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1.
Methods Mol Biol ; 1731: 49-56, 2018.
Article in English | MEDLINE | ID: mdl-29318542

ABSTRACT

Mitochondrial aconitase is a reversible enzyme that catalyzes the conversion of citrate to isocitrate in the tricarboxylic acid cycle. Mitochondrial aconitase is very sensitive to oxidative inactivation and can aggregate and accumulate in the mitochondrial matrix causing mitochondrial dysfunction. Lon protease, one of the major quality control proteases in mitochondria, degrades oxidized aconitase maintaining mitochondrial homeostasis. This chapter describes a step-by-step protocol for a simple and reliable measurement of mitochondrial aconitase, as well as citrate synthase activity, using isolated mitochondria from cells. The protocol is simple and fast, and it is optimized for a 96-well plate using a microplate reader.


Subject(s)
ATP-Dependent Proteases/metabolism , Aconitate Hydratase/analysis , Enzyme Assays/methods , Mitochondrial Proteins/metabolism , Aconitate Hydratase/metabolism , Animals , Cell Line, Tumor , Citrate (si)-Synthase/analysis , Citrate (si)-Synthase/metabolism , Enzyme Assays/instrumentation , Fibroblasts , Mice , Mitochondria/metabolism , Oxidation-Reduction , Oxidative Stress , Primary Cell Culture
2.
Biochim Biophys Acta ; 1862(7): 1309-23, 2016 07.
Article in English | MEDLINE | ID: mdl-27083931

ABSTRACT

Candida albicans is an opportunist pathogen responsible for a large spectrum of infections, from superficial mycosis to the systemic disease candidiasis. Its ability to adopt various morphological forms, such as unicellular yeasts, filamentous pseudohyphae and hyphae, contributes to its ability to survive within the host. It has been suggested that the antioxidant glutathione is involved in the filamentation process. We investigated S-glutathionylation, the reversible binding of glutathione to proteins, and the functional consequences on C. albicans metabolic remodeling during the yeast-to-hyphae transition. Our work provided evidence for the specific glutathionylation of mitochondrial proteins involved in bioenergetics pathways in filamentous forms and a regulation of the main enzyme of the glyoxylate cycle, isocitrate lyase, by glutathionylation. Isocitrate lyase inactivation in the hyphal forms was reversed by glutaredoxin treatment, in agreement with a glutathionylation process, which was confirmed by proteomic data showing the binding of one glutathione molecule to the enzyme (data are available via ProteomeXchange with identifier PXD003685). We also assessed the effect of alternative carbon sources on glutathione levels and isocitrate lyase activity. Changes in nutrient availability led to morphological flexibility and were related to perturbations in glutathione levels and isocitrate lyase activity, confirming the key role of the maintenance of intracellular redox status in the adaptive metabolic strategy of the pathogen.


Subject(s)
Candida albicans/growth & development , Candidiasis/microbiology , Fungal Proteins/metabolism , Glutathione/metabolism , Hyphae/growth & development , Mitochondrial Proteins/metabolism , Aconitate Hydratase/analysis , Aconitate Hydratase/metabolism , Amino Acid Sequence , Candida albicans/chemistry , Candida albicans/enzymology , Candida albicans/metabolism , Fungal Proteins/analysis , Humans , Hyphae/chemistry , Hyphae/enzymology , Hyphae/metabolism , Isocitrate Lyase/analysis , Isocitrate Lyase/metabolism , Malate Synthase/analysis , Malate Synthase/metabolism , Mitochondrial Proteins/analysis , Models, Molecular , Sequence Alignment
3.
Development ; 141(19): 3799-806, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25249465

ABSTRACT

Intracytoplasmic sperm injection (ICSI) has been successfully used to produce offspring in several mammalian species including humans. However, ICSI has not been successful in birds because of the size of the egg and difficulty in mimicking the physiological polyspermy that takes place during normal fertilization. Microsurgical injection of 20 or more spermatozoa into an egg is detrimental to its survival. Here, we report that injection of a single spermatozoon with a small volume of sperm extract (SE) or its components led to the development and birth of healthy quail chicks. SE contains three factors - phospholipase Cζ (PLCZ), aconitate hydratase (AH) and citrate synthase (CS) - all of which are essential for full egg activation and subsequent embryonic development. PLCZ induces an immediate, transient Ca(2+) rise required for the resumption of meiosis. AH and CS are required for long-lasting, spiral-like Ca(2+) oscillations within the activated egg, which are essential for cell cycle progression in early embryos. We also found that co-injection of cRNAs encoding PLCZ, AH and CS support the full development of ICSI-generated zygotes without the use of SE. These findings will aid our understanding of the mechanism of avian fertilization and embryo development, as well as assisting in the manipulation of the avian genome and the production of transgenic and cloned birds.


