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1.
Mol Microbiol ; 116(6): 1449-1463, 2021 12.
Article in English | MEDLINE | ID: mdl-34662460

ABSTRACT

Cyclic-di-GMP plays crucial role in the cell cycle regulation of the α-Proteobacterium Caulobacter crescentus. Here we investigated its role in the α-Proteobacterium Brucella abortus, a zoonotic intracellular pathogen. Surprisingly, deletion of all predicted cyclic-di-GMP synthesizing or degrading enzymes did not drastically impair the growth of B. abortus, nor its ability to grow inside cell lines. As other Rhizobiales, B. abortus displays unipolar growth from the new cell pole generated by cell division. We found that the phosphodiesterase PdeA, the ortholog of the essential polar growth factor RgsP of the Rhizobiale Sinorhizobium meliloti, is required for rod shape integrity but is not essential for B. abortus growth. Indeed, the radius of the pole is increased by 31 ± 1.7% in a ΔpdeA mutant, generating a coccoid morphology. A mutation in the cyclic-di-GMP phosphodiesterase catalytic site of PdeA does not generate the coccoid morphology and the ΔpdeA mutant kept the ability to recruit markers of new and old poles. However, the presence of PdeA is required in an intra-nasal mouse model of infection. In conclusion, we propose that PdeA contributes to bacterial morphology and virulence in B. abortus, but it is not crucial for polarity and asymmetric growth.


Subject(s)
Bacterial Proteins/metabolism , Brucella abortus/enzymology , Brucella abortus/growth & development , Brucellosis/microbiology , Phosphoric Diester Hydrolases/metabolism , Animals , Bacterial Proteins/genetics , Brucella abortus/genetics , Brucella abortus/metabolism , Cyclic GMP/analogs & derivatives , Cyclic GMP/metabolism , Female , Gene Expression Regulation, Bacterial , Humans , Mice , Mice, Inbred C57BL , Phosphoric Diester Hydrolases/genetics
2.
mBio ; 12(2)2021 04 20.
Article in English | MEDLINE | ID: mdl-33879593

ABSTRACT

The ability to sense and respond to environmental cues is essential for adaptation and survival in living organisms. In bacteria, this process is accomplished by multidomain sensor histidine kinases that undergo autophosphorylation in response to specific stimuli, thereby triggering downstream signaling cascades. However, the molecular mechanism of allosteric activation is not fully understood in these important sensor proteins. Here, we report the full-length crystal structure of a blue light photoreceptor LOV histidine kinase (LOV-HK) involved in light-dependent virulence modulation in the pathogenic bacterium Brucella abortus Joint analyses of dark and light structures determined in different signaling states have shown that LOV-HK transitions from a symmetric dark structure to a highly asymmetric light state. The initial local and subtle structural signal originated in the chromophore-binding LOV domain alters the dimer asymmetry via a coiled-coil rotary switch and helical bending in the helical spine. These amplified structural changes result in enhanced conformational flexibility and large-scale rearrangements that facilitate the phosphoryl transfer reaction in the HK domain.IMPORTANCE Bacteria employ two-component systems (TCSs) to sense and respond to changes in their surroundings. At the core of the TCS signaling pathway is the multidomain sensor histidine kinase, where the enzymatic activity of its output domain is allosterically controlled by the input signal perceived by the sensor domain. Here, we examine the structures and dynamics of a naturally occurring light-sensitive histidine kinase from the pathogen Brucella abortus in both its full-length and its truncated constructs. Direct comparisons between the structures captured in different signaling states have revealed concerted protein motions in an asymmetric dimer framework in response to light. Findings of this work provide mechanistic insights into modular sensory proteins that share a similar modular architecture.


Subject(s)
Bacterial Proteins/metabolism , Brucella abortus/enzymology , Brucella abortus/metabolism , Color , Histidine Kinase/chemistry , Histidine Kinase/metabolism , Light , Bacterial Proteins/genetics , Brucella abortus/genetics , Brucella abortus/pathogenicity , Histidine Kinase/genetics , Models, Molecular , Protein Domains , Signal Transduction
3.
J Bacteriol ; 202(20)2020 09 23.
Article in English | MEDLINE | ID: mdl-32747427

