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1.
J Bone Miner Res ; 39(4): 498-512, 2024 May 02.
Article in English | MEDLINE | ID: mdl-38477756

ABSTRACT

Mutations in the Chromodomain helicase DNA-binding protein 7 - coding gene (CHD7) cause CHARGE syndrome (CS). Although craniofacial and skeletal abnormalities are major features of CS patients, the role of CHD7 in bone and cartilage development remain largely unexplored. Here, using a zebrafish (Danio rerio) CS model, we show that chd7-/- larvae display abnormal craniofacial cartilage development and spinal deformities. The craniofacial and spine defects are accompanied by a marked reduction of bone mineralization. At the molecular level, we show that these phenotypes are associated with significant reduction in the expression levels of osteoblast differentiation markers. Additionally, we detected a marked depletion of collagen 2α1 in the cartilage of craniofacial regions and vertebrae, along with significantly reduced number of chondrocytes. Chondrogenesis defects are at least in part due to downregulation of htr2b, which we found to be also dysregulated in human cells derived from an individual with CHD7 mutation-positive CS. Overall, this study thus unveils an essential role for CHD7 in cartilage and bone development, with potential clinical relevance for the craniofacial defects associated with CS.


Patients with CHARGE syndrome exhibit skeletal defects. CHARGE syndrome is primarily caused by mutations in the chromatin remodeler-coding gene CHD7. To investigate the poorly characterized role of CHD7 in cartilage and bone development, here, we examine the craniofacial and bone anomalies in a zebrafish chd7-/- mutant model. We find that zebrafish mutant larvae exhibit striking dysmorphism of craniofacial structures and spinal deformities. Notably, we find a significant reduction in osteoblast, chondrocyte, and collagen matrix markers. This work provides important insights to improve our understanding of the role of chd7 in skeletal development.


Subject(s)
Cartilage , DNA Helicases , Zebrafish Proteins , Zebrafish , Animals , Humans , Cartilage/metabolism , CHARGE Syndrome/genetics , CHARGE Syndrome/metabolism , CHARGE Syndrome/pathology , Chondrocytes/metabolism , Chondrogenesis/genetics , Collagen Type II/metabolism , Collagen Type II/genetics , DNA-Binding Proteins/metabolism , DNA-Binding Proteins/genetics , Gene Expression Regulation, Developmental , Skull/metabolism , Zebrafish/metabolism , Zebrafish/genetics , Zebrafish/embryology , Zebrafish Proteins/metabolism , Zebrafish Proteins/genetics
2.
Am J Med Genet A ; 194(6): e63561, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38352994

ABSTRACT

CHARGE syndrome is a rare autosomal dominant syndrome characterized by multiple congenital anomalies including coloboma, heart defects, ear anomalies, and developmental delay, caused by pathogenic variants in the CHD7 gene. The discovery of the molecular basis of this syndrome increased the number of cases reported and expanded the phenotype and clinical variability. Limb anomalies are occasional clinical findings in this syndrome, present in about 30% of reported cases. The occurrence of limb anomalies in this syndrome suggests that it should be considered as part of the phenotypic spectrum. Here, we describe an individual with CHARGE syndrome presenting unilateral monodactyly.


Subject(s)
CHARGE Syndrome , DNA Helicases , Phenotype , Humans , CHARGE Syndrome/genetics , CHARGE Syndrome/diagnosis , CHARGE Syndrome/pathology , CHARGE Syndrome/complications , DNA Helicases/genetics , DNA-Binding Proteins/genetics , Male , Female , Mutation , Limb Deformities, Congenital/genetics , Limb Deformities, Congenital/pathology , Limb Deformities, Congenital/diagnosis
3.
Hear Res ; 426: 108633, 2022 12.
Article in English | MEDLINE | ID: mdl-36288662

