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1.
J Ethnopharmacol ; 282: 114560, 2022 Jan 10.
Article in English | MEDLINE | ID: mdl-34454053

ABSTRACT

ETHNOPHARMACOLOGICAL RELEVANCE: Nauclea officinalis, a widely used Li medicine, has been used for the treatment of cold, fever, bronchitis, pneumonia, acute tonsillitis, and other ailments. Modern pharmacological studies have demonstrated that the most abundant and active components in N. officinalis are alkaloids, which possess various biological properties such as antibacterial and antitumor activities. AIM OF THE STUDY: To investigate the phytochemical profile of a selected group of alkaloids from the N. officinalis total alkaloids, and to determine the chemical profile of the alkaloids extracted from rat plasma. Further investigation was conducted to determine the pharmacokinetic behaviors of 11 selected major alkaloids, including pumiloside, naucleoxoside A, naucleoxoside B, nauclefine, angustidine, angustoline, (3S,19S)-3,14-dihydroangustoline,[α]D20: (-)191°, (3S,19R)-3,14-dihydroangustoline, [α]D20: (-) 294.7°, strictosamide, angustine, and 3,14-dihydroangustine. MATERIALS AND METHODS: N. officinalis total alkaloids were extracted with 79% ethanol and enriched with AB-8 macroporous resin. The phytochemical profile of alkaloids from the N. officinalis total alkaloids and the chemical profile of the alkaloids extracted from rat plasma were first analyzed by UPLC-Q-TOF-MS/MS. A simple, convenient, and sensitive LC-ESI-MS/MS method was subsequently developed and validated for the simultaneous determination of major active alkaloids in rat plasma after oral administration of N. officinalis total alkaloids. After addition of an internal standard (verapamil), plasma samples were pretreated first by protein precipitation with methanol and then underwent liquid-liquid extraction with ethyl acetate. Chromatographic separation was achieved using a Waters BEH C18 column (2.1 mm × 100 mm, 1.7 µm) at 30 °C, with gradient elution using a mobile phase consisting of 0.1% formic acid aqueous solution (A) and acetonitrile (B), a flow rate of 0.2 mL/min, and a total run time of 30 min. The detection was performed using an electrospray ionization triple quadrupole tandem mass spectrometer with multiple reaction monitoring and positive ionization mode. RESULTS: Based on the fragmentation patterns of 11 authentic alkaloids and previous reports, 55 alkaloids were identified or tentatively identified in the N. officinalis total alkaloids. Among them, 25 alkaloids were absorbed through the gastrointestinal tract in rats after administration of the N. officinalis total alkaloids. The 11 alkaloids were selected for quantitative analysis. The established quantitative method was fully validated and proved to be sensitive and specific. Satisfactory linearity of the 11 alkaloids obtained in the respective concentration ranges (r > 0.9931). The lower limits of quantification for strictosamide was 20.86 ng/ml, and the other ten alkaloids were all less than 4.47 ng/ml in rat plasma. The intra-and inter-day precision was less than 15% for all 11 alkaloids in terms of relative standard deviation, and the accuracies ranged from -11.4% to 11.1% in terms of relative error. Extraction recovery, matrix effect, and stability were within the required limits in rat plasma. CONCLUSION: The validated method was successfully applied to investigate the pharmacokinetics of the 11 alkaloids in rat plasma after oral administration of N. officinalis total alkaloids. Eleven alkaloids were rapidly absorbed to achieve a maximum plasma concentration with Tmax from 0.25 h to 1.5 h after oral administration. The pharmacokinetic parameters and plasma concentration-time profiles will prove valuable in pre-clinical and clinical investigations on the disposition of N. officinalis total alkaloids.


Subject(s)
Alkaloids , Plant Extracts , Rubiaceae , Administration, Oral , Alkaloids/chemistry , Alkaloids/classification , Alkaloids/pharmacokinetics , Animals , Chromatography, High Pressure Liquid/methods , Chromatography, Liquid/methods , Drugs, Chinese Herbal/chemistry , Drugs, Chinese Herbal/pharmacokinetics , Evaluation Studies as Topic , Liquid-Liquid Extraction/methods , Plant Extracts/chemistry , Plant Extracts/pharmacology , Rats , Rats, Sprague-Dawley , Spectrometry, Mass, Electrospray Ionization/methods , Tandem Mass Spectrometry/methods
2.
Acta toxicol. argent ; 29(3): 121-126, dic. 2021. graf
Article in Spanish | LILACS | ID: biblio-1374204

ABSTRACT

Resumen Nicotiana glauca también llamada Palán Palán, es un arbusto con hojas verdes azuladas y despulidas y una flor amarilla tubular pendulante que presenta alcaloides piridínicos, como nicotina, nornicotina, anatabina y anabastina (análogo estructural de la Nicotina). Se presenta el caso clínico de una paciente de 50 años con cuadro agudo de debilidad muscular generalizada que evoluciona con paro respiratorio, tras la ingesta accidental de una cantidad desconocida de hojas de Nicotiana glauca, cultivadas en una huerta hogareña mediante técnica de hidroponía y confundidas por su conviviente con espinaca. Presentó aumento de lactato y Troponina Ultra Sensible e Hipoquinesia Global de Ventrículo Izquierdo en el ecocardiograma, compatible con Aton tamiento Miocárdico (AM), que evolucionó favorablemente. Si bien hay pocos reportes, se han informado muertes de animales y humanos, tras la ingesta accidental de Nicotiana glauca. El inicio del cuadro es rápido, con patrón bifásico, con vómitos y estímulo simpático, seguido por bloqueo ganglionar y neuromuscular, pudiendo presentar paro respiratorio, shock, convulsiones y coma. El AM es una disfunción miocárdica prolongada con retorno gradual de la actividad contráctil, posterior a un episodio breve de isquemia grave, puede ser asintomático, pudiendo presentar alteraciones en el electrocardiograma, enzimas cardíacas o ecocardiograma. Generalmente presenta pronóstico favorable, pudiendo presentar insuficiencia cardíaca ante patologías concurrentes o aumento de requerimientos de oxígeno.