ABSTRACT

RNases are key regulatory components in prokaryotes, responsible for the degradation and maturation of specific RNA molecules at precise times. Specifically, RNases allow cells to cope with changes in their environment through rapid alteration of gene expression. To date, few RNases have been characterized in the mammalian pathogen Brucella abortus In the present work, we sought to investigate several RNases in B. abortus and determine what role, if any, they have in pathogenesis. Of the 4 RNases reported in this study, the highly conserved endoribonuclease, RNase E, was found to play an integral role in the virulence of B. abortus Although rne, which encodes RNase E, is essential in B. abortus, we were able to generate a strain encoding a defective version of RNase E lacking the C-terminal portion of the protein, and this strain (rne-tnc) was attenuated in a mouse model of Brucella infection. RNA-sequencing analysis revealed massive RNA dysregulation in B. abortusrne-tnc, with 122 upregulated and 161 downregulated transcripts compared to the parental strain. Interestingly, several mRNAs related to metal homeostasis were significantly decreased in the rne-tnc strain. We also identified a small regulatory RNA (sRNA), called Bsr4, that exhibited significantly elevated levels in rne-tnc, demonstrating an important role for RNase E in sRNA-mediated regulatory pathways in Brucella Overall, these data highlight the importance of RNase E in B. abortus, including the role of RNase E in properly controlling mRNA levels and contributing to virulence in an animal model of infection.IMPORTANCE Brucellosis is a debilitating disease of humans and animals globally, and there is currently no vaccine to combat human infection by Brucella spp. Moreover, effective antibiotic treatment in humans is extremely difficult and can lead to disease relapse. Therefore, it is imperative that systems and pathways be identified and characterized in the brucellae so new vaccines and therapies can be generated. In this study, we describe the impact of the endoribonuclease RNase E on the control of mRNA and small regulatory RNA (sRNA) levels in B. abortus, as well as the importance of RNase E for the full virulence of B. abortus This work greatly enhances our understanding of ribonucleases in the biology and pathogenesis of Brucella spp.


Subject(s)
Bacterial Proteins/metabolism , Brucella abortus/enzymology , Brucellosis/microbiology , Endoribonucleases/metabolism , RNA, Messenger/genetics , Animals , Bacterial Proteins/genetics , Brucella abortus/genetics , Endoribonucleases/genetics , Female , Gene Deletion , Gene Expression Regulation, Bacterial , Humans , Macrophages/microbiology , Mice , Mice, Inbred BALB C , RNA-Seq , Virulence
4.
J Bacteriol ; 201(22)2019 11 15.
Article in English | MEDLINE | ID: mdl-31481543

ABSTRACT

Brucella spp. are intracellular pathogens that cause a disease known as brucellosis. Though the genus is highly monomorphic at the genetic level, species have animal host preferences and some defining physiologic characteristics. Of note is the requirement for CO2 supplementation to cultivate particular species, which confounded early efforts to isolate B. abortus from diseased cattle. Differences in the capacity of Brucella species to assimilate CO2 are determined by mutations in the carbonic anhydrase gene, bcaA Ancestral single-nucleotide insertions in bcaA have resulted in frameshifted pseudogenes in B. abortus and B. ovis lineages, which underlie their inability to grow under the low CO2 tension of a standard atmosphere. Incubation of wild-type B. ovis in air selects for mutations that "rescue" a functional bcaA reading frame, which enables growth under low CO2 and enhances the growth rate under high CO2 Accordingly, we show that heterologous expression of functional Escherichia coli carbonic anhydrases enables B. ovis growth in air. Growth of B. ovis is acutely sensitive to a reduction in CO2 tension, while frame-rescued B. ovis mutants are insensitive to CO2 shifts. B. ovis initiates a gene expression program upon CO2 downshift that resembles the stringent response and results in transcriptional activation of its type IV secretion system. Our study provides evidence that loss-of-function insertion mutations in bcaA sensitize the response of B. ovis and B. abortus to reduced CO2 tension relative to that of other Brucella lineages. CO2-dependent starvation and virulence gene expression programs in these species may influence persistence or transmission in natural hosts.IMPORTANCEBrucella spp. are highly related, but they exhibit differences in animal host preference that must be determined by genome sequence differences. B. ovis and the majority of B. abortus strains require high CO2 tension to be cultivated in vitro and harbor conserved insertional mutations in the carbonic anhydrase gene, bcaA, which underlie this trait. Mutants that grow in a standard atmosphere, first reported nearly a century ago, are easily selected in the laboratory. These mutants harbor varied indel polymorphisms in bcaA that restore its consensus reading frame and rescue its function. Loss of bcaA function has evolved independently in the B. ovis and B. abortus lineages and results in a dramatically increased sensitivity to CO2 limitation.


Subject(s)
Brucella/genetics , Carbon Dioxide/metabolism , Carbonic Anhydrases/genetics , Pseudogenes/genetics , Alleles , Brucella/enzymology , Brucella/metabolism , Brucella abortus/enzymology , Brucella abortus/genetics , Brucella abortus/metabolism , Brucella ovis/enzymology , Brucella ovis/genetics , Brucella ovis/metabolism , Carbonic Anhydrases/metabolism , DNA, Bacterial/genetics , Frameshift Mutation/genetics , Loss of Function Mutation/genetics , Pseudogenes/physiology
5.
FEBS J ; 286(13): 2522-2535, 2019 07.
Article in English | MEDLINE | ID: mdl-30927485

