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1.
Methods Mol Biol ; 2524: 223-233, 2022.
Article in English | MEDLINE | ID: mdl-35821475

ABSTRACT

Reverse genetics systems provide a powerful tool to generate recombinant arenavirus expressing reporters to facilitate the investigation of the arenavirus life cycle and also for the discovery of antiviral countermeasures. The plasmid-encoded viral ribonucleoprotein components initiate the transcription and replication of a plasmid-driven full-length viral genome, resulting in infectious virus. Thereby, this approach is ideal for the generation of recombinant arenaviruses expressing reporter genes that can be used as valid surrogates for virus replication. By splitting the small viral segment (S) into two viral segments (S1 and S2), each of them encoding a reporter gene, recombinant tri-segmented arenavirus can be rescued. Bi-reporter-expressing recombinant tri-segmented arenaviruses represent an excellent tool to study the biology of arenaviruses, including the identification and characterization of both prophylactic and therapeutic countermeasures for the treatment of arenaviral infections. In this chapter, we describe a detailed protocol on the generation and in vitro characterization of recombinant arenaviruses containing a tri-segment genome expressing two reporter genes based on the prototype member in the family, lymphocytic choriomeningitis virus (LCMV). Similar experimental approaches can be used for the generation of bi-reporter-expressing tri-segment recombinant viruses for other members in the arenavirus family.


Subject(s)
Arenaviridae Infections , Reverse Genetics , Arenaviridae Infections/genetics , Arenaviridae Infections/prevention & control , Genes, Reporter , Humans , Lymphocytic choriomeningitis virus/genetics , Reverse Genetics/methods , Virus Replication/genetics
2.
Front Immunol ; 13: 782441, 2022.
Article in English | MEDLINE | ID: mdl-35185882

ABSTRACT

CD8+ T cells play a crucial role in the control and resolution of viral infections and can adopt a wide range of phenotypes and effector functions depending on the inflammatory context and the duration and extent of antigen exposure. Similarly, viral infections can exert diverse selective pressures on populations of clonally related T cells. Technical limitations have nevertheless made it challenging to investigate the relationship between clonal selection and transcriptional phenotypes of virus-specific T cells. We therefore performed single-cell T cell receptor (TCR) repertoire and transcriptome sequencing of virus-specific CD8 T cells in murine models of acute, chronic and latent infection. We observed clear infection-specific populations corresponding to memory, effector, exhausted, and inflationary phenotypes. We further uncovered a mouse-specific and polyclonal T cell response, despite all T cells sharing specificity to a single viral epitope, which was accompanied by stereotypic TCR germline gene usage in all three infection types. Persistent antigen exposure during chronic and latent viral infections resulted in a higher proportion of clonally expanded T cells relative to acute infection. We furthermore observed a relationship between transcriptional heterogeneity and clonal expansion for all three infections, with highly expanded clones having distinct transcriptional phenotypes relative to less expanded clones. Together our work relates clonal selection to gene expression in the context of viral infection and further provides a dataset and accompanying software for the immunological community.


Subject(s)
Arenaviridae Infections/immunology , CD8-Positive T-Lymphocytes/immunology , Lymphocytic choriomeningitis virus/immunology , Receptors, Antigen, T-Cell/genetics , Transcriptome , Acute Disease , Animals , Arenaviridae Infections/genetics , Arenaviridae Infections/metabolism , Arenaviridae Infections/virology , CD8-Positive T-Lymphocytes/metabolism , CD8-Positive T-Lymphocytes/virology , Chronic Disease , Clone Cells/metabolism , Disease Models, Animal , Female , Latent Infection , Lymphocytic choriomeningitis virus/pathogenicity , Mice , Mice, Inbred C57BL , Phenotype , Receptors, Antigen, T-Cell/immunology , Receptors, Antigen, T-Cell/metabolism , Virus Diseases
3.
J Exp Med ; 218(10)2021 10 04.
Article in English | MEDLINE | ID: mdl-34398180

ABSTRACT

Several RNA viruses can establish life-long persistent infection in mammalian hosts, but the fate of individual virus-infected cells remains undefined. Here we used Cre recombinase-encoding lymphocytic choriomeningitis virus to establish persistent infection in fluorescent cell fate reporter mice. Virus-infected hepatocytes underwent spontaneous noncytolytic viral clearance independently of type I or type II interferon signaling or adaptive immunity. Viral clearance was accompanied by persistent transcriptomic footprints related to proliferation and extracellular matrix remodeling, immune responses, and metabolism. Substantial overlap with persistent epigenetic alterations in HCV-cured patients suggested a universal RNA virus-induced transcriptomic footprint. Cell-intrinsic clearance occurred in cell culture, too, with sequential infection, reinfection cycles separated by a period of relative refractoriness to infection. Our study reveals that systemic persistence of a prototypic noncytolytic RNA virus depends on continuous spread and reinfection. Yet undefined cell-intrinsic mechanisms prevent viral persistence at the single-cell level but give way to profound transcriptomic alterations in virus-cleared cells.


