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1.
Biomolecules ; 11(8)2021 08 04.
Article in English | MEDLINE | ID: mdl-34439820

ABSTRACT

Cold-loving microorganisms of all three domains of life have unique and special abilities that allow them to live in harsh environments. They have acquired structural and molecular mechanisms of adaptation to the cold that include the production of anti-freeze proteins, carbohydrate-based extracellular polymeric substances and lipids which serve as cryo- and osmoprotectants by maintaining the fluidity of their membranes. They also produce a wide diversity of pigmented molecules to obtain energy, carry out photosynthesis, increase their resistance to stress and provide them with ultraviolet light protection. Recently developed analytical techniques have been applied as high-throughoutput technologies for function discovery and for reconstructing functional networks in psychrophiles. Among them, omics deserve special mention, such as genomics, transcriptomics, proteomics, glycomics, lipidomics and metabolomics. These techniques have allowed the identification of microorganisms and the study of their biogeochemical activities. They have also made it possible to infer their metabolic capacities and identify the biomolecules that are parts of their structures or that they secrete into the environment, which can be useful in various fields of biotechnology. This Review summarizes current knowledge on psychrophiles as sources of biomolecules and the metabolic pathways for their production. New strategies and next-generation approaches are needed to increase the chances of discovering new biomolecules.


Subject(s)
Adaptation, Physiological/genetics , Anti-Bacterial Agents/biosynthesis , Antifreeze Proteins/biosynthesis , Bacteria/metabolism , Extracellular Polymeric Substance Matrix/metabolism , Metabolic Networks and Pathways/genetics , Antifreeze Proteins/genetics , Arctic Regions , Bacteria/genetics , Bacteria/growth & development , Biotechnology/methods , Chlorophyta/genetics , Chlorophyta/growth & development , Chlorophyta/metabolism , Cold Temperature , Computational Biology/methods , Diatoms/genetics , Diatoms/growth & development , Diatoms/metabolism , Extracellular Polymeric Substance Matrix/genetics , Fungi/genetics , Fungi/growth & development , Fungi/metabolism , Humans , Lipids/biosynthesis , Lipids/genetics , Membrane Fluidity , Metagenome , Pigments, Biological/biosynthesis , Pigments, Biological/genetics
2.
Appl Biochem Biotechnol ; 175(2): 677-86, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25342270

ABSTRACT

Antifreeze proteins are a group of proteins that allow organisms to survive in subzero environments. These proteins possess thermal hysteresis and ice recrystallization inhibition activities. In the present study, we demonstrated the efficiency of a recombinant antifreeze protein from the Arctic yeast Leucosporidium sp. AY30, LeIBP, in cryopreservation of the marine diatom Phaeodactylum tricornutum, which is one of the classical model diatoms and has most widely been studied with regard to its ecology, physiology, biochemistry, and molecular biology. P. tricornutum cells were frozen by either a fast or two-step freezing method in freezing medium containing 10 % dimethyl sulfoxide, glycerol, propylene glycol, and ethylene glycol, respectively, with or without LeIBP supplement. When cells were frozen using the two-step freezing method, cell survival was significantly increased and statistically the same as that of unfrozen native cells in the presence of 0.1 mg/ml LeIBP in 10 % propylene glycol or 10 % ethylene glycol at day 11 of post-thaw culture. In the presence of LeIBP, the concentration of chlorophyll a was dramatically increased to 14-, 48-, 1.6-, and 8.8-fold when cells were frozen in freezing medium containing dimethyl sulfoxide (DMSO), glycerol, propylene glycol (PG), and ethylene glycol (EG), respectively. Scanning electron microscopy observations demonstrated that the cells were also successfully preserved and epitheca or hypotheca were not deformed. These results demonstrate that LeIBP was successfully applied to improve cryopreservation of the marine diatom P. tricornutum.