ABSTRACT

Brucella spp. are pathogenic intracellular Gram-negative bacteria adapted to life within cells of several mammals, including humans. These bacteria are the causative agent of brucellosis, one of the zoonotic infections with the highest incidence in the world and for which a human vaccine is still unavailable. Current therapeutic treatments against brucellosis are based on the combination of two or more antibiotics for prolonged periods, which may lead to antibiotic resistance in the population. Riboflavin (vitamin B2) is biosynthesized by microorganisms and plants but mammals, including humans, must obtain it from dietary sources. Owing to the absence of the riboflavin biosynthetic enzymes in animals, this pathway is nowadays regarded as a rich resource of targets for the development of new antimicrobial agents. In this work, we describe a high-throughput screening approach to identify inhibitors of the enzymatic activity of riboflavin synthase, the last enzyme in this pathway. We also provide evidence for their subsequent validation as potential drug candidates in an in vitro brucellosis infection model. From an initial set of 44 000 highly diverse low molecular weight compounds with drug-like properties, we were able to identify ten molecules with 50% inhibitory concentrations in the low micromolar range. Further Brucella culture and intramacrophagic replication experiments showed that the most effective bactericidal compounds share a 2-Phenylamidazo[2,1-b][1,3]benzothiazole chemical scaffold. Altogether, these findings set up the basis for the subsequent lead optimization process and represent a promising advancement in the pursuit of novel and effective antimicrobial compounds against brucellosis.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacterial Proteins/antagonists & inhibitors , Brucella abortus/drug effects , Enzyme Inhibitors/pharmacology , Riboflavin Synthase/antagonists & inhibitors , Small Molecule Libraries/pharmacology , Animals , Anti-Bacterial Agents/chemistry , Bacterial Proteins/metabolism , Brucella abortus/enzymology , Cell Line , Enzyme Inhibitors/chemistry , High-Throughput Screening Assays/methods , Mice , Protein Binding , Riboflavin Synthase/metabolism , Small Molecule Libraries/chemistry
6.
Vaccine ; 37(12): 1554-1564, 2019 03 14.
Article in English | MEDLINE | ID: mdl-30792035

ABSTRACT

The aim of this study was to investigate the induction of mucosal immune responses by an important Brucella abortus antigen, malate dehydrogenase (Mdh), loaded in mucoadhesive chitosan nanoparticles (CNs) and immunized intranasally in a BALB/c mouse model. The production of cytokines was investigated in human leukemic monocyte cells (THP-1 cells) after stimulation with the nanoparticles. Mdh-loaded CNs (CNs-Mdh) induced higher interleukin (IL)-6 production than unloaded antigens and TF loaded CNs (CNs-TF). Using ELISpot to quantify cytokines and antibody-secreting cells in the intranasally immunized mice, IL-4 and IgG-secreting cells were found to be significantly increased at 4 weeks and 6 weeks post-immunization in the CNs-Mdh immunized group, respectively. Increases in Mdh-specific IgG, IgG1, and IgG2a antibodies were confirmed at 6 weeks after immunization, indicating a predominant IgG1 response. Analysis of the mucosal immune response in the intranasally immunized mice revealed, Mdh-specific IgA and total IgA in the nasal washes, genital secretions, fecal extracts and sera that were remarkably increased in the CNs-Mdh-immunized group compared to the CNs-TF-immunized group except total IgA of nasal wash. Therefore, the results indicated that the intranasal immunization of CNs-loaded B. abortus Mdh antigen effectively induced antigen-specific mucosal immune responses through the elicitation of Th2-related immune responses.


Subject(s)
Brucella abortus/immunology , Brucellosis/prevention & control , Chitosan , Immunoglobulin A/immunology , Malate Dehydrogenase/immunology , Nanoparticles , Th2 Cells/immunology , Administration, Intranasal , Animals , Brucella Vaccine/administration & dosage , Brucella Vaccine/immunology , Brucella abortus/enzymology , Cell Line , Chitosan/chemistry , Cytokines/biosynthesis , Enzyme-Linked Immunospot Assay , Humans , Immunity, Mucosal , Immunization , Immunoglobulin G/blood , Immunoglobulin G/immunology , Malate Dehydrogenase/administration & dosage , Malate Dehydrogenase/chemistry , Mice , Nanoparticles/chemistry , Recombinant Proteins , Th2 Cells/metabolism
7.
Mol Microbiol ; 111(3): 637-661, 2019 03.
Article in English | MEDLINE | ID: mdl-30536925

ABSTRACT

Molecular components of the Brucella abortus cell envelope play a major role in its ability to infect, colonize and survive inside mammalian host cells. In this study, we have defined a role for a conserved gene of unknown function in B. abortus envelope stress resistance and infection. Expression of this gene, which we name eipA, is directly activated by the essential cell cycle regulator, CtrA. eipA encodes a soluble periplasmic protein that adopts an unusual eight-stranded ß-barrel fold. Deletion of eipA attenuates replication and survival in macrophage and mouse infection models, and results in sensitivity to treatments that compromise the cell envelope integrity. Transposon disruption of genes required for LPS O-polysaccharide biosynthesis is synthetically lethal with eipA deletion. This genetic connection between O-polysaccharide and eipA is corroborated by our discovery that eipA is essential in Brucella ovis, a naturally rough species that harbors mutations in several genes required for O-polysaccharide production. Conditional depletion of eipA expression in B. ovis results in a cell chaining phenotype, providing evidence that eipA directly or indirectly influences cell division in Brucella. We conclude that EipA is a molecular determinant of Brucella virulence that functions to maintain cell envelope integrity and influences cell division.


