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1.
PLoS Genet ; 19(9): e1010974, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37773959

ABSTRACT

Adenylosuccinate lyase deficiency is an ultrarare congenital metabolic disorder associated with muscle weakness and neurobehavioral dysfunction. Adenylosuccinate lyase is required for de novo purine biosynthesis, acting twice in the pathway at non-sequential steps. Genetic models can contribute to our understanding of the etiology of disease phenotypes and pave the way for development of therapeutic treatments. Here, we establish the first model to specifically study neurobehavioral aspects of adenylosuccinate lyase deficiency. We show that reduction of adsl-1 function in C. elegans is associated with a novel learning phenotype in a gustatory plasticity assay. The animals maintain capacity for gustatory plasticity, evidenced by a change in their behavior in response to cue pairing. However, their behavioral output is distinct from that of control animals. We link substrate accumulation that occurs upon adsl-1 deficiency to an unexpected perturbation in tyrosine metabolism and show that a lack of tyramine mediates the behavioral changes through action on the metabotropic TYRA-2 tyramine receptor. Our studies reveal a potential for wider metabolic perturbations, beyond biosynthesis of purines, to impact behavior under conditions of adenylosuccinate lyase deficiency.


Subject(s)
Adenylosuccinate Lyase , Adenylosuccinate Lyase/deficiency , Autistic Disorder , Caenorhabditis elegans Proteins , Purine-Pyrimidine Metabolism, Inborn Errors , Receptors, Biogenic Amine , Animals , Caenorhabditis elegans/genetics , Caenorhabditis elegans/metabolism , Adenylosuccinate Lyase/genetics , Adenylosuccinate Lyase/metabolism , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Caenorhabditis elegans Proteins/genetics
2.
Elife ; 112022 02 08.
Article in English | MEDLINE | ID: mdl-35133277

ABSTRACT

Adenylosuccinate lyase (ADSL) functions in de novo purine synthesis (DNPS) and the purine nucleotide cycle. ADSL deficiency (ADSLD) causes numerous neurodevelopmental pathologies, including microcephaly and autism spectrum disorder. ADSLD patients have normal serum purine nucleotide levels but exhibit accumulation of dephosphorylated ADSL substrates, S-Ado, and SAICAr, the latter being implicated in neurotoxic effects through unknown mechanisms. We examined the phenotypic effects of ADSL depletion in human cells and their relation to phenotypic outcomes. Using specific interventions to compensate for reduced purine levels or modulate SAICAr accumulation, we found that diminished AMP levels resulted in increased DNA damage signaling and cell cycle delays, while primary ciliogenesis was impaired specifically by loss of ADSL or administration of SAICAr. ADSL-deficient chicken and zebrafish embryos displayed impaired neurogenesis and microcephaly. Neuroprogenitor attrition in zebrafish embryos was rescued by pharmacological inhibition of DNPS, but not increased nucleotide concentration. Zebrafish also displayed phenotypes commonly linked to ciliopathies. Our results suggest that both reduced purine levels and impaired DNPS contribute to neurodevelopmental pathology in ADSLD and that defective ciliogenesis may influence the ADSLD phenotypic spectrum.


Subject(s)
Adenylosuccinate Lyase/deficiency , Adenylosuccinate Lyase/metabolism , Autistic Disorder/metabolism , Neurogenesis , Purine-Pyrimidine Metabolism, Inborn Errors/metabolism , Aminoimidazole Carboxamide/analogs & derivatives , Aminoimidazole Carboxamide/metabolism , Animals , Autism Spectrum Disorder/metabolism , Cell Cycle , Cell Cycle Proteins/metabolism , Cell Line , Chickens/metabolism , Ciliopathies/metabolism , DNA Damage , Humans , Microcephaly/metabolism , Microtubule-Associated Proteins/metabolism , Phenotype , Phosphoproteins/metabolism , Purines/metabolism , Ribonucleotides/metabolism , Zebrafish/metabolism
3.
Mol Genet Metab ; 136(3): 190-198, 2022 07.
Article in English | MEDLINE | ID: mdl-34998670