Abstract Nicotiana glauca is a shrub with bluish green leaves and a pendulous tubular yellow flower. It has pyridine alkaloids, such as nicotine, nornicotine, anatabine and anabastine (structural analog of Nicotine). We present the case of a 50 years old pa- tient with acute generalized muscle weakness that evolves to respiratory arrest, after accidentally ingesting an unknown quantity of Nicotiana glauca leaves, grown in a home vegetable garden, using a hydroponic technique and confused by her cohabiting with spinach. She presented increased lactate and Ultra Sensitive Troponin and Left Ventricular Global Hypokinesia in the echo- cardiogram, compatible with Myocardial Stunned, that it evolved favorably. There are few reports, animal and human deaths have been reported following accidental ingestion of Nicotiana glauca. The onset of the symptoms is early, with a biphasic pattern, with vomiting and sympathetic stimulation, followed by ganglionic and neuromuscular blockage and may present respiratory arrest, shock, seizures and coma. Myocardial Stunned is a prolonged myocardial dysfunction with gradual return of contractile activity after a brief episode of severe ischemia, it can be asymptomatic, and it can present alterations in the electrocardiogram, cardiac enzymes or echocardiogram. Generally presents a benign prognosis, being able to present heart failure with concurrent patholo- gies or increased requirements.


Subject(s)
Humans , Female , Middle Aged , Poisoning/complications , Poisoning/diagnosis , Poisoning/therapy , Nicotiana/adverse effects , Myocardial Stunning/epidemiology , Alkaloids/adverse effects , Alkaloids/pharmacology , Poisoning/epidemiology , Nicotiana/anatomy & histology , Alkaloids/classification
3.
Molecules ; 26(15)2021 Jul 28.
Article in English | MEDLINE | ID: mdl-34361712

ABSTRACT

The genus Maytenus is a member of the Celastraceae family, of which several species have long been used in traditional medicine. Between 1976 and 2021, nearly 270 new compounds have been isolated and elucidated from the genus Maytenus. Among these, maytansine and its homologues are extremely rare in nature. Owing to its unique skeleton and remarkable bioactivities, maytansine has attracted many synthetic endeavors in order to construct its core structure. In this paper, the current status of the past 45 years of research on Maytenus, with respect to its chemical and biological activities are discussed. The chemical research includes its structural classification into triterpenoids, sesquiterpenes and alkaloids, along with several chemical synthesis methods of maytansine or maytansine fragments. The biological activity research includes activities, such as anti-tumor, anti-bacterial and anti-inflammatory activities, as well as HIV inhibition, which can provide a theoretical basis for the better development and utilization of the Maytenus.


Subject(s)
Alkaloids/chemistry , Maytansine/analogs & derivatives , Maytenus/chemistry , Phytochemicals/chemistry , Sesquiterpenes/chemistry , Triterpenes/chemistry , Alkaloids/classification , Alkaloids/isolation & purification , Alkaloids/pharmacology , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/isolation & purification , Anti-Bacterial Agents/pharmacology , Anti-HIV Agents/chemistry , Anti-HIV Agents/isolation & purification , Anti-HIV Agents/pharmacology , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/isolation & purification , Anti-Inflammatory Agents/pharmacology , Antineoplastic Agents, Phytogenic/chemistry , Antineoplastic Agents, Phytogenic/isolation & purification , Antineoplastic Agents, Phytogenic/pharmacology , Humans , Maytansine/isolation & purification , Maytansine/pharmacology , Maytenus/metabolism , Molecular Structure , Phytochemicals/classification , Phytochemicals/isolation & purification , Phytochemicals/pharmacology , Plants, Medicinal , Sesquiterpenes/classification , Sesquiterpenes/isolation & purification , Sesquiterpenes/pharmacology , Structure-Activity Relationship , Triterpenes/classification , Triterpenes/isolation & purification , Triterpenes/pharmacology
4.
ScientificWorldJournal ; 2021: 6623609, 2021.
Article in English | MEDLINE | ID: mdl-33986636

ABSTRACT

BACKGROUND: Nigella sativa L (NS) is a powerful antioxidant and medicinal plant with many therapeutic applications particularly in traditional medicine for respiratory, gastrointestinal, rheumatic, and inflammatory disorders, as well as cancer. OBJECTIVE: The aim of this study is to extract the active ingredients from the Moroccan Nigella sativa L and determine its antioxidant properties. We hypothesize that the separation of the compounds from Nigella sativa L has either a positive or negative effect on antioxidants. To study this, we explored different methods to simultaneously extract and separate compounds from Nigella sativa L and performed antioxidant tests (ß-carotene and DPPH) for all collected fractions. METHODS: Nigella sativa L was hot-extracted by Soxhlet and mother extracts and was separated using silica column chromatography with adequate eluents. Qualitative phytochemical tests to determine the chemical families in Nigella sativa L seeds were performed on the fractions. They were also identified and characterized by GC-MS and HPLC-DAD. Then, antioxidant activity was examined by ß-carotene bleaching and DPPH radical scavenger tests. Results and Conclusion. The mother extract hexane FH generated eight different fractions (SH1-8) and the acetone extract FA generated 11 fractions (SA1-11). The FH fractions had a high percentage of fatty acids, and the FA fractions had some interesting polyphenols derivative compounds. Phytochemical screening revealed secondary metabolites such as polyphenols flavonoids, alkaloids, steroids, terpenes coumarins, tannins, and saponins. We found that only two solvents (hexane, acetone) of different polarities could easily extract and simultaneously separate the components of Nigella sativa L. The antioxidant fractions that we collected had close activity to reference compounds but were more active than the corresponding mother extracts. Moreover, several IC50 values of fractions from acetone extract were better than those from hexane. Therefore, the antioxidant activity of Nigella sativa L is more attributed to flavonoids and polyphenols than fatty acids. In summary, the separation of hexane extract presents a more pronounced positive effect for antioxidant tests than acetone extract.