Subject(s)
Brucella abortus/growth & development , Brucella abortus/pathogenicity , Cell Cycle , Cell Wall/metabolism , O Antigens/metabolism , Periplasmic Proteins/metabolism , Virulence Factors/metabolism , Animals , Brucella abortus/enzymology , Brucella abortus/genetics , Brucella ovis/genetics , Brucella ovis/growth & development , Brucellosis/microbiology , Brucellosis/pathology , Disease Models, Animal , Gene Deletion , Gene Knockdown Techniques , Genes, Bacterial , Genes, Essential , Histocytochemistry , Macrophages/microbiology , Mice, Inbred BALB C , Microbial Viability , Periplasmic Proteins/chemistry , Periplasmic Proteins/genetics , Protein Conformation , Protein Folding , Spleen/pathology , Virulence Factors/chemistry , Virulence Factors/genetics
8.
J Biol Chem ; 293(49): 19038-19046, 2018 12 07.
Article in English | MEDLINE | ID: mdl-30323065

ABSTRACT

Two DNA methyltransferases, Dam and ß-class cell cycle-regulated DNA methyltransferase (CcrM), are key mediators of bacterial epigenetics. CcrM from the bacterium Caulobacter crescentus (CcrM C. crescentus, methylates adenine at 5'-GANTC-3') displays 105-107-fold sequence discrimination against noncognate sequences. However, the underlying recognition mechanism is unclear. Here, CcrM C. crescentus activity was either improved or mildly attenuated with substrates having one to three mismatched bp within or adjacent to the recognition site, but only if the strand undergoing methylation is left unchanged. By comparison, single-mismatched substrates resulted in up to 106-fold losses of activity with α (Dam) and γ-class (M.HhaI) DNA methyltransferases. We found that CcrM C. crescentus has a greatly expanded DNA-interaction surface, covering six nucleotides on the 5' side and eight nucleotides on the 3' side of its recognition site. Such a large interface may contribute to the enzyme's high sequence fidelity. CcrM C. crescentus displayed the same sequence discrimination with single-stranded substrates, and a surprisingly large (>107-fold) discrimination against ssRNA was largely due to the presence of two or more riboses within the cognate (DNA) site but not outside the site. Results from C-terminal truncations and point mutants supported our hypothesis that the recently identified C-terminal, 80-residue segment is essential for dsDNA recognition but is not required for single-stranded substrates. CcrM orthologs from Agrobacterium tumefaciens and Brucella abortus share some of these newly discovered features of the C. crescentus enzyme, suggesting that the recognition mechanism is conserved. In summary, CcrM C. crescentus uses a previously unknown DNA recognition mechanism.


Subject(s)
Bacterial Proteins/metabolism , Caulobacter crescentus/enzymology , DNA, Bacterial/metabolism , Site-Specific DNA-Methyltransferase (Adenine-Specific)/metabolism , Agrobacterium tumefaciens/enzymology , Amino Acid Sequence , Bacterial Proteins/chemistry , Base Pair Mismatch , Brucella abortus/enzymology , Catalytic Domain , DNA Methylation , DNA, Bacterial/genetics , Protein Domains , Site-Specific DNA-Methyltransferase (Adenine-Specific)/chemistry
9.
J Bacteriol ; 200(12)2018 06 15.
Article in English | MEDLINE | ID: mdl-29632093

ABSTRACT

The YbeY endoribonuclease is one of the best-conserved proteins across the kingdoms of life. In the present study, we demonstrated that YbeY in Brucella abortus is linked to a variety of important activities, including proper cellular morphology, mRNA transcript levels, and virulence. Deletion of ybeY in B. abortus led to a small-colony phenotype when the bacteria were grown on agar medium, as well as to significant aberrations in the morphology of the bacterial cell as evidenced by electron microscopy. Additionally, compared to the parental strain, the ΔybeY strain was significantly attenuated in both macrophage and mouse models of infection. The ΔybeY strain also showed increased sensitivities to several in vitro-applied stressors, including bile acid, hydrogen peroxide, SDS, and paraquat. Transcriptomic analysis revealed that a multitude of mRNA transcripts are dysregulated in the ΔybeY strain, and many of the identified mRNAs encode proteins involved in metabolism, nutrient transport, transcriptional regulation, and flagellum synthesis. We subsequently constructed gene deletion strains of the most highly dysregulated systems, and several of the YbeY-linked gene deletion strains exhibited defects in the ability of the bacteria to survive and replicate in primary murine macrophages. Taken together, these data establish a clear role for YbeY in the biology and virulence of Brucella; moreover, this work further illuminates the highly varied roles of this widely conserved endoribonuclease in bacteria.IMPORTANCEBrucella spp. are highly efficient bacterial pathogens of animals and humans, causing significant morbidity and economic loss worldwide, and relapse of disease often occurs following antibiotic treatment of human brucellosis. As such, novel therapeutic strategies to combat Brucella infections are needed. Ribonucleases in the brucellae are understudied, and these enzymes represent elements that may be potential targets for future treatment approaches. The present work demonstrates the importance of the YbeY endoribonuclease for cellular morphology, efficient control of mRNA levels, and virulence in B. abortus Overall, the results of this study advance our understanding of the critical roles of YbeY in the pathogenesis of the intracellular brucellae and expand our understanding of this highly conserved RNase.