Subject(s)
Arenaviridae Infections/genetics , Arenaviridae Infections/virology , Hepatocytes/virology , Lymphocytic choriomeningitis virus/pathogenicity , Adaptive Immunity , Animals , Arenaviridae Infections/pathology , Chlorocebus aethiops , Gene Expression Profiling , HEK293 Cells , Humans , Interferons/metabolism , Lymphocytic choriomeningitis virus/genetics , Mice, Transgenic , Reinfection , Single-Cell Analysis , Vero Cells , Viral Load , Viral Proteins/metabolism
4.
Nat Immunol ; 22(4): 434-448, 2021 04.
Article in English | MEDLINE | ID: mdl-33649580

ABSTRACT

T cells dynamically interact with multiple, distinct cellular subsets to determine effector and memory differentiation. Here, we developed a platform to quantify cell location in three dimensions to determine the spatial requirements that direct T cell fate. After viral infection, we demonstrated that CD8+ effector T cell differentiation is associated with positioning at the lymph node periphery. This was instructed by CXCR3 signaling since, in its absence, T cells are confined to the lymph node center and alternatively differentiate into stem-like memory cell precursors. By mapping the cellular sources of CXCR3 ligands, we demonstrated that CXCL9 and CXCL10 are expressed by spatially distinct dendritic and stromal cell subsets. Unlike effector cells, retention of stem-like memory precursors in the paracortex is associated with CCR7 expression. Finally, we demonstrated that T cell location can be tuned, through deficiency in CXCL10 or type I interferon signaling, to promote effector or stem-like memory fates.


Subject(s)
Arenaviridae Infections/metabolism , CD8-Positive T-Lymphocytes/metabolism , Cell Differentiation , Chemokine CXCL10/metabolism , Chemokine CXCL9/metabolism , Immunologic Memory , Lymph Nodes/metabolism , Precursor Cells, T-Lymphoid/metabolism , Receptors, CXCR3/metabolism , Animals , Arenaviridae Infections/genetics , Arenaviridae Infections/immunology , Arenaviridae Infections/virology , CD8-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/virology , Cell Lineage , Cells, Cultured , Chemokine CXCL10/genetics , Chemokine CXCL9/genetics , Chemotaxis, Leukocyte , Dendritic Cells/immunology , Dendritic Cells/metabolism , Disease Models, Animal , Host-Pathogen Interactions , Interferon Type I/metabolism , Ligands , Lymph Nodes/immunology , Lymph Nodes/virology , Lymphocytic choriomeningitis virus/immunology , Lymphocytic choriomeningitis virus/pathogenicity , Mice, Inbred C57BL , Mice, Knockout , Phenotype , Precursor Cells, T-Lymphoid/immunology , Precursor Cells, T-Lymphoid/virology , Receptor, Interferon alpha-beta/genetics , Receptor, Interferon alpha-beta/metabolism , Receptors, CCR7/metabolism , Receptors, CXCR3/genetics , Signal Transduction , Stem Cell Niche , Stromal Cells/immunology , Stromal Cells/metabolism
5.
Nat Immunol ; 22(3): 370-380, 2021 03.
Article in English | MEDLINE | ID: mdl-33574619

ABSTRACT

During chronic infection and cancer, a self-renewing CD8+ T cell subset maintains long-term immunity and is critical to the effectiveness of immunotherapy. These stem-like CD8+ T cells diverge from other CD8+ subsets early after chronic viral infection. However, pathways guarding stem-like CD8+ T cells against terminal exhaustion remain unclear. Here, we show that the gene encoding transcriptional repressor BACH2 is transcriptionally and epigenetically active in stem-like CD8+ T cells but not terminally exhausted cells early after infection. BACH2 overexpression enforced stem-like cell fate, whereas BACH2 deficiency impaired stem-like CD8+ T cell differentiation. Single-cell transcriptomic and epigenomic approaches revealed that BACH2 established the transcriptional and epigenetic programs of stem-like CD8+ T cells. In addition, BACH2 suppressed the molecular program driving terminal exhaustion through transcriptional repression and epigenetic silencing. Thus, our study reveals a new pathway that enforces commitment to stem-like CD8+ lineage and prevents an alternative terminally exhausted cell fate.


Subject(s)
Arenaviridae Infections/metabolism , Basic-Leucine Zipper Transcription Factors/metabolism , CD8-Positive T-Lymphocytes/metabolism , Cell Differentiation , Epigenesis, Genetic , Precursor Cells, T-Lymphoid/metabolism , Transcription, Genetic , Animals , Arenaviridae Infections/genetics , Arenaviridae Infections/immunology , Arenaviridae Infections/virology , Basic-Leucine Zipper Transcription Factors/deficiency , Basic-Leucine Zipper Transcription Factors/genetics , CD8-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/virology , Cell Lineage , Cells, Cultured , Chronic Disease , Disease Models, Animal , Host-Pathogen Interactions , Lymphocytic choriomeningitis virus/immunology , Lymphocytic choriomeningitis virus/pathogenicity , Mice, Inbred C57BL , Mice, Knockout , Phenotype , Precursor Cells, T-Lymphoid/immunology , Precursor Cells, T-Lymphoid/virology , Signal Transduction
6.
PLoS Pathog ; 16(10): e1008948, 2020 10.
Article in English | MEDLINE | ID: mdl-33045019