ABSTRACT

CHARGE syndrome is a multiple anomaly developmental disorder characterized by a variety of sensory deficits, including sensorineural hearing loss of unknown etiology. Most cases of CHARGE are caused by heterozygous pathogenic variants in CHD7, the gene encoding Chromodomain DNA-binding Protein 7 (CHD7), a chromatin remodeler important for the development of neurons and glial cells. Previous studies in the Chd7Gt/+ mouse model of CHARGE syndrome showed substantial neuron loss in the early stages of the developing inner ear that are compensated for by mid-gestation. In this study, we sought to determine if early developmental delays caused by Chd7 haploinsufficiency affect neurons, glial cells, and inner hair cell innervation in the mature cochlea. Analysis of auditory brainstem response recordings in Chd7Gt/+ adult animals showed elevated thresholds at 4 kHz and 16 kHz, but no differences in ABR Wave I peak latency or amplitude compared to wild type controls. Proportions of neurons in the Chd7Gt/+ adult spiral ganglion and densities of nerve projections from the spiral ganglion to the organ of Corti were not significantly different from wild type controls. Inner hair cell synapse formation also appeared unaffected in mature Chd7Gt/+ cochleae. However, histological analysis of adult Chd7Gt/+ cochleae revealed diminished satellite glial cells and hypermyelinated Type I spiral ganglion axons. We characterized the expression of CHD7 in developing inner ear glia and found CHD7 to be expressed during a tight window of inner ear development at the Schwann cell precursor stage at E9.5. While cochlear neurons appear to differentiate normally in the setting of Chd7 haploinsufficiency, our results suggest an important role for CHD7 in glial cells in the inner ear. This study highlights the dynamic nature of CHD7 activity during inner ear development in mice and contributes to understanding CHARGE syndrome pathology.


Subject(s)
CHARGE Syndrome , Ear, Inner , Mice , Animals , Spiral Ganglion/pathology , CHARGE Syndrome/genetics , CHARGE Syndrome/pathology , Chromatin , Ear, Inner/pathology , Neuroglia , DNA-Binding Proteins/genetics
4.
Nat Commun ; 12(1): 5702, 2021 09 29.
Article in English | MEDLINE | ID: mdl-34588434

ABSTRACT

Regulation of chromatin plays fundamental roles in the development of the brain. Haploinsufficiency of the chromatin remodeling enzyme CHD7 causes CHARGE syndrome, a genetic disorder that affects the development of the cerebellum. However, how CHD7 controls chromatin states in the cerebellum remains incompletely understood. Using conditional knockout of CHD7 in granule cell precursors in the mouse cerebellum, we find that CHD7 robustly promotes chromatin accessibility, active histone modifications, and RNA polymerase recruitment at enhancers. In vivo profiling of genome architecture reveals that CHD7 concordantly regulates epigenomic modifications associated with enhancer activation and gene expression of topologically-interacting genes. Genome and gene ontology studies show that CHD7-regulated enhancers are associated with genes that control brain tissue morphogenesis. Accordingly, conditional knockout of CHD7 triggers a striking phenotype of cerebellar polymicrogyria, which we have also found in a case of CHARGE syndrome. Finally, we uncover a CHD7-dependent switch in the preferred orientation of granule cell precursor division in the developing cerebellum, providing a potential cellular basis for the cerebellar polymicrogyria phenotype upon loss of CHD7. Collectively, our findings define epigenomic regulation by CHD7 in granule cell precursors and identify abnormal cerebellar patterning upon CHD7 depletion, with potential implications for our understanding of CHARGE syndrome.


Subject(s)
CHARGE Syndrome/genetics , Cerebellum/growth & development , DNA-Binding Proteins/metabolism , Gene Expression Regulation, Developmental , Polymicrogyria/genetics , Animals , CHARGE Syndrome/pathology , Cell Division/genetics , Cerebellum/pathology , Chromatin Assembly and Disassembly , DNA Helicases/genetics , DNA-Binding Proteins/genetics , Disease Models, Animal , Enhancer Elements, Genetic , Epigenesis, Genetic , Histone Code , Humans , Infant , Mice , Mice, Knockout , Mutation , Neural Stem Cells/metabolism , Neurons/metabolism , Polymicrogyria/pathology , RNA-Seq
5.
Am J Med Genet A ; 185(12): 3770-3783, 2021 12.
Article in English | MEDLINE | ID: mdl-34369642