Subject(s)
Bacterial Proteins/metabolism , Brucella abortus/enzymology , Brucella abortus/pathogenicity , Brucellosis/microbiology , Endoribonucleases/metabolism , Animals , Bacterial Proteins/genetics , Brucella abortus/genetics , Brucella abortus/growth & development , Endoribonucleases/genetics , Female , Gene Expression Regulation, Bacterial , Humans , Macrophages/microbiology , Male , Mice , Mice, Inbred BALB C , Virulence
10.
World J Microbiol Biotechnol ; 34(2): 22, 2018 Jan 04.
Article in English | MEDLINE | ID: mdl-29302824

ABSTRACT

Brucellae are intracellular bacterial pathogens that cause Brucellosis, bringing great economic burdens to developing countries. The pathogenic mechanisms of Brucella are still poorly understood. Earlier immune response plays an important role in the Brucella infection. Phosphoglyceromutase (PGM) and dihydrodipicolinate reductase (DapB) were cloned, expressed, purified, and their immunocompetence was analyzed. Cytokines were detected by murine macrophages (RAW 264.7) and splenocytes that stimulated with the two recombinant proteins. The immune responses were analyzed by ELISA from mice with the two recombinant proteins immunized. TNF-α, IL-6 and IL-8 were produced in stimulated RAW 264.7 cells and splenocytes. Th1-type cytokines, IFN-γ and IL-2, induced in RAW 264.7 cells and splenocytes were higher then Th2-type cytokines, IL-4 and IL-5. Th2-related immune response was induced in splenocytes obtained 35 days after mice immunized with the two proteins. The production of IgG1 was higher than IgG2a in immunized mice. Taken together, our results demonstrated that the two proteins could induce Th1 and Th2-type immune responses in vivo and in vitro.


Subject(s)
Brucella abortus/enzymology , Brucella abortus/immunology , Brucellosis/immunology , Dihydrodipicolinate Reductase/pharmacology , Phosphoglycerate Mutase/pharmacology , Th1 Cells/drug effects , Th2 Cells/drug effects , Animals , Brucella abortus/genetics , Brucellosis/microbiology , China , Cloning, Molecular , Cytokines/immunology , Cytokines/metabolism , Dihydrodipicolinate Reductase/genetics , Female , Gene Expression Regulation, Bacterial , Genes, Bacterial , Immunization , Immunoglobulin G , Interferon-gamma/metabolism , Interleukin-2/metabolism , Interleukin-4/metabolism , Interleukin-5/metabolism , Interleukin-6/metabolism , Interleukin-8/metabolism , Macrophages/drug effects , Macrophages/immunology , Mice , Mice, Inbred BALB C , Phosphoglycerate Mutase/genetics , RAW 264.7 Cells/drug effects , Recombinant Proteins/immunology , Th1 Cells/immunology , Th2 Cells/immunology , Tumor Necrosis Factor-alpha/immunology , Tumor Necrosis Factor-alpha/metabolism
11.
Microbiology (Reading) ; 163(7): 970-979, 2017 07.
Article in English | MEDLINE | ID: mdl-28691659

ABSTRACT

Proline utilization (Put) systems have been described in a number of bacteria; however, the importance and functionality of the Put system in the intracellular pathogen Brucellaabortus has not been explored. Generally, bacterial Put systems are composed of the bifunctional enzyme proline dehydrogenase PutA and its transcriptional activator PutR. Here, we demonstrate that the genes putA (bab2_0518) and putR (bab2_0517) are critical for the chronic infection of mice by B. abortus, but putA and putR are not required for the survival and replication of the bacteria in naive macrophages. Additionally, in vitro experiments revealed that putR is necessary for the ability of the bacteria to withstand oxidative stress, as a ΔputR deletion strain is hypersensitive to hydrogen peroxide exposure. Quantitative reverse transcription-PCR and putA-lacZ transcriptional reporter studies revealed that PutR acts as a transcriptional activator of putA in Brucella, and electrophoretic mobility shift assays confirmed that PutR binds directly to the putA promoter region. Biochemical analyses demonstrated that a purified recombinant B. abortus PutA protein possesses quintessential proline dehydrogenase activity, as PutA is capable of catalysing the conversion of proline to glutamate. Altogether, these data are the first to reveal that the Put system plays a significant role in the ability of B. abortus to replicate and survive within its host, as well as to describe the genetic regulation and biochemical activity of the Put system in Brucella.


