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1.
Biosci Biotechnol Biochem ; 83(9): 1642-1649, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31112101

ABSTRACT

Abscisic acid (ABA) is one of the plant hormones that regulates physiological functions in various organisms, including plants, sponges, and humans. The biosynthetic machinery in plants is firmly established, while that in fungi is still unclear. Here, we elucidated the functions of the four biosynthetic genes, bcABA1-bcABA4, found in Botrytis cinerea by performing biotransformation experiments and in vitro enzymatic reactions with putative biosynthetic intermediates. The first-committed step is the cyclization of farnesyl diphosphate to give α-ionylideneethane catalyzed by a novel sesquiterpene synthase, BcABA3, which exhibits low amino acid sequence identities with sesquiterpene synthases. Subsequently, two cytochrome P450s, BcABA1 and BcABA2, mediate oxidative modifications of the cyclized product to afford 1',4'-trans-dihydroxy-α-ionylideneacetic acid, which undergoes alcohol oxidation to furnish ABA. Our results demonstrated that production of ABA does not depend on the nucleotide sequence of bcABA genes. The present study set the stage to investigate the role of ABA in infections.


Subject(s)
Abscisic Acid/biosynthesis , Botrytis/metabolism , Plant Growth Regulators/biosynthesis , Biosynthetic Pathways , Cyclization , Mass Spectrometry
2.
Plant Sci ; 283: 116-126, 2019 Jun.
Article in English | MEDLINE | ID: mdl-31128681

ABSTRACT

Ethylene response factors (ERFs) are known to regulate fruit ripening. However, the ERF regulatory networks are not clear. In this study, we have shown that peach (Prunus persica) PpeERF2 regulates fruit ripening through suppressing the expression of two ABA biosynthesis genes (PpeNCED2, PpeNCED3) and a cell wall degradation gene (PpePG1). The transcript levels of PpeERF2 in fruit were opposite to that of PpeNCED2, PpeNCED3 and PpePG1 during ripening and in response to various ripening treatments. PpeERF2 was found to bind to the PpeNCED2, PpeNCED3 and PpePG1 promotors as demonstrated by yeast one-hybrid (Y1H) and EMSA assays; and further found to repress the promoter activities of the three genes in tobacco leaf tissues after Agrobacterium infiltration. Taken together, these results provide new information for a better understanding of the crosstalk network between ethylene signaling, cell wall degradation and ABA biosynthesis during fruit ripening.


Subject(s)
Abscisic Acid/biosynthesis , Cell Wall/metabolism , Fruit/metabolism , Plant Proteins/physiology , Prunus persica/metabolism , Repressor Proteins/physiology , Abscisic Acid/metabolism , Cloning, Molecular , Electrophoretic Mobility Shift Assay , Fruit/growth & development , Fruit/physiology , Gene Expression Regulation, Plant , Genes, Plant , Phylogeny , Plant Proteins/genetics , Plant Proteins/metabolism , Polymerase Chain Reaction , Prunus persica/genetics , Prunus persica/growth & development , Prunus persica/physiology , Repressor Proteins/genetics , Repressor Proteins/metabolism , Sequence Alignment , Two-Hybrid System Techniques
3.
Plant Sci ; 283: 165-176, 2019 Jun.
Article in English | MEDLINE | ID: mdl-31128686

ABSTRACT

The effect of temperature on the concentrations of anthocyanins and endogenous plant hormones [abscisic acid (ABA), auxin, and cytokinin] were investigated using the detached berries of two related red-skinned cultivars cv. 'Aki Queen' and 'Ruby Roman' of the table grape Vitis labrusca L. × Vitis vinifera L. The total anthocyanin concentration of both cultivars was lower when exposed to high rather than low temperatures after véraison (the onset of ripening). However, the responses to temperature differed between the two cultivars, and anthocyanin accumulation could occur in 'Ruby Roman' at a higher temperature than in 'Aki Queen'. High temperatures increased the expression of VlMybA1-2 and VlMybA1-3, which encode myeloblastosis (MYB)-related transcription factors; however, the expression of the anthocyanin biosynthesis-related structural genes uridine diphosphate-d-glucose: flavonoid 3-O-glucosyltransferase, flavonoid 3'5' hydroxylase, and flavonoid O-methyltransferase at different temperatures did not correspond with that of the expression of MybAs. The concentration of ABA and its derivatives increased under high temperatures, but that of auxin and cytokinin decreased. The observation that high temperatures induced the accumulation of ABA and expression of VlMybA1s but not the expression of anthocyanin biosynthesis-related structural genes implied the operation of a mechanism different from up-regulation of anthocyanin synthesis by VlMybA1s in the temperature response of grape berries.