ABSTRACT

Purines are essential molecules that are components of vital biomolecules, such as nucleic acids, coenzymes, signaling molecules, as well as energy transfer molecules. The de novo biosynthesis pathway starts from phosphoribosylpyrophosphate (PRPP) and eventually leads to the synthesis of inosine monophosphate (IMP) by means of 10 sequential steps catalyzed by six different enzymes, three of which are bi-or tri-functional in nature. IMP is then converted into guanosine monophosphate (GMP) or adenosine monophosphate (AMP), which are further phosphorylated into nucleoside di- or tri-phosphates, such as GDP, GTP, ADP and ATP. This review provides an overview of inborn errors of metabolism pertaining to purine synthesis in humans, including either phosphoribosylpyrophosphate synthetase (PRS) overactivity or deficiency, as well as adenylosuccinate lyase (ADSL), 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (ATIC), phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS), and adenylosuccinate synthetase (ADSS) deficiencies. ITPase deficiency is being described as well. The clinical spectrum of these disorders is broad, including neurological impairment, such as psychomotor retardation, epilepsy, hypotonia, or microcephaly; sensory involvement, such as deafness and visual disturbances; multiple malformations, as well as muscle presentations or consequences of hyperuricemia, such as gouty arthritis or kidney stones. Clinical signs are often nonspecific and, thus, overlooked. It is to be hoped that this is likely to be gradually overcome by using sensitive biochemical investigations and next-generation sequencing technologies.


Subject(s)
Adenylosuccinate Lyase , Purine-Pyrimidine Metabolism, Inborn Errors , Adenylosuccinate Lyase/deficiency , Adenylosuccinate Lyase/genetics , Adenylosuccinate Lyase/metabolism , Autistic Disorder , Humans , Inosine Monophosphate , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Purine-Pyrimidine Metabolism, Inborn Errors/metabolism , Purines
4.
Orphanet J Rare Dis ; 16(1): 112, 2021 03 01.
Article in English | MEDLINE | ID: mdl-33648541

ABSTRACT

BACKGROUND: Adenylosuccinate lyase deficiency (ADSLD) is an ultrarare neurometabolic recessive disorder caused by loss-of-function mutations in the ADSL gene. The disease is characterized by wide clinical variability. Here we provide an updated clinical profiling of the disorder and discuss genotype-phenotype correlations. RESULTS: Data were collected through "Our Journey with ADSL deficiency Association" by using a dedicated web survey filled-in by parents. Clinical and molecular data were collected from 18 patients (12 males, median age 10.9 years ± 7.3), from 13 unrelated families. The age at onset ranged from birth to the first three years (median age 0.63 years ± 0.84 SD), and age at diagnosis varied from 2 months to 17 years, (median age 6.4 years ± 6.1 SD). The first sign was a psychomotor delay in 8/18 patients, epilepsy in 3/18, psychomotor delay and epilepsy in 3/18, and apneas, hypotonia, nystagmus in single cases. One patient (sibling of a previously diagnosed child) had a presymptomatic diagnosis. The diagnosis was made by exome sequencing in 7/18 patients. All patients were definitively diagnosed with ADSL deficiency based on pathogenic variants and/or biochemical assessment. One patient had a fatal neonatal form of ADSL deficiency, seven showed features fitting type I, and nine were characterized by a milder condition (type II), with two showing a very mild phenotype. Eighteen different variants were distributed along the entire ADSL coding sequence and were predicted to have a variable structural impact by impairing proper homotetramerization or catalytic activity of the enzyme. Six variants had not previously been reported. All but two variants were missense. CONCLUSIONS: The study adds more details on the spectrum of ADSLD patients' phenotypes and molecular data.


Subject(s)
Adenylosuccinate Lyase , Autistic Disorder , Purine-Pyrimidine Metabolism, Inborn Errors , Adenylosuccinate Lyase/deficiency , Adenylosuccinate Lyase/genetics , Adolescent , Child , Child, Preschool , Female , Humans , Infant , Infant, Newborn , Male , Phenotype , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Purine-Pyrimidine Metabolism, Inborn Errors/genetics
6.
Indian J Pediatr ; 88(3): 263-265, 2021 03.
Article in English | MEDLINE | ID: mdl-32681428

ABSTRACT

Adenylosuccinate lyase deficiency is a rare inherited disorder of purine metabolism causing severe neurological impairment ranging from early-onset neonatal epileptic encephalopathy to progressive psychomotor retardation and autism in later life. Diagnostic workup involves the measurement of toxic succinyl purines in body fluids and gene sequencing. The authors describe a 13-mo-old girl with compound heterozygous variants in the ADSL gene, presenting as early-onset seizures, severe neurological impairment, development delay, and hypotonia. Neuroimaging revealed cerebral atrophy, delayed myelination and diffusion restriction in bilateral basal ganglia, thalamus and periventricular white matter. The present case highlights ADSL deficiency as a rare cause of metabolic epilepsy that needs timely recognition and prevention of unnecessary investigations.