Subject(s)
Antifreeze Proteins/pharmacology , Basidiomycota/chemistry , Cryopreservation/methods , Cryoprotective Agents/pharmacology , Diatoms/drug effects , Fungal Proteins/pharmacology , Antifreeze Proteins/biosynthesis , Arctic Regions , Cell Survival/drug effects , Chlorophyll/biosynthesis , Chlorophyll A , Cryoprotective Agents/metabolism , Crystallization , Diatoms/physiology , Diatoms/ultrastructure , Dimethyl Sulfoxide/pharmacology , Ethylene Glycol/pharmacology , Fungal Proteins/biosynthesis , Glycerol/pharmacology , Ice/analysis , Oceans and Seas , Propylene Glycol/pharmacology , Recombinant Proteins/biosynthesis , Recombinant Proteins/pharmacology
3.
Sheng Wu Gong Cheng Xue Bao ; 31(8): 1255-65, 2015 Aug.
Article in Chinese | MEDLINE | ID: mdl-26762047

ABSTRACT

Insect antifreeze protein (AFP) has high antifreeze activity. Antifreeze proteins can be used in cryopreservation of biological tissues and cells. We expressed an antifreeze protein from the desert beetle Microdera punctipennis in yeast and determined the function of the protein at low temperatures. Yeast expression vector, pPIC9K-Mpafp698, was constructed and transformed into Pichia pastoris GS115. The expression of MpAFP698 was induced by methanol, and identified by tricine SDS-PAGE and Western blotting. Mpafp698 gene was inserted into the genome of the host yeast strain GS115, and correctly expressed. Hardly any yeast's own protein was secreted into the media. Cryoprotective experiments showed that MpAFP698 can significantly protect mouse liver as well as other mouse organs from cold damage compared with those in the control of Bovine serum albumin (BSA) addition. Besides, the hemolysis of blood cells protected by MpAFP698 at 4 degrees C was reduced and the survival rate of SF9 cells protected by MpAFP698 after freezing and thawing was increased compared to those of the control with BSA addition. Our results showed that MpAFP698 can be expressed in yeast, which allows a convenient purification of the MpAFP protein that has the cryoprotective effect.


Subject(s)
Antifreeze Proteins/biosynthesis , Coleoptera , Cryoprotective Agents/chemistry , Insect Proteins/biosynthesis , Animals , Blotting, Western , Cold Temperature , Electrophoresis, Polyacrylamide Gel , Freezing , Mice , Pichia/metabolism , Sf9 Cells
4.
Gene ; 539(1): 132-40, 2014 Apr 10.
Article in English | MEDLINE | ID: mdl-24502990

ABSTRACT

Antifreeze proteins are a class of polypeptides produced by certain animals, plants, fungi and bacteria that permit their survival under the subzero environments. Ammopiptanthus nanus is the unique evergreen broadleaf bush endemic to the Mid-Asia deserts. It survives at the west edge of the Tarim Basin from the disappearance of the ancient Mediterranean in the Tertiary Period. Its distribution region is characterized by the arid climate and extreme temperatures, where the extreme temperatures range from -30 °C to 40 °C. In the present study, the antifreeze protein gene AnAFP of A. nanus was used to transform Escherichia coli and tobacco, after bioinformatics analysis for its possible function. The transformed E. coli strain expressed the heterologous AnAFP gene under the induction of isopropyl ß-D-thiogalactopyranoside, and demonstrated significant enhancement of cold tolerance. The transformed tobacco lines expressed the heterologous AnAFP gene in response to cold stress, and showed a less change of relative electrical conductivity under cold stress, and a less wilting phenotype after 16 h of -3 °C cold stress and thawing for 1h than the untransformed wild-type plants. All these results imply the potential value of the AnAFP gene to be used in genetic modification of commercially important crops for improvement of cold tolerance.


Subject(s)
Antifreeze Proteins/genetics , Cold-Shock Response/genetics , Escherichia coli/genetics , Fabaceae/genetics , Nicotiana/genetics , Adaptation, Physiological/genetics , Antifreeze Proteins/biosynthesis , Antifreeze Proteins/metabolism , Cold Temperature/adverse effects , Escherichia coli/cytology , Escherichia coli/metabolism , Fabaceae/metabolism , Freezing , Gene Expression Regulation, Plant , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/genetics , Plants, Genetically Modified/growth & development , Promoter Regions, Genetic , Nicotiana/cytology , Nicotiana/metabolism , Transformation, Genetic
5.
Extremophiles ; 17(1): 63-73, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23132550

ABSTRACT

The psychrophilic yeast Glaciozyma antarctica demonstrated high antifreeze activity in its culture filtrate. The culture filtrate exhibited both thermal hysteresis (TH) and ice recrystallization inhibition (RI) properties. The TH of 0.1 °C was comparable to that previously reported for bacteria and fungi. A genome sequence survey of the G. antarctica genome identified a novel antifreeze protein gene. The cDNA encoded a 177 amino acid protein with 30 % similarity to a fungal antifreeze protein from Typhula ishikariensis. The expression levels of AFP1 were quantified via real time-quantitative polymerase chain reaction (RT-qPCR), and the highest expression levels were detected within 6 h of growth at -12 °C. The cDNA of the antifreeze protein was cloned into an Escherichia coli expression system. Expression of recombinant Afp1 in E. coli resulted in the formation of inclusion bodies that were subsequently denatured by treatment with urea and allowed to refold in vitro. Activity assays of the recombinant Afp1 confirmed the antifreeze protein properties with a high TH value of 0.08 °C.