Subject(s)
Abscisic Acid/biosynthesis , Anthocyanins/biosynthesis , Fruit/metabolism , Plant Growth Regulators/biosynthesis , Vitis/metabolism , Cold Temperature , Gene Expression Regulation, Plant/genetics , Hot Temperature , Metabolic Networks and Pathways , Plant Proteins/genetics , Plant Proteins/metabolism , Transcription Factors/genetics , Transcription Factors/metabolism , Transcriptome , Vitis/genetics , Vitis/physiology
4.
BMC Plant Biol ; 19(1): 156, 2019 Apr 25.
Article in English | MEDLINE | ID: mdl-31023216

ABSTRACT

BACKGROUND: Seed germination and seedling establishment are two of the most critical phases in plant development. However, the molecular mechanisms underlying the effect of phosphorus on seed germination and post-germinated growth of oilseed rape are unclear so far. Here, we report the role of BnPHT1;4 in seed germination and early seedling development of Brassica napus. RESULTS: Our results show that BnPHT1;4 is preferentially expressed in cotyledons of early developing seedlings. Overexpression of BnPHT1;4 in oilseed rape promoted seed germination and seedling growth. Expression levels of the genes related to ABA and GA biosynthesis and signaling were significantly altered in BnPHT1;4 transgenic seedlings. Consequently, active GA level was up-regulated, whereas ABA content was down-regulated in BnPHT1;4 transgenic seedlings. Furthermore, exogenous GA could promote seed germination of wild type, while exogenous ABA could partially recover the advanced-germination phenotype of BnPHT1;4 transgenic seeds. Total phosphorus content in cotyledons of the transgenic seedlings was decreased more rapidly than that in wild type when Pi was supplied or deficient, and Pi contents in shoots and roots of the BnPHT1;4 transgenic plants were higher than those in wild type under high and low Pi conditions. CONCLUSIONS: Our data suggest that the high-affinity transporter BnPHT1;4 is involved in phosphorus acquisition and mobilization for facilitating seed germination and seedling growth of Brassica napus by modulating ABA and GA biosynthesis.


Subject(s)
Brassica napus/metabolism , Germination , Membrane Transport Proteins/metabolism , Phosphorus/metabolism , Plant Proteins/metabolism , Seedlings/growth & development , Seeds/growth & development , Abscisic Acid/biosynthesis , Brassica napus/genetics , Cotyledon/metabolism , Gene Expression Regulation, Plant , Gibberellins/biosynthesis , Membrane Transport Proteins/genetics , Phenotype , Phosphorus/deficiency , Plant Proteins/genetics , Plant Roots/metabolism , Plants, Genetically Modified , Seedlings/metabolism , Seeds/metabolism , Soil
5.
Ecotoxicol Environ Saf ; 177: 100-107, 2019 Aug 15.
Article in English | MEDLINE | ID: mdl-30974243

ABSTRACT

Contamination of vegetable plants with cadmium (Cd) has become a serious issue in recent years. In the present study, pakchoi (Brassica chinensis L.) grown in Cd-contaminated soil inoculated with abscisic acid (ABA)-generating bacteria, Azospirillum brasilense and Bacillus subtilis, showed 28%-281% and 26%-255% greater biomass, and 40%-79% and 43%-77% lower Cd concentrations, respectively, than those of the controlbacteria-free plants. These treatments also alleviated the Cd-induced photosynthesis inhibition and oxidative damage (indicated by malondialdehyde [MDA], H2O2, and O2• -). Furthermore, the application of bacteria also remarkably improved the levels of antioxidant-related compounds (total phenolics, total flavonoids, ascorbate, and 2,2-diphenyl-1-picrylhydrazyl [DPPH] activity) and nutritional quality (soluble sugar and soluble protein) in the Cd-supplied plants. Based on these results, we conclude that the application of ABA-generating bacteria might be an alternative strategy for improving the biomass production and quality of vegetable plants grown in Cd-contaminated soil.