Subject(s)
Adenylosuccinate Lyase , Autistic Disorder , Epilepsy , Purine-Pyrimidine Metabolism, Inborn Errors , Adenylosuccinate Lyase/deficiency , Epilepsy/diagnosis , Epilepsy/etiology , Female , Humans , Infant , Infant, Newborn , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Purine-Pyrimidine Metabolism, Inborn Errors/genetics
7.
Eur J Med Genet ; 63(12): 104061, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32890691

ABSTRACT

Adenylosuccinate lyase deficiency is a rare autosomal recessive disorder of purine metabolism. The disorder manifests with developmental delay, postnatal microcephaly, hypotonia, involuntary movements, epileptic seizures, ataxia and autistic features. Paroxysmal non-epileptic motor events are not a typical presentation of the disease. We describe an 8-year-old boy who presented with an infantile onset of prolonged episodes of multifocal sustained myoclonic tremor lasting from minutes to days on a background of global developmental delay and gait ataxia. Ictal EEG during these episodes was normal. Ictal surface EMG of the involved upper limb showed a muscular activation pattern consistent with cortical myoclonus. Brain MRI showed mild cerebral atrophy. Whole exome sequencing revealed a novel homozygous variant in the ADSL gene: c.1027G > A; p. Glu343Lys, inherited from each heterozygous parent. There was a marked elevation of urine succinyladenosine, confirming the diagnosis of adenylosuccinate lyase deficiency. In conclusion, myoclonic tremor status expands the spectrum of movement disorders seen in adenylosuccinate lyase deficiency.


Subject(s)
Adenylosuccinate Lyase/deficiency , Adenylosuccinate Lyase/genetics , Autistic Disorder/genetics , Myoclonus/genetics , Phenotype , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Tremor/genetics , Autistic Disorder/diagnosis , Child , Homozygote , Humans , Male , Mutation, Missense , Myoclonus/diagnosis , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Tremor/diagnosis
8.
Hum Mol Genet ; 28(22): 3805-3814, 2019 11 15.
Article in English | MEDLINE | ID: mdl-31600779

ABSTRACT

We report for the first time an autosomal recessive inborn error of de novo purine synthesis (DNPS)-PAICS deficiency. We investigated two siblings from the Faroe Islands born with multiple malformations resulting in early neonatal death. Genetic analysis of affected individuals revealed a homozygous missense mutation in PAICS (c.158A>G; p.Lys53Arg) that affects the structure of the catalytic site of the bifunctional enzyme phosphoribosylaminoimidazole carboxylase (AIRC, EC 4.1.1.21)/phosphoribosylaminoimidazole succinocarboxamide synthetase (SAICARS, EC 6.3.2.6) (PAICS). The mutation reduced the catalytic activity of PAICS in heterozygous carrier and patient skin fibroblasts to approximately 50 and 10% of control levels, respectively. The catalytic activity of the corresponding recombinant enzyme protein carrying the mutation p.Lys53Arg expressed and purified from E. coli was reduced to approximately 25% of the wild-type enzyme. Similar to other two known DNPS defects-adenylosuccinate lyase deficiency and AICA-ribosiduria-the PAICS mutation prevented purinosome formation in the patient's skin fibroblasts, and this phenotype was corrected by transfection with the wild-type but not the mutated PAICS. Although aminoimidazole ribotide (AIR) and aminoimidazole riboside (AIr), the enzyme substrates that are predicted to accumulate in PAICS deficiency, were not detected in patient's fibroblasts, the cytotoxic effect of AIr on various cell lines was demonstrated. PAICS deficiency is a newly described disease that enhances our understanding of the DNPS pathway and should be considered in the diagnosis of families with recurrent spontaneous abortion or early neonatal death.


Subject(s)
Carboxy-Lyases/genetics , Peptide Synthases/genetics , Purines/metabolism , Abnormalities, Multiple/genetics , Adenylosuccinate Lyase/deficiency , Autistic Disorder , Carboxy-Lyases/metabolism , Denmark , Fatal Outcome , Humans , Infant, Newborn , Male , Mutation , Peptide Synthases/metabolism , Perinatal Death , Phenotype , Purine-Pyrimidine Metabolism, Inborn Errors , Purines/biosynthesis
10.
Ital J Pediatr ; 43(1): 65, 2017 Aug 02.
Article in English | MEDLINE | ID: mdl-28768552