Subject(s)
Fertilization/physiology , Quail/physiology , Sperm Injections, Intracytoplasmic/veterinary , Spermatozoa/chemistry , Aconitate Hydratase/analysis , Animals , Calcium/metabolism , Chromatography, Liquid , Citrate (si)-Synthase/analysis , Immunoblotting , Male , Microscopy, Fluorescence , Ovum/metabolism , Phosphoinositide Phospholipase C/analysis , Sperm Injections, Intracytoplasmic/methods , Tandem Mass Spectrometry , Treatment Outcome
4.
J Proteome Res ; 13(11): 5008-21, 2014 Nov 07.
Article in English | MEDLINE | ID: mdl-25181601

ABSTRACT

The molecular mechanisms underlying skeletal muscle aging and associated sarcopenia have been linked to an altered oxidative status of redox-sensitive proteins. Reactive oxygen and reactive nitrogen species (ROS/RNS) generated by contracting skeletal muscle are necessary for optimal protein function, signaling, and adaptation. To investigate the redox proteome of aging gastrocnemius muscles from adult and old male mice, we developed a label-free quantitative proteomic approach that includes a differential cysteine labeling step. The approach allows simultaneous identification of up- and downregulated proteins between samples in addition to the identification and relative quantification of the reversible oxidation state of susceptible redox cysteine residues. Results from muscles of adult and old mice indicate significant changes in the content of chaperone, glucose metabolism, and cytoskeletal regulatory proteins, including Protein DJ-1, cAMP-dependent protein kinase type II, 78 kDa glucose regulated protein, and a reduction in the number of redox-responsive proteins identified in muscle of old mice. Results demonstrate skeletal muscle aging causes a reduction in redox-sensitive proteins involved in the generation of precursor metabolites and energy metabolism, indicating a loss in the flexibility of the redox energy response. Data is available via ProteomeXchange with identifier PXD001054.


Subject(s)
Aging/metabolism , Cysteine/chemistry , Muscle Proteins/metabolism , Muscle, Skeletal/physiology , Proteomics/methods , Acetylation , Aconitate Hydratase/analysis , Aconitate Hydratase/metabolism , Amino Acid Sequence , Animals , Blotting, Western , Endoplasmic Reticulum Chaperone BiP , Fructose-Bisphosphate Aldolase/metabolism , Male , Mice, Inbred C57BL , Molecular Sequence Data , Muscle Proteins/analysis , Muscle, Skeletal/metabolism , Oxidation-Reduction , Oxidative Stress , Tandem Mass Spectrometry/methods
5.
Neuromolecular Med ; 16(1): 175-90, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24203394

ABSTRACT

In the present study, we tried to answer the following questions: which kind of defense pathways are activated after Aß insult? How defense systems react against noxious effects of Aß and whether they are able to deal against apoptosis or not? So, we traced some molecular pathways including autophagy, mitophagy, and mitochondrial biogenesis before reaching to the endpoint of apoptosis. Besides, we measured the function of mitochondria after injection of Aß (1-42) in CA1 area of hippocampus as a model of Alzheimer's disease (AD). Based on our data, autophagy markers reached to their maximum level and returned to the control level as apoptotic markers started to increase. As a specialized form of autophagy, mitophagy markers followed the trend of autophagy markers. Whereas mitochondrial dynamic processes shifted toward fission, mitochondrial biogenesis was severely affected by Aß and significantly decreased. Alongside suppression of mitochondrial biogenesis, activity of specific enzymes involved in antioxidant defense system, electron transport chain, and tricarboxylic acid cycle (TCA) decreased in response to the Aß. Activity of antioxidant enzymes increased at first and then decreased significantly compared to the control. TCA enzymes aconitase and malate dehydrogenase activities reduced immediately while citrate synthase and fumarase activities did not change. Based on our finding, monitoring of the master molecules of intracellular cascades and determining their trends before the destructive function of Aß could be the target of therapeutic issues for AD.


Subject(s)
Amyloid beta-Peptides/toxicity , Apoptosis/drug effects , Autophagy/drug effects , CA1 Region, Hippocampal/drug effects , Citric Acid Cycle/drug effects , Mitophagy/drug effects , Neurons/drug effects , Peptide Fragments/toxicity , Aconitate Hydratase/analysis , Animals , CA1 Region, Hippocampal/pathology , Catalase/analysis , Citrate (si)-Synthase/analysis , Cytochromes/analysis , Electron Transport , Enzyme Induction , Fumarate Hydratase/analysis , Glutathione/analysis , Malate Dehydrogenase/analysis , Male , Microinjections , Mitochondria/drug effects , Mitochondria/metabolism , Nerve Tissue Proteins/analysis , Nerve Tissue Proteins/physiology , Neurons/pathology , Protein Kinases/analysis , Rats , Rats, Wistar , Reactive Oxygen Species/metabolism , Superoxide Dismutase/analysis , Time Factors
6.
Gene ; 485(2): 73-80, 2011 Oct 10.
Article in English | MEDLINE | ID: mdl-21723382

