Seasonality of freshwater bacterioplankton diversity in two tropical shallow lakes from the Brazilian Atlantic Forest.

Bacteria are highly important for the cycling of organic and inorganic matter in freshwater environments; however, little is known about the diversity of bacterioplankton in tropical systems. Studies on carbon and nutrient cycling in tropical lakes suggest a very different seasonality from that of temperate climates. Here, we used 16S rRNA gene next-generation sequencing (NGS) to investigate seasonal changes in bacterioplankton communities of two tropical lakes, which differed in trophic status and mixing regime. Our findings revealed seasonally and depth-wise highly dynamic bacterioplankton communities. Differences in richness and structure appeared strongly related to the physicochemical characteristics of the water column, especially phosphate, pH and oxygen. Bacterioplankton communities were dominated by common taxonomic groups, such as Synechococcus and Actinobacteria acI, as well as rare and poorly characterized taxa such as 'Candidatus Methylacidiphilum' (Verrucomicrobia). Stratification and oxygen depletion during the rainy season promoted the occurrence of anoxygenic phototrophic and methanotrophic bacteria important for carbon and nutrient cycling. Differences in lake mixing regime were associated with seasonal beta diversity. Our study is the first attempt to use NGS for cataloging the diversity of bacterioplankton communities in Brazilian lakes and thus contributes to the ongoing worldwide endeavor to characterize freshwater lake bacterioplankton signatures.

Reproducción de Saccodon dariensis (Teleostei: Parodontidae) en afluentes del río Guatapé, cuenca del río Magdalena, Colombia / Reproduction of Saccodon dariensis (Teleostei: Parodontidae) in Guatapé River tributaries, Magdalena River basin, Colombia

ResumenColombia posee una alta diversidad de peces de montaña dentro de la región Andina, con alto número de endemismos, por lo que el conocimiento de su biología reproductiva es necesario para su protección y conservación. Se estudió la biología reproductiva de Saccodon dariensis en las quebradas Peñoles y El Cardal, parte media del río Guatapé, cuenca del río Magdalena, Colombia, para determinar si existen diferencias reproductivas entre individuos con diferente polimorfismo bucal (morfo i vs morfo iv, definidos por Roberts, 1974) que permitan definir un posible aislamiento reproductivo espacial o temporal. Se realizaron diez muestreos de campo entre octubre 2007 y febrero 2012, en períodos de lluvia (octubre y noviembre 2007, mayo 2008 y noviembre 2011) seco (enero y marzo 2010, febrero 2012), transición de lluvia a seca (junio 2011) y transición de seca a lluvia (marzo 2008 y septiembre 2011). Se efectuaron capturas de individuos por medio de equipo de electropesca y de atarraya con ojo de malla de 1 cm. Se analizaron 468 especímenes, de los cuales 268 fueron hembras y 200 machos. La talla media de captura para el total de individuos estudiados fue de 109.6 mm de LE (65.5-174.0 mm), siendo para las hembras de 108.0 (67.7-174.0) mm de LE y para los machos de 111.9 mm de LE (65.5-149.4). Las hembras predominaron en las capturas, y la proporción de sexos de 1.0:1.34 se desvió significativamente de la distribución teórica 1:1. Igualmente el morfotipo iv predominó en las capturas y la proporción de morfotipos fue de 1.0:1.48. Con base en la evolución mensual del índice gonadosomático (IGS) y la proporción de individuos maduros, la temporada de desove se produce durante los períodos de transición de temporada seca a lluvia cuando empieza a subir el nivel de las aguas. Los menores valores del factor de condición que coinciden con los valores máximos del iGS indican que esta especie acumula reservas de energía corporal que son utilizadas durante la maduración gonadal y el desove. La talla media de madurez sexual (L50) para los individuos de S dariensis se alcanzó en las hembras a los 88.8 mm de LE y en los machos a los 109.3 mm de LE. La fecundidad fluctuó entre 1 137 y 39 303 ovocitos (media= 8309; DE= 9 021) y la fecundidad relativa osciló entre 144 y 1 131 ovocitos / g de peso total (media= 439 ± 212). El diámetro de los oocitos fue de 0.54 mm (SD= 0.07). No se observó desarrollo diferente en ovocitos, lo que sugiere un desove masivo. La coexistencia de los dos morfotipos, la reproducción externa y la ocurrencia simultánea de los picos reproductivos encontrada en este estudio, no proporcionan apoyo a un posible aislamiento reproductivo espacial o temporal de los morfotipos.