ABSTRACT

BACKGROUND: Adenylosuccinate lyase (ADSL) deficiency is a defect of purine metabolism affecting purinosome assembly and reducing metabolite fluxes through purine de novo synthesis and purine nucleotide recycling pathways. The disorder shows a wide spectrum of symptoms from slowly to rapidly progressing forms. The most severe form is characterized by neonatal encephalopathy, absence of spontaneous movement, respiratory failure, intractable seizures, and early death within the first weeks of life. More commonly, ADSL presents purely neurologic clinical picture characterized by severe psychomotor retardation, microcephaly, early onset of seizures, and autistic features (type I) or a more slowly progressing form with later onset, and major features including slight to moderate psychomotor retardation, and transient contact disturbances (type II). Diagnostic markers are the presence of succinylaminoimidazole carboxamide riboside (SAICAr) and succinyladenosine (SAdo) in extracellular fluids. ADSL is a rare disorder, although its prevalence remains unknown. Of note, the wide range of essentially nonspecific manifestations and lack of awareness of the condition often prevent diagnosis. CASE PRESENTATION: We present here the case of particularly mild, late onset ADSL that has been unsuccessfully investigated until whole exome sequencing (WES) was performed. CONCLUSIONS: Besides emphasizing the valuable diagnostic value of WES, this report provides new data further documenting the relatively wide clinical manifestation of ADSL.


Subject(s)
Adenylosuccinate Lyase/deficiency , Autistic Disorder/diagnostic imaging , Autistic Disorder/genetics , Developmental Disabilities/genetics , Magnetic Resonance Imaging/methods , Purine-Pyrimidine Metabolism, Inborn Errors/diagnostic imaging , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Adenylosuccinate Lyase/genetics , Child , Developmental Disabilities/diagnostic imaging , Developmental Disabilities/pathology , Epilepsy/diagnosis , Epilepsy/etiology , Female , Follow-Up Studies , Humans , Rare Diseases , Severity of Illness Index , Exome Sequencing
11.
Sci Rep ; 7(1): 1625, 2017 05 09.
Article in English | MEDLINE | ID: mdl-28487569

ABSTRACT

Whole-exome sequencing (WES), one of the next-generation sequencing (NGS), has become a powerful tool to identify exonic variants. Investigating causality of the sequence variants in human disease becomes an important part in NGS for the research and clinical applications. Recently, important guidelines on them have been published and will keep on updating. In our study, two Chinese families, with the clinical diagnosis of "Epilepsy", which presented with seizures, psychomotor retardation, hypotonia and etc. features, were sequenced by Trio-WES (including the proband and the unaffected parents), and a standard interpretation of the identified variants was performed referring to the recently updated guidelines. Finally, we identified three novel mutations (c.71 C > T, p.P24L; c.1387-1389delGAG, p.E463-; c.134 G > A, p.W45*; NM_000026) in ADSL in the two Chinese families, and confirmed them as the causal variants to the disease-Adenylosuccinate Lyase Deficiency. Previous reported specific therapy was also introduced to the patients after our refined molecular diagnosis, however, the effect was very limited success. In summary, our study demonstrated the power and advantages of WES in exploring the etiology of human disease. Using the constantly updated guidelines to conduct the WES study and to interpret the sequence variants are a necessary strategy to make the molecular diagnosis and to guide the individualized treatment of human disease.


Subject(s)
Adenylosuccinate Lyase/deficiency , Autistic Disorder/genetics , Exome Sequencing/methods , Guidelines as Topic , Mutation/genetics , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Adenylosuccinate Lyase/genetics , Autistic Disorder/therapy , Base Sequence , Child, Preschool , Female , Humans , Infant , Male , Pedigree , Purine-Pyrimidine Metabolism, Inborn Errors/therapy
12.
Genome Res ; 26(10): 1355-1362, 2016 10.
Article in English | MEDLINE | ID: mdl-27440870

ABSTRACT

Essential genes refer to those whose null mutation leads to lethality or sterility. Theoretical reasoning and empirical data both suggest that the fatal effect of inactivating an essential gene can be attributed to either the loss of indispensable core cellular function (Type I), or the gain of fatal side effects after losing dispensable periphery function (Type II). In principle, inactivation of Type I essential genes can be rescued only by re-gain of the core functions, whereas inactivation of Type II essential genes could be rescued by a further loss of function of another gene to eliminate the otherwise fatal side effects. Because such loss-of-function rescuing mutations may occur spontaneously, Type II essential genes may become nonessential in a few individuals of a large population. Motivated by this reasoning, we here carried out a systematic screening for Type II essentiality in the yeast Saccharomyces cerevisiae Large-scale whole-genome sequencing of essentiality-reversing mutants reveals 14 cases whereby the inactivation of an essential gene is rescued by loss-of-function mutations on another gene. In particular, the essential gene encoding the enzyme adenylosuccinate lyase (ADSL) is shown to be Type II, suggesting a loss-of-function therapeutic strategy for the human disorder ADSL deficiency. A proof-of-principle test of this strategy in the nematode Caenorhabditis elegans shows promising results.