Subject(s)
Bacterial Proteins/metabolism , Brucella abortus/metabolism , Brucella abortus/pathogenicity , Brucellosis/microbiology , Proline Oxidase/metabolism , Proline/metabolism , Trans-Activators/metabolism , Animals , Bacterial Proteins/genetics , Brucella abortus/enzymology , Brucella abortus/genetics , Gene Expression Regulation, Bacterial , Glutamic Acid/metabolism , Humans , Mice , Mice, Inbred BALB C , Proline Oxidase/genetics , Trans-Activators/genetics , Virulence
12.
Biochem J ; 474(7): 1221-1239, 2017 03 23.
Article in English | MEDLINE | ID: mdl-28126739

ABSTRACT

Cysteine biosynthesis takes place via a two-step pathway in bacteria, fungi, plants and protozoan parasites, but not in humans, and hence, the machinery of cysteine biosynthesis is an opportune target for therapeutics. The decameric cysteine synthase complex (CSC) is formed when the C-terminal tail of serine acetyltransferase (SAT) binds in the active site of O-acetylserine sulfydrylase (OASS), playing a role in the regulation of this pathway. Here, we show that OASS from Brucella abortus (BaOASS) does not interact with its cognate SAT C-terminal tail. Crystal structures of native BaOASS showed that residues Gln96 and Tyr125 occupy the active-site pocket and interfere with the entry of the SAT C-terminal tail. The BaOASS (Q96A-Y125A) mutant showed relatively strong binding (Kd = 32.4 µM) to BaSAT C-terminal peptides in comparison with native BaOASS. The mutant structure looks similar except that the active-site pocket has enough space to bind the SAT C-terminal end. Surface plasmon resonance results showed a relatively strong (7.3 µM Kd) interaction between BaSAT and the BaOASS (Q96A-Y125A), but no interaction with native BaOASS. Taken together, our observations suggest that the CSC does not form in B. abortus.


Subject(s)
Bacterial Proteins/chemistry , Brucella abortus/chemistry , Cysteine Synthase/chemistry , Cysteine/biosynthesis , Serine O-Acetyltransferase/chemistry , Amino Acid Sequence , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Brucella abortus/enzymology , Catalytic Domain , Cloning, Molecular , Crystallography, X-Ray , Cysteine Synthase/genetics , Cysteine Synthase/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Kinetics , Models, Molecular , Mutation , Protein Binding , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Interaction Domains and Motifs , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Serine O-Acetyltransferase/genetics , Serine O-Acetyltransferase/metabolism , Structure-Activity Relationship , Substrate Specificity
13.
Int J Mol Sci ; 17(7)2016 Jul 19.
Article in English | MEDLINE | ID: mdl-27447614

ABSTRACT

Targeting threonyl-tRNA synthetase (ThrRS) of Brucella abortus is a promising approach to developing small-molecule drugs against bovine brucellosis. Using the BLASTp algorithm, we identified ThrRS from Escherichia coli (EThrRS, PDB ID 1QF6), which is 51% identical to ThrRS from Brucella abortus (BaThrRS) at the amino acid sequence level. EThrRS was used as the template to construct a BaThrRS homology model which was optimized using molecular dynamics simulations. To determine the residues important for substrate ATP binding, we identified the ATP-binding regions of BaThrRS, docked ATP to the protein, and identified the residues whose side chains surrounded bound ATP. We then used the binding site of ATP to virtually screen for BaThrRS inhibitors and got seven leads. We further characterized the BaThrRS-binding site of the compound with the highest predicted inhibitory activity. Our results should facilitate future experimental effects to find novel drugs for use against bovine brucellosis.


Subject(s)
Adenosine Triphosphate/metabolism , Anti-Bacterial Agents/metabolism , Brucella abortus/enzymology , Enzyme Inhibitors/metabolism , Threonine-tRNA Ligase/antagonists & inhibitors , Threonine-tRNA Ligase/metabolism , Amino Acid Sequence , Animals , Binding Sites , Brucellosis, Bovine/drug therapy , Brucellosis, Bovine/microbiology , Cattle , Models, Molecular , Molecular Dynamics Simulation , Sequence Homology, Amino Acid
14.
J Vet Sci ; 17(1): 119-22, 2016 Mar.
Article in English | MEDLINE | ID: mdl-27051349

ABSTRACT

The Brucella mdh gene was successfully cloned and expressed in E. coli. The purified recombinant malate dehydrogenase protein (rMDH) was reactive to Brucella-positive bovine serum in the early stage, but not reactive in the middle or late stage, and was reactive to Brucella-positive mouse serum in the late stage, but not in the early or middle stage of infection. In addition, rMDH did not react with Brucella-negative bovine or mouse sera. These results suggest that rMDH has the potential for use as a specific antigen in serological diagnosis for early detection of bovine brucellosis.