Subject(s)
Antifreeze Proteins , Basidiomycota , Cold Temperature , Fungal Proteins , Gene Expression Regulation, Fungal/physiology , Yeasts , Antifreeze Proteins/biosynthesis , Antifreeze Proteins/chemistry , Antifreeze Proteins/genetics , Antifreeze Proteins/isolation & purification , Basidiomycota/chemistry , Basidiomycota/genetics , Basidiomycota/metabolism , Cloning, Molecular/methods , DNA, Complementary/genetics , Escherichia coli/genetics , Escherichia coli/metabolism , Fungal Proteins/biosynthesis , Fungal Proteins/chemistry , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Sequence Homology, Amino Acid , Yeasts/chemistry , Yeasts/genetics , Yeasts/metabolism
6.
Mol Vis ; 17: 2596-604, 2011.
Article in English | MEDLINE | ID: mdl-22025894

ABSTRACT

PURPOSE: The rainbow smelt (Osmerus mordax), is a teleost fish, which avoids freezing by becoming virtually isosmotic with seawater. The effects that such massive changes in osmolarity have on both its visual system and its highly evolved and specialized circulation are not known. New knowledge about the osmotic adaptation of the rainbow smelt eye is highly relevant to the adaptation and survival of this species and to its ability to feed as a visual predator in the face of environmental pressures. Moreover, the molecular physiologic response of the smelt to osmotic stress might provide valuable insights into understanding and managing mammalian pathological hyperosmolarity conditions, such as diabetes. We undertook the present study to provide an initial assessment of gene expression in ocular vasculature during osmotic adaptation in rainbow smelt. METHODS: Immunohistochemistry with species cross reactive antibodies was used to assess blood vessel protein expression in paraffin sections. Western blotting was used to further verify antibody specificity for orthologs of mammalian blood vessel proteins in rainbow smelt. Thermal hysteresis and the analysis of glycerol concentrations in vitreous fluid were used to assess the physiologic adaptive properties of cold stressed eyes. RESULTS: Glycerol levels and osmotic pressure were significantly increased in the vitreal fluid of smelt maintained at <0.5 °C versus those maintained at 8-10 °C. Compared to the 8-10 °C adapted specimens, the rete mirabile blood vessels and connecting regions of the endothelial linings of the choroidal vessels of the <0.5 °C adapted specimens showed a higher expression level of Tubedown (Tbdn) protein, a marker of the endothelial transcellular permeability pathway. Expression of the zonula occludens protein ZO-1, a marker of the endothelial paracellular permeability pathway showed a reciprocal expression pattern and was downregulated in rete mirabile blood vessels and connecting regions in the endothelial linings of choroidal vessels in <0.5 °C adapted specimens. Smelt orthologs of the mammalian Tbdn and zoluna occludens protein 1 (ZO-1) proteins were also detected by western blotting using anti-mammalian antibodies raised against the same epitopes as those used for immunohistochemistry. CONCLUSIONS: This work provides the first evidence that molecules known to play a role in ocular vascular homeostasis are expressed and may be differentially regulated during anti-freezing cold adaptation in smelt eyes. We propose a hypothesis that in a state of cold-induced hyperosmolarity, changes in ZO-1 expression are associated with the passage of small solutes from the plasma space to ocular fluid, while changes in Tbdn expression regulate the passage of proteins between the ocular fluid and plasma space. This work also provides fundamental insight into the mechanisms underlying the adaptation of the blood-retinal barrier to metabolically relevant compounds such as glycerol.