Subject(s)
Abscisic Acid/biosynthesis , Brassica/metabolism , Cadmium/analysis , Soil Pollutants/analysis , Antioxidants/metabolism , Azospirillum brasilense/metabolism , Bacillus subtilis/metabolism , Brassica/microbiology , Cadmium/metabolism , Cadmium/toxicity , Environmental Pollution , Hydrogen Peroxide/metabolism , Malondialdehyde/metabolism , Soil/chemistry , Soil Microbiology , Soil Pollutants/metabolism , Soil Pollutants/toxicity , Vegetables/growth & development , Vegetables/metabolism , Vegetables/microbiology
6.
Int J Mol Sci ; 20(6)2019 Mar 14.
Article in English | MEDLINE | ID: mdl-30875790

ABSTRACT

Kentucky bluegrass (KB, Poa pratensis) is one of the most widely used cool-season turfgrass species, but it is sensitive to drought stress. Molecular studies in KB are hindered by its large and complex genome structure. In this study, a comparative transcriptomic study was conducted between a short and long period of water deficiency. Three transcriptome libraries were constructed and then sequenced by using leaf RNA samples of plants at 0, 2, and 16 h after PEG6000 treatment. A total of 199,083 differentially expressed genes (DEGs) were found. The Kyoto Encyclopedia of Genes and Genomes (KEGG) annotation revealed that DEGs were enriched in "Plant hormone signal transduction" and "MAPK signaling pathway-Plant". Some key up-regulated genes, including PYL, JAZ, and BSK, were involved in hormone signaling transduction of abscisic acid, jasmonic acid, and brassinosteroid and possibly these genes play important roles in coping with drought stress in KB. Furthermore, our results showed that the concentrations of ABA, JA and BR increased significantly with the extension of the drought period. The specific DEGs encoding functional proteins, kinase and transcription factors, could be valuable information for genetic manipulation to promote drought tolerance of KB in the future.


Subject(s)
Gene Expression Profiling/methods , Gene Regulatory Networks , Poa/growth & development , Stress, Physiological , Abscisic Acid/biosynthesis , Brassinosteroids/biosynthesis , Cyclopentanes/metabolism , Droughts , Gene Expression Regulation, Developmental , Gene Expression Regulation, Plant , Kentucky , Molecular Sequence Annotation , Oxylipins/metabolism , Plant Leaves/genetics , Plant Leaves/growth & development , Plant Proteins/genetics , Poa/genetics , Poa/metabolism , Sequence Analysis, RNA
7.
Plant Mol Biol ; 99(4-5): 329-346, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30656555

ABSTRACT

KEY MESSAGE: CPPU-induced San Pedro type fig main crop parthenocarpy exhibited constantly increasing IAA content and more significantly enriched KEGG pathways in the receptacle than in female flowers. N-(2-chloro-4-pyridyl)-N-phenylurea (CPPU) was applied to San Pedro fig (Ficus carica L.) main crop to induce parthenocarpy; the optimal effect was obtained with 25 mg L-1 application to syconia when female flowers were at anthesis. To elucidate the key expression changes in parthenocarpy conversion, significant changes in phytohormone level and transcriptome of fig female flowers and receptacles were monitored. HPLC-MS revealed increased IAA content in female flowers and receptacle 2, 4 and 10 days after treatment (DAT), decreased zeatin level in the receptacle 2, 4 and 10 DAT, decreased GA3 content 2 and 4 DAT, and increased GA3 content 10 DAT. ABA level increased 2 and 4 DAT, and decreased 10 DAT. CPPU-treated syconia released more ethylene than the control except 2 DAT. RNA-Seq and bioinformatics analysis revealed notably more differentially expressed KEGG pathways in the receptacle than in female flowers. In the phytohormone gene network, GA-biosynthesis genes GA20ox and GA3ox were upregulated, along with GA signal-transduction genes GID1 and GID2, and IAA-signaling genes AUX/IAA and GH3. ABA-biosynthesis gene NCED and signaling genes PP2C and ABF were downregulated 10 DAT. One ACO gene showed consistent upregulation in both female flowers and receptacle after CPPU treatment, and more than a dozen of ERFs demonstrated opposing changes in expression. Our results revealed early-stage spatiotemporal phytohormone and transcriptomic responses in CPPU-induced San Pedro fig main crop parthenocarpy, which could be valuable for further understanding the nature of the parthenocarpy of different fig types.


Subject(s)
Cytokinins/metabolism , Cytokinins/pharmacology , Ficus/genetics , Ficus/metabolism , Plant Growth Regulators/biosynthesis , Transcriptome , Abscisic Acid/biosynthesis , Down-Regulation , Ethylenes/biosynthesis , Ficus/drug effects , Ficus/growth & development , Flowers/growth & development , Fruit/growth & development , Gene Expression Profiling , Gene Expression Regulation, Plant/drug effects , Gibberellins/biosynthesis , Indoleacetic Acids/metabolism , Phenylurea Compounds/pharmacology , RNA, Plant/isolation & purification , Signal Transduction , Up-Regulation , Zeatin/biosynthesis
8.
Int J Biol Macromol ; 121: 796-805, 2019 Jan.
Article in English | MEDLINE | ID: mdl-30336242