Subject(s)
Antioxidants/isolation & purification , Flavonoids/isolation & purification , Liquid-Liquid Extraction/methods , Nigella sativa/chemistry , Phytochemicals/isolation & purification , Polyphenols/isolation & purification , Seeds/chemistry , Acetone/chemistry , Alkaloids/chemistry , Alkaloids/classification , Alkaloids/isolation & purification , Antioxidants/chemistry , Antioxidants/classification , Biphenyl Compounds/antagonists & inhibitors , Chromatography, High Pressure Liquid , Coumarins/chemistry , Coumarins/classification , Coumarins/isolation & purification , Flavonoids/chemistry , Flavonoids/classification , Hexanes/chemistry , Humans , Morocco , Phytochemicals/chemistry , Phytochemicals/classification , Picrates/antagonists & inhibitors , Plant Extracts/chemistry , Plants, Medicinal , Polyphenols/chemistry , Polyphenols/classification , Saponins/chemistry , Saponins/classification , Saponins/isolation & purification , Solvents/chemistry , Steroids/chemistry , Steroids/classification , Steroids/isolation & purification , Tannins/chemistry , Tannins/classification , Tannins/isolation & purification , Terpenes/chemistry , Terpenes/classification , Terpenes/isolation & purification , beta Carotene/agonists
5.
Biosci Biotechnol Biochem ; 85(5): 1194-1204, 2021 Apr 24.
Article in English | MEDLINE | ID: mdl-33704369

ABSTRACT

Papaya (Carica papaya L.) is widely cultivated in tropical and subtropical countries. While ripe fruit is a popular food item globally, the unripe fruit is only consumed in some Asian countries. To promote the utilization of unripe papaya based on the compositional changes of biological active metabolites, we performed liquid chromatography-Orbitrap-mass spectrometry-based analysis to reveal the comprehensive metabolite profile of the peel and pulp of unripe and ripe papaya fruits. The number of peaks annotated as phenolics and aminocarboxylic acids increased in the pulp and peel of ripe fruit, respectively. Putative carpaine derivatives, known alkaloids with cardiovascular effects, decreased, while carpamic acid derivatives increased in the peel of ripe fruit. Furthermore, the functionality of unripe fruit, the benzyl glucosinolate content, total polyphenol content, and proteolytic activity were detectable after heating and powder processing treatments, suggesting a potential utilization in powdered form as functional material.


Subject(s)
Alkaloids/metabolism , Carboxylic Acids/metabolism , Carica/metabolism , Glucosinolates/metabolism , Metabolic Networks and Pathways/physiology , Polyphenols/metabolism , Alkaloids/chemistry , Alkaloids/classification , Alkaloids/isolation & purification , Carboxylic Acids/chemistry , Carboxylic Acids/classification , Carboxylic Acids/isolation & purification , Carica/chemistry , Chromatography, Liquid , Cooking/methods , Fruit/chemistry , Fruit/metabolism , Functional Food/analysis , Glucosinolates/chemistry , Glucosinolates/classification , Glucosinolates/isolation & purification , Humans , Plant Extracts/chemistry , Polyphenols/chemistry , Polyphenols/classification , Polyphenols/isolation & purification , Principal Component Analysis , Tandem Mass Spectrometry
6.
Molecules ; 25(14)2020 Jul 17.
Article in English | MEDLINE | ID: mdl-32708929

ABSTRACT

This is the first report of an efficient and effective procedure to optimize the biosynthesis of huperzine A (HupA) and huperzine B (HupB) in vitro from Huperzia selago gametophytes. Axenic tissue cultures were established using spores collected from the sporophytes growing in the wild. The prothalia were obtained after 7-18 months. Approximately 90 up to 100% of the gametophytes were viable and grew rapidly after each transfer on to a fresh medium every 3 months. The best biomass growth index for prothallus calculated on a fresh (FW) and dry weight (DW) basis, at 24 weeks of culture, was 2500% (FW) and 2200% (DW), respectively. The huperzine A content in the gametophytes was very high and ranged from 0.74 mg/g to 4.73 mg/g DW. The highest yield HupA biosynthesis at >4 mg/g DW was observed on W/S medium without growth regulators at 8 to 24 weeks of culture. The highest HupB content ranged from 0.10 mg/g to 0.52 mg/g DW and was obtained on the same medium. The results demonstrate the superiority of H. selago gametophyte cultures, with the level of HupA biosynthesis approximately 42% higher compared to sporophyte cultures and 35-fold higher than when the alkaloid was isolated from H. serrata, its current source for the pharmaceutical industry. Moreover, the biosynthesis of HupB was several-fold more efficient than in H. selago sporophytes growing in the wild. HPLC-HR-MS analyses of the extracts identified eight new alkaloids previously unreported in H. selago: deacetylfawcettine, fawcettimine, 16-hydroxyhuperzine B, deacetyllycoclavine, annopodine, lycopecurine, des-N-methylfastigiatine and flabelline.