AbstractThe Andean mountain region of Colombia has a high diversity of fish, with high number of endemic species. To promote their protection and conservation, the knowledge of their general and reproductive biology is necessary. With this aim, the reproductive biology of Saccodon dariensis, in the Peñoles and El Cardal creeks, Guatape River mid-basin, Magdalena River Basin, was studied, to determine reproductive differences between individuals with different oral polymorphism (morpho i vs. morpho iv, according to Roberts, 1974), and to define a possible spatial or temporal reproductive isolation. Ten field samplings were carried out between October 2007 and February 2012, in periods of rain (October and November 2007, May 2008 and November 2011), dry (January and March 2010, February 2012), transition from rain to dry (June 2011) and transition from dry to rain (March 2008 and September 2011). Samples were caught using electrofishing equipment and cast nets (10 mm between knots). A total of 468 specimens were analyzed, 268 of which were females and 200 males. The average catch size for the total number of individuals studied was 109.6 mm SL (65.5-174.0 mm), with 108.0 mm SL for females (67.7-174.0) and 111.9 mm SL (65.5-149.4) for males. Females predominated in the catches, and the sex ratio of 1.0:1.34 significantly deviated from the theoretical distribution 1:1. Similarly, morpho iv predominated in the catches, and morphs ratio was 1.00:1.48. Based on the monthly evolution of the gonadosomatic index (GSI) and the proportion of mature specimens, the spawning season occurs during periods of transition from dry to rainy season when water level begins to raise. The lowest values of the condition factor that match the maximum values of GSi, indicates that this species accumulated body energy reserves that are used during the gonadal maturation and spawning. The mean size at sexual maturity (L50) was 88.8 mm SL in females and 109.3 mm SL in males. The fecundity of S. dariensis fluctuated between 1 137 and 39 303 (mean = 8 309, SD = 9 021) and the relative fecundity between 144 and 1 131 oocytes/g of total weight (mean = 439 ± 212). The diameter of the oocytes was 0.54 mm (SD = 0.07). Different development in oocytes was not observed, suggesting massive spawning. The coexistence of the two morphs, external fertilization and simultaneous occurrence of reproductive peaks found in this study did not provide support for a possible spatial or temporal reproductive isolation of morphotypes. Rev. Biol. Trop. 64 (2): 635-653. Epub 2016 June 01.

A survey on cultivable heterotrophic bacteria inhabiting a thermally unstratified water column in an Atlantic Rainforest lake.

Due to the importance of heterotrophic bacteria in biogeochemical cycles and their influence on water quality, many studies have assessed the composition of the bacterial community. Most of these were made in temperate freshwaters. Eighteen heterotrophic bacteria communities distributed over time and space in the water column of Carioca Lake, not exposed to anthropogenic activities, were analyzed to characterize their composition. A polyphasic approach was used, including 16S rDNA restriction analysis, 16S rRNA gene sequence analysis, BIOLOG Ecoplates and statistical methods. The physiological profiles among the 18 microbial communities were diverse. Clustering analysis and the metabolic fingerprint of the Biolog Ecoplate(TM) system data separated the communities based on temporal scale. A set of 673 isolates were recovered on high nutrient medium. The 673 isolates obtained yielded 360 Amplified Ribosomal DNA Restriction Analysis (ARDRA) Operational Taxonomic Units (OTUs). Most (313) of the ARDRA patterns, OTUs, were from isolates obtained in a single sampling point, in temporal and spatial scales, indicating changes in the bacterial community. A subset of representative isolates for each ARDRA OTU was identified by 16S rRNA gene fragment sequencing and categorized into five phyla, Proteobacteria, Actinobacteria, Bacteroidetes, Firmicutes, and Deinococcus-Thermus, represented by 38 genera. The results of this work contribute to a better understanding about the phylogeny of tropical freshwater heterotrophic bacteria.

Biología alimentaria y reproductiva de Farlowella vittata (Siluriformes: Loricariidae) en la cuenca del río Güejar, Orinoquía, Colombia