ABSTRACT

Recognition of distinct phenotypic features is an important component of genetic diagnosis. Although CHARGE syndrome, Kabuki syndrome, and a recently delineated KMT2D Ex 38/39 allelic disorder exhibit significant overlap, differences on neuroimaging may help distinguish these conditions and guide genetic testing and variant interpretation. We present an infant clinically diagnosed with CHARGE syndrome but subsequently found to have a de novo missense variant in exon 38 of KMT2D, the gene implicated in both Kabuki syndrome and a distinct KMT2D allelic disorder. We compare her brain and inner ear morphology to a retrospective cohort of 21 patients with classic Kabuki syndrome and to typical CHARGE syndrome findings described in the literature. Thirteen of the 21 Kabuki syndrome patients had temporal bone imaging (5/13 CT, 12/13 MRI) and/or brain MRI (12/13) which revealed findings distinct from both CHARGE syndrome and the KMT2D allelic disorder. Our findings further elucidate the spectrum of inner ear dysmorphology distinguishing Kabuki syndrome and the KMT2D allelic disorder from CHARGE syndrome, suggesting that these three disorders may be differentiated at least in part by their inner ear anomalies.


Subject(s)
Abnormalities, Multiple/genetics , CHARGE Syndrome/genetics , DNA-Binding Proteins/genetics , Face/abnormalities , Genetic Predisposition to Disease , Hematologic Diseases/genetics , Neoplasm Proteins/genetics , Vestibular Diseases/genetics , Abnormalities, Multiple/diagnostic imaging , Abnormalities, Multiple/pathology , CHARGE Syndrome/diagnostic imaging , CHARGE Syndrome/pathology , DNA Helicases/genetics , Face/diagnostic imaging , Face/pathology , Female , Hematologic Diseases/diagnostic imaging , Hematologic Diseases/pathology , Histone Demethylases/genetics , Humans , Infant , Infant, Newborn , Male , Mutation/genetics , Neuroimaging , Phenotype , Retrospective Studies , Vestibular Diseases/diagnostic imaging , Vestibular Diseases/pathology
6.
Am J Med Genet A ; 185(7): 2160-2163, 2021 07.
Article in English | MEDLINE | ID: mdl-33844462

ABSTRACT

CHARGE syndrome is a rare genetic multiple-malformation disorder characterized by wide phenotypic variability. It is often caused by heterozygous variants in CHD7 and, more rarely, SEMA3E. Although craniofacial alterations are frequent in this condition, to date craniosynostosis is not considered part of the clinical spectrum. Here, we report bi-coronal craniosynostosis in a newborn affected by CHARGE syndrome caused by the de novo heterozygous c.6157C>T, p.(Arg2053*) CHD7 variant. We found two additional subjects in the literature with different craniosynostoses and distinct CHD7 alterations. The inclusion of CHD7-related CHARGE syndrome in the group of rare causes of syndromic craniosynostoses is proposed.


Subject(s)
CHARGE Syndrome/genetics , Craniosynostoses/genetics , DNA Helicases/genetics , DNA-Binding Proteins/genetics , Genetic Predisposition to Disease , CHARGE Syndrome/pathology , Craniosynostoses/pathology , Female , Heterozygote , Humans , Infant, Newborn , Mutation , Phenotype , Semaphorins/genetics
7.
J Hum Genet ; 66(10): 1021-1027, 2021 Oct.
Article in English | MEDLINE | ID: mdl-33640901

ABSTRACT

CDK9 has been considered a candidate gene involved in the CHARGE-like syndrome in a pair of cousins. We report an 8-year-old boy with a strikingly similar phenotype including facial asymmetry, microtia with preauricular tags and bilateral hearing loss, cleft lip and palate, cardiac dysrhythmia, and undescended testes. Joint contracture, no finger flexion creases, and large halluces were the same as those of a previously reported patient with homozygous CDK9 variants. The ocular phenotype included blepharophimosis, lacrimal duct obstruction, eyelid dermoids, Duane syndrome-like abduction deficit, and congenital cataracts. Optical coherence tomography and electroretinography evaluations revealed severe retinal dystrophy had developed at an early age. Trio-based whole-exome sequencing identified compound heterozygous variants in CDK9 [p.(A288T) of maternal origin and p.(R303C) of paternal origin] in the patient. Variants' kinase activities were reduced compared with wild type. We concluded that CDK9 biallelic variants cause a CHARGE-like malformation syndrome with retinal dystrophy as a distinguishing feature.