Subject(s)
Alkaloids/biosynthesis , Huperzia/chemistry , Alkaloids/chemistry , Alkaloids/classification , Alkaloids/isolation & purification , Heterocyclic Compounds, 4 or More Rings/chemistry , Heterocyclic Compounds, 4 or More Rings/isolation & purification , Sesquiterpenes/chemistry , Tissue Culture Techniques
7.
Recent Pat Biotechnol ; 14(3): 203-228, 2020.
Article in English | MEDLINE | ID: mdl-31987028

ABSTRACT

BACKGROUND: Gracilaria has been shown to be an important source of marine bioactive natural biomaterials and compounds. Although there are no enough patents used Gracilaria worldwide, the current study tries to put the Gracilaria on the spot for further important patents in the future. OBJECTIVE: The current study investigates the pharmaceuticals and biochemical activity of Gracilaria because no previous studies have been carried out to examine the biochemical and pharmaceutical activates of Gracilaria from the Suez Canal of Egypt as an excellent source for bioactive compounds. METHODS: Different advanced experimental models and analytical techniques, such as cytotoxicity, total antioxidant capacity, anticancer, and anti-inflammatory profiling were applied. The phytochemical analysis of different constituents was also carried out. RESULTS: The mineral analysis revealed the presence of copper (188.3 ppm) and iron (10.07 ppm) in addition to a remarkable wealth of selenium and sulfur contents giving up to 36% of its dry mass. The elemental analysis showed high contents of sulfur and nitrogen compounds. The GCMS profiling showed varieties of different bioactive compounds, such as fatty acids, different types of carotenoids in addition to pigments, alkaloids, steroids. Many other compounds, such as carbohydrates and amino acids having antioxidant, anti-inflammatory, and antiviral activities, etc. were identified. The cytotoxicity activity of Gracilaria marine extract was very effective against cancerous cell lines and showed high ability as a potent antitumor due to their bioactive constituents. Specialized screening assays using two anticancer experimental models, i.e., PTK and SKH1 revealed 77.88% and 84.50% inhibition anticancer activity; respectively. The anti-inflammatory activities investigated using four different experimental models, i.e., COX1, COX2, IL6, and TNF resulted in 68%, 81.76%, 56.02% and 78.43% inhibition; respectively. Moreover, Gracilaria extracts showed potent anti-Alzheimer with all concentrations. CONCLUSION: Gracilaria proved to be a multi-product source of marine natural products for different biotechnological applications. Our recommendation is to investigate the Gracilaria bioactive secondary metabolites in order to create and innovate in more patents from current important seaweeds (Gracilaria).


Subject(s)
Anti-Inflammatory Agents/chemistry , Antineoplastic Agents, Phytogenic/chemistry , Antioxidants/chemistry , Biological Products/chemistry , Cytotoxins/chemistry , Gracilaria/chemistry , Phytochemicals/chemistry , Alkaloids/chemistry , Alkaloids/classification , Alkaloids/isolation & purification , Alkaloids/pharmacology , Anti-Inflammatory Agents/classification , Anti-Inflammatory Agents/isolation & purification , Anti-Inflammatory Agents/pharmacology , Antineoplastic Agents, Phytogenic/classification , Antineoplastic Agents, Phytogenic/isolation & purification , Antineoplastic Agents, Phytogenic/pharmacology , Antioxidants/classification , Antioxidants/isolation & purification , Antioxidants/pharmacology , Aquatic Organisms , Biological Products/classification , Biological Products/isolation & purification , Biological Products/pharmacology , Carotenoids/chemistry , Carotenoids/classification , Carotenoids/isolation & purification , Carotenoids/pharmacology , Cell Line, Tumor , Cell Survival/drug effects , Copper/chemistry , Copper/isolation & purification , Cytotoxins/classification , Cytotoxins/isolation & purification , Cytotoxins/pharmacology , Fatty Acids/chemistry , Fatty Acids/classification , Fatty Acids/isolation & purification , Fatty Acids/pharmacology , Gracilaria/metabolism , High-Throughput Screening Assays , Humans , Iron/chemistry , Iron/isolation & purification , Nootropic Agents/chemistry , Nootropic Agents/classification , Nootropic Agents/isolation & purification , Nootropic Agents/pharmacology , Patents as Topic , Phytochemicals/classification , Phytochemicals/isolation & purification , Phytochemicals/pharmacology , Pigments, Biological/chemistry , Pigments, Biological/classification , Pigments, Biological/isolation & purification , Pigments, Biological/pharmacology , Selenium Compounds/chemistry
8.
Fitoterapia ; 141: 104481, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31954179

ABSTRACT

In this study, seven previously undescribed steroidal glycoalkaloids, compounds 1-7, were isolated from Solanum lyratum, along with two known ones (8 and 9). Comprehensive spectroscopy techniques were used to determine their structures. Although 1-8 only showed a weak inhibitory effect on the proliferation of the tumor-derived vascular endothelial cells, however, in a former study we found both total steroidal glycoalkaloids from Solanum lyratum (TSGS) and 9 significantly inhibited tumor angiogenesis and its mechanism was linked to its ability to interfere with cell membrane lipid rafts. Lipid rafts are closely related to the functions of tumor-derived exosomes, a vital factor in cancer progression. Thus, we investigated the impacts of TSGS and 9 on the functions of A549-derived exosomes. Our results indicated that A549-derived exosomes can significantly enhance the angiogenesis abilities of human umbilical vein endothelial cells, whereas the intervention of TSGS or 9 significantly inhibited this activity of A549-derived exosomes. These findings suggest that TSGS and 9 exert anti-tumor angiogenesis by inhibiting the pro-angiogenic activity of A549-derived exosomes.