ABSTRACT

Pathogenicity often differs dramatically among even closely related arenavirus species. For instance, Junín virus (JUNV), the causative agent of Argentine hemorrhagic fever (AHF), is closely related to Tacaribe virus (TCRV), which is normally avirulent in humans. While little is known about how host cell pathways are regulated in response to arenavirus infection, or how this contributes to virulence, these two viruses have been found to differ markedly in their ability to induce apoptosis. However, details of the mechanism(s) governing the apoptotic response to arenavirus infections are unknown. Here we confirm that TCRV-induced apoptosis is mitochondria-regulated, with associated canonical hallmarks of the intrinsic apoptotic pathway, and go on to identify the pro- and anti-apoptotic Bcl-2 factors responsible for regulating this process. In particular, levels of the pro-apoptotic BH3-only proteins Noxa and Puma, as well as their canonical transcription factor p53, were strongly increased. Interestingly, TCRV infection also led to the accumulation of the inactive phosphorylated form of another pro-apoptotic BH3-only protein, Bad (i.e. as phospho-Bad). Knockout of Noxa or Puma suppressed apoptosis in response to TCRV infection, whereas silencing of Bad increased apoptosis, confirming that these factors are key regulators of apoptosis induction in response to TCRV infection. Further, we found that while the highly pathogenic JUNV does not induce caspase activation, it still activated upstream pro-apoptotic factors, consistent with current models suggesting that JUNV evades apoptosis by interfering with caspase activation through a nucleoprotein-mediated decoy function. This new mechanistic insight into the role that individual BH3-only proteins and their regulation play in controlling apoptotic fate in arenavirus-infected cells provides an important experimental framework for future studies aimed at dissecting differences in the apoptotic responses between arenaviruses, their connection to other cell signaling events and ultimately the relationship of these processes to pathogenesis.


Subject(s)
Apoptosis Regulatory Proteins/metabolism , Apoptosis , Arenaviridae Infections/pathology , Arenaviruses, New World/physiology , Proto-Oncogene Proteins c-bcl-2/metabolism , Proto-Oncogene Proteins/metabolism , Virus Replication , bcl-Associated Death Protein/metabolism , Apoptosis Regulatory Proteins/genetics , Arenaviridae Infections/genetics , Arenaviridae Infections/metabolism , Arenaviridae Infections/virology , Gene Expression Regulation , Host-Pathogen Interactions , Humans , Protein Domains , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins c-bcl-2/genetics , bcl-Associated Death Protein/genetics
7.
Proc Natl Acad Sci U S A ; 117(32): 19497-19506, 2020 08 11.
Article in English | MEDLINE | ID: mdl-32719120

ABSTRACT

Understanding the genetics of susceptibility to infectious agents is of great importance to our ability to combat disease. Here, we show that voltage-gated calcium channels (VGCCs) are critical for cellular binding and entry of the New World arenaviruses Junín and Tacaribe virus, suggesting that zoonosis via these receptors could occur. Moreover, we demonstrate that α1s haploinsufficiency renders cells and mice more resistant to infection by these viruses. In addition to being more resistant to infection, haploinsufficient cells and mice required a lower dosage of VGCC antagonists to block infection. These studies underscore the importance of genetic variation in susceptibility to both viruses and pharmaceutics.


Subject(s)
Arenaviridae Infections/genetics , Calcium Channels, L-Type/genetics , Disease Resistance/genetics , Animals , Arenaviridae Infections/drug therapy , Arenaviruses, New World/physiology , Calcium Channel Agonists/pharmacology , Calcium Channel Agonists/therapeutic use , Calcium Channel Blockers/pharmacology , Calcium Channel Blockers/therapeutic use , Calcium Channels, L-Type/deficiency , Calcium Channels, L-Type/metabolism , Cells, Cultured , Dose-Response Relationship, Drug , Heterozygote , Humans , Mice , Mice, Mutant Strains , Mutation , Virus Attachment/drug effects , Virus Internalization/drug effects
8.
Front Immunol ; 11: 986, 2020.
Article in English | MEDLINE | ID: mdl-32547546

ABSTRACT

CD8 T cells play a crucial role in providing protection from viral infections. It has recently been established that a subset of CD8 T cells expressing Tcf1 are responsible for sustaining exhausted T cells during chronic lymphocytic choriomeningitis virus (LCMV) infection. Many of these studies, however, have been performed using T cell receptor (TCR) transgenic mice, in which CD8 T cells express a monoclonal TCR specific for the LCMV glycoprotein. To investigate whether the Tcf1+ and Tcf1- repertoires are naturally composed of similar or different clones in wild-type mice exposed to acute or chronic LCMV infection, we performed TCR repertoire sequencing of virus-specific CD8 T cells, including Tcf1+ and Tcf1- populations. Our analysis revealed that the Tcf1+ TCR repertoire is maintained at an equal or higher degree of clonal diversity despite harboring fewer cells. Additionally, within the same animal, there was extensive clonal overlap between the Tcf1+ and Tcf1- repertoires in both chronic and acute LCMV infection. We could further detect these virus-specific clones in longitudinal blood samples earlier in the infection. With respect to common repertoire parameters (clonal overlap, germline gene usage, and clonal expansion), we found minor differences between the virus-specific TCR repertoire of acute and chronic LCMV infection 40 days post infection. Overall, our results indicate that the Tcf1+ population emerging during chronic LCMV infection is not clonally distinct from the Tcf1- population, supporting the notion that the Tcf1+ pool is indeed a fuel for the more exhausted Tcf1- population within the heterogenous repertoire of LCMV-specific CD8 T cells.