Subject(s)
Adenylosuccinate Lyase/deficiency , Autistic Disorder/genetics , Genes, Essential , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Saccharomyces cerevisiae Proteins/genetics , Adenylosuccinate Lyase/genetics , Animals , Autistic Disorder/therapy , Caenorhabditis elegans/genetics , Genetic Therapy , Humans , Loss of Function Mutation , Purine-Pyrimidine Metabolism, Inborn Errors/therapy , Saccharomyces cerevisiae/genetics
13.
J Inherit Metab Dis ; 38(2): 231-42, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25112391

ABSTRACT

Adenylosuccinate lyase ADSL) deficiency is a defect of purine metabolism affecting purinosome assembly and reducing metabolite fluxes through purine de novo synthesis and purine nucleotide recycling pathways. Biochemically this defect manifests by the presence in the biologic fluids of two dephosphorylated substrates of ADSL enzyme: succinylaminoimidazole carboxamide riboside (SAICAr) and succinyladenosine (S-Ado). More than 80 individuals with ADSL deficiency have been identified, but incidence of the disease remains unknown. The disorder shows a wide spectrum of symptoms from slowly to rapidly progressing forms. The fatal neonatal form has onset from birth and presents with fatal neonatal encephalopathy with a lack of spontaneous movement, respiratory failure, and intractable seizures resulting in early death within the first weeks of life. Patients with type I (severe form) present with a purely neurologic clinical picture characterized by severe psychomotor retardation, microcephaly, early onset of seizures, and autistic features. A more slowly progressing form has also been described (type II, moderate or mild form), as having later onset, usually within the first years of life, slight to moderate psychomotor retardation and transient contact disturbances. Diagnosis is facilitated by demonstration of SAICAr and S-Ado in extracellular fluids such as plasma, cerebrospinal fluid and/or followed by genomic and/or cDNA sequencing and characterization of mutant proteins. Over 50 ADSL mutations have been identified and their effects on protein biogenesis, structural stability and activity as well as on purinosome assembly were characterized. To date there is no specific and effective therapy for ADSL deficiency.


Subject(s)
Adenylosuccinate Lyase/deficiency , Autistic Disorder , Purine-Pyrimidine Metabolism, Inborn Errors , Adenylosuccinate Lyase/genetics , Animals , Autistic Disorder/diagnosis , Autistic Disorder/enzymology , Autistic Disorder/epidemiology , Autistic Disorder/genetics , Autistic Disorder/therapy , Diagnosis, Differential , Disease Progression , Genetic Predisposition to Disease , Genetic Testing , Humans , Mutation , Phenotype , Predictive Value of Tests , Prognosis , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Purine-Pyrimidine Metabolism, Inborn Errors/enzymology , Purine-Pyrimidine Metabolism, Inborn Errors/epidemiology , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Purine-Pyrimidine Metabolism, Inborn Errors/therapy , Risk Factors
14.
Clin Biochem ; 48(1-2): 2-7, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25445730

ABSTRACT

OBJECTIVES: Stable isotope dilution coupled with liquid chromatography-tandem mass spectrometry (LC-MS/MS) is the sensitive method for screening for various inherited metabolic disorders using dried blood spots (DBSs). We present a method for LC-MS/MS determination of succinyladenosine (SAdo) and succinylaminoimidazole carboxamide riboside (SAICAr), biomarkers for adenylosuccinate lyase deficiency (dADSL), in DBS. DESIGN AND METHODS: SAICAr and SAdo were separated on a Symmetry-C18 column and detected using positive electrospray ionisation in selected reaction monitoring mode. The quantification was performed using the isotopically labelled internal standards SAdo-(13)C4 and SAICAr-(13)C4, which were prepared via ADSL-catalysed reactions of fumarate-(13)C4 with adenosine monophosphate and aminoimidazole carboxamide ribotide, respectively, and subsequent alkaline phosphatase-catalysed dephosphorylation of the resulting products. RESULTS: The detection of SAICAr and SAdo in DBS was linear over the range of 0-25µmol/L. The respective intra-assay and inter-assay imprecision values were less than 10.7% and 15.2% for SAICAr and 4.7% and 5.7% for SAdo. The recoveries from DBS spiked with different concentrations of SAICAr and SAdo were between 94% and 117%. The concentrations of SAICAr and SAdo were higher in the archived DBS from dADSL patients (SAICAr, 0.03-4.7µmol/L; SAdo, 1.5-21.3µmol/L; n=5) compared to those of the control subjects (SAICAr, 0-0.026µmol/L; SAdo, 0.06-0.14µmol/L; n=31), even after DBSs from dADSL patients were stored for 2-23years. CONCLUSIONS: We developed and validated a method of succinylpurine analysis in DBS that improves selective screening for dADSL in the paediatric population and may be used for retrospective diagnosis to aid the genetic counselling of affected families.