Subject(s)
Alkaloids/chemistry , Alkaloids/pharmacology , Exosomes/drug effects , Neovascularization, Physiologic/drug effects , A549 Cells , Alkaloids/classification , Humans , Molecular Structure
9.
Folia Microbiol (Praha) ; 65(1): 95-102, 2020 Feb.
Article in English | MEDLINE | ID: mdl-30982204

ABSTRACT

From undisturbed Antarctic habitats (permafrost sediments 30-150 thousand years of age, water of Radok Lake) and superficial deposits contaminated with petroleum products, we isolated 14 and 9 strains of Penicillium fungi, respectively. Comparison of the fungal complexes showed them to differ by species composition; only two species-P. palitans and P. solitum-were in the species lists of both groups. The identified secondary metabolites in the investigated strains belonged to diketopiperazine (group of roquefortines, rugulosuvin B), benzodiazepine (anacin, cyclopenins), quinoline alkaloids (viridicatins), clavine ergot alkaloids (α-cyclopiazonic acid, festuclavine, fumigaclavines), polycyclic indole alkaloids (communesin B, chaetoglobosin A), amino acid derivatives (N-acetyltryptamine, chrysogins, penicillin G), polyketides (citreoviridin A, mycophenolic acid), and terpenes (andrastins, phomenone). Strains isolated from anthropogenically altered habitats produced a more complete and characteristic profile of exometabolites, as compared with strains isolated from undisturbed habitats. It is only from contaminated soils there were isolated fungi that produced more structurally diverse secondary metabolites pertaining to polycyclic indole alkaloids and terpenoids. The fungi isolated from contaminated samples can be used in biodegradation of oil spills and bioremediation of the environment, and also as producers of promising biologically active compounds.


Subject(s)
Lakes/microbiology , Penicillium/chemistry , Secondary Metabolism , Soil Microbiology , Alkaloids/analysis , Alkaloids/classification , Antarctic Regions , Biodegradation, Environmental , Ecosystem , Polyketides/analysis
10.
BMC Bioinformatics ; 20(1): 380, 2019 Jul 09.
Article in English | MEDLINE | ID: mdl-31288752

ABSTRACT

BACKGROUND: Alkaloids, a class of organic compounds that contain nitrogen bases, are mainly synthesized as secondary metabolites in plants and fungi, and they have a wide range of bioactivities. Although there are thousands of compounds in this class, few of their biosynthesis pathways are fully identified. In this study, we constructed a model to predict their precursors based on a novel kind of neural network called the molecular graph convolutional neural network. Molecular similarity is a crucial metric in the analysis of qualitative structure-activity relationships. However, it is sometimes difficult for current fingerprint representations to emphasize specific features for the target problems efficiently. It is advantageous to allow the model to select the appropriate features according to data-driven decisions for extracting more useful information, which influences a classification or regression problem substantially. RESULTS: In this study, we applied a neural network architecture for undirected graph representation of molecules. By encoding a molecule as an abstract graph and applying "convolution" on the graph and training the weight of the neural network framework, the neural network can optimize feature selection for the training problem. By incorporating the effects from adjacent atoms recursively, graph convolutional neural networks can extract the features of latent atoms that represent chemical features of a molecule efficiently. In order to investigate alkaloid biosynthesis, we trained the network to distinguish the precursors of 566 alkaloids, which are almost all of the alkaloids whose biosynthesis pathways are known, and showed that the model could predict starting substances with an averaged accuracy of 97.5%. CONCLUSION: We have showed that our model can predict more accurately compared to the random forest and general neural network when the variables and fingerprints are not selected, while the performance is comparable when we carefully select 507 variables from 18000 dimensions of descriptors. The prediction of pathways contributes to understanding of alkaloid synthesis mechanisms and the application of graph based neural network models to similar problems in bioinformatics would therefore be beneficial. We applied our model to evaluate the precursors of biosynthesis of 12000 alkaloids found in various organisms and found power-low-like distribution.


Subject(s)
Alkaloids/classification , Biosynthetic Pathways , Neural Networks, Computer , Algorithms , Alkaloids/chemistry , Metabolome , Models, Theoretical
11.
Fed Regist ; 83(170): 44474-8, 2018 Aug 31.
Article in English | MEDLINE | ID: mdl-30198687

ABSTRACT

The Acting Administrator of the Drug Enforcement Administration is issuing this temporary scheduling order to schedule the synthetic cathinone, 1- (1,3-benzodioxol-5-yl)-2-(ethylamino)- pentan-1-one (N-ethylpentylone, ephylone) and its optical, positional, and geometric isomers, salts, and salts of isomers in schedule I. This action is based on a finding by the Acting Administrator that the placement of Nethylpentylone in schedule I of the Controlled Substances Act (CSA) is necessary to avoid an imminent hazard to the public safety. As a result of this order, the regulatory controls and administrative, civil, and criminal sanctions applicable to schedule I controlled substances will be imposed on persons who handle (manufacture, distribute, reverse distribute, import, export, engage in research, conduct instructional activities or chemical analysis, or possess), or propose to handle N-ethylpentylone.