Subject(s)
Arenaviridae Infections/immunology , CD8-Positive T-Lymphocytes/immunology , Gene Expression Profiling , Lymphocytic choriomeningitis virus/immunology , Receptors, Antigen, T-Cell/genetics , Transcriptome , Acute Disease , Animals , Arenaviridae Infections/genetics , Arenaviridae Infections/metabolism , Arenaviridae Infections/virology , CD8-Positive T-Lymphocytes/metabolism , CD8-Positive T-Lymphocytes/virology , Chronic Disease , Disease Models, Animal , Female , Hepatocyte Nuclear Factor 1-alpha/deficiency , Hepatocyte Nuclear Factor 1-alpha/genetics , Lymphocytic choriomeningitis virus/pathogenicity , Mice, Knockout , Phenotype , Receptors, Antigen, T-Cell/immunology , Receptors, Antigen, T-Cell/metabolism , Time Factors
9.
J Virol ; 93(22)2019 11 15.
Article in English | MEDLINE | ID: mdl-31462569

ABSTRACT

Several mammarenaviruses can cause deadly hemorrhagic fever infections in humans, with limited preventative and therapeutic measures available. Arenavirus cell entry is mediated by the viral glycoprotein (GP) complex, which consists of the stable signal peptide (SSP), the receptor-binding subunit GP1, and the transmembrane subunit GP2. The GP2 cytoplasmic tail (CT) is relatively conserved among arenaviruses and is known to interact with the SSP to regulate GP processing and membrane fusion, but its biological role in the context of an infectious virus has not been fully characterized. Using a Pichinde virus (PICV) GP expression vector and a PICV reverse genetics system, we systematically characterized the functional roles of 12 conserved residues within the GP2 CT in GP processing, trafficking, assembly, and fusion, as well as in viral replication. Except for P478A and K505A R508A, alanine substitutions at conserved residues abolished GP processing and membrane fusion in plasmid-transfected cells. Six invariant H and C residues and W503 are essential for viral replication, as evidenced by the fact that their mutant viruses could not be rescued. Both P480A and R482A mutant viruses were rescued, grew similarly to wild-type (WT) virus, and produced evidently processed GP1 and GP2 subunits in virus-infected cells, despite the fact that the same mutations abolished GP processing and membrane fusion in a plasmid-based protein expression system, illustrating the importance of using an infectious-virus system for analyzing viral glycoprotein function. In summary, our results demonstrate an essential biological role of the GP2 CT in arenavirus replication and suggest it as a potential novel target for developing antivirals and/or attenuated viral vaccine candidates.IMPORTANCE Several arenaviruses, such as Lassa virus (LASV), can cause severe and lethal hemorrhagic fever diseases with high mortality and morbidity, for which no FDA-approved vaccines or therapeutics are available. Viral entry is mediated by the arenavirus GP complex, which consists of the stable signal peptide (SSP), the receptor-binding subunit GP1, and the transmembrane subunit GP2. The cytoplasmic tail (CT) of GP2 is highly conserved among arenaviruses, but its functional role in viral replication is not completely understood. Using a reverse genetics system of a prototypic arenavirus, Pichinde virus (PICV), we show that the GP2 CT contains certain conserved residues that are essential for virus replication, implicating it as a potentially good target for developing antivirals and live-attenuated viral vaccines against deadly arenavirus pathogens.


Subject(s)
Glycoproteins/metabolism , Pichinde virus/genetics , Viral Envelope Proteins/genetics , A549 Cells , Amino Acid Substitution/genetics , Animals , Arenaviridae , Arenaviridae Infections/genetics , Arenaviridae Infections/metabolism , Arenavirus/genetics , Arenavirus/metabolism , Cell Line , Chlorocebus aethiops , Glycoproteins/genetics , HEK293 Cells , Humans , Membrane Fusion/genetics , Mutation/genetics , Pichinde virus/metabolism , Protein Sorting Signals/genetics , Vero Cells , Viral Envelope Proteins/metabolism , Virus Internalization , Virus Replication
10.
Nat Commun ; 10(1): 794, 2019 02 15.
Article in English | MEDLINE | ID: mdl-30770827

ABSTRACT

Prolonged exposure of CD8+ T cells to antigenic stimulation, as in chronic viral infections, leads to a state of diminished function termed exhaustion. We now demonstrate that even during exhaustion there is a subset of functional CD8+ T cells defined by surface expression of SIRPα, a protein not previously reported on lymphocytes. On SIRPα+ CD8+ T cells, expression of co-inhibitory receptors is counterbalanced by expression of co-stimulatory receptors and it is only SIRPα+ cells that actively proliferate, transcribe IFNγ and show cytolytic activity. Furthermore, target cells that express the ligand for SIRPα, CD47, are more susceptible to CD8+ T cell-killing in vivo. SIRPα+ CD8+ T cells are evident in mice infected with Friend retrovirus, LCMV Clone 13, and in patients with chronic HCV infections. Furthermore, therapeutic blockade of PD-L1 to reinvigorate CD8+ T cells during chronic infection expands the cytotoxic subset of SIRPα+ CD8+ T cells.