ABSTRACT

Ferritin is a storage protein that plays a key role in iron metabolism. In this study, we report on the sequence characterization of a ferritin-coding cDNA in Eisenia andrei earthworms isolated by RT-PCR using degenerated primers, and we suggest the presence of a putative IRE in the 5'-UTR of ferritin mRNA. The obtained ferritin sequence was compared with those of other animals showing sequence and structure homology in consensus sites, including the iron-responsive element (IRE) and ferroxidase centers. Despite the sequence homology in the E. andrei mRNA of ferritin with the sequences of other animals in consensus IRE sites, the presented cytosine in the IRE of E. andrei ferritin in the expected position does not form a conventional bulge. The presence of ferritin in the coelomic fluid of E. andrei was proven by iron staining assay. Moreover, aconitase activity in the coelomic fluid was assessed by aconitase assay, suggesting the presence of an iron regulatory protein. Quantitative analysis revealed changes in the gene expression levels of ferritin in coelomocytes in response to bacterial challenge, reaching the maximum level 8h after the stimulation with both Gram-positive and Gram-negative bacteria.


Subject(s)
Ferritins/chemistry , Ferritins/genetics , Oligochaeta/genetics , Aconitate Hydratase/analysis , Aconitate Hydratase/genetics , Aconitate Hydratase/metabolism , Amino Acid Sequence , Animals , Bacillus subtilis/metabolism , Base Sequence , Ceruloplasmin/genetics , Cloning, Molecular , DNA Primers , DNA, Complementary/biosynthesis , DNA, Complementary/genetics , DNA, Complementary/isolation & purification , Escherichia coli K12/metabolism , Gene Expression Regulation , Molecular Sequence Data , Nucleic Acid Conformation , Oligochaeta/metabolism , RNA/genetics , RNA/isolation & purification , RNA, Messenger/chemistry , RNA, Messenger/genetics , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA
7.
Age (Dordr) ; 33(3): 321-36, 2011 Sep.
Article in English | MEDLINE | ID: mdl-20878490

ABSTRACT

Aging compromises restoration of the cardiac mechanical function during reperfusion. We hypothesized that this was due to an ampler release of mitochondrial reactive oxygen species (ROS). This study aimed at characterising ex vivo the mitochondrial ROS release during reperfusion in isolated perfused hearts of middle-aged rats. Causes and consequences on myocardial function of the observed changes were then evaluated. The hearts of rats aged 10- or 52-week old were subjected to global ischemia followed by reperfusion. Mechanical function was monitored throughout the entire procedure. Activities of the respiratory chain complexes and the ratio of aconitase to fumarase activities were determined before ischemia and at the end of reperfusion. H(2)O(2) release was also evaluated in isolated mitochondria. During ischemia, middle-aged hearts displayed a delayed contracture, suggesting a maintained ATP production but also an increased metabolic proton production. Restoration of the mechanical function during reperfusion was however reduced in the middle-aged hearts, due to lower recovery of the coronary flow associated with higher mitochondrial oxidative stress indicated by the aconitase to fumarase ratio in the cardiac tissues. Surprisingly, activity of the respiratory chain complex II was better maintained in the hearts of middle-aged animals, probably because of an enhanced preservation of its membrane lipid environment. This can explain the higher mitochondrial oxidative stress observed in these conditions, since cardiac mitochondria produce much more H(2)O(2) when they oxidize FADH(2)-linked substrates than when they use NADH-linked substrates. In conclusion, the lower restoration of the cardiac mechanical activity during reperfusion in the middle-aged hearts was due to an impaired recovery of the coronary flow and an insufficient oxygen supply. The deterioration of the coronary perfusion was explained by an increased mitochondrial ROS release related to the preservation of complex II activity during reperfusion.


Subject(s)
Aging/metabolism , Coronary Vessels/physiopathology , Electron Transport Chain Complex Proteins/metabolism , Myocardial Contraction/physiology , Myocardial Reperfusion Injury/metabolism , Reactive Oxygen Species/metabolism , Aconitate Hydratase/analysis , Animals , Disease Models, Animal , Fumarate Hydratase/analysis , Hydrogen Peroxide/metabolism , In Vitro Techniques , Male , Mitochondria, Heart/metabolism , Myocardial Reperfusion Injury/physiopathology , Myocardium/chemistry , Oxidative Stress/physiology , Oxygen/metabolism , Perfusion , Rats , Rats, Wistar
8.
Free Radic Res ; 44(7): 773-82, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20380592

ABSTRACT

This study examined the time-dependent effects of a cell permeable SOD mimetic, MnTMPyP, on mitochondrial function in renal ischemia-reperfusion injury (IRI). Male SD rats were subject to either sham operation or bilateral renal ischemia for 45 min followed by reperfusion for 1, 4 or 24 h. A sub-set of animals was treated with either saline vehicle or 5 mg/Kg of MnTMPyP (i.p.). EPR measurements showed that at 1-h reperfusion MnTMPyP prevented a decrease in aconitase activity (p < 0.05) and attenuated the increase in the high spin heme at g = 6 and oxidation of 4Fe4S to 3Fe4S signal at g = 2.015 (p < 0.01). MnTMPyP was effective in preventing loss of mitochondrial complexes and prevented the loss of cytochrome c and Smac/Diablo from mitochondria early in reperfusion. Following 24 h of reperfusion MnTMPyP was effective in attenuating caspase-3 and blocking apoptosis (p < 0.05). In conclusion, MnTMPyP has biphasic effects in renal IRI, inhibiting mitochondrial dysfunction at the early phases of reperfusion and prevention of apoptosis following longer durations of reperfusion.