Subject(s)
Antigens, Bacterial/immunology , Brucella abortus/enzymology , Brucellosis/veterinary , Cattle Diseases/diagnosis , Malate Dehydrogenase/genetics , Malate Dehydrogenase/immunology , Recombinant Proteins/immunology , Animals , Brucella abortus/immunology , Brucellosis/diagnosis , Cattle , Cloning, Molecular , Enzyme-Linked Immunosorbent Assay , Escherichia coli/genetics , Malate Dehydrogenase/isolation & purification , Mice , Recombinant Proteins/genetics
15.
Article in English | WPRIM (Western Pacific) | ID: wpr-56503

ABSTRACT

The Brucella mdh gene was successfully cloned and expressed in E. coli. The purified recombinant malate dehydrogenase protein (rMDH) was reactive to Brucella-positive bovine serum in the early stage, but not reactive in the middle or late stage, and was reactive to Brucella-positive mouse serum in the late stage, but not in the early or middle stage of infection. In addition, rMDH did not react with Brucella-negative bovine or mouse sera. These results suggest that rMDH has the potential for use as a specific antigen in serological diagnosis for early detection of bovine brucellosis.


Subject(s)
Animals , Cattle , Mice , Antigens, Bacterial/immunology , Brucella abortus/enzymology , Brucellosis/diagnosis , Cattle Diseases/diagnosis , Cloning, Molecular , Enzyme-Linked Immunosorbent Assay , Escherichia coli/genetics , Malate Dehydrogenase/genetics , Recombinant Proteins/genetics
16.
Acta Crystallogr D Biol Crystallogr ; 71(Pt 7): 1433-43, 2015 Jul.
Article in English | MEDLINE | ID: mdl-26143915

ABSTRACT

The histidine kinase (HK) domain belonging to the light-oxygen-voltage histidine kinase (LOV-HK) from Brucella abortus is a member of the HWE family, for which no structural information is available, and has low sequence identity (20%) to the closest HK present in the PDB. The `off-edge' S-SAD method in macromolecular X-ray crystallography was used to solve the structure of the HK domain from LOV-HK at low resolution from crystals in a low-symmetry space group (P21) and with four copies in the asymmetric unit (∼108 kDa). Data were collected both from multiple crystals (diffraction limit varying from 2.90 to 3.25 Å) and from multiple orientations of the same crystal, using the κ-geometry goniostat on SOLEIL beamline PROXIMA 1, to obtain `true redundancy'. Data from three different crystals were combined for structure determination. An optimized HK construct bearing a shorter cloning artifact yielded crystals that diffracted X-rays to 2.51 Šresolution and that were used for final refinement of the model. Moreover, a thorough a posteriori analysis using several different combinations of data sets allowed us to investigate the impact of the data-collection strategy on the success of the structure determination.


Subject(s)
Brucella abortus/enzymology , Protein Kinases/chemistry , Brucella abortus/chemistry , Crystallization , Crystallography, X-Ray/methods , Histidine Kinase , Models, Molecular , Protein Conformation , Protein Structure, Tertiary
17.
J Mol Biol ; 427(20): 3258-3272, 2015 Oct 09.
Article in English | MEDLINE | ID: mdl-26113057

ABSTRACT

Brucella abortus is an important pathogenic bacterium that has to overcome oxygen deficiency in order to achieve a successful infection. Previously, we proved that a two-component system formed by the histidine kinase NtrY and the response regulator NtrX is essential to achieve an adaptive response to low oxygen tension conditions. Even though the relevance of this signaling pathway has already been demonstrated in other microorganisms, its molecular activation mechanism has not yet been described in detail. In this article, we report the first crystal structures from different conformations of the NtrX receiver domain from B. abortus, and we propose a sequence of events to explain the structural rearrangements along the activation process. The analysis of the structures obtained in the presence of the phosphoryl group analog beryllofluoride led us to postulate that changes in the interface formed by the α4 helix and the ß5 strand are important for the activation, producing a reorientation of the α5 helix. Also, a biochemical characterization of the NtrX receiver domain enzymatic activities was performed, describing its autophosphorylation and autodephosphorylation kinetics. Finally, the role of H85, an important residue, was addressed by site-directed mutagenesis. Overall, these results provide significant structural basis for understanding the response regulator activation in this bacterial two-component system.