Subject(s)
Arenaviridae Infections/immunology , CD8-Positive T-Lymphocytes/immunology , Lymphocytic Choriomeningitis/immunology , Lymphocytic choriomeningitis virus/immunology , Receptors, Immunologic/immunology , Animals , Arenaviridae Infections/genetics , Arenaviridae Infections/virology , CD8-Positive T-Lymphocytes/metabolism , CD8-Positive T-Lymphocytes/virology , Female , Gene Expression/immunology , Gene Expression Profiling , Host-Pathogen Interactions/immunology , Humans , Lymphocyte Activation/genetics , Lymphocyte Activation/immunology , Lymphocytic Choriomeningitis/genetics , Lymphocytic Choriomeningitis/virology , Lymphocytic choriomeningitis virus/physiology , Mice, Inbred C57BL , Mice, Transgenic , Receptors, Immunologic/genetics , Receptors, Immunologic/metabolism , T-Lymphocytes, Cytotoxic/immunology , T-Lymphocytes, Cytotoxic/metabolism , T-Lymphocytes, Cytotoxic/virology
11.
J Virol ; 92(13)2018 07 01.
Article in English | MEDLINE | ID: mdl-29669840

ABSTRACT

RIG-I is a major cytoplasmic sensor of viral pathogen-associated molecular pattern (PAMP) RNA and induces type I interferon (IFN) production upon viral infection. A double-stranded RNA (dsRNA)-binding protein, PACT, plays an important role in potentiating RIG-I function. We have shown previously that arenaviral nucleoproteins (NPs) suppress type I IFN production via their RNase activity to degrade PAMP RNA. We report here that NPs of arenaviruses block the PACT-induced enhancement of RIG-I function to mediate type I IFN production and that this inhibition is dependent on the RNase function of NPs, which is different from that of a known mechanism of other viral proteins to abolish the interaction between PACT and RIG-I. To understand the biological roles of PACT and RIG-I in authentic arenavirus infection, we analyze growth kinetics of recombinant Pichinde virus (PICV), a prototypical arenavirus, in RIG-I knockout (KO) and PACT KO mouse embryonic fibroblast (MEF) cells. Wild-type (WT) PICV grew at higher titers in both KO MEF lines than in normal MEFs, suggesting the important roles of these cellular proteins in restricting virus replication. PICV carrying the NP RNase catalytically inactive mutation could not grow in normal MEFs but could replicate to some extent in both KO MEF lines. The level of virus growth was inversely correlated with the amount of type I IFNs produced. These results suggest that PACT plays an important role in potentiating RIG-I function to produce type I IFNs in order to restrict arenavirus replication and that viral NP RNase activity is essential for optimal viral replication by suppressing PACT-induced RIG-I activation.IMPORTANCE We report here a new role of the nucleoproteins of arenaviruses that can block type I IFN production via their specific inhibition of the cellular protein sensors of virus infection (RIG-I and PACT). Our results suggest that PACT plays an important role in potentiating RIG-I function to produce type I IFNs in order to restrict arenavirus replication. This new knowledge can be exploited for the development of novel antiviral treatments and/or vaccines against some arenaviruses that can cause severe and lethal hemorrhagic fever diseases in humans.


Subject(s)
Arenavirus/pathogenicity , Host-Pathogen Interactions , Interferon Type I/metabolism , Nucleoproteins/metabolism , RNA-Binding Proteins/metabolism , Receptors, Retinoic Acid/metabolism , Viral Proteins/metabolism , Arenaviridae Infections/genetics , Arenaviridae Infections/metabolism , Arenaviridae Infections/virology , HEK293 Cells , Humans , Nucleoproteins/genetics , Pichinde virus/physiology , RNA-Binding Proteins/genetics , Receptors, Retinoic Acid/genetics , Viral Proteins/genetics , Virus Replication
12.
Nat Immunol ; 18(9): 1046-1057, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28714979

ABSTRACT

Translation is a critical process in protein synthesis, but translational regulation in antigen-specific T cells in vivo has not been well defined. Here we have characterized the translatome of virus-specific CD8+ effector T cells (Teff cells) during acute infection of mice with lymphocytic choriomeningitis virus (LCMV). Antigen-specific T cells exerted dynamic translational control of gene expression that correlated with cell proliferation and stimulation via the T cell antigen receptor (TCR). The translation of mRNAs that encode translation machinery, including ribosomal proteins, was upregulated during the T cell clonal-expansion phase, followed by inhibition of the translation of those transcripts when the CD8+ Teff cells stopped dividing just before the contraction phase. That translational suppression was more pronounced in terminal effector cells than in memory precursor cells and was regulated by antigenic stimulation and signals from the kinase mTOR. Our studies show that translation of transcripts encoding ribosomal proteins is regulated during the differentiation of CD8+ Teff cells and might have a role in fate 'decisions' involved in the formation of memory cells.