Subject(s)
Antioxidants/therapeutic use , Kidney/blood supply , Metalloporphyrins/therapeutic use , Mitochondria/drug effects , Reperfusion Injury/drug therapy , Aconitate Hydratase/analysis , Animals , Antioxidants/pharmacology , Apoptosis/drug effects , Apoptosis Regulatory Proteins , Carrier Proteins/analysis , Caspase 3/analysis , Cytochromes c/analysis , Drug Evaluation, Preclinical , Electron Spin Resonance Spectroscopy , Heme/analysis , In Situ Nick-End Labeling , Male , Metalloporphyrins/pharmacology , Mitochondria/physiology , Mitochondrial Proteins/analysis , Oxidation-Reduction , Oxidative Stress/drug effects , Rats , Rats, Sprague-Dawley , Reactive Oxygen Species/metabolism , Reperfusion Injury/metabolism , Superoxide Dismutase/analysis , Time Factors
9.
Epilepsia ; 49(1): 40-50, 2008 Jan.
Article in English | MEDLINE | ID: mdl-17822430

ABSTRACT

PURPOSE: In patients with mesial temporal lobe epilepsy (MTLE) it remains an unresolved issue whether the interictal decrease in N-acetyl aspartate (NAA) detected by proton magnetic resonance spectroscopy ((1)H-MRS) reflects the epilepsy-associated loss of hippocampal pyramidal neurons or metabolic dysfunction. METHODS: To address this problem, we applied high-resolution (1)H-MRS at 14.1 Tesla to measure metabolite concentrations in ex vivo tissue slices from three hippocampal subfields (CA1, CA3, dentate gyrus) as well as from the parahippocampal region of 12 patients with MTLE. RESULTS: In contrast to four patients with lesion-caused MTLE, we found a large variance of NAA concentrations in the individual hippocampal regions of patients with Ammon's horn sclerosis (AHS). Specifically, in subfield CA3 of AHS patients despite of a moderate preservation of neuronal cell densities the concentration of NAA was significantly lowered, while the concentrations of lactate, glucose, and succinate were elevated. We suggest that these subfield-specific alterations of metabolite concentrations in AHS are very likely caused by impairment of mitochondrial function and not related to neuronal cell loss. CONCLUSIONS: A subfield-specific impairment of energy metabolism is the probable cause for lowered NAA concentrations in sclerotic hippocampi of MTLE patients.


Subject(s)
Aspartic Acid/analogs & derivatives , Epilepsy, Temporal Lobe/metabolism , Hippocampus/chemistry , Aconitate Hydratase/analysis , Adult , Aged , Aspartic Acid/analysis , Aspartic Acid/metabolism , Cell Count , Electroencephalography/statistics & numerical data , Epilepsy, Temporal Lobe/pathology , Epilepsy, Temporal Lobe/surgery , Female , Glucose/analysis , Glucose/metabolism , Hippocampus/metabolism , Hippocampus/pathology , Humans , Lactates/analysis , Lactates/metabolism , Magnetic Resonance Imaging/statistics & numerical data , Magnetic Resonance Spectroscopy/statistics & numerical data , Male , Middle Aged , Mitochondria/enzymology , Mitochondrial Diseases/metabolism , Mitochondrial Diseases/pathology , Parahippocampal Gyrus/chemistry , Parahippocampal Gyrus/metabolism , Parahippocampal Gyrus/pathology , Preoperative Care , Pyramidal Cells/chemistry , Pyramidal Cells/metabolism , Pyramidal Cells/pathology , Sclerosis , Succinates/analysis , Succinates/metabolism
10.
Mol Microbiol ; 65(2): 521-37, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17630978

ABSTRACT

Zinc is an essential metal that, when in excess, can be deleterious to the cell. Therefore, homeostatic mechanisms for this cation must be finely tuned. To better understand the response of yeast in front of an excess of zinc, we screened a systematic deletion mutant library for altered growth in the presence of 6 mM zinc. Eighty-nine mutants exhibited increased zinc sensitivity, including many genes involved in vacuolar assembling and biogenesis. Interestingly, a mutant lacking the Aft1 transcription factor, required for the transcriptional response to iron starvation, was found to be highly sensitive to zinc. Genome-wide transcriptional profiling revealed that exposure to 5 mM ZnCl(2) results in rapid increase in the expression of numerous chaperones required for proper protein folding or targeting to vacuole and mitochondria, as well as genes involved in stress response (mainly oxidative), sulphur metabolism and some components of the iron regulon. The effect of the lack of Aft1 both in the absence and in the presence of zinc overload was also investigated. Exposure to high zinc generated reactive oxygen species and markedly decreased glutathione content. Interestingly, zinc excess results in decreased intracellular iron content and aconitase and cytochrome c activities in stationary-phase cultures. These findings suggest that high zinc levels may alter the assembly and/or function of iron-sulphur-containing proteins, as well as the biosynthesis of haem groups, thus establishing a link between zinc, iron and sulphur metabolism.