Subject(s)
Alkaloids/classification , Drug and Narcotic Control/legislation & jurisprudence , Phenethylamines/classification , Designer Drugs/classification , Drug Labeling/legislation & jurisprudence , Humans , Illicit Drugs , Phenethylamines/analysis , United States
12.
Toxins (Basel) ; 10(10)2018 09 26.
Article in English | MEDLINE | ID: mdl-30261585

ABSTRACT

The processed lateral root of Aconitum carmichaelii Deb (Aconiti Radix lateralis praeparata or Fuzi) is a potent traditional herbal medicine extensively used in treatment of cardiovascular diseases, rheumatism arthritis, and bronchitis in many Asian countries. Although Fuzi has promising therapeutic effects, its toxicities are frequently observed. Three main C19-diester-diterpenoid alkaloids (DDAs) are believed to be the principal toxins of the herb. Although toxicokinetic profiles of the toxic DDAs have already been examined in several studies, they have seldom been correlated with the toxicities of Fuzi. The current article aimed to investigate the relationship between the up-to-date toxicokinetic data of the toxic DDAs and the existing evidence of the toxic effects of Fuzi. Relationships between the cardiac toxicity and the plasma and heart concentration of DDAs in mice and rats were established. Based on our findings, clinical monitoring of the plasma concentrations of DDAs of Fuzi is recommended to prevent potential cardiac toxicities. Additionally, caution with respect to potential hepatic and renal toxicity induced by Fuzi should be exercised. In addition, further analyses focusing on the preclinical tissue distribution profile of DDAs and on the long-term toxicokinetic-toxicity correlation of DDAs are warranted for a better understanding of the toxic mechanisms and safer use of Fuzi.


Subject(s)
Aconitum , Alkaloids/pharmacokinetics , Alkaloids/toxicity , Diterpenes/pharmacokinetics , Diterpenes/toxicity , Plant Extracts/toxicity , Alkaloids/blood , Alkaloids/classification , Animals , Diterpenes/blood , Diterpenes/classification , Drugs, Chinese Herbal , Humans , Plant Roots
13.
Georgian Med News ; (274): 164-167, 2018 Jan.
Article in Russian | MEDLINE | ID: mdl-29461247

ABSTRACT

The aim of research was to study underground parts of Aconitum orientale Mill and Aconitum nasutum Fisch exReichemb for the composition of biological active diterpenic alkaloids. The research object was underground parts of Aconitum species. Alkaloids sum was received from raw-material which was alkalined beforehand with chloroform extraction. From the results of research we established, that both species of Georgian flora's Aconitum contains alkaloids: lappaconitine, aconitine, karakoline. Underground parts of Aconitum orientale and Aconitum nasutum differ from eath other with composition of alkaloids spectrum. Underground parts of Aconitum orientale contains bases: ranaconitine, gigactonine, licoctonine, but underground parts of Aconitum nasutum contains: talitizamine, kamakonine, aconosine. Alkaloids' summary substances, which were received from underground parts of Aconitum species spread in Georgia, showed selective cytotoxic activity towards A-549 (lung carcinoma), DLD-1 (intestine adenocarcinoma), WS-1 (human normal fibroblasts).


Subject(s)
Aconitum/chemistry , Alkaloids/pharmacology , Antineoplastic Agents, Phytogenic/pharmacology , Plant Roots/chemistry , A549 Cells , Aconitine/analogs & derivatives , Aconitine/isolation & purification , Alkaloids/classification , Alkaloids/isolation & purification , Antineoplastic Agents, Phytogenic/classification , Antineoplastic Agents, Phytogenic/isolation & purification , Cell Line, Tumor , Cell Survival/drug effects , Chloroform/chemistry , Diterpenes/isolation & purification , Humans , Liquid-Liquid Extraction , Organ Specificity , Plant Extracts/chemistry
14.
Z Naturforsch C J Biosci ; 72(11-12): 497-506, 2017 Oct 26.
Article in English | MEDLINE | ID: mdl-28937967

ABSTRACT

In plants, the presence and distribution of specialized metabolites during the early stages of development are not documented enough, even though their biosynthesis is one of the most important strategies for survival. In this study, five alkaloids and four acetogenins were detected in Annona muricata L. during early development seedling, including three phases of root emergence and three of seedling formation. Hexane and alkaloid extracts were obtained from each organ, which were analyzed in a gas-mass chromatograph and in a high-performance liquid chromatograph coupled with a photodiode array UV detector (HPLC-DAD). This research shows the presence of the acetogenins cis-uvarimicin IV, mosinone, muricina B, and cis-annonacin-10-one, as well as of the alkaloids reticuline, coreximine, anonaine, asimilobine, and nornuciferine, both groups with a variable organ-specific distribution, related with the formation of organs and tissues.


Subject(s)
Acetogenins/isolation & purification , Alkaloids/isolation & purification , Annona/metabolism , Plant Roots/metabolism , Seedlings/metabolism , Acetogenins/chemistry , Acetogenins/classification , Alkaloids/chemistry , Alkaloids/classification , Annona/chemistry , Annona/growth & development , Chromatography, High Pressure Liquid , Gas Chromatography-Mass Spectrometry , Organ Specificity , Plant Development/physiology , Plant Extracts/chemistry , Plant Roots/chemistry , Plant Roots/growth & development , Seedlings/chemistry , Seedlings/growth & development
15.
Fed Regist ; 82(39): 12171-7, 2017 Mar 01.
Article in English | MEDLINE | ID: mdl-28355044