Subject(s)
Adaptation, Physiological , Antifreeze Proteins/biosynthesis , Aquatic Organisms/physiology , Fish Proteins/biosynthesis , Glycerol/blood , Osmeriformes/physiology , Animals , Antifreeze Proteins/genetics , Biomarkers/metabolism , Blood Vessels/metabolism , Blood-Retinal Barrier/metabolism , Blotting, Western , Cold Temperature , Fish Proteins/genetics , Freezing , Gene Expression Regulation , Immunohistochemistry , Osmolar Concentration , Osmotic Pressure/physiology , Vitreous Body/metabolism
7.
Cryobiology ; 63(3): 164-9, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21878325

ABSTRACT

Insects can increase their resistance to cold stress by prior exposure to non-lethal cold temperatures. Here, we investigated the supercooling capacity and survival of eggs, 3rd and 5th instar larvae, and pupae of Spodoptera exigua (Lepidoptera: Noctuidae) during CA, and responses to various pre-treatment protocols, including constant temperatures, thermoperiods, and RCH, RHH, RCH+RHH and RHH+RCH combined with thermoperiods. Only acclimated eggs demonstrated a significant decrease in SCP, from -20.7±0.3 to -22.9±0.3°C, among all experimental groups compared to non-acclimated stages. Survival increased by 17.5% for eggs, 40.0% and 13.3% for 3rd and 5th instar larvae, and by 20.0% for pupae after CA. Compared to controls, survival of eggs under the conditions of thermoperiod (5:15°C), thermoperiod (5:15°C)+RHH, and thermoperiod (5:15, 10:20, and 15:25°C)+RCH significantly increased. In addition, survival of 3rd and 5th instar larvae and pupae increased under the conditions of thermoperiod (5:15°C) and thermoperiod (5:15°C)+RCH, possibly due to the induction of heat shock proteins or cryoprotectants. However, the pre-treatments of thermoperiod+RCH+RHH and thermoperiod+RHH+RCH did not significantly enhance survival of any developmental stage. These adaptive responses may allow S. exigua to enhance supercooling capacity and survival in response to seasonal or unexpected diurnal decreases in environmental temperatures.


Subject(s)
Acclimatization/physiology , Larva/physiology , Pupa/physiology , Spodoptera/physiology , Animals , Antifreeze Proteins/biosynthesis , Cell Survival , Cold Temperature , Cryoprotective Agents/metabolism , Hot Temperature , Seasons , Time Factors , Zygote
8.
Mol Reprod Dev ; 75(4): 608-13, 2008 Apr.
Article in English | MEDLINE | ID: mdl-17874447

ABSTRACT

The purpose of the present study was to evaluate the cryogenic effect of antifreeze protein (AFP) on transgenic mouse ovaries which is expressed AFP type III from Ocean pout and the production of live offspring by orthotopic transplantation of cryopreserved mouse ovaries. In this study, whole transgenic and nontransgenic mouse ovaries were vitrified with 20% DMSO and 20% EG in M2 medium supplemented with 0.5 M sucrose. All vitrified and toxicity control and fresh ovaries were transplanted orthotopically into ovariectomized recipients bilaterally. For fresh ovaries transplantation, 5 mice delivered litters of 18 and 19 live pups in first and second matings, respectively. For toxicity control of chemicals, 6 mice delivered litters of 22 and 23 live pups. For nontransgenic mouse ovaries (vitrified) transplantation, 7 mice delivered litters of 22 and 23 live pups. For transgenic mouse ovaries (vitrified) transplantation, 10 mice delivered litters of 35 and 37 live pups. Litter sizes from pups of freshly transplanted ovaries were not significantly different from AFP-transplanted transgenic ovaries but those from nontransgenic-transplanted ovaries were significantly different from the AFP-transplanted transgenic ovaries group (P < 0.05). In this study, for the first time, it was shown that the ovarian tissue of AFP transgenic mice was protected from cryopreservation by vitrification. These results demonstrate that a normal reproductive lifespan can be restored by orthotopic transplantation of AFP transgenic-vitrified ovary.


Subject(s)
Antifreeze Proteins/physiology , Cryopreservation , Freezing , Organ Preservation , Ovary/transplantation , Animals , Animals, Newborn , Antifreeze Proteins/biosynthesis , Antifreeze Proteins/genetics , Cryopreservation/methods , Female , Male , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mice, Transgenic , Ovary/cytology , Ovary/metabolism , Perciformes/genetics
9.
J Microbiol Biotechnol ; 18(12): 1919-26, 2008 Dec.
Article in English | MEDLINE | ID: mdl-19131694