Subject(s)
Iron/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/drug effects , Zinc/toxicity , Aconitate Hydratase/analysis , Aconitate Hydratase/metabolism , Chlorides/pharmacology , Cytochromes c/metabolism , Gene Expression Profiling , Genes, Fungal , Genome, Fungal , Glutathione/metabolism , Homeostasis/genetics , Iron-Sulfur Proteins/genetics , Iron-Sulfur Proteins/metabolism , Oxidative Stress , Reactive Oxygen Species/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae Proteins/genetics , Transcription Factors/genetics , Transcription, Genetic , Zinc/metabolism , Zinc Compounds/pharmacology
11.
J Bacteriol ; 188(21): 7551-61, 2006 Nov.
Article in English | MEDLINE | ID: mdl-16936042

ABSTRACT

A system for the controlled expression of genes in Azotobacter vinelandii by using genomic fusions to the sucrose catabolic regulon was developed. This system was used for the functional analysis of the A. vinelandii isc genes, whose products are involved in the maturation of [Fe-S] proteins. For this analysis, the scrX gene, contained within the sucrose catabolic regulon, was replaced by the contiguous A. vinelandii iscS, iscU, iscA, hscB, hscA, fdx, and iscX genes, resulting in duplicate genomic copies of these genes: one whose expression is directed by the normal isc regulatory elements (Pisc) and the other whose expression is directed by the scrX promoter (PscrX). Functional analysis of [Fe-S] protein maturation components was achieved by placing a mutation within a particular Pisc-controlled gene with subsequent repression of the corresponding PscrX-controlled component by growth on glucose as the carbon source. This experimental strategy was used to show that IscS, IscU, HscBA, and Fdx are essential in A. vinelandii and that their depletion results in a deficiency in the maturation of aconitase, an enzyme that requires a [4Fe-4S] cluster for its catalytic activity. Depletion of IscA results in a null growth phenotype only when cells are cultured under conditions of elevated oxygen, marking the first null phenotype associated with the loss of a bacterial IscA-type protein. Furthermore, the null growth phenotype of cells depleted of HscBA could be partially reversed by culturing cells under conditions of low oxygen. Conserved amino acid residues within IscS, IscU, and IscA that are essential for their respective functions and/or whose replacement results in a partial or complete dominant-negative growth phenotype were also identified using this system.


Subject(s)
Azotobacter vinelandii/metabolism , Bacterial Proteins/physiology , Genes, Bacterial , Iron-Sulfur Proteins/biosynthesis , Aconitate Hydratase/analysis , Aerobiosis , Artificial Gene Fusion , Azotobacter vinelandii/genetics , Azotobacter vinelandii/growth & development , Bacterial Proteins/genetics , Conserved Sequence , Gene Deletion , Gene Duplication , Gene Expression Regulation, Bacterial , Genes, Essential , Glucose/metabolism , Multigene Family , Mutation , Oxygen/metabolism
12.
Mol Cancer ; 5: 14, 2006 Apr 04.
Article in English | MEDLINE | ID: mdl-16595004

ABSTRACT

BACKGROUND: In prostate cancer, normal citrate-producing glandular secretory epithelial cells undergo a metabolic transformation to malignant citrate-oxidizing cells. m-Aconitase is the critical step involved in this altered citrate metabolism that is essential to prostate malignancy. The limiting m-aconitase activity in prostate epithelial cells could be the result of a decreased level of m-aconitase enzyme and/or the inhibition of existing m-aconitase. Earlier studies identified zinc as an inhibitor of m-aconitase activity in prostate cells; and that the depletion of zinc in malignant cells is an important factor in this metabolic transformation. However, a possibility remains that an altered expression and level of m-aconitase enzyme might also be involved in this metabolic transformation. To address this issue, the in situ level of m-aconitase enzyme was determined by immunohistochemical analysis of prostate cancer tissue sections and malignant prostate cell lines. RESULTS: The immunocytochemical procedure successfully identified the presence of m-aconitase localized in the mitochondrial compartment in PC-3, LNCaP, and DU-145 malignant prostate cell lines. The examination of prostate tissue sections from prostate cancer subjects demonstrated that m-aconitase enzyme is present in the glandular epithelium of normal glands, hyperplastic glands, adenocrcinomatous glands, and prostatic intraepithelial neoplastic foci. Quantitative analysis of the relative level of m-aconitase in the glandular epithelium of citrate-producing adenomatous glands versus the citrate-oxidizing adenocarcinomatous glands revealed no significant difference in m-aconitase enzyme levels. This is in contrast to the down-regulation of ZIP1 zinc transporter in the malignant glands versus hyperplastic glands that exists in the same tissue samples. CONCLUSION: The results demonstrate the existence of m-aconitase enzyme in the citrate-producing glandular epithelial cells; so that deficient m-aconitase enzyme is not associated with the limiting m-aconitase activity that prevents citrate oxidation in these cells. The level of m-aconitase is maintained in the malignant cells; so that an altered enzyme level is not associated with the increased m-aconitase activity. Consequently, the elevated zinc level that inhibits m-aconitase enzyme is responsible for the impaired citrate oxidation in normal and hyperplastic prostate glandular epithelial cells. Moreover, the down-regulation of ZIP1 zinc transporter and corresponding depletion of zinc results in the increase in the activity of the existing m-aconitase activity in the malignant prostate cells. The studies now define the mechanism for the metabolic transformation that characterizes the essential transition of normal citrate-producing epithelial cells to malignant citrate-oxidizing cells.