Subject(s)
Arenaviridae Infections/immunology , CD8-Positive T-Lymphocytes/immunology , Cell Differentiation/immunology , Protein Biosynthesis/immunology , Animals , Arenaviridae Infections/genetics , Arenaviridae Infections/metabolism , CD8-Positive T-Lymphocytes/metabolism , Cell Differentiation/genetics , Flow Cytometry , Gene Expression Regulation , Immunologic Memory/immunology , Interferon-gamma/immunology , Lymphocytic choriomeningitis virus , Mice , Protein Biosynthesis/genetics , RNA, Messenger/metabolism , Receptors, Antigen, T-Cell/immunology , Reverse Transcriptase Polymerase Chain Reaction , Ribosomal Proteins/genetics , Ribosomal Proteins/metabolism , TOR Serine-Threonine Kinases/immunology
13.
Nat Immunol ; 18(7): 791-799, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28530712

ABSTRACT

During infection, antigen-specific T cells undergo tightly regulated developmental transitions controlled by transcriptional and post-transcriptional regulation of gene expression. We found that the microRNA miR-31 was strongly induced by activation of the T cell antigen receptor (TCR) in a pathway involving calcium and activation of the transcription factor NFAT. During chronic infection with lymphocytic choriomeningitis virus (LCMV) clone 13, miR-31-deficent mice recovered from clinical disease, while wild-type mice continued to show signs of disease. This disease phenotype was explained by the presence of larger numbers of cytokine-secreting LCMV-specific CD8+ T cells in miR-31-deficent mice than in wild-type mice. Mechanistically, miR-31 increased the sensitivity of T cells to type I interferons, which interfered with effector T cell function and increased the expression of several proteins related to T cell dysfunction during chronic infection. These studies identify miR-31 as an important regulator of T cell exhaustion in chronic infection.


Subject(s)
Arenaviridae Infections/immunology , CD8-Positive T-Lymphocytes/immunology , Cytokines/immunology , MicroRNAs/immunology , Receptors, Antigen, T-Cell/immunology , Animals , Antibodies, Viral/immunology , Arenaviridae Infections/genetics , CD8-Positive T-Lymphocytes/drug effects , Calcium/metabolism , Chromatin Immunoprecipitation , Dendritic Cells/immunology , Enzyme-Linked Immunosorbent Assay , Flow Cytometry , Gene Expression Profiling , Immunoblotting , Interferon Type I/pharmacology , Lymphocytic choriomeningitis virus/immunology , Mice , Mice, Knockout , MicroRNAs/genetics , NFATC Transcription Factors/metabolism , Real-Time Polymerase Chain Reaction
14.
Microb Pathog ; 104: 17-27, 2017 Mar.
Article in English | MEDLINE | ID: mdl-28062291

ABSTRACT

Boid inclusion body disease (BIBD) is a viral disease of boid snakes believed to be caused by reptarenavirus belonging to the family Arenaviridae. Unlike most mammalian arenaviruses, the reservoir host for reptarenavirus is still unknown. In this study, the pathological responses were evaluated in a mouse model for a period of 28 days. Blood and tissue samples (lung, liver, spleen, heart, kidney and brain) were collected for evaluation of hematology, biochemistry, histopathology and oxidative enzyme levels at six time points (1, 3, 7, 14, 21 and 28 days), after viral infection (2.0 × 106 pfu/mL) in the infected and normal saline in the control groups. An initial increase (p < 0.05) in white blood cell (WBC), neutrophil and lymphocyte counts were observed in the infected group at day 3 post infection, and a decline (p < 0.05) on day 7 and 4 post infection. Significant (p < 0.05) increases in alanine transaminase (ALT), aspartate transaminase (AST), creatinine, total protein and globulin levels were also observed in the infected group. An increased (p < 0.05) level of hydrogen peroxide, total antioxidant capacity (TAC), superoxide dismutase (SOD) activity and catalase activity (CAT) were frequently observed on different days in the infected group. The MDA activity was increased (p < 0.05) in the infected group on day 7 and 14. Histopathological changes observed in the liver, kidney, spleen, brain and lungs were mainly associated with degeneration, necrosis and infiltration of lymphocytes. Viral counts were low on days 7 and 14 but surged in both the liver and spleen on day 21 and 28. This study has shown that reptarenavirus replicates in mammalian host and induces oxidative stress. Furthermore, the resultant hematobiochemical and histopathological changes observed in infected mice were similar to what has been reported in mammarenavirus infections. This suggests that rodents may serve as potential reservoir hosts for reptarenavirus.


Subject(s)
Arenaviridae Infections/metabolism , Arenaviridae , Oxidative Stress , Alanine Transaminase , Animal Diseases/genetics , Animal Diseases/metabolism , Animal Diseases/pathology , Animal Diseases/virology , Animals , Antioxidants/metabolism , Arenaviridae Infections/genetics , Arenaviridae Infections/pathology , Arenaviridae Infections/virology , Biomarkers , Catalase , Disease Models, Animal , Gene Expression Regulation, Enzymologic , Hydrogen Peroxide/metabolism , Lipid Peroxidation , Liver/pathology , Liver/virology , Lung/pathology , Lung/virology , Male , Mice , Reactive Oxygen Species , Spleen/pathology , Spleen/virology , Superoxide Dismutase/metabolism , Vero Cells , Viral Load
15.
J Virol ; 87(24): 13930-5, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24109228

ABSTRACT

Ocozocoautla de Espinosa virus (OCEV) is a novel, uncultured arenavirus. We found that the OCEV glycoprotein mediates entry into grivet and bat cells through transferrin receptor 1 (TfR1) binding but that OCEV glycoprotein precursor (GPC)-pseudotyped retroviruses poorly entered 53 human cancer cell lines. Interestingly, OCEV and Tacaribe virus could use bat, but not human, TfR1. Replacing three human TfR1 amino acids with their bat ortholog counterparts transformed human TfR1 into an efficient OCEV and Tacaribe virus receptor.