ABSTRACT

With the issuance of this final rule, the Drug Enforcement Administration places 10 synthetic cathinones: 4-methyl-N-ethylcathinone (4-MEC); 4-methyl-alpha-pyrrolidinopropiophenone (4-MePPP); alpha-pyrrolidinopentiophenone ([alpha]-PVP); 1-(1,3-benzodioxol-5-yl)-2-(methylamino)butan-1-one (butylone, bk-MBDB e); 2-(methylamino)-1-phenylpentan-1-one (pentedrone); 1-(1,3-benzodioxol-5-yl)-2-(methylamino)pentan-1-one (pentylone, bk-MBDP); 4-fluoro-N-methylcathinone (4-FMC, flephedrone); 3-fluoro-N-methylcathinone (3-FMC); 1-(naphthalen-2-yl)-2-(pyrrolidin-1-yl)pentan-1-one (naphyrone); alpha-pyrrolidinobutiophenone ([alpha]-PBP) and their optical, positional, and geometric isomers, salts and salts of isomers, whenever the existence of such salts, isomers, and salts of isomers is possible, into schedule I of the Controlled Substances Act. This scheduling action is pursuant to the Controlled Substances Act which requires that such actions be made on the record after opportunity for a hearing through formal rulemaking. This rule continues the imposition of the regulatory controls and administrative, civil, and criminal sanctions applicable to schedule I controlled substances on persons who handle (manufacture, distribute, reverse distribute, import, export, engage in research, conduct instructional activities or chemical analysis, or possess), or propose to handle 4-MEC, 4-MePPP, [alpha]-PVP, butylone, pentedrone, pentylone, 4-FMC, 3- FMC, naphyrone, or [alpha]-PBP.


Subject(s)
Drug and Narcotic Control/legislation & jurisprudence , Illicit Drugs/classification , Alkaloids/classification , Humans , Methylamines/classification , Pentanones/classification , Psychotropic Drugs/classification , United States
16.
Microbiol Res ; 196: 44-68, 2017 Mar.
Article in English | MEDLINE | ID: mdl-28164790

ABSTRACT

In recent years, many studies have shown that phytochemicals exert their antibacterial activity through different mechanisms of action, such as damage to the bacterial membrane and suppression of virulence factors, including inhibition of the activity of enzymes and toxins, and bacterial biofilm formation. In this review, we summarise data from the available literature regarding the antibacterial effects of the main phytochemicals belonging to different chemical classes, alkaloids, sulfur-containing phytochemicals, terpenoids, and polyphenols. Some phytochemicals, besides having direct antimicrobial activity, showed an in vitro synergistic effect when tested in combination with conventional antibiotics, modifying antibiotic resistance. Review of the literature showed that phytochemicals represent a possible source of effective, cheap and safe antimicrobial agents, though much work must still be carried out, especially in in vivo conditions to ensure the selection of effective antimicrobial substances with low side and adverse effects.


Subject(s)
Anti-Bacterial Agents/pharmacology , Phytochemicals/pharmacology , Plant Extracts/pharmacology , Alkaloids/chemistry , Alkaloids/classification , Alkaloids/pharmacology , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/economics , Bacterial Infections/drug therapy , Carotenoids/chemistry , Carotenoids/pharmacology , Drug Resistance, Microbial , Humans , Microbial Sensitivity Tests , Phytochemicals/chemistry , Phytochemicals/economics , Plant Extracts/chemistry , Plant Extracts/economics , Polyphenols/chemistry , Polyphenols/classification , Polyphenols/pharmacology , Terpenes/chemistry , Terpenes/classification , Terpenes/pharmacology
17.
Molecules ; 21(4): 437, 2016 Mar 31.
Article in English | MEDLINE | ID: mdl-27043515

ABSTRACT

Lipo-alkaloid is a kind of C19-norditerpenoid alkaloid usually found in Aconitum species. Structurally, they contain an aconitane skeleton and one or two fatty acid moieties of 3-25 carbon chains with 1-6 unsaturated degrees. Analysis of the lipo-alkaloids in roots of Aconitum carmichaelii resulted in the isolation of six known pure lipo-alkaloids (A1-A6) and a lipo-alkaloid mixture (A7). The mixture shared the same aconitane skeleton of 14-benzoylmesaconine, but their side chains were determined to be 9-hydroxy-octadecadienoic acid, 13-hydroxy-octadecadienoic acid and 10-hydroxy-octadecadienoic acid, respectively, by MS/MS analysis after alkaline hydrolysis. To our knowledge, this is the first time of the reporting of the oxygenated fatty acids as the side chains in naturally-occurring lipo-alkaloids. In order to identify more lipo-alkaloids, a compound database was established based on various combinations between the aconitane skeleton and the fatty acid chain, and then, the identification of lipo-alkaloids was conducted using the database, UHPLC-Q-TOF-MS and MS/MS. Finally, 148 lipo-alkaloids were identified from A. carmichaelii after intensive MS/MS analysis, including 93 potential new compounds and 38 compounds with oxygenated fatty acid moieties.


Subject(s)
Aconitum/chemistry , Alkaloids/chemistry , Fatty Acids/chemistry , Plant Roots/chemistry , Aconitine/analogs & derivatives , Aconitine/chemistry , Alkaloids/classification , Alkaloids/isolation & purification , Chromatography, High Pressure Liquid , Diterpenes/chemistry , Hydrolysis , Molecular Structure , Oxygen/chemistry , Tandem Mass Spectrometry
18.
Fed Regist ; 81(43): 11429-31, 2016 Mar 04.
Article in English | MEDLINE | ID: mdl-26964151