Subject(s)
Aconitate Hydratase/metabolism , Citric Acid/metabolism , Mitochondria/enzymology , Prostate/enzymology , Prostatic Neoplasms/enzymology , Aconitate Hydratase/analysis , Cell Line, Tumor , Humans , Male
13.
Prostate ; 66(10): 1061-9, 2006 Jul 01.
Article in English | MEDLINE | ID: mdl-16598741

ABSTRACT

BACKGROUND: Mitochondrial (m) aconitase plays an important role in the unique pathway of citrate accumulation in prostate epithelial cells through its limited activity. In the current study, we characterized the human m-aconitase gene promoter. METHODS: A 1,411-bp 5'-flanking fragment of the human m-aconitase gene was cloned, followed by 5' serial deletion analysis of promoter activity. Transcriptional start sties and transcription factors bound to the promoter were identified by 5' RACE, DNA pull-down assay and transcription factor array analysis. RESULTS: Two transcriptional start sites were identified. The promoter fragment pulled down 15 transcription factors, some without consensus sequences in the promoter. Deletion of one Sp1 site eliminated all promoter activity. CONCLUSIONS: The m-aconitase promoter is contained in a 153-bp 5' fragment lacking a TATA or CAAT sequence. Sp1 binding to a specific Sp1 site is required for promoter activity while other transcription factors are recruited through protein-protein interactions.


Subject(s)
Aconitate Hydratase/genetics , Mitochondria/enzymology , Promoter Regions, Genetic/genetics , Transcription Factors/genetics , Aconitate Hydratase/analysis , Aconitate Hydratase/physiology , Base Sequence , CCAAT-Binding Factor/genetics , CCAAT-Binding Factor/physiology , Cell Line, Tumor , DNA/analysis , DNA/genetics , Epithelium/enzymology , Gene Expression Regulation , Humans , Male , Molecular Sequence Data , Oligonucleotide Array Sequence Analysis , Promoter Regions, Genetic/physiology , Prostate/enzymology , Protein Binding/genetics , Protein Binding/physiology , Sp1 Transcription Factor/analysis , Sp1 Transcription Factor/genetics , Sp1 Transcription Factor/physiology , TATA-Box Binding Protein/genetics , TATA-Box Binding Protein/physiology , Transcription Factors/analysis , Transcription Factors/physiology , Transcription, Genetic/genetics , Transcription, Genetic/physiology
14.
Microbiology (Reading) ; 152(Pt 4): 1119-1128, 2006 Apr.
Article in English | MEDLINE | ID: mdl-16549675

ABSTRACT

The NADP(H)-dependent enzymes glucose-6-phosphate dehydrogenase (G6PDH) and ferredoxin(flavodoxin)-NADP(H) reductase (FPR), encoded by the zwf and fpr genes, respectively, are committed members of the soxRS regulatory system involved in superoxide resistance in Escherichia coli. Exposure of E. coli cells to the superoxide propagator methyl viologen (MV) led to rapid accumulation of G6PDH, while FPR was induced after a lag period of several minutes. Bacteria expressing G6PDH from a multicopy plasmid accumulated higher NADPH levels and displayed a protracted soxRS response, whereas FPR build-up had the opposite effects. Inactivation of either of the two genes resulted in enhanced sensitivity to MV killing, while further increases in the cellular content of FPR led to higher survival rates under oxidative conditions. In contrast, G6PDH accumulation over wild-type levels of expression failed to increase MV tolerance. G6PDH and FPR could act concertedly to deliver reducing equivalents from carbohydrates, via NADP(+), to the FPR acceptors ferredoxin and/or flavodoxin. To evaluate whether this electron-transport system could mediate reductive repair reactions, the pathway was reconstituted in vitro from purified components; the reconstituted system was found to be functional in reactivation of oxidatively damaged iron-sulfur clusters of hydro-lyases such as aconitase and 6-phosphogluconate dehydratase. Recovery of these activities after oxidative challenge was faster and more extensive in transformed bacteria overexpressing FPR than in wild-type cells, indicating that the reductase could sustain hydro-lyase repair in vivo. However, FPR-deficient mutants were still able to fix iron-sulfur clusters at significant rates, suggesting that back-up routes for ferredoxin and/or flavodoxin reduction might be called into action to rescue inactivated enzymes when FPR is absent.