Food and reproductive biology of Farlowella vittata (Siluriformes: Loricariidae) in Güejar River Basin, Orinoco, Colombia. Neotropical fish live in streams with considerable spatial and temporal variability of their food items. Food availability depends on different factors such as discharge, channel morphology, physicochemical conditions and interactions with other species, as well as their food habits. On the other side, good food availability results in reproductive success. Because the study of those changes contributes to a better understanding of trophic interactions in fish populations, the present work describes and evaluates aspects of diet and reproduction of Farlowella vittata in Pringamosal Creek, Güejar River drainage, Orinoco River basin, Colombia. Five collecting expeditions were done during both high and low rain seasons of 2008 and 2009. Physical and chemical water parameters were measured, and fish were captured from several points along the total length of the 7km stream, to characterize their biometry and stomach contents. Our results showed that Pringamosal creek is a first order stream, about 3.5m wide and with an average depth of 1m in our study area. Dissolved oxygen values were 6.2mg/L during low water and 2.7mg/L during high water phase. The creek is classified as oligotrophic but with a tendency to eutrophication. A total of 130 fish samples were analyzed. Fishes were assigned to seven size range categories between 86.0 and 175.5mm standard length (SL). Stomach contents revealed that the diet of this species consisted mainly of algae (Bacillariophyceae) (84.6% Abundance Relative), but we observed a variation in the diet according to season; during low rainfall it feeds on phytoplankton (86.47% A.R.) and during high rainfall on zooplankton as well as plant material and organic material (0.685% A.R. and 18.83% A.R., respectively). A Kruskal-Wallis ANOVA showed statistically significant differences in food items between sexes. The condition factor (K) indicated that the species was well fed. Size at sexual maturity was 154mm SL for males and 124mm SL for females. The gonadosomatic index (RGS) showed that this fish reproduced during high water (April-May) season, and females showed a fecundity of 1 819 ovocites, with an average diameter of 1.4mm. Although parental care was not observed during this study, it is well known that males protect their eggs and juveniles, making them easy to capture during the breeding periods identified in this study, and at the same time, vulnerable to overexploitation. We recommend an urgent management plan for the conservation of this species, since at this time, no fishing controls are enforced even though it is harvested as an ornamental species.

Los peces de quebradas neotropicales conviven con una considerable variación espacial y temporal de sus alimentos. La disponibilidad de estos alimentos depende de diferentes factores tales como la morfología de los canales, la descarga, atributos físico-químicos y las interacciones con otras especies. Es así como estudios de los hábitos alimenticios contribuyen a la comprensión de las interacciones tróficas de las poblaciones de peces. En el presente trabajo se describen y evalúan los aspectos de la dieta y la reproducción de Farlowella vittata (Siluriformes: Loricariidae) en el Arroyo Pringamosal, cuenca del río Güejar, cuenca del río Orinoco, Colombia. Se realizaron cinco expediciones de recolecta durante las temporadas de altas y bajas lluvias. Variables físicas y químicas del agua fueron medidas y los peces fueron capturados en varios puntos a lo largo de toda la cuenca. El arroyo Pringamosal es una corriente de primer orden con 3.5m de ancho y una profundidad media de 1m en el área de estudio. Valores de oxígeno disuelto son de 6.2mg/L durante bajas lluvias y 2.7mg/L durante altas lluvias, es oligotrófico con tendencia a la eutrofización. Ciento treinta ejemplares fueron analizados, 7 intervalos de tallas fueron recolectadas entre los 86.0 y 175.5mm de longitud estándar. La dieta de esta especie consiste principalmente de algas (Bacillariophyceae) (84.6% AR), pero se observó una variación en la dieta de acuerdo a la temporada; en bajas lluvias se alimenta de fitoplancton (86.47% A.R.) y en altas lluvias de zooplankton y material de origen vegetal y orgánico (0.685% A.R y 18.83% A.R. respectivamente), el ANDEVA de KruskalWallis mostró diferencias estadísticamente significativas de los ítems alimenticios entre sexos. El factor de condición (K) indicó que la especie se encontró bien alimentada. El índice gonadosomático (RGS) mostró que este pez se reproduce en aguas altas (abril-mayo). La fecundidad fue 1 819 ovocitos con un diámetro medio de 1.4mm. Talla de primera madurez sexual fue de 154mm de longitud estándar para machos, y SL 124mm para hembras. Aunque no se observo cuidado parental es bien conocido que los machos de esta especie lo presentan, haciendo mas fácil su captura durante los periodos reproductivos identificados en este estudio y vulnerable a la sobreexplotación. Se recomienda establecer planes de manejo y conservación de esta especie ya que es explotada sin control como especie ornamental.

Water quality and diversity of yeasts from tropical lakes and rivers from the Rio Doce basin in Southeastern Brazil

Yeast communities were assessed in 14 rivers and four lakes from the Doce River basin in Brazil, during the rainy and dry seasons of the years 2000 and 2001. Water samples were collected at the subsurface in all sites. The following physical and chemical parameters were measured: temperature, dissolved oxygen, pH, electrical conductivity, total phosphorus, ortho-phosphate, ammonium, nitrate, nitrite and total nitrogen and the counts of faecal coliforms and heterotrophic bacteria were carried out to characterize the aquatic environmental sampled. The yeast counts were higher in aquatic environments with the highest counts of coliform and heterotrophic bacteria. These environments receive a high influx of domestic and industrial waste. A total of 317 isolates identified in forty eight yeast species were recorded in the sites sampled and the specie Aureobasidium pullulans were found in eleven out of eighteen sites sampled and some opportunistic pathogens such as the yeast species Candida krusei were isolated only in the polluted rivers with a positive correlation with the biotic and abiotic parameters that indicate sewage contamination.