ABSTRACT

Cytochrome P450 genes as the one of the largest superfamily genes mediate a wide range of plant biochemical pathways. In this study, a full-length cytochrome P450 monooxygenase (CYP736B) cDNA was isolated and characterized from Panax ginseng. It was revealed that the deduced amino acid of PgCYP736B shares a high degree of sequence homology with CYP736A12 encoded by P. ginseng. Expression of PgCYP736B was differentially induced not only during a Pseudomonas syringae infection (7.7-fold) and wounding (47.3-fold) but also after exposure to salt (7.4-fold), cold (8.3-fold), and drought stress (3.24-fold). The gene transcription was highly affected by methyl jasmonate (476-fold) in the ginseng, suggesting that PgCYP736B was elicitor-responsive. Furthermore, we overexpressed the PgCYP736B gene in Arabidopsis and found that PgCYP736B is a transmembrane protein. Overexpression of PgCYP736B in Arabidopsis conferred enhanced resistance to salt stress via decreased H2O2 accumulation, increased carotenoid levels, and through abscisic acid biosynthesis gene expression. Our results suggest that the induction of ginsenoside biosynthetic pathway genes along with PgCYP736B by an exogenous supply of 10-100 µM of squalene most likely affects the metabolite profile of ginsenoside triterpenoid. Overall, our findings indicate that PgCYP736B protects ginseng from salt stress and may contribute to triterpenoid biosynthesis.


Subject(s)
Abscisic Acid/biosynthesis , Cytochrome P-450 Enzyme System/genetics , Panax/genetics , Salt Tolerance/genetics , Squalene/pharmacology , Transcriptional Activation/drug effects , Amino Acid Sequence , Cytochrome P-450 Enzyme System/chemistry , Gene Expression Regulation, Plant/drug effects , Salt Tolerance/drug effects , Stress, Physiological/drug effects , Stress, Physiological/genetics
9.
Proc Natl Acad Sci U S A ; 115(47): E11178-E11187, 2018 11 20.
Article in English | MEDLINE | ID: mdl-30397148

ABSTRACT

The plant hormone abscisic acid (ABA) is accumulated after drought stress and plays critical roles in the responses to drought stress in plants, such as gene regulation, stomatal closure, seed maturation, and dormancy. Although previous reports revealed detailed molecular roles of ABA in stress responses, the factors that contribute to the drought-stress responses-in particular, regulation of ABA accumulation-remain unclear. The enzyme NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3 (NCED3) is essential for ABA biosynthesis during drought stress, and the NCED3 gene is highly induced by drought stress. In the present study, we isolated NGATHAs (NGAs) as candidate transcriptional regulators of NCED3 through a screen of a plant library harboring the transcription factors fused to a chimeric repressor domain, SRDX. The NGA proteins were directly bound to a cis-element NGA-binding element (NBE) in the 5' untranslated region (5' UTR) of the NCED3 promoter and were suggested to be transcriptional activators of NCED3 Among the single-knockout mutants of four NGA family genes, we found that the NGATHA1 (NGA1) knockout mutant was drought-stress-sensitive with a decreased expression level of NCED3 during dehydration stress. These results suggested that NGA1 essentially functions as a transcriptional activator of NCED3 among the NGA family proteins. Moreover, the NGA1 protein was degraded under nonstressed conditions, and dehydration stress enhanced the accumulation of NGA1 proteins, even in ABA-deficient mutant plants, indicating that there should be ABA-independent posttranslational regulations. These findings emphasize the regulatory mechanisms of ABA biosynthesis during early drought stress.


Subject(s)
Abscisic Acid/biosynthesis , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Dioxygenases/metabolism , Gene Expression Regulation, Plant/genetics , Plant Proteins/metabolism , Stress, Physiological/genetics , Transcription Factors/metabolism , 5' Untranslated Regions/genetics , Abscisic Acid/genetics , Arabidopsis Proteins/genetics , Dioxygenases/genetics , Droughts , Plant Proteins/genetics , Plants, Genetically Modified/genetics , Promoter Regions, Genetic/genetics , Stress, Physiological/physiology , Transcription Factors/genetics , Transcriptional Activation/genetics
10.
Int J Mol Sci ; 19(11)2018 Nov 19.
Article in English | MEDLINE | ID: mdl-30463231