Subject(s)
Adenosine/analogs & derivatives , Adenylosuccinate Lyase/deficiency , Aminoimidazole Carboxamide/analogs & derivatives , Dried Blood Spot Testing/methods , Purine-Pyrimidine Metabolism, Inborn Errors/blood , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Ribonucleosides/blood , Tandem Mass Spectrometry/methods , Adenosine/blood , Adenylosuccinate Lyase/blood , Aminoimidazole Carboxamide/blood , Autistic Disorder , Carbon Isotopes , Chromatography, Liquid , Humans , Infant, Newborn , Limit of Detection , Reference Standards
15.
Article in English | MEDLINE | ID: mdl-25482736

ABSTRACT

BACKGROUND: Metabolomics is becoming an important tool in clinical research and the diagnosis of human diseases. It has been used in the diagnosis of inherited metabolic disorders with pronounced biochemical abnormalities. The aim of this study was to determine if it could be applied in the diagnosis of inherited metabolic disorders (IMDs) with less clear biochemical profiles from urine samples using an untargeted metabolomic approach. METHODS: A total of 14 control urine samples and 21 samples from infants with cystinuria, maple syrup urine disease, adenylosuccinate lyase deficiency and galactosemia were tested. Samples were analyzed by liquid chromatography on aminopropyl column in aqueous normal phase separation system using gradient elution of acetonitrile/ammonium acetate. Detection was performed by time-of-flight mass spectrometer fitted with electrospray ionisation in positive mode. The data were statistically processed using principal component analysis (PCA), principal component discriminant function analysis (PCA-DFA) and partial least squares (PLS) regression. RESULTS: All patient samples were first distinguished from controls using unsupervised PCA. Discrimination of the patient samples was then unambiguously verified using supervised PCA-DFA. Known markers of the diseases in question were successfully confirmed and a potential new marker emerged from the PLS regression. CONCLUSION: This study showed that untargeted metabolomics can be applied in the diagnosis of mild IMDs with less clear biochemical profiles.


Subject(s)
Biomarkers/urine , Metabolic Diseases/diagnosis , Metabolomics/methods , Adenylosuccinate Lyase/deficiency , Adolescent , Adult , Autistic Disorder/diagnosis , Case-Control Studies , Child , Chromatography, High Pressure Liquid/methods , Cystinuria/diagnosis , Female , Galactosemias/diagnosis , Humans , Infant , Male , Maple Syrup Urine Disease/diagnosis , Mass Spectrometry/methods , Principal Component Analysis , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Young Adult
16.
Neuropediatrics ; 45(1): 50-5, 2014 Feb.
Article in English | MEDLINE | ID: mdl-23504561

ABSTRACT

We present a 9-year follow-up of a patient with an attenuated (type II) adenylosuccinate lyase deficiency with no obvious signs of disease progression and degradation. We also review the literature, focusing on attenuated phenotype, and we report a positive effect of a ketogenic diet on seizure control. The patient presented at the age of 5 months with a history of global developmental delay. Screening of urinary purine metabolites revealed elevation of succinyladenosine and succinylaminoimidazolecarboxamide riboside (a ratio of 2:1). Mutation analysis revealed a compound heterozygosity for missense mutations: p.R426H and p.D268H. She began to walk independently at the age of 3 years. From the age of 4 years, her communication skills improved and she presented fewer autistic features. Due to poor results in seizure control, the ketogenic diet was introduced at the age of 7 years, resulting in reduction of seizure frequency. Currently, at the age of 9 years, the girl is attending a special kindergarten and is functioning very well in her preschool group. She began to make statements that form a logical continuity and make progress in simple manual operations. The patient participates in therapies such as pet therapy, hippotherapy, speech therapy, physiotherapy, hydrotherapy, and music therapy.