ABSTRACT

Statistical experimental designs; involving (i) a fractional factorial design (FFD) and (ii) a central composite design (CCD) were applied to optimize the culture medium constituents for production of a unique antifreeze protein by the Antartic microalgae Chaetoceros neogracile. The results of the FFD suggested that NaCl, KCl, MgCl2, and Na2SiO3 were significant variables that highly influenced the growth rate and biomass production. The optimum culture medium for the production of an antifreeze protein from C. neogracile was found to be Kalleampersandrsquor;s artificial seawater, pH of 7.0ampersandplusmn;0.5, consisting of 28.566 g/l of NaCl, 3.887 g/l of MgCl2, 1.787 g/l of MgSO4, 1.308 g/l of CaSO4, 0.832 g/l of K2SO4, 0.124 g/l of CaCO3, 0.103 g/l of KBr, 0.0288 g/l of SrSO4, and 0.0282 g/l of H3BO3. The antifreeze activity significantly increased after cells were treated with cold shock (at -5oC) for 14 h. To the best of our knowledge, this is the first report demonstrating an antifreeze-like protein of C. neogracile.


Subject(s)
Algal Proteins/biosynthesis , Antifreeze Proteins/biosynthesis , Culture Media/chemistry , Diatoms/growth & development , Diatoms/metabolism , Models, Statistical , Algal Proteins/chemistry , Antarctic Regions , Antifreeze Proteins/chemistry , Biomass , Chlorophyll/metabolism , Chlorophyll A , Data Interpretation, Statistical , Models, Biological , Nitrates/metabolism , Reproducibility of Results , Research Design , Seawater/chemistry
10.
Z Naturforsch C J Biosci ; 62(7-8): 583-91, 2007.
Article in English | MEDLINE | ID: mdl-17913077

ABSTRACT

Freezing injury and disease are both restrictive factors in crop production. In order to improve the tolerance ability to these stresses, a better way is to carry out genetic engineering by transferring dualfunctional genes. A predicted rice antifreeze glycopeptide gene was purposefully selected from rice blast-induced cDNA library. Northern blot demonstrated that the gene is expressed not only in blast-infected rice leaves, but also in low temperature-treated rice. In addition, the expressed protein in Escherichia coli exhibits strong antifreeze activities. The gene was overexpressed in rice plants transformed via Agrobacterium tumefacient EHA105. Overall 112 T0 transformants were obtained in this research. Cold tolerance and disease resistance of T1 transformants were, respectively, investigated. The results showed that plants containing overexpressed transgene can withstand -1 degrees C for 24 h without severe chilling injury after thawed, and that disease symptoms of the parallel transformants are highly reduced in response to blast infection, when compared with controls. The relationship of the gene and several pathogenesis-related protein genes to be chosen was analyzed and discussed. All these results confirmed the dual role of the cloned gene, and implied that genetic engineering using this kind of gene is a promising method to reduce biotic and abiotic stresses.


Subject(s)
Antifreeze Proteins/biosynthesis , Glycopeptides/biosynthesis , Immunity, Innate , Magnaporthe/growth & development , Oryza/metabolism , Plants, Genetically Modified/metabolism , Cold Temperature , Magnaporthe/pathogenicity , Open Reading Frames , Oryza/genetics , Oryza/microbiology , Plant Diseases/microbiology , Plant Proteins/genetics , Polymerase Chain Reaction , Recombinant Proteins/biosynthesis
11.
Am J Physiol Regul Integr Comp Physiol ; 293(1): R474-81, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17379844

ABSTRACT

The tissue-specific changes in protein synthesis were tracked in relation to the seasonal metabolic depression in cunner (Tautogolabrus adsperus). In vivo protein synthesis rate and total RNA content were determined in liver, white muscle, brain, heart, and gill during periods of normal activity before metabolic depression, entrance into and during winter dormancy, and during the recovery period. The decrease in water temperature from 8 degrees C to 4 degrees C was accompanied by a 55% depression of protein synthesis in liver, brain, and heart and a 66% depression in gill. Protein synthesis in white muscle fell below detectable levels at this temperature. The depression of protein synthesis is an active process (Q(10) = 6-21 between 8 degrees C and 4 degrees C) that occurs in advance of the behavioral and physiological depression at the whole animal level. Protein synthesis was maintained at these depressed levels in white muscle, brain, heart, and gill until water temperature returned to 4 degrees C in the spring. Liver underwent a hyperactivation in the synthesis of proteins at 0 degrees C, which may be linked to antifreeze production. During the recovery period, a hyperactivation of protein synthesis occurred in white muscle, which is suggestive of compensatory growth, as well as in heart and liver, which is considered to be linked to increased activity and feeding. Seasonal changes in total RNA content demonstrate the depression of protein synthesis with decreasing temperature to be closely associated with translational capacity, but the stimulation of protein synthesis during recovery appears to be associated with increased translational efficiency.