ABSTRACT

The plant hormone abscisic acid (ABA) play essential roles in numerous physiological processes such as seed dormancy, seed germination, seeding growth and responses to biotic and abiotic stresses. Such biological processes are tightly controlled by a complicated regulatory network including ABA homoeostasis, signal transduction as well as cross-talking among other signaling pathways. It is known that ABA homoeostasis modulated by its production, inactivation, and transport pathways is considered to be of great importance for plant development and stress responses. Most of the enzymes and transporters involved in ABA homoeostasis have been largely characterized and they all work synergistically to maintain ABA level in plants. Increasing evidence have suggested that transcriptional regulation of the genes involved in either ABA production or ABA inactivation plays vital roles in ABA homoeostasis. In addition to transcription factors, such progress is also regulated by microRNAs and newly characterized root to shoot mobile peptide-receptor like kinase (RLKs) mediated long-distance signal transduction. Thus, ABA contents are always kept in a dynamic balance. In this review, we survey recent research on ABA production, inactivation and transport pathways, and summarize some latest findings about the mechanisms that regulate ABA homoeostasis.


Subject(s)
Abscisic Acid/metabolism , Homeostasis , Plant Development/genetics , Stress, Physiological/genetics , Abscisic Acid/biosynthesis , Abscisic Acid/chemistry , Glycosylation , Models, Biological
12.
Development ; 145(21)2018 11 06.
Article in English | MEDLINE | ID: mdl-30355726

ABSTRACT

Division of the cambial cells and their subsequent differentiation into xylem and phloem drives radial expansion of the hypocotyl. Following the transition to reproductive growth, a phase change occurs in the Arabidopsis hypocotyl. During this second phase, the relative rate of xylem production is dramatically increased compared with that of phloem, and xylem fibres that contain thick secondary cell walls also form. Using two different genetic backgrounds and different environmental conditions, we identified a set of core transcriptional changes that is associated with the switch to the second phase of growth in the hypocotyl. Abscisic acid (ABA) signalling pathways are significantly over-represented in this set of core genes. Reverse genetic analysis demonstrated that mutants that are defective in ABA-biosynthesis enzymes exhibited significantly delayed fibre production without affecting the xylem:phloem ratio, and that these effects can be reversed by the application of ABA. The altered morphology is also reflected at the transcript level, with a reduced expression of marker genes that are associated with fibre formation in aba1 mutants. Taken together, the data reveal an essential role for ABA in the regulation of fibre formation.


Subject(s)
Abscisic Acid/pharmacology , Arabidopsis/cytology , Cell Differentiation/drug effects , Xylem/cytology , Abscisic Acid/biosynthesis , Arabidopsis/drug effects , Arabidopsis/genetics , Flowers/drug effects , Flowers/physiology , Gene Expression Regulation, Plant/drug effects , Genes, Plant , Hypocotyl/drug effects , Hypocotyl/growth & development , Mutation/genetics , Phenotype , Plant Growth Regulators/pharmacology , Transcriptome/drug effects , Transcriptome/genetics , Xylem/drug effects , Xylem/genetics
13.
J Am Chem Soc ; 140(39): 12392-12395, 2018 10 03.
Article in English | MEDLINE | ID: mdl-30226766

ABSTRACT

Abscisic acid (ABA) is a well-known phytohormone that regulates abiotic stresses. ABA produced by fungi is also proposed to be a virulence factor of fungal pathogens. Although its biosynthetic pathway in fungi was proposed by a series of feeding experiments, the enzyme catalyzing the reaction from farnesyl diphosphate to α-ionylideneethane remains to be identified. In this work, we identified the novel type of sesquiterpene synthase BcABA3 and its unprecedented three-step reaction mechanism involving two neutral intermediates, ß-farnesene and allofarnesene. Database searches showed that BcABA3 has no homology with typical sesquiterpene synthases and that the homologous enzyme genes are found in more than 100 bacteria, suggesting that these enzymes form a new family of sesquiterpene synthases.


Subject(s)
Abscisic Acid/biosynthesis , Alkyl and Aryl Transferases/metabolism , Fungi/metabolism , Alkyl and Aryl Transferases/genetics , Catalysis , Fungi/enzymology , Fungi/genetics , Gas Chromatography-Mass Spectrometry , Ligases/genetics , Ligases/metabolism , Sesquiterpenes/metabolism
14.
New Phytol ; 220(3): 893-907, 2018 11.
Article in English | MEDLINE | ID: mdl-30191576