Subject(s)
Arenaviridae Infections/metabolism , Arenaviridae Infections/veterinary , Arenaviruses, New World/physiology , Chiroptera/metabolism , Chlorocebus aethiops/metabolism , Receptors, Transferrin/metabolism , Receptors, Virus/metabolism , Virus Internalization , Amino Acid Sequence , Animals , Antigens, CD/genetics , Antigens, CD/metabolism , Arenaviridae Infections/genetics , Arenaviridae Infections/virology , Arenaviruses, New World/genetics , Cell Line , Chiroptera/genetics , Chiroptera/virology , Chlorocebus aethiops/genetics , Chlorocebus aethiops/virology , Humans , Molecular Sequence Data , Receptors, Transferrin/genetics , Receptors, Virus/genetics , Sequence Alignment , Viral Envelope Proteins/genetics , Viral Envelope Proteins/metabolism
16.
Blood ; 121(22): 4473-83, 2013 May 30.
Article in English | MEDLINE | ID: mdl-23596046

ABSTRACT

The precise microRNAs and their target cellular processes involved in generation of durable T-cell immunity remain undefined. Here we show a dynamic regulation of microRNAs as CD8 T cells differentiate from naïve to effector and memory states, with short-lived effectors transiently expressing higher levels of oncogenic miR-17-92 compared with the relatively less proliferating memory-fated effectors. Conditional CD8 T-cell-intrinsic gain or loss of expression of miR-17-92 in mature cells after activation resulted in striking reciprocal effects compared with wild-type counterparts in the same infection milieu-miR-17-92 deletion resulted in lesser proliferation of antigen-specific cells during primary expansion while favoring enhanced IL-7Rα and Bcl-2 expression and multicytokine polyfunctionality; in contrast, constitutive expression of miR-17-92 promoted terminal effector differentiation, with decreased formation of polyfunctional lymphoid memory cells. Increased proliferation upon miR-17-92 overexpression correlated with decreased expression of tumor suppressor PTEN and increased PI3K-AKT-mTOR signaling. Thus, these studies identify miR17-92 as a critical regulator of CD8 T-cell expansion and effector and memory lineages in the physiological context of acute infection, and present miR-17-92 as a potential target for modulating immunologic outcome after vaccination or immunotherapeutic treatments of cancer, chronic infections, or autoimmune disorders.


Subject(s)
Arenaviridae Infections/immunology , CD8-Positive T-Lymphocytes/immunology , Immunologic Memory/genetics , Lymphocytic Choriomeningitis/immunology , Lymphocytic choriomeningitis virus , MicroRNAs/immunology , Acute Disease , Animals , Arenaviridae Infections/genetics , CD8-Positive T-Lymphocytes/cytology , CD8-Positive T-Lymphocytes/virology , Cell Differentiation/immunology , Cell Lineage/immunology , Cell Proliferation , Female , Lymphocytic Choriomeningitis/genetics , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , MicroRNAs/genetics , Phosphatidylinositol 3-Kinases/metabolism , Proto-Oncogene Proteins c-akt/metabolism , Signal Transduction/immunology , T-Lymphocyte Subsets/cytology , T-Lymphocyte Subsets/immunology , T-Lymphocyte Subsets/virology , TOR Serine-Threonine Kinases/metabolism , Transcription, Genetic/immunology , Up-Regulation/immunology
17.
J Virol ; 87(11): 6406-14, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23536681

ABSTRACT

The arenaviruses are an important family of emerging viruses that includes several causative agents of severe hemorrhagic fevers in humans that represent serious public health problems. A crucial step of the arenavirus life cycle is maturation of the envelope glycoprotein precursor (GPC) by the cellular subtilisin kexin isozyme 1 (SKI-1)/site 1 protease (S1P). Comparison of the currently known sequences of arenavirus GPCs revealed the presence of a highly conserved aromatic residue at position P7 relative to the SKI-1/S1P cleavage side in Old World and clade C New World arenaviruses but not in New World viruses of clades A and B or cellular substrates of SKI-1/S1P. Using a combination of molecular modeling and structure-function analysis, we found that residue Y285 of SKI-1/S1P, distal from the catalytic triad, is implicated in the molecular recognition of the aromatic "signature residue" at P7 in the GPC of Old World Lassa virus. Using a quantitative biochemical approach, we show that Y285 of SKI-1/S1P is crucial for the efficient processing of peptides derived from Old World and clade C New World arenavirus GPCs but not of those from clade A and B New World arenavirus GPCs. The data suggest that during coevolution with their mammalian hosts, GPCs of Old World and clade C New World viruses expanded the molecular contacts with SKI-1/S1P beyond the classical four-amino-acid recognition sequences and currently occupy an extended binding pocket.