Subject(s)
Blepharophimosis/genetics , CHARGE Syndrome/genetics , Cyclin-Dependent Kinase 9/genetics , Retinal Dystrophies/genetics , Alleles , Blepharophimosis/diagnosis , Blepharophimosis/pathology , CHARGE Syndrome/diagnosis , CHARGE Syndrome/diagnostic imaging , CHARGE Syndrome/pathology , Child , Cleft Lip/diagnostic imaging , Cleft Lip/genetics , Cleft Lip/pathology , Cleft Palate/diagnostic imaging , Cleft Palate/genetics , Cleft Palate/pathology , Electroretinography , Homozygote , Humans , Lacrimal Duct Obstruction/diagnosis , Lacrimal Duct Obstruction/genetics , Lacrimal Duct Obstruction/pathology , Male , Mutation/genetics , Pedigree , Phenotype , Retinal Dystrophies/diagnosis , Retinal Dystrophies/diagnostic imaging , Retinal Dystrophies/pathology , Tomography, Optical Coherence , Exome Sequencing
8.
Am J Med Genet A ; 185(2): 544-548, 2021 02.
Article in English | MEDLINE | ID: mdl-33184947

ABSTRACT

Chromodomain helicase DNA-binding protein 7 (CHD7) pathogenic variants are identified in more than 90% of infants and children with CHARGE (Coloboma of the iris, retina, and/or optic disk; congenital Heart defects, choanal Atresia, Retardation of growth and development, Genital hypoplasia, and characteristic outer and inner Ear anomalies and deafness) syndrome. Approximately, 10% of cases have no known genetic cause identified. We report a male child with clinical features of CHARGE syndrome and nondiagnostic genetic testing that included chromosomal microarray, CHD7 sequencing and deletion/duplication analysis, SEMA3E sequencing, and trio exome and whole-genome sequencing (WGS). We used a comprehensive clinical assessment, genome-wide methylation analysis (GMA), reanalysis of WGS data, and CHD7 RNA studies to discover a novel variant that causes CHD7 haploinsufficiency. The 7-year-old Hispanic male proband has typical phenotypic features of CHARGE syndrome. GMA revealed a CHD7-associated epigenetic signature. Reanalysis of the WGS data with focused bioinformatic analysis of CHD7 detected a novel, de novo 15 base pair deletion in Intron 4 of CHD7 (c.2239-20_2239-6delGTCTTGGGTTTTTGT [NM_017780.3]). Using proband RNA, we confirmed that this novel deletion causes CHD7 haploinsufficiency by disrupting the canonical 3' splice site and introducing a premature stop codon. Integrated genomic, epigenomic, and transcriptome analyses discovered a novel CHD7 variant that causes CHARGE syndrome.


Subject(s)
CHARGE Syndrome/genetics , Choanal Atresia/genetics , Coloboma/genetics , DNA Helicases/genetics , DNA-Binding Proteins/genetics , Heart Defects, Congenital/genetics , CHARGE Syndrome/complications , CHARGE Syndrome/pathology , Child , Child, Preschool , Choanal Atresia/complications , Choanal Atresia/pathology , Coloboma/complications , Coloboma/pathology , Heart Defects, Congenital/complications , Heart Defects, Congenital/pathology , Humans , Infant , Introns/genetics , Male , Mutation/genetics , Phenotype , Exome Sequencing
9.
Am J Med Genet C Semin Med Genet ; 184(3): 611-617, 2020 09.
Article in English | MEDLINE | ID: mdl-32914532