ABSTRACT

The LATE ELONGATED HYPOCOTYL (LHY) transcription factor functions as part of the oscillatory mechanism of the Arabidopsis circadian clock. This paper reports the genome-wide analysis of its binding targets and reveals a role in the control of abscisic acid (ABA) biosynthesis and downstream responses. LHY directly repressed expression of 9-cis-epoxycarotenoid dioxygenase enzymes, which catalyse the rate-limiting step of ABA biosynthesis. This suggested a mechanism for the circadian control of ABA accumulation in wild-type plants. Consistent with this hypothesis, ABA accumulated rhythmically in wild-type plants, peaking in the evening. LHY-overexpressing plants had reduced levels of ABA under drought stress, whereas loss-of-function mutants exhibited an altered rhythm of ABA accumulation. LHY also bound the promoter of multiple components of ABA signalling pathways, suggesting that it may also act to regulate responses downstream of the hormone. LHY promoted expression of ABA-responsive genes responsible for increased tolerance to drought and osmotic stress but alleviated the inhibitory effect of ABA on seed germination and plant growth. This study reveals a complex interaction between the circadian clock and ABA pathways, which is likely to make an important contribution to plant performance under drought and osmotic stress conditions.


Subject(s)
Abscisic Acid/biosynthesis , Arabidopsis/genetics , Arabidopsis/metabolism , Biosynthetic Pathways , Circadian Rhythm , DNA-Binding Proteins/metabolism , Genome, Plant , Signal Transduction , Transcription Factors/metabolism , Abscisic Acid/pharmacology , Arabidopsis/drug effects , Base Sequence , Binding Sites , Biosynthetic Pathways/drug effects , Circadian Clocks/drug effects , Circadian Clocks/genetics , Circadian Rhythm/drug effects , Circadian Rhythm/genetics , Gene Expression Regulation, Plant/drug effects , Gene Ontology , Promoter Regions, Genetic , Protein Binding/drug effects
15.
Plant Physiol ; 178(2): 753-770, 2018 10.
Article in English | MEDLINE | ID: mdl-30126870

ABSTRACT

In plants, bZIP (basic leucine zipper) transcription factors regulate diverse processes such as development and stress responses. However, few of these transcription factors have been functionally characterized in maize (Zea mays). In this study, we characterized the bZIP transcription factor gene ZmbZIP4 from maize. ZmbZIP4 was differentially expressed in various organs of maize and was induced by high salinity, drought, heat, cold, and abscisic acid treatment in seedlings. A transactivation assay in yeast demonstrated that ZmbZIP4 functioned as a transcriptional activator. A genome-wide screen for ZmbZIP4 targets by immunoprecipitation sequencing revealed that ZmbZIP4 could positively regulate a number of stress response genes, such as ZmLEA2, ZmRD20, ZmRD21, ZmRab18, ZmNHX3, ZmGEA6, and ZmERD, and some abscisic acid synthesis-related genes, including NCED, ABA1, AAO3, and LOS5 In addition, ZmbZIP4 targets some root development-related genes, including ZmLRP1, ZmSCR, ZmIAA8, ZmIAA14, ZmARF2, and ZmARF3, and overexpression of ZmbZIP4 resulted in an increased number of lateral roots, longer primary roots, and an improved root system. Increased abscisic acid synthesis by overexpression of ZmbZIP4 also can increase the plant's ability to resist abiotic stress. Thus, ZmbZIP4 is a positive regulator of plant abiotic stress responses and is involved in root development in maize.


Subject(s)
Abscisic Acid/biosynthesis , Basic-Leucine Zipper Transcription Factors/metabolism , Gene Expression Regulation, Plant , Stress, Physiological , Zea mays/genetics , Basic-Leucine Zipper Transcription Factors/genetics , Cold Temperature , Droughts , Hot Temperature , Plant Roots/enzymology , Plant Roots/genetics , Plant Roots/physiology , Salinity , Seedlings/enzymology , Seedlings/genetics , Seedlings/physiology , Zea mays/growth & development , Zea mays/physiology
16.
Molecules ; 23(8)2018 Jul 31.
Article in English | MEDLINE | ID: mdl-30065188