Subject(s)
Fishes/metabolism , Fishes/physiology , Metabolism/physiology , Proteins/metabolism , Seasons , Animals , Antifreeze Proteins/biosynthesis , Cold Temperature , Kinetics , Phenylalanine/blood , Phenylalanine/metabolism , Protein Modification, Translational/physiology , RNA/biosynthesis , Tissue Distribution
13.
Proc Natl Acad Sci U S A ; 103(27): 10491-10496, 2006 Jul 05.
Article in English | MEDLINE | ID: mdl-16798878

ABSTRACT

Phylogenetically diverse polar and subpolar marine teleost fishes have evolved antifreeze proteins (AFPs) or antifreeze glycoproteins (AFGPs) to avoid inoculative freezing by internalized ice. For over three decades since the first fish antifreeze (AF) protein was discovered, many studies of teleost freezing avoidance showed hepatic AF synthesis and distribution within the circulation as pivotal in preventing the blood, and therefore the fish, from freezing. We have uncovered an important twist to this long-held paradigm: the complete absence of liver synthesis of AFGPs in any life stage of the Antarctic notothenioids, indicating that the liver plays no role in the freezing avoidance in these fishes. Instead, we found the exocrine pancreas to be the major site of AFGP synthesis and secretion in all life stages, and that pancreatic AFGPs enter the intestinal lumen via the pancreatic duct to prevent ingested ice from nucleating the hyposmotic intestinal fluids. AFGPs appear to remain undegraded in the intestinal milieu, and the composition and relative abundance of intestinal AFGP isoforms are nearly identical to serum AFGPs. Thus, the reabsorption of intact pancreas-derived intestinal AFGPs, and not the liver, is the likely source of circulatory AFGPs in notothenioid fishes. We examined diverse northern fish taxa and Antarctic eelpouts with hepatic synthesis of bloodborne AF and found that they also express secreted pancreatic AF of their respective types. The evolutionary convergence of this functional physiology underscores the hitherto largely unrecognized importance of intestinal freezing prevention in polar teleost freezing avoidance, especially in the chronically icy Antarctic waters.


Subject(s)
Antifreeze Proteins/biosynthesis , Cold Climate , Fishes/anatomy & histology , Fishes/metabolism , Glycoproteins/biosynthesis , Pancreas/metabolism , Animals , Antarctic Regions , Antifreeze Proteins/genetics , Fishes/genetics , Freezing , Gastrointestinal Tract/metabolism , Glycoproteins/genetics , Larva/metabolism , Liver/metabolism , Molecular Sequence Data , Organ Specificity , Osmotic Pressure
14.
Ying Yong Sheng Tai Xue Bao ; 17(3): 551-6, 2006 Mar.
Article in Chinese | MEDLINE | ID: mdl-16724761

ABSTRACT

Anti-freezing proteins (AFPs) are the new type of proteins isolated from overwintering plants, which involve in the plant responses to low temperature stress. AFPs have multiple hydrophilic ice-binding domains, which can inhibit the growth and recrystallization of ice in intercellular spaces. Some AFPs are homologous to the pathogenesis-related proteins, and function with two activities, i. e., anti-freezing and disease-resistance. The expression and accumulation of AFPs are controlled by developmental regulation and transcriptional factors, and affected by low temperature, short day length, dehydration, and ethylene. The heterologous over-expression of genes encoding AFPs in freezing-sensitive plants can enhance the freezing resistance of host plants. In this paper, the research advances in plant AFPs' characters and their identification, mechanisms of freezing resistance and their regulation,


Subject(s)
Adaptation, Physiological , Antifreeze Proteins/metabolism , Plants/metabolism , Antifreeze Proteins/biosynthesis , Antifreeze Proteins/genetics , Cold Temperature , Gene Expression Regulation, Plant , Plants/genetics , Temperature
15.
Protein Expr Purif ; 48(2): 243-52, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16542851

ABSTRACT

The Tenebrio molitor thermal hysteresis protein has a cysteine content of 19%. This 84-residue protein folds as a compact beta-helix, with eight disulfide bonds buried in its core. Exposed on one face of the protein is an array of threonine residues, which constitutes the ice-binding face. Previous protocols for expression of this protein in recombinant expression systems resulted in inclusion bodies or soluble but largely inactive material. A long and laborious refolding procedure was performed to increase the fraction of active protein and isolate it from inactive fractions. We present a new protocol for production of fully folded and active T. molitor thermal hysteresis protein in bacteria, without the need for in vitro refolding. The protein coding sequence was fused to those of various carrier proteins and expressed at low temperature in a bacterial strain specially suited for production of disulfide-bonded proteins. The product, after a simple and robust purification procedure, was analyzed spectroscopically and functionally and was found to compare favorably to previously published data on refolded protein and protein obtained from its native source.