ABSTRACT

To report ophthalmic findings of patients without colobomas, and with a clinical and molecular diagnosis of CHARGE Syndrome. Retrospective study of ophthalmic findings in 67 CHARGE patients-clinically confirmed diagnosis with positive CHD7 mutation-seen in the Ophthalmology department of Cincinnati Children's Hospital Medical Center between January 1, 2008 through September 25, 2018. Criteria for inclusion in this study was absence of any form of a coloboma in either eye. In our cohort, all patients had a positive CHD7 mutation, in addition to a clinical diagnosis. 19.4% (13/67) of CHARGE patients did not have a coloboma in either eye. 69.2% (9/13) had strabismus, 76.9% (10/13) had a refractive error that warranted refractive correction, 23.1% (3/13) had amblyopia, 38.5% (5/13) had nasolacrimal duct obstruction, 30.8% (4/13) had dry eye syndrome and exposure keratopathy, 15.4% (2/13) had ptosis, 15.4% (2/13) had blepharitis, 15.4% (2/13) had Cortical Visual Impairment, 7.7% (1/13) of patients had optic nerve drusen, 7.7% (1/13) had Marcus Gunn Jaw Winking, and 7.7% (1/13) with an eyelid nevus. There are numerous ophthalmic findings in individuals with CHARGE Syndrome without colobomas. No study to date has evaluated the ophthalmic findings in CHD7 positive CHARGE patients without colobomas. These findings need to be assessed and treated to ensure optimal vision in the CHARGE patient population. Absence of coloboma does not rule out a diagnosis of CHARGE syndrome, and if there is a clinical suspicion, clinical confirmation then genetic testing would be warranted.


Subject(s)
Blepharoptosis/genetics , CHARGE Syndrome/genetics , Coloboma/genetics , Heart Defects, Congenital/genetics , Jaw Abnormalities/genetics , Lacrimal Duct Obstruction/genetics , Nervous System Diseases/genetics , Reflex, Abnormal/genetics , Adolescent , Blepharoptosis/complications , Blepharoptosis/pathology , CHARGE Syndrome/complications , CHARGE Syndrome/pathology , Child , Child, Preschool , Coloboma/complications , Coloboma/pathology , DNA Helicases/genetics , DNA-Binding Proteins/genetics , Female , Heart Defects, Congenital/complications , Heart Defects, Congenital/pathology , Humans , Infant , Jaw Abnormalities/complications , Jaw Abnormalities/pathology , Lacrimal Duct Obstruction/complications , Lacrimal Duct Obstruction/pathology , Male , Mutation/genetics , Nasolacrimal Duct/metabolism , Nasolacrimal Duct/pathology , Nervous System Diseases/complications , Nervous System Diseases/pathology , Optic Nerve/metabolism , Optic Nerve/pathology
10.
Am J Med Genet A ; 182(8): 1939-1943, 2020 08.
Article in English | MEDLINE | ID: mdl-32476291

ABSTRACT

We present the case of a male who shortly after birth developed acute respiratory distress due to bilateral choanal atresia, following which he was found to have rectal stenosis. Genetic testing for CHARGE syndrome was negative, but whole genome sequencing identified heterozygosity for a pathogenic missense variant in TP63 (c.727C > T, p.(Arg243Trp). He also has partial cutaneous syndactyly of the third and fourth fingers of the right hand, and bilateral lacrimal duct stenosis/aplasia. A later maxillofacial review identified a palpable submucousal cleft and his scalp hair is blond and slightly sparse. Choanal atresia and rectal stenosis are recognized features of ectrodactyly-ectodermal dysplasia-clefting syndrome, but we believe this is the first report of a case presenting with these features in the absence of the cardinal features.


Subject(s)
Choanal Atresia/genetics , Cleft Lip/genetics , Cleft Palate/genetics , Ectodermal Dysplasia/genetics , Rectal Diseases/genetics , Respiratory Distress Syndrome/genetics , Transcription Factors/genetics , Tumor Suppressor Proteins/genetics , CHARGE Syndrome/diagnosis , CHARGE Syndrome/genetics , CHARGE Syndrome/pathology , Choanal Atresia/complications , Choanal Atresia/diagnosis , Choanal Atresia/pathology , Cleft Lip/complications , Cleft Lip/diagnosis , Cleft Lip/pathology , Cleft Palate/complications , Cleft Palate/diagnosis , Cleft Palate/pathology , Constriction, Pathologic/complications , Constriction, Pathologic/diagnosis , Constriction, Pathologic/genetics , Constriction, Pathologic/pathology , Ectodermal Dysplasia/complications , Ectodermal Dysplasia/diagnosis , Ectodermal Dysplasia/pathology , Genetic Predisposition to Disease , Hand Deformities, Congenital/genetics , Hand Deformities, Congenital/pathology , Heterozygote , Humans , Infant , Male , Mutation, Missense/genetics , Rectal Diseases/complications , Rectal Diseases/diagnosis , Rectal Diseases/pathology , Respiratory Distress Syndrome/complications , Respiratory Distress Syndrome/diagnosis , Respiratory Distress Syndrome/pathology , Whole Genome Sequencing
11.
Clin Genet ; 98(3): 231-239, 2020 09.
Article in English | MEDLINE | ID: mdl-32441320