Subject(s)
Bacterial Proteins/physiology , Escherichia coli Proteins/physiology , Escherichia coli/physiology , Ferredoxin-NADP Reductase/physiology , Glucosephosphate Dehydrogenase/physiology , Oxidative Stress , Trans-Activators/physiology , Transcription Factors/physiology , Aconitate Hydratase/analysis , Adaptation, Physiological , Artificial Gene Fusion , Electron Transport , Escherichia coli/enzymology , Ferredoxins/metabolism , Flavodoxin/metabolism , Gene Deletion , Gene Expression Regulation, Bacterial , Genes, Reporter , Hydro-Lyases/analysis , Mutagenesis, Insertional , Paraquat , Regulon , Superoxides/metabolism , Superoxides/toxicity , beta-Galactosidase/analysis , beta-Galactosidase/genetics
15.
J Bacteriol ; 187(9): 2967-73, 2005 May.
Article in English | MEDLINE | ID: mdl-15838022

ABSTRACT

Staphylococcal polysaccharide intercellular adhesin (PIA) is important for the development of a mature biofilm. PIA production is increased during growth in a nutrient-replete or iron-limited medium and under conditions of low oxygen availability. Additionally, stress-inducing stimuli such as heat, ethanol, and high concentrations of salt increase the production of PIA. These same environmental conditions are known to repress tricarboxylic acid (TCA) cycle activity, leading us to hypothesize that altering TCA cycle activity would affect PIA production. Culturing Staphylococcus epidermidis with a low concentration of the TCA cycle inhibitor fluorocitrate dramatically increased PIA production without impairing glucose catabolism, the growth rate, or the growth yields. These data lead us to speculate that one mechanism by which staphylococci perceive external environmental change is through alterations in TCA cycle activity leading to changes in the intracellular levels of biosynthetic intermediates, ATP, or the redox status of the cell. These changes in the metabolic status of the bacteria result in the attenuation or augmentation of PIA production.


Subject(s)
Citric Acid Cycle , Polysaccharides, Bacterial/biosynthesis , Staphylococcus epidermidis/metabolism , Acetic Acid/metabolism , Aconitate Hydratase/analysis , Adaptation, Physiological , Biomass , Citrates/pharmacology , Citric Acid Cycle/drug effects , Gene Expression Regulation, Bacterial , Glucose/metabolism , Isocitrate Dehydrogenase/analysis , NAD/analysis , Oxidation-Reduction , Staphylococcus epidermidis/drug effects , Staphylococcus epidermidis/growth & development
16.
Eur J Biochem ; 271(18): 3646-56, 2004 Sep.
Article in English | MEDLINE | ID: mdl-15355341

ABSTRACT

Three pairs of parental (rho+) and established mitochondrial DNA depleted (rho0) cells, derived from bone, lung and muscle were used to verify the influence of the nuclear background and the lack of efficient mitochondrial respiratory chain on antioxidant defences and homeostasis of intracellular reactive oxygen species (ROS). Mitochondrial DNA depletion significantly lowered glutathione reductase activity, glutathione (GSH) content, and consistently altered the GSH2 : oxidized glutathione ratio in all of the rho0 cell lines, albeit to differing extents, indicating the most oxidized redox state in bone rho0 cells. Activity, as well as gene expression and protein content, of superoxide dismutase showed a decrease in bone and muscle rho0 cell lines but not in lung rho0 cells. GSH peroxidase activity was four times higher in all three rho0 cell lines in comparison to the parental rho+, suggesting that this may be a necessary adaptation for survival without a functional respiratory chain. Taken together, these data suggest that the lack of respiratory chain prompts the cells to reduce their need for antioxidant defences in a tissue-specific manner, exposing them to a major risk of oxidative injury. In fact bone-derived rho0 cells displayed the highest steady-state level of intracellular ROS (measured directly by 2',7'-dichlorofluorescin, or indirectly by aconitase activity) compared to all the other rho+ and rho0 cells, both in the presence or absence of glucose. Analysis of mitochondrial and cytosolic/iron regulatory protein-1 aconitase indicated that most ROS of bone rho0 cells originate from sources other than mitochondria.


Subject(s)
Antioxidants/metabolism , DNA, Mitochondrial/metabolism , Reactive Oxygen Species/metabolism , Aconitate Hydratase/analysis , Aconitate Hydratase/metabolism , Blotting, Western , Carcinoma/metabolism , Catalase/analysis , Catalase/metabolism , Cell Line, Tumor , Glutathione/analysis , Glutathione/metabolism , Glutathione Peroxidase/analysis , Glutathione Peroxidase/metabolism , Glutathione Reductase/analysis , Glutathione Reductase/metabolism , Glutathione Transferase/analysis , Glutathione Transferase/metabolism , Homeostasis , Humans , Lung Neoplasms/metabolism , Osteosarcoma/metabolism , Rhabdomyosarcoma/metabolism , Subcellular Fractions/enzymology , Superoxide Dismutase/analysis , Superoxide Dismutase/metabolism
18.
Cell Mol Biol Lett ; 9(4A): 651-64, 2004.
Article in English | MEDLINE | ID: mdl-15647788