Subject(s)
Adenylosuccinate Lyase/deficiency , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Autistic Disorder , Child , Disease Progression , Female , Follow-Up Studies , Humans
17.
Clin Biochem ; 46(18): 1899-901, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24183879

ABSTRACT

OBJECTIVES: Adenylosuccinate lyase deficiency (dADSL) is a rare inherited metabolic disorder. Biochemical diagnosis of the disease is based on the determination of enormously elevated urinary levels of succinylaminoimidazole carboxamide riboside (SAICA-riboside) and succinyladenosine (SAdo). We report a case of false negative screening for dADSL caused by deribosylation of the urinary biomarkers SAICA-riboside and SAdo. DESIGN AND METHODS: A thin-layer chromatography (TLC) method with Pauly reagent detection of SAICA-riboside was used as a screening method. High-performance liquid chromatography with diode-array detection (HPLC-DAD) and LC-MS/MS methods were used for the identification and quantitative determination of SAICA-riboside, SAdo, succinylaminoimidazole carboxamide (SAICA) and succinyladenine (SA). RESULTS: Following a negative TLC screening in a known case of dADSL, we analyzed urine using HPLC-DAD. The concentration of SAICA-riboside was 2.7mmol/mol creatinine (below the TLC detection limit), and we detected the two abnormal metabolites identified by LC-MS/MS as SAICA and SA. We showed that SAICA and SA were produced by deribosylation of SAICA-riboside and SAdo in the patient's urine. Studies performed by monitoring the production of SAICA and SA after the addition of SAICA-riboside and SAdo to the patient's urine and to urine samples from patients with urinary tract infections suggested that deribosylation is facilitated by bacterial enzymes. CONCLUSIONS: Screening methods for the diagnosis of dADSL may be falsely negative due to bacteria-mediated deribosylation of SAICA-riboside and SAdo. HPLC-DAD or LC-MS/MS analyses allowing for simultaneous detection of SAICA-riboside, SAdo and their deribosylation products SAICA and SA should be preferentially used for the diagnosis of dADSL in urine.


Subject(s)
Adenylosuccinate Lyase/deficiency , Aminoimidazole Carboxamide/analogs & derivatives , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Purine-Pyrimidine Metabolism, Inborn Errors/urine , Ribonucleosides/urine , Adenosine/analogs & derivatives , Adenosine/urine , Adenylosuccinate Lyase/urine , Aminoimidazole Carboxamide/metabolism , Aminoimidazole Carboxamide/urine , Autistic Disorder , Bacterial Proteins/metabolism , Child, Preschool , Chromatography, High Pressure Liquid , Chromatography, Thin Layer/methods , Enterococcus faecalis , Enzymes/metabolism , False Negative Reactions , Humans , Klebsiella pneumoniae , Ribonucleosides/metabolism , Tandem Mass Spectrometry/methods , Urine/microbiology
18.
Dev Med Child Neurol ; 55(11): 1060-4, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23937257

ABSTRACT

AIM: The aim of this study was to develop a high-throughput urine screening technique for adenylosuccinate lyase (ADSL) deficiency and to evaluate S-adenosyl-l-methionine (SAMe) as a potential treatment for this disorder. METHOD: Testing for succinyladenosine (S-Ado), a marker of ADSL deficiency, was incorporated into a screening panel for urine biomarkers for inborn errors of metabolism using electrospray tandem mass spectrometry. Liquid chromatography-mass spectrometry and high-performance liquid chromatography were used to confirm and monitor the response of metabolites to oral SAMe treatment. RESULTS: Increased levels of S-Ado were detected in a 3-month-old male infant with hypotonia and seizures. ADSL gene sequencing revealed a previously described c.-49T>C mutation and a novel c.889_891dupAAT mutation, which was likely to disrupt enzyme function. After 9 months of SAMe treatment, there was no clear response evidenced in urine metabolite levels or clinical parameters. INTERPRETATION: These results demonstrate proof of the principle for the high-throughput urine screening technique, allowing earlier diagnosis of patients with ADSL deficiency. However, early treatment with SAMe does not appear to be effective in ADSL deficiency. It is suggested that although SAMe treatment may ameliorate purine nucleotide deficiency, it cannot correct metabolic syndromes in which a toxic nucleotide is present, in this case presumed to be succinylaminoimidazole carboxamide ribotide.