ABSTRACT

Primary immune deficiencies are usually attributed to genetic defects and, therefore, frequently referred to as inborn errors of immunity (IEI). We subjected the genomic DNA of 333 patients with clinical signs of IEI to next generation sequencing (NGS) analysis of 344 immunity-related genes and, in some instances, additional genetic techniques. Genetic causes of the disease were identified in 69/333 (21%) of subjects, including 11/18 (61%) of children with syndrome-associated IEIs, 45/202 (22%) of nonsyndromic patients with Jeffrey Modell Foundation (JMF) warning signs, 9/56 (16%) of subjects with periodic fever, 3/30 (10%) of cases of autoimmune cytopenia, 1/21 (5%) of patients with unusually severe infections and 0/6 (0%) of individuals with isolated elevation of IgE level. There were unusual clinical observations: twins with severe immunodeficiency carried a de novo CHARGE syndrome-associated SEMA3E c.2108C>T (p.S703L) allele; however, they lacked clinical features of CHARGE syndrome. Additionally, there were genetically proven instances of Netherton syndrome, Х-linked agammaglobulinemia, severe combined immune deficiency (SCID), IPEX and APECED syndromes, among others. Some patients carried recurrent pathogenic alleles, such as AIRE c.769C>T (p.R257*), NBN c.657del5, DCLRE1C c.103C>G (p.H35D), NLRP12 c.1054C>T (p.R352C) and c.910C>T (p.H304Y). NGS is a powerful tool for high-throughput examination of patients with malfunction of immunity.


Subject(s)
Agammaglobulinemia/genetics , CHARGE Syndrome/genetics , Genetic Diseases, X-Linked/genetics , Primary Immunodeficiency Diseases/genetics , Severe Combined Immunodeficiency/genetics , Adolescent , Agammaglobulinemia/immunology , Agammaglobulinemia/pathology , CHARGE Syndrome/immunology , CHARGE Syndrome/pathology , Child , Child, Preschool , DNA-Binding Proteins/deficiency , DNA-Binding Proteins/genetics , DNA-Binding Proteins/immunology , Endonucleases/deficiency , Endonucleases/genetics , Endonucleases/immunology , Female , Genetic Diseases, X-Linked/immunology , Genetic Diseases, X-Linked/pathology , Genetic Predisposition to Disease , High-Throughput Nucleotide Sequencing , Humans , Infant , Male , Primary Immunodeficiency Diseases/immunology , Primary Immunodeficiency Diseases/pathology , Russia/epidemiology , Semaphorins/genetics , Semaphorins/immunology , Severe Combined Immunodeficiency/immunology , Severe Combined Immunodeficiency/pathology , Transcription Factors/deficiency , Transcription Factors/genetics , Transcription Factors/immunology , AIRE Protein
12.
Mol Genet Genomic Med ; 8(1): e1034, 2020 01.
Article in English | MEDLINE | ID: mdl-31691538

ABSTRACT

BACKGROUND: CHARGE syndrome is a complex multisystem genetic disease. We aimed to find the potential gene mutation in the labor induced fetus with CHARGE syndrome. METHODS: Genomic DNA was extracted from the fetal thigh muscle tissue and the peripheral blood of his parents. The resulting exomes were sequenced using whole exome sequencing (WES) followed by the selection of the candidate causative mutation genes. The deleteriousness of the identified variants was predicted. Analysis of multiple alignment of protein sequences and protein conserved domains was performed by online software. Finally, Sanger sequencing was applied for validation of the identified variants in the WES. RESULTS: After sequencing and bioinformatics filtering, a heterozygous missense mutation of SEMA3E (c.1327G>A; p. Ala443Thr) was found in the fetus, while the mutation was absent in his parents. Genotyping results showed that the mutation cosegregated fully with definite CHARGE phenotypes between the fetus and his parents. This change was located in the Sema superfamily and highly conserved across different species. Sanger validation result was consistent with the WES analysis. CONCLUSION: Our investigations suggested that the heterozygous missense mutation of SEMA3E (c.1327G>A; p. Ala443Thr) may be a potential causal variant in the fetus with CHARGE syndrome.