ABSTRACT

The 'Hongyu' apple is an early ripening apple cultivar and usually used for fresh marketing. Due to the short ripening period, most of the fruit are harvested at the commercial maturity stage for proper marketing distribution and a longer shelf life. Fruit ripening involves delicate changes to its metabolic and physiological traits through well-organized synchronization of several hormones and regulatory steps. A clear understanding of these hormonal alterations is crucial for extending the period from commercial to physiological ripening. This study was intended to clarify the hormonal alterations and anthocyanin biosynthesis process prior to and immediate after, the harvesting of apple fruit considering the commercial maturity stage. Fruits harvested at 120 Days after flowering (DAF) (HY_4th) was considered as commercially ripened, 110 DAF (HY_3rd) as pre-ripening and 120 DAF followed by five days storage at 20 °C (HY_20 °C_5) as post-ripening samples. Three different stages of fruit were used for transcriptome assembly using RNA-Seq. Results revealed 9187 differentially expressed genes (DEGs) in the post-ripening samples, which was comparatively lower (922 DEGs) in the pre-ripening fruits. DEGs were subjected to Gene Ontology analysis and 31 categories were significantly enriched in the groups 'biological process,' 'molecular function' and 'cellular component.' The DEGs were involved in hormonal signaling pathways like ethylene, abscisic acid (ABA), auxin, gibberellin (GA), brassinosteroid (BR) and anthocyanin biosynthesis pathways such as PAL, 4CL, CHI, DFR, F3H, UFGT. Several transcription factors like the MADS-box gene, MYB, bHLH, NAC, WRKY and HSF were differentially expressed between the pre- and post-ripening fruits. Selected DEGs were subjected to gene expression analysis using quantitative RT-PCR (qRT-PCR) and the results were consistent with those of RNA-Seq. Our data suggested that in addition to ethylene, ABA and other hormones also play key roles in regulating apple fruit ripening and may interact with the ethylene signaling process. Additionally, our data provided an exhibition of the expression pattern of genes in the anthocyanin biosynthesis pathway.


Subject(s)
Anthocyanins/biosynthesis , Fruit/genetics , Gene Expression Regulation, Plant , Malus/genetics , Plant Proteins/genetics , Transcriptome , Abscisic Acid/biosynthesis , Abscisic Acid/genetics , Anthocyanins/genetics , Brassinosteroids/biosynthesis , Ethylenes/biosynthesis , Fruit/growth & development , Fruit/metabolism , Gene Expression Profiling , Gene Expression Regulation, Developmental , Gene Ontology , Gibberellins/biosynthesis , Gibberellins/genetics , Indoleacetic Acids/metabolism , Malus/growth & development , Malus/metabolism , Molecular Sequence Annotation , Plant Growth Regulators/biosynthesis , Plant Growth Regulators/genetics , Plant Proteins/metabolism , Transcription Factors/genetics , Transcription Factors/metabolism
17.
Plant Cell Physiol ; 59(8): 1490-1499, 2018 Aug 01.
Article in English | MEDLINE | ID: mdl-29986078

ABSTRACT

The phytohormone ABA mediates many physiological and developmental responses, and its key role in plant water relations has fueled efforts to improve crop water productivity by manipulating ABA responses. ABA's core signaling components are encoded by large gene families, which has hampered functional studies using classical genetic approaches due to redundancy. Chemical approaches can complement genetic approaches and have the advantage of delivering both biological probes and potential agrochemical leads; these benefits have spawned the discovery and design of new chemical modulators of ABA signaling and biosynthesis, which have contributed to the identification of ABA receptors and helped to define PYR1 and related subfamily III receptors as key cellular targets for chemically manipulating water productivity. In this review, we provide an overview of small molecules that have helped dissect both ABA signaling and metabolic pathways. We further discuss how the insights gleaned using ABA probe molecules might be translated to improvements in crop water productivity and future opportunities for development of small molecules that affect ABA metabolism and signaling.


Subject(s)
Abscisic Acid/biosynthesis , Abscisic Acid/metabolism , Arabidopsis Proteins/metabolism , Membrane Transport Proteins/metabolism , Plant Proteins/metabolism , Signal Transduction/physiology
18.
Appl Environ Microbiol ; 84(17)2018 09 01.
Article in English | MEDLINE | ID: mdl-29959241