Subject(s)
Antifreeze Proteins/chemistry , Antifreeze Proteins/metabolism , Disulfides/chemistry , Escherichia coli/genetics , Gene Expression , Protein Folding , Tenebrio/chemistry , Amino Acid Sequence , Animals , Antifreeze Proteins/biosynthesis , Antifreeze Proteins/genetics , Molecular Sequence Data , Protein Structure, Secondary , Tenebrio/genetics
16.
Insect Biochem Mol Biol ; 36(3): 210-8, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16503482

ABSTRACT

Not surprisingly, in the spruce budworm, Choristoneura fumiferana, antifreeze protein (AFP) gene expression is most abundant in the second instar, overwintering stage. However, low level RNA and protein expression was also found in the sixth instar larvae, a summer stage. In situ hybridization further confirmed the presence of AFP mRNA in sixth instar midgut tissues. Sequencing of cDNAs corresponding to "summer-expressed" transcripts revealed an isoform that was not apparent in a cDNA library made to second instar larvae. Although similar to AFP cDNAs obtained from overwintering larvae, this AFP-like isoform (CfAFP6) has two Cys substitutions. Since AFPs from this species fold into a beta-helix that is stabilized by disulfide bonds, it was of interest to determine if this summer-expressed isoform had AFP activity. No thermal hysteresis activity was found when CfAFP6 was cloned and expressed in E. coli, even after in vitro denaturation and refolding. As well, there was no activity detected when the sequence of a known, active isoform was changed to mimic the Cys substitutions in CfAFP6. Since CfAFP6 does not appear to contribute to freeze resistance, its apparent absence in the overwintering second instar should not in itself be considered curious.


Subject(s)
Antifreeze Proteins/biosynthesis , Digestive System/embryology , Gene Expression Regulation, Developmental/physiology , Insect Proteins/biosynthesis , Moths/embryology , Adaptation, Physiological/physiology , Animals , Antifreeze Proteins/genetics , Insect Proteins/genetics , Larva/genetics , Larva/metabolism , Moths/genetics , Protein Isoforms/biosynthesis , Protein Isoforms/genetics , RNA, Messenger/biosynthesis , RNA, Messenger/genetics , Seasons
17.
Protein Expr Purif ; 47(1): 152-61, 2006 May.
Article in English | MEDLINE | ID: mdl-16290006

ABSTRACT

Certain freeze-intolerant insects produce antifreeze proteins (AFPs) during overwintering including the spruce budworm (Choristoneura fumiferana) and yellow mealworm (Tenebrio molitor) AFP gene families. However, only a few of the isoforms, encoded by their multiple-copy gene families, have been characterized. When expressed in bacterial systems the insect AFPs have to be denatured and refolded in vitro, a procedure that is not uniformly successful, presumably due to the beta-helix structure and the requirement for disulfide bonds. In an attempt to overcome these difficulties, bacterial vectors and hosts that have been developed to produce soluble, folded proteins, as well as a yeast expression system (Pichia pastoris) were employed. Bacterial expression resulted in low quantities of active recombinant protein for certain isoforms. In contrast, both small and large-scale fermentation of recombinant AFP in Pichia yielded substantial protein production (100 mg/L) but functional ice binding activity of protein produced in three different transformed yeast strains (KM71, X33 or GS115) was low. Inappropriate O-linked glycosylation of the Thr-rich AFPs appeared to be partially reversed by mild chemical deglycosylation, but activity remained low. Substantial quantities, as well as activity were recovered when a fish AFP, with disulfide bonds, but without potential Thr glycosylation sites was expressed in the yeast system.