ABSTRACT

The Administrator of the Drug Enforcement Administration is issuing this final order to extend the temporary schedule I status of 10 synthetic cathinones pursuant to the temporary scheduling provisions of the Controlled Substances Act. The 10 substances are: 4-methyl-N-ethylcathinone (4-MEC); 4-methyl-alpha-pyrrolidinopropiophenone (4-MePPP); alpha-pyrrolidinopentiophenone ([alpha]-PVP); 1-(1,3-benzodioxol-5-yl)-2-(methylamino)butan-1-one (butylone); 2-(methylamino)-1-phenylpentan-1-one (pentedrone); 1-(1,3-benzodioxol-5-yl)-2-(methylamino)pentan-1-one (pentylone); 4-fluoro-N-methylcathinone (4-FMC); 3-fluoro-N-methylcathinone (3-FMC); 1-(naphthalen-2-yl)-2-(pyrrolidin-1-yl)pentan-1-one (naphyrone); and alpha-pyrrolidinobutiophenone ([alpha]-PBP) [hereinafter 4-MEC, 4-MePPP, [alpha]-PVP, butylone, pentedrone, pentylone, 4-FMC, 3-FMC, naphyrone, and [alpha]-PBP, respectively], including their optical, positional, and geometric isomers, salts, and salts of isomers. The current final order temporarily placing 4-MEC, 4-MePPP, [alpha]-PVP, butylone, pentedrone, pentylone, 4-FMC, 3-FMC, naphyrone, and [alpha]-PBP into schedule I is in effect through March 6, 2016. This final order will extend the temporary scheduling of 4-MEC, 4-MePPP, [alpha]-PVP, butylone, pentedrone, pentylone, 4-FMC, 3-FMC, naphyrone, and [alpha]-PBP for one year, or until the permanent scheduling action for these 10 substances is completed, whichever occurs first.


Subject(s)
Alkaloids/classification , Central Nervous System Stimulants/classification , Drug and Narcotic Control/legislation & jurisprudence , Psychotropic Drugs/classification , Humans , Illicit Drugs/classification , United States
19.
Mol Biol Evol ; 33(4): 1068-81, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26782998

ABSTRACT

Complex phenotypes typically have a correspondingly multifaceted genetic component. However, the genotype-phenotype association between chemical defense and resistance is often simple: genetic changes in the binding site of a toxin alter how it affects its target. Some toxic organisms, such as poison frogs (Anura: Dendrobatidae), have defensive alkaloids that disrupt the function of ion channels, proteins that are crucial for nerve and muscle activity. Using protein-docking models, we predict that three major classes of poison frog alkaloids (histrionicotoxins, pumiliotoxins, and batrachotoxins) bind to similar sites in the highly conserved inner pore of the muscle voltage-gated sodium channel, Nav1.4. We predict that poison frogs are somewhat resistant to these compounds because they have six types of amino acid replacements in the Nav1.4 inner pore that are absent in all other frogs except for a distantly related alkaloid-defended frog from Madagascar, Mantella aurantiaca. Protein-docking models and comparative phylogenetics support the role of these replacements in alkaloid resistance. Taking into account the four independent origins of chemical defense in Dendrobatidae, phylogenetic patterns of the amino acid replacements suggest that 1) alkaloid resistance in Nav1.4 evolved independently at least seven times in these frogs, 2) variation in resistance-conferring replacements is likely a result of differences in alkaloid exposure across species, and 3) functional constraint shapes the evolution of the Nav1.4 inner pore. Our study is the first to demonstrate the genetic basis of autoresistance in frogs with alkaloid defenses.


Subject(s)
Alkaloids/genetics , NAV1.4 Voltage-Gated Sodium Channel/genetics , Phylogeny , Poisons/chemistry , Alkaloids/chemistry , Alkaloids/classification , Alkaloids/metabolism , Amphibian Venoms/chemistry , Amphibian Venoms/genetics , Amphibian Venoms/metabolism , Animals , Anura/genetics , Batrachotoxins/chemistry , Batrachotoxins/genetics , Batrachotoxins/metabolism , Binding Sites , Genetic Association Studies , Molecular Docking Simulation , NAV1.4 Voltage-Gated Sodium Channel/chemistry , NAV1.4 Voltage-Gated Sodium Channel/metabolism , Poisons/metabolism , Quinolines/chemistry , Quinolines/metabolism , Skin/chemistry , Skin/drug effects
20.
Z Naturforsch C J Biosci ; 71(1-2): 9-14, 2016.
Article in English | MEDLINE | ID: mdl-26756091

ABSTRACT

GC-MS analysis of alkaloid profiles of five Fumaria species, naturally grown in Bulgaria (F. officinalis, F. thuretii, F. kralikii, F. rostellata and F. schrammii) and analysis of acetylcholinesterase inhibitory activity of alkaloid extracts were performed. Fourteen isoquinoline alkaloids were identified, with the principle ones being protopine, cryptopine, sinactine, parfumine, fumariline, fumarophycine, and fumaritine. Protopine contents, defined by HPLC analysis varied between 210.6 ± 8.8 µg/g DW (F. schrammii) and 334.5 ± 7.1 µg/g DW. (F. rostellata). While all of the investigated alkaloid extracts significantly inhibited acetylcholinesterase activity, the F. kralikii demonstrated the highest level of inhibition (IC(50) 0.13 ± 0.01 mg extract/mL).


Subject(s)
Acetylcholinesterase/metabolism , Alkaloids/classification , Alkaloids/pharmacology , Fumaria/chemistry , Alkaloids/chemistry , Alkaloids/isolation & purification , Benzophenanthridines/chemistry , Benzophenanthridines/isolation & purification , Berberine Alkaloids/chemistry , Berberine Alkaloids/isolation & purification , Bulgaria , Cholinesterase Inhibitors/chemistry , Cholinesterase Inhibitors/classification , Cholinesterase Inhibitors/isolation & purification , Cholinesterase Inhibitors/pharmacology , Isoquinolines/chemistry , Isoquinolines/isolation & purification
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