Subject(s)
Bacterial Proteins/ultrastructure , Brucella abortus/enzymology , Protein Kinases/ultrastructure , Brucella abortus/metabolism , Cell Hypoxia/physiology , Crystallography, X-Ray , Histidine Kinase , Oxygen/metabolism , Protein Structure, Tertiary , Signal Transduction
18.
PLoS One ; 10(5): e0124058, 2015.
Article in English | MEDLINE | ID: mdl-25993430

ABSTRACT

Brucella is the causative agent of the zoonotic disease brucellosis, and its success as an intracellular pathogen relies on its ability to adapt to the harsh environmental conditions that it encounters inside the host. The Brucella genome encodes a sensor histidine kinase containing a LOV domain upstream from the kinase, LOVHK, which plays an important role in light-regulated Brucella virulence. In this report we study the intracellular signaling pathway initiated by the light sensor LOVHK using an integrated biochemical and genetic approach. From results of bacterial two-hybrid assays and phosphotransfer experiments we demonstrate that LOVHK functionally interacts with two response regulators: PhyR and LovR, constituting a functional two-component signal-transduction system. LOVHK contributes to the activation of the General Stress Response (GSR) system in Brucella via PhyR, while LovR is proposed to be a phosphate-sink for LOVHK, decreasing its phosphorylation state. We also show that in the absence of LOVHK the expression of the virB operon is down-regulated. In conclusion, our results suggest that LOVHK positively regulates the GSR system in vivo, and has an effect on the expression of the virB operon. The proposed regulatory network suggests a similar role for LOVHK in other microorganisms.


Subject(s)
Brucella abortus/genetics , Genes, Bacterial , Operon , Protein Kinases/metabolism , Stress, Physiological , Brucella abortus/enzymology , Histidine Kinase , RNA, Bacterial/isolation & purification , Two-Hybrid System Techniques
19.
APMIS ; 123(8): 667-75, 2015 Aug.
Article in English | MEDLINE | ID: mdl-25939375

ABSTRACT

Brucellosis is a world prevalent endemic illness that is transmitted from domestic animals to humans. Brucella spp. exploits urease for survival in the harsh conditions of stomach during the gastrointestinal infection. In this study, we examined the immune response and the protection elicited by using recombinant Brucella urease (rUrease) vaccination in BALB/c mice. The urease gene was cloned in pET28a and the resulting recombinant protein was employed as subunit vaccine. Recombinant protein was administered subcutaneously and intraperitoneally. Dosage reduction was observed with subcutaneous (SC) vaccination when compared with intraperitoneal (IP) vaccination. rUrease induced mixed Th1-Th2 immune responses with high titers of specific IgG1 and IgG2a. In lymphocyte proliferation assay, splenocytes from IP and SC-vaccinated mice displayed a strong recall proliferative response with high amounts of IL-4, IL-12 and IFN-γ production. Vaccinated mice were challenged with virulent Brucella melitensis, B. abortus and B. suis. The SC vaccination route exhibited a higher degree of protection than IP vaccination (p value ≤ 0.05). Altogether, our results indicated that rUrease could be a useful antigen candidate for the development of subunit vaccines against brucellosis.


Subject(s)
Bacterial Vaccines/immunology , Brucella abortus/immunology , Brucella melitensis/immunology , Brucellosis/prevention & control , Animals , Antibody Formation/immunology , Brucella abortus/enzymology , Brucella melitensis/enzymology , Brucellosis/immunology , Cell Proliferation , Cloning, Molecular , Female , Immunization , Immunoglobulin G/blood , Injections, Subcutaneous , Interferon-gamma/blood , Interleukin-12/blood , Interleukin-4/blood , Mice , Mice, Inbred BALB C , Molecular Sequence Data , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Urease
20.
Mol Microbiol ; 94(4): 913-25, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25257300

ABSTRACT

In the intracellular pathogen Brucella abortus, the general stress response (GSR) signalling system determines survival under acute stress conditions in vitro, and is required for long-term residence in a mammalian host. To date, the identity of the Brucella sensor kinase(s) that function to perceive stress and directly activate GSR signalling have remained undefined. We demonstrate that the flavin-binding sensor histidine kinase, LovhK (bab2_0652), functions as a primary B. abortus GSR sensor. LovhK rapidly and specifically phosphorylates the central GSR regulator, PhyR, and activates transcription of a set of genes that closely overlaps the known B. abortus GSR regulon. Deletion of lovhK severely compromises cell survival under defined oxidative and acid stress conditions. We further show that lovhK is required for cell survival during the early phase of mammalian cell infection and for establishment of long-term residence in a mouse infection model. Finally, we present evidence that particular regions of primary structure within the two N-terminal PAS domains of LovhK have distinct sensory roles under specific environmental conditions. This study elucidates new molecular components of a conserved signalling pathway that regulates B. abortus stress physiology and infection biology.


Subject(s)
Brucella abortus/physiology , Gene Expression Regulation, Bacterial , Protein Kinases/metabolism , Signal Transduction , Stress, Physiological , Virulence Factors/metabolism , Acids/toxicity , Animals , Brucella abortus/enzymology , Brucella abortus/genetics , Brucella abortus/metabolism , Brucellosis/microbiology , Cell Line , Disease Models, Animal , Gene Deletion , Histidine Kinase , Humans , Mice , Microbial Viability , Monocytes/microbiology , Oxidants/toxicity , Phosphorylation , Protein Kinases/genetics , Protein Processing, Post-Translational , Transcription, Genetic
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