Water quality and diversity of yeasts from tropical lakes and rivers from the Rio Doce basin in Southeastern Brazil

Yeast communities were assessed in 14 rivers and four lakes from the Doce River basin in Brazil, during the rainy and dry seasons of the years 2000 and 2001. Water samples were collected at the subsurface in all sites. The following physical and chemical parameters were measured: temperature, dissolved oxygen, pH, electrical conductivity, total phosphorus, ortho-phosphate, ammonium, nitrate, nitrite and total nitrogen and the counts of faecal coliforms and heterotrophic bacteria were carried out to characterize the aquatic environmental sampled. The yeast counts were higher in aquatic environments with the highest counts of coliform and heterotrophic bacteria. These environments receive a high influx of domestic and industrial waste. A total of 317 isolates identified in forty eight yeast species were recorded in the sites sampled and the specie Aureobasidium pullulans were found in eleven out of eighteen sites sampled and some opportunistic pathogens such as the yeast species Candida krusei were isolated only in the polluted rivers with a positive correlation with the biotic and abiotic parameters that indicate sewage contamination.(AU)

Water quality and diversity of yeasts from tropical lakes and rivers from the Rio Doce basin in Southeastern Brazil.

Yeast communities were assessed in 14 rivers and four lakes from the Doce River basin in Brazil, during the rainy and dry seasons of the years 2000 and 2001. Water samples were collected at the subsurface in all sites. The following physical and chemical parameters were measured: temperature, dissolved oxygen, pH, electrical conductivity, total phosphorus, ortho-phosphate, ammonium, nitrate, nitrite and total nitrogen and the counts of faecal coliforms and heterotrophic bacteria were carried out to characterize the aquatic environmental sampled. The yeast counts were higher in aquatic environments with the highest counts of coliform and heterotrophic bacteria. These environments receive a high influx of domestic and industrial waste. A total of 317 isolates identified in forty eight yeast species were recorded in the sites sampled and the specie Aureobasidium pullulans were found in eleven out of eighteen sites sampled and some opportunistic pathogens such as the yeast species Candida krusei were isolated only in the polluted rivers with a positive correlation with the biotic and abiotic parameters that indicate sewage contamination.

Alimentação e ecomorfologia de duas espécies de piranhas (Characiformes: Characidae) do lago de Viana, estado do Maranhão, Brasil

Serrasalmus aff. brandtii and Pygocentrus nattereri are two species of piranhas, both common in the Viana Lake, which is formed by the flooding waters of the Pindaré River, a tributary of the left bank of the Mearim River. A sample composed of 249 specimens of these species was studied in order to identify diet composition and feeding strategies employed by the two species. The piranhas were captured thrimonthly, during one year from March 1998 to March 1999 using gill and fishing nets of different mesh sizes. The qualitative composition of the diet was analysed through the frequency of occurrence method. The feeding strategies employed by the piranhas were inferred using the graphic method of Costello (1990), modified by Amundsen et al. (1996). The results indicated that fish was the main food item in the stomach contents of the two species, followed by plant material, more in the P. nattereri. Fish and plant material showed different relationships in relation to piranhas's length classes. The graphic analysis of the feeding strategies employed by P. nattereri and S. aff. brandtii suggest a generalist habit, wide width niche with strong participation of the within-phenotype component, which indicated that the majority of individuals of these species use several resources simultaneously. A multivariate analysis of the ecomorphological index indicated that the species are discriminated by swimming ability, water column position and relative prey size.

Serrasalmus aff. brandtii e Pygocentrus nattereri são duas espécies de piranhas comuns no Lago de Viana, um lago formado a partir das inundações do Rio Pindaré, tributário da margem esquerda do Rio Mearim. Uma amostra composta por 249 exemplares destas espécies foi estudada a fim de identificar a composição da dieta e as estratégias alimentares empregadas pelas duas. Os peixes foram coletados trimestralmente durante um ano, entre março de 1998 e março de 1999, usando redes de emalhar e tarrafas. A composição qualitativa da dieta foi analisada com uso do método de freqüência de ocorrência. As estratégias alimentares empregadas pelas espécies foram inferidas através do método gráfico de Costello (1990), modificado por Amundsen et al. (1996). Os resultados indicaram que peixes foi o item encontrado com maior freqüência nos estômagos de ambas as espécies, seguido de matéria vegetal, com maior participação na dieta de P. nattereri. Os recursos peixes e vegetais tenderam a apresentar relações inversas quando comparados com as diferentes classes de comprimento. A análise gráfica da dieta de P. nattereri e S. aff. brandtii sugere que a maioria dos indivíduos utiliza vários recursos simultaneamente. Uma análise multivariada de índices ecomorfológicos indicou que as espécies são segregadas com relação à habilidade natatória, posição ocupada na coluna d'água e tamanho relativo das presas.