Subject(s)
Arenaviridae Infections/enzymology , Arenaviruses, New World/metabolism , Arenaviruses, Old World/metabolism , Proprotein Convertases/metabolism , Serine Endopeptidases/metabolism , Viral Envelope Proteins/metabolism , Amino Acid Motifs , Amino Acid Sequence , Animals , Arenaviridae Infections/genetics , Arenaviridae Infections/virology , Arenaviruses, New World/classification , Arenaviruses, New World/genetics , Arenaviruses, Old World/classification , Arenaviruses, Old World/genetics , CHO Cells , Cricetinae , Humans , Molecular Sequence Data , Proprotein Convertases/chemistry , Proprotein Convertases/genetics , Protein Processing, Post-Translational , Sequence Alignment , Serine Endopeptidases/chemistry , Serine Endopeptidases/genetics , Viral Envelope Proteins/chemistry , Viral Envelope Proteins/genetics
18.
J Immunol ; 190(7): 3390-8, 2013 Apr 01.
Article in English | MEDLINE | ID: mdl-23440411

ABSTRACT

IL-2 signals during the primary response to infection are essential in shaping CD8(+) T cell fate decisions. How CD8(+) T cells integrate IL-2 signals in the development of functional memory is not well understood. Because IL-2 induces potent activation of the STAT5 transcription factor, we tested the role of STAT5 in CD8(+) memory T cell differentiation and function using a model system in which STAT5 activity is inducibly abrogated upon CD8(+) T cell activation. We report that STAT5 activity is broadly important for the expansion and effector function of all effector CTL subsets. After pathogen clearance, STAT5 was required for the survival of effector phenotype memory CTLs during the contraction phase. However, despite its role in supporting full primary CD8(+) T cell expansion, and unlike IL-2, STAT5 activity is not required for the development of memory CD8(+) T cells capable of robust secondary expansion upon rechallenge. Our findings highlight differential requirements for survival signals between primary and secondary effector CTL, and demonstrate that IL-2-dependent programming of memory CD8(+) T cells capable of secondary expansion and secondary effector differentiation is largely STAT5 independent.


Subject(s)
Immunologic Memory , STAT5 Transcription Factor/metabolism , T-Lymphocytes, Cytotoxic/immunology , T-Lymphocytes, Cytotoxic/metabolism , Animals , Arenaviridae Infections/genetics , Arenaviridae Infections/immunology , Arenaviridae Infections/metabolism , CD8-Positive T-Lymphocytes/cytology , CD8-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/metabolism , Cell Differentiation/immunology , Gene Expression , Immunologic Memory/genetics , Interleukin-2/immunology , Interleukin-2/metabolism , Lymphocytic choriomeningitis virus/immunology , Mice , Mice, Knockout , STAT5 Transcription Factor/deficiency , STAT5 Transcription Factor/genetics , Signal Transduction , T-Lymphocytes, Cytotoxic/cytology
19.
Xi Bao Yu Fen Zi Mian Yi Xue Za Zhi ; 29(2): 113-7, 2013 Feb.
Article in Chinese | MEDLINE | ID: mdl-23388326

ABSTRACT

Objective To investigate the efficiencies of transfection and expression of human recombinant adenovirus Ad5F35-IL-12 in the different kinds of human mononuclear macrophages. Methods The human recombinant adenovirus Ad5F35-IL-12 was used to infect human peripheral blood monocytes, pleural fluid macrophages as well as THP-1, U937 monocyte cell lines and their phorbol myristate acetate (PMA)-induced macrophages. 48 h later, green fluorescence was observed under the fluorescence microscope to detect the transfection efficiency. The expressions of IL-12 double-subunits (p35, p40) mRNA were tested by RT-PCR and the level of IL-12p70 protein in the cell culture supernatant was detected with ELISA. Results The human recombinant adenovirus Ad5F35-IL-12 successfully infected the human peripheral blood monocytes, pleural fluid macrophages, THP-1 monocytes, U937 monocytes, and THP-1 and U937 macrophages induced with PMA. All above infected mononuclear macrophages effectively secreted IL-12p70 protein, and they were listed from high to low of IL-12p70 protein level as pleural fluid macrophages, U937 and THP-1 macrophages induced with PMA, U937 monocytes, human peripheral blood monocytes and THP-1 monocytes. Conclusion The human recombinant adenovirus Ad5F35-IL-12 could infect different kinds of mononuclear macrophages, and IL-12 p70 protein could be successfully expressed in cell supernatants.


Subject(s)
Adenoviridae/genetics , Arenaviridae Infections/genetics , Macrophages/virology , Enzyme-Linked Immunosorbent Assay , Humans , Interleukin-12/biosynthesis , Interleukin-12/immunology , Macrophages/immunology , Recombinant Proteins/genetics
20.
Cell Mol Life Sci ; 70(16): 2849-57, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23115008

ABSTRACT

Glycosylation of proteins is arguably the most prevalent co- and post-translational modification. It is responsible for increased heterogeneity and functional diversity of proteins. Here we discuss the importance of one type of glycosylation, specifically O-mannosylation and its relationship to a number of human diseases. The most widely studied O-mannose modified protein is alpha-dystroglycan (α-DG). Recent studies have focused intensely on α-DG due to the severity of diseases associated with its improper glycosylation. O-mannosylation of α-DG is involved in cancer metastasis, arenavirus entry, and multiple forms of congenital muscular dystrophy [1, 2]. In this review, we discuss the structural and functional characteristics of O-mannose-initiated glycan structures on α-DG, enzymes involved in the O-mannosylation pathway, and the diseases that are a direct result of disruptions within this pathway.


Subject(s)
Arenaviridae Infections/metabolism , Dystroglycans/metabolism , Mannose/metabolism , Muscular Dystrophies/metabolism , Neoplasms/metabolism , Animals , Arenaviridae Infections/genetics , Dystroglycans/chemistry , Dystroglycans/genetics , Glycosylation , Humans , Mannose/chemistry , Mannose/genetics , Muscular Dystrophies/genetics , Neoplasm Metastasis , Neoplasms/genetics , Neoplasms/pathology
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