ABSTRACT

Iron regulatory protein 1 (IRP1) post-transcriptionally regulates the expression of proteins involved in the iron metabolism of mammals. IRP1 is a bifunctional cytosolic protein which can exhibit aconitase activity or bind to iron responsive element (IREs) in the untranslated regions of specific mRNAs. The modulation of IRP1 activities and its consequence for intracellular iron homeostasis is best characterized in rodents and humans. Little is known about IRP1 in farm animals. In this study, we analyzed the two activities of IRP1 in the livers of four farm animal species (cattle, goat, pig and rabbit) and their relationship to hepatic iron content. We found an inverse correlation between spontaneous IRP1 IRE binding activity and non-haem iron content in the liver. Using the electrophoretic mobility shift assay, we showed differential mobility of IRE/IRP1 complexes formed with hepatic cytosolic extracts from various farm animal species. We discuss this observation in relation to a comparative analysis of mammalian IRP1 amino acid sequences.


Subject(s)
Animals, Domestic/metabolism , Iron Regulatory Protein 1/metabolism , Iron/metabolism , Liver/metabolism , Aconitate Hydratase/analysis , Aconitate Hydratase/metabolism , Amino Acid Sequence , Animals , Cattle , Electrophoretic Mobility Shift Assay , Iron/analysis , Liver/chemistry , Liver/enzymology , Mice , Molecular Sequence Data , Rabbits , Response Elements/genetics , Sequence Homology, Amino Acid , Untranslated Regions/metabolism
19.
Electrophoresis ; 21(13): 2651-9, 2000 Jul.
Article in English | MEDLINE | ID: mdl-10949142

ABSTRACT

We have previously reported the usefulness of two-dimensional gel electrophoresis followed by Western blotting with sera from patients with systemic candidiasis in the detection of the major Candida albicans antigens (Pitarch et al., Electrophoresis 1999, 20, 1001-1010). The identification of these antigens would be useful for the characterization of good markers for the disease, and for the development of efficient diagnostic strategies. In this work we have used nanoelectrospray tandem mass spectrometry to obtain amino acid sequence information from the immunogenic proteins previously detected. We report here the cross-species identification of these antigens by matching of tandem mass spectrometry data to Saccharomyces cerevisiae proteins. Using this approach, we unambiguously identified the four C. albicans immunogenic proteins analyzed, namely aconitase, pyruvate kinase, phosphoglycerate mutase and methionine synthase. Furthermore, we report for the first time that aconitase, methionine synthase and phosphoglycerate mutase have antigenic properties in C. albicans.


Subject(s)
Antigens, Fungal/immunology , Candida albicans/immunology , Electrophoresis, Gel, Two-Dimensional/methods , Fungal Proteins/immunology , Saccharomyces cerevisiae/immunology , Spectrometry, Mass, Electrospray Ionization/methods , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , 5-Methyltetrahydrofolate-Homocysteine S-Methyltransferase/analysis , 5-Methyltetrahydrofolate-Homocysteine S-Methyltransferase/immunology , Aconitate Hydratase/analysis , Aconitate Hydratase/immunology , Amino Acid Sequence , Antigens, Fungal/analysis , Candida albicans/chemistry , Databases, Factual , Fungal Proteins/analysis , Molecular Sequence Data , Phosphoglycerate Mutase/analysis , Phosphoglycerate Mutase/immunology , Pyruvate Kinase/analysis , Pyruvate Kinase/immunology , Saccharomyces cerevisiae/chemistry , Sequence Alignment , Sequence Homology, Amino Acid , Species Specificity
20.
J Bacteriol ; 182(14): 3896-903, 2000 Jul.
Article in English | MEDLINE | ID: mdl-10869064

ABSTRACT

The metabolic consequences of two insertions, iscR1::MudJ and iscA2::MudJ, in the isc gene cluster of Salmonella enterica serovar Typhimurium were studied. Each of these insertions had polar effects and caused a nutritional requirement for the thiazole moiety of thiamine. Data showed that IscS was required for the synthesis of nicotinic acid and the thiazole moiety of thiamine and that one or more additional isc gene products were required for a distinct step in the thiazole biosynthetic pathway. Strains with isc lesions had reduced succinate dehydrogenase and aconitase activities. Furthermore, isc mutants accumulated increased levels of pyruvate in the growth medium in response to exogenously added iron (FeCl(3)), and this response required a functional ferric uptake regulator, Fur.


Subject(s)
Genes, Bacterial , Multigene Family , Salmonella typhimurium/genetics , Thiamine/biosynthesis , Aconitate Hydratase/analysis , Bacterial Proteins/genetics , Carbon-Sulfur Lyases/genetics , Chlorides , Culture Media/chemistry , Ferric Compounds/metabolism , Genes, Regulator , Iron/metabolism , Iron-Sulfur Proteins/genetics , Mutagenesis, Insertional , Niacin/biosynthesis , Phosphotransferases (Alcohol Group Acceptor)/genetics , Pyruvic Acid/metabolism , Repressor Proteins/genetics , Salmonella typhimurium/enzymology , Serotyping , Succinate Dehydrogenase/analysis , Thiazoles/metabolism
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