Subject(s)
Antifreeze Proteins/chemistry , Antifreeze Proteins/genetics , Cloning, Molecular , Disulfides/chemistry , Gene Expression Regulation, Bacterial/genetics , Gene Expression Regulation, Fungal/genetics , Threonine/metabolism , Animals , Antifreeze Proteins/biosynthesis , Coleoptera/genetics , Escherichia coli/genetics , Moths/genetics , Multigene Family , Pichia/genetics , Protein Isoforms/biosynthesis , Protein Isoforms/chemistry , Protein Isoforms/genetics , Tenebrio/genetics
18.
Comp Biochem Physiol B Biochem Mol Biol ; 139(3): 347-57, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15544960

ABSTRACT

The rainbow smelt (Osmerus mordax) is a small anadromous fish that actively feeds under the ice at temperatures as low as the freeze point of seawater. Freezing is avoided through the production of both non-colligative antifreeze protein (AFP) and glycerol that acts in a colligative manner. Glycerol is constantly lost across the gills and skin, thus glycerol production must continue on a sustained basis at low winter temperatures. AFP begins to accumulate in early fall while water temperatures are still high. Glycerol production is triggered when water temperatures decrease to about 5 degrees C. Glycerol levels rapidly increase with carbon flow from dihydroxyacetone phosphate (DHAP) to glycerol 3-phosphate (G3P) to glycerol. Glucose/glycogen serves as the initial carbon source for glycerol accumulation with amino acids contributing thereafter. The period of glycerol accumulation is associated with increases in GPDH mRNA and PEPCK mRNA followed by elevations in protein synthesis and enzyme activities. Plasma glycerol levels may reach in excess of 500 mM in winter. The high freeze resistance allows rainbow smelt to invade water of low temperature and forage for food. The lower the temperature, the higher the glycerol must be, and the higher the glycerol the greater the loss to the environment through diffusion. During the winter, rainbow smelt feed upon protein rich invertebrates with glycerol production being fueled in part by dietary amino acids via the gluconeogenic pathway. At winter temperatures, glycerol is quantitatively more important than AFP in providing freeze resistance of blood; however, the importance of AFPs to other tissues is yet to be assessed. Glycerol levels rapidly plummet in the spring when water temperature is still close to 0 degrees C. During this period, freeze resistance must be provided by AFP alone. Overall, the phenomenon of glycerol production by rainbow smelt reveals an elegant connection of biochemistry to ecology that allows this species to exploit an otherwise unavailable food resource.


Subject(s)
Antifreeze Proteins/biosynthesis , Freezing , Glycerol/metabolism , Osmeriformes/metabolism , Seasons , Animals , Temperature
19.
Physiol Biochem Zool ; 77(3): 415-22, 2004.
Article in English | MEDLINE | ID: mdl-15286915

ABSTRACT

Rainbow smelt (Osmerus mordax) inhabit inshore waters along the North American Atlantic coast. During the winter, these waters are frequently ice covered and can reach temperatures as low as -1.9 degrees C. To prevent freezing, smelt accumulate high levels of glycerol, which lower the freezing point via colligative means, and antifreeze proteins (AFP). The up-regulation of the antifreeze response (both glycerol and AFP) occurs in early fall, when water temperatures are 5 degrees -6 degrees C. The accumulation of glycerol appears to be the main mechanism of freeze resistance in smelt because it contributes more to the lowering of the body's freezing point than the activity of the AFP (0.5 degrees C vs. 0.25 degrees C for glycerol and AFP, respectively) at a water temperature of -1.5 degrees C. Moreover, AFP in smelt appears to be a safeguard mechanism to prevent freezing when glycerol levels are low. Significant increases in activities of the liver enzymes glycerol 3-phosphate dehydrogenase (GPDH), alanine aminotransferase (AlaAT), and phosphoenolpyruvate carboxykinase (PEPCK) during the initiation of glycerol production and significant correlations between enzyme activities and plasma glycerol levels suggest that these enzymes are closely associated with the synthesis and maintenance of elevated glycerol levels for use as an antifreeze. These findings add further support to the concept that carbon for glycerol is derived from amino acids.


Subject(s)
Antifreeze Proteins/biosynthesis , Freezing , Glycerol/metabolism , Liver/enzymology , Osmeriformes/metabolism , Seasons , Alanine Transaminase/metabolism , Analysis of Variance , Animals , Fresh Water , Glycerol/blood , Glycerolphosphate Dehydrogenase/metabolism , Newfoundland and Labrador , Phosphoenolpyruvate Carboxykinase (ATP)/metabolism , Regression Analysis , Temperature
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