enterococcus and coliphages [somatic coliphages (SC), male-specific coliphages (MSC)] to analyze the potential transmission of enteritis causative agent in dry and wet days. Bacterial influences were found at the site of the WWTP effluents in the dry days and spread further to the costal beach in the wet days. But no viral influences were found in the river downstream in both dry and wet days.


Subject(s)
Coliphages , Enteritis , Enterococcus , Escherichia coli , Genotype , Korea , Methods , Norovirus , Rivers , Seasons , Seawater , Wastewater , Water
19.
Sci Total Environ ; 612: 840-852, 2018 Jan 15.
Article in English | MEDLINE | ID: mdl-28881307

ABSTRACT

An 11year dataset of concentrations of E. coli at 10 spatially-distributed sites in a mixed land-use catchment in NE Scotland (52km2) revealed that concentrations were not clearly associated with flow or season. The lack of a clear flow-concentration relationship may have been due to greater water fluxes from less-contaminated headwaters during high flows diluting downstream concentrations, the importance of persistent point sources of E. coli both anthropogenic and agricultural, and possibly the temporal resolution of the dataset. Point sources and year-round grazing of livestock probably obscured clear seasonality in concentrations. Multiple linear regression models identified potential for contamination by anthropogenic point sources as a significant predictor of long-term spatial patterns of low, average and high concentrations of E. coli. Neither arable nor pasture land was significant, even when accounting for hydrological connectivity with a topographic-index method. However, this may have reflected coarse-scale land-cover data inadequately representing "point sources" of agricultural contamination (e.g. direct defecation of livestock into the stream) and temporal changes in availability of E. coli from diffuse sources. Spatial-stream-network models (SSNMs) were applied in a novel context, and had value in making more robust catchment-scale predictions of concentrations of E. coli with estimates of uncertainty, and in enabling identification of potential "hot spots" of faecal contamination. Successfully managing faecal contamination of surface waters is vital for safeguarding public health. Our finding that concentrations of E. coli could not clearly be associated with flow or season may suggest that management strategies should not necessarily target only high flow events or summer when faecal contamination risk is often assumed to be greatest. Furthermore, we identified SSNMs as valuable tools for identifying possible "hot spots" of contamination which could be targeted for management, and for highlighting areas where additional monitoring could help better constrain predictions relating to faecal contamination.


Subject(s)
Environmental Monitoring , Escherichia coli/isolation & purification , Feces , Water Microbiology , Agrochemicals , Animals , Hydrology , Livestock , Scotland , Seasons , Spatial Analysis
20.
Sci Total Environ ; 624: 638-647, 2018 May 15.
Article in English | MEDLINE | ID: mdl-29272833

ABSTRACT

Turbidity in water can be caused by a range of different turbidity causing materials (TCM). Here the characteristics and attachment of bacteria to TCMs was assessed and the resultant impact on UV disinfection determined. TCMs represent potential vehicles for bacterial penetration of water treatment barriers, contamination of potable supplies and impact on subsequent human health. The TCMs under investigation were representative of those that may be present in surface and ground waters, both from the source and formed in the treatment process. The TCMs were chalk, Fe (III) hydroxide precipitate, kaolin clay, manganese dioxide and humic acids, at different turbidity levels representative of source waters (0, 0.1, 0.2, 0.4, 1, 2, and 5 NTU). Escherichia coli and Enterococcus faecalis attachment followed the order of Fe(III)>chalk, with little to no attachment seen for MnO2, humic acids and clay. The attachment was postulated to be due to chalk and Fe(III) particles having a more neutral surface charge resulting in elevated aggregation with bacteria compared to other TCMs. The humic acids and Fe(III) were the TCMs which influenced inactivation of E. coli and E. faecalis due to decreasing UV transmittance (UVT) with increasing TCM concentration. The presence of the Fe(III) TCM at 0.2 NTU resulted in the poorest E. coli inactivation, with 2.5 log10 reduction at UV dose of 10mJcm-2 (kd of -0.23cm2mJ-1) compared to a 3.9 log10 reduction in the absence of TCMs. E. faecalis had a greater resistance to UV irradiation than E. coli for all TCMs. Effective disinfection of drinking water is a priority for ensuring high public health standards. Uniform regulations for turbidity levels for waters pre-disinfection by UV light set by regulators may not always be appropriate and efficacy is dependent on the type, as well as the amount, of turbidity present in the water.


Subject(s)
Disinfection/methods , Ultraviolet Rays , Water Microbiology , Water Pollutants, Chemical/analysis , Enterococcus faecalis , Escherichia coli , Ferric Compounds/analysis , Humic Substances/analysis , Water Purification
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