Subject(s)
Adenylosuccinate Lyase/deficiency , High-Throughput Screening Assays , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , S-Adenosylmethionine/administration & dosage , Adenosine/analogs & derivatives , Adenosine/metabolism , Adenylosuccinate Lyase/drug effects , Adenylosuccinate Lyase/genetics , Adenylosuccinate Lyase/urine , Administration, Oral , Autistic Disorder , Child, Preschool , Chromatography, Liquid , Electroencephalography , Genotype , Humans , Longitudinal Studies , Male , Mutation/genetics , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Purine-Pyrimidine Metabolism, Inborn Errors/urine , Spectrometry, Mass, Electrospray Ionization
19.
Biochim Biophys Acta ; 1834(8): 1545-53, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23714113

ABSTRACT

Adenylosuccinate lyase (ADSL) is a homotetrameric enzyme involved in the de novo purine biosynthesis pathway and purine nucleotide cycle. Missense mutations in the protein lead to ADSL deficiency, an inborn error of purine metabolism characterized by neurological and physiological symptoms. ADSL deficiency is biochemically diagnosed by elevated levels of succinylaminoimidazolecarboxamide riboside (SAICAr) and succinyladenosine (S-Ado), the dephosphorylated derivatives of the substrates. S-Ado/SAICAr ratios have been associated with three phenotypic groups. Different hypotheses to explain these ratios have been proposed. Recent studies have focused on measuring activity on the substrates independently. However, it is important to examine mixtures of the substrates to determine if mutations affect enzyme activity on both substrates similarly in these conditions. The two substrates may experience an indirect communication due to being acted upon by the same enzyme, altering their activities from the non-competitive case. In this study, we investigate this hidden coupling between the two substrates. We chose two mutations that represent extremes of the phenotype, R426H and R303C. We describe a novel electrochemical-detection method of measuring the kinetic activity of ADSL in solution with its two substrates at varying concentration ratios. Furthermore, we develop an enzyme kinetic model to predict substrate activity from a given ratio of substrate concentrations. Our findings indicate a non-linear dependence of the activities on the substrate ratios due to competitive binding, distinct differences in the behaviors of the different mutations, and S-Ado/SAICAr ratios in patients could be explained by inherent properties of the mutant enzyme.


Subject(s)
Adenosine/analogs & derivatives , Adenylosuccinate Lyase/genetics , Aminoimidazole Carboxamide/analogs & derivatives , Mutation, Missense/genetics , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Ribonucleotides/metabolism , Adenosine/metabolism , Adenylosuccinate Lyase/deficiency , Adenylosuccinate Lyase/metabolism , Aminoimidazole Carboxamide/metabolism , Autistic Disorder , Chromatography, High Pressure Liquid , Electrochemistry , Homozygote , Humans , Kinetics , Mutagenesis, Site-Directed , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , Substrate Specificity
20.
Handb Clin Neurol ; 113: 1827-36, 2013.
Article in English | MEDLINE | ID: mdl-23622405

ABSTRACT

The purines are a group of molecules used by all cells for many vital biochemical processes including energy-requiring enzymatic reactions, cofactor-requiring reactions, synthesis of DNA or RNA, signaling pathways within and between cells, and other processes. Defects in some of the enzymes of purine metabolism are known to be associated with specific clinical disorders, and neurological problems may be a presenting sign or the predominant clinical problem for several of them. This chapter describes three disorders for which the clinical features and metabolic basis are well characterized. Deficiency of adenylosuccinate-lyase (ADSL) causes psychomotor retardation, epilepsy, and autistic features. Lesch-Nyhan disease is caused by deficiency of hypoxanthine-guanine phosphoribosyltransferase (HPRT) and is characterized by hyperuricemia, motor and cognitive disability, and self-injurious behavior. Deficiency of myoadenylate deaminase (mAMPD) is associated with myopathic features. In addition to these disorders, several other disorders are briefly summarized. These include defects of phosphoribosylpyrophosphate synthase, adenosine deaminase (ADA), purine nucleoside phosphorylase (PND), deoxyguanosine kinase (dGK), or IMP dehydrogenase (IMPDH). Each of these disorders provides an unusual window on the unique importance of purine metabolism for function of different parts of the nervous system.


Subject(s)
AMP Deaminase/deficiency , Adenylosuccinate Lyase/deficiency , Lesch-Nyhan Syndrome/diagnosis , Purine-Pyrimidine Metabolism, Inborn Errors/diagnosis , AMP Deaminase/genetics , AMP Deaminase/metabolism , Adenylosuccinate Lyase/genetics , Adenylosuccinate Lyase/metabolism , Autistic Disorder , Child , Humans , Lesch-Nyhan Syndrome/genetics , Lesch-Nyhan Syndrome/metabolism , Purine-Pyrimidine Metabolism, Inborn Errors/genetics , Purine-Pyrimidine Metabolism, Inborn Errors/metabolism
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