ABSTRACT

Abscisic acid (ABA) is one of the five classical phytohormones involved in increasing the tolerance of plants for various kinds of stresses caused by abiotic or biotic factors, and it also plays important roles in regulating the activation of innate immune cells and glucose homeostasis in mammals. For these reasons, as a "stress hormone," ABA has recently received attention as a candidate drug for agriculture and biomedical applications, prompting significant development of ABA synthesis. Some plant-pathogenic fungi can synthesize natural ABA. The fungus Botrytis cinerea has been used for biotechnological production of ABA. Identification of the transcription factors (TFs) involved in regulation of ABA biosynthesis in B. cinerea would provide new clues to understand how ABA is synthesized and regulated. In this study, we defined a novel Cys2His2 TF, BcabaR1, that regulates the transcriptional levels of ABA synthase genes (bcaba1, bcaba2, bcaba3, and bcaba4) in an ABA-overproducing mutant, B. cinerea TBC-A. Electrophoretic mobility shift assays revealed that recombinant BcabaR1 can bind specifically to both a 14-nucleotide sequence motif and a 39-nucleotide sequence motif in the promoter region of bcaba1 to -4 genes in vitro A decreased transcriptional level of the bcabaR1 gene in B. cinerea led to significantly decreased ABA production and downregulated transcription of bcaba1 to -4 When bcabaR1 was overexpressed in B. cinerea, ABA production was significantly increased, with upregulated transcription of bcaba1 to -4 Thus, in this study, we found that BcabaR1 acts as a positive regulator of ABA biosynthesis in B. cinereaIMPORTANCE Abscisic acid (ABA) could make a potentially important contribution to theoretical research and applications in agriculture and medicine. Botrytis cinerea is a plant-pathogenic fungus that was found to produce ABA. There has been a view that ABA is related to the interaction between pathogenic fungi and plants. Identification of regulatory genes involved in ABA biosynthesis may facilitate an understanding of the underlying molecular mechanisms of ABA biosynthesis and the pathogenesis of B. cinerea Here, we present a positive regulator, BcabaR1, of ABA biosynthesis in B. cinerea that can affect the transcriptional level of the ABA biosynthesis gene cluster, bcaba1 to -4, by directly binding to the conserved sequence elements in the promoter of the bcaba1 to -4 genes. This TF was found to be specifically involved in regulation of ABA biosynthesis. This work provides new clues for finding other ABA biosynthesis genes and improving ABA yield in B. cinerea.


Subject(s)
Abscisic Acid/biosynthesis , Botrytis/genetics , Botrytis/metabolism , Plant Growth Regulators/biosynthesis , Transcription Factors/metabolism , Multigene Family/genetics , Plant Diseases/microbiology , Transcription Factors/genetics , Transcription, Genetic/genetics , Zinc Fingers/genetics
19.
Sci Rep ; 8(1): 9268, 2018 06 18.
Article in English | MEDLINE | ID: mdl-29915353

ABSTRACT

Plant tolerance to freezing temperatures is governed by endogenous constitutive components and environmental inducing factors. Nitric oxide (NO) is one of the endogenous components that participate in freezing tolerance regulation. A combined metabolomic and transcriptomic characterization of NO-deficient nia1,2noa1-2 mutant plants suggests that NO acts attenuating the production and accumulation of osmoprotective and regulatory metabolites, such as sugars and polyamines, stress-related hormones, such as ABA and jasmonates, and antioxidants, such as anthocyanins and flavonoids. Accordingly, NO-deficient plants are constitutively more freezing tolerant than wild type plants.


Subject(s)
Adaptation, Physiological , Anthocyanins/metabolism , Arabidopsis/physiology , Freezing , Nitric Oxide/metabolism , Osmosis , Plant Growth Regulators/metabolism , Stress, Physiological , Abscisic Acid/biosynthesis , Antioxidants/metabolism , Ascorbic Acid/metabolism , Cyclopentanes/metabolism , Gene Expression Regulation, Plant , Glutathione/metabolism , Glycolysis , Metabolome , Models, Biological , Mutation/genetics , Oxylipins/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Transcriptome/genetics
20.
Plant Physiol ; 177(3): 911-917, 2018 07.
Article in English | MEDLINE | ID: mdl-29735726

ABSTRACT

The hormone abscisic acid (ABA) plays a critical role in enhancing plant survival during water deficit. Recent molecular evidence suggests that ABA is synthesized in the phloem companion cells and guard cells. However, the nature of cell turgor and water status in these two cell types cannot easily account for the rapid, water status-triggered ABA biosynthesis observed in leaves. Here, we utilize the unique foliar anatomies of an angiosperm (Hakea lissosperma) and four conifer species (Saxegothaea conspicua, Podocarpus latifolius, Cephalotaxus harringtonii, and Amentotaxus formosana) in which the mesophyll can be isolated from the vascular tissue to identify the main site of ABA biosynthesis in water-stressed leaves. In all five species tested, considerable ABA biosynthesis occurred in mesophyll tissue that had been separated from vascular tissue. In addition, the removal of the epidermis from the mesophyll in two conifer species had no impact on the observed increase in ABA levels under water deficit. Our results suggest that mesophyll cells are the predominant location of water deficit-triggered ABA biosynthesis in the leaf.


Subject(s)
Abscisic Acid/biosynthesis , Dehydration , Magnoliopsida/metabolism , Mesophyll Cells/metabolism , Plant Leaves/physiology , Tracheophyta/metabolism , Plant Leaves/anatomy & histology , Plant Leaves/cytology
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