Subject(s)
CHARGE Syndrome/genetics , Fetus/abnormalities , Mutation, Missense , Semaphorins/genetics , Adult , CHARGE Syndrome/pathology , Female , Fetus/diagnostic imaging , Heterozygote , Humans , Semaphorins/chemistry
13.
Am J Med Genet C Semin Med Genet ; 184(1): 81-89, 2020 03.
Article in English | MEDLINE | ID: mdl-31833191

ABSTRACT

CHARGE syndrome is characterized by a pattern of congenital anomalies (Coloboma of the eye, Heart defects, Atresia of the choanae, Retardation of growth, Genital abnormalities, and Ear abnormalities). De novo mutations of chromodomain helicase DNA binding protein 7 (CHD7) are the primary cause of CHARGE syndrome. The clinical phenotype is highly variable including a wide spectrum of congenital heart defects. Here, we review the range of congenital heart defects and the molecular effects of CHD7 on cardiovascular development that lead to an over-representation of atrioventricular septal, conotruncal, and aortic arch defects in CHARGE syndrome. Further, we review the overlap of cardiovascular and noncardiovascular comorbidities present in CHARGE and their impact on the peri-operative morbidity and mortality in individuals with CHARGE syndrome.


Subject(s)
CHARGE Syndrome/genetics , DNA Helicases/genetics , DNA-Binding Proteins/genetics , Heart Defects, Congenital/genetics , CHARGE Syndrome/complications , CHARGE Syndrome/pathology , Genitalia/abnormalities , Heart Defects, Congenital/complications , Heart Defects, Congenital/pathology , Humans , Mutation/genetics
14.
Am J Med Genet A ; 182(1): 15-19, 2020 01.
Article in English | MEDLINE | ID: mdl-31729160

ABSTRACT

CHARGE syndrome (CS) is a multiple congenital anomalies condition with the majority of cases caused by dominant loss-of-function mutations of the CHD7 gene. It is clinically characterized by coloboma of the eyes, heart defects, choanal atresia, retardation of growth and/or development, genital and/or urinary anomalies and ear malformations associated with deafness and vestibular disorder(s). This case series reported nine molecularly confirmed Chinese CS patients from nine unrelated families in Hong Kong. Clinical phenotype and facial features of these nine Chinese CS patients together with four previously reported Chinese patients were reviewed. Typical presentations like coloboma and choanal atresia were not universally present. The prevalence of choanal atresia in these Chinese CS patients was found to be significantly lower than that in previous cohorts of other ethnic groups. This report highlighted the existence of phenotypic variation of CS among different ethnicities and suggested that a high index of suspicion is necessary for diagnosis of CS in Chinese patients.


Subject(s)
CHARGE Syndrome/genetics , Choanal Atresia/genetics , Coloboma/genetics , DNA Helicases/genetics , DNA-Binding Proteins/genetics , CHARGE Syndrome/pathology , Child , Child, Preschool , China/epidemiology , Choanal Atresia/pathology , Coloboma/pathology , Female , Hong Kong/epidemiology , Humans , Infant , Male , Mutation , Phenotype
15.
AJNR Am J Neuroradiol ; 40(12): 2154-2160, 2019 12.
Article in English | MEDLINE | ID: mdl-31649160

ABSTRACT

BACKGROUND AND PURPOSE: Coloboma of the eye, Heart defects, Atresia of the choanae, Retardation of growth and/or development, Genital and/or urinary abnormalities, and Ear abnormalities and deafness (CHARGE) syndrome is a multisystem developmental disorder associated with a number of well-described clinical and imaging findings, including cerebellar hypoplasia. We observed cerebellar heterotopias on MR imaging in 2 patients with CHARGE, confirmed by postmortem examination. We sought to determine the prevalence and define the characteristics of similar findings on MR imaging for a cohort of patients with CHARGE syndrome. MATERIALS AND METHODS: We performed a retrospective, observational, cross-sectional study to assess the prevalence and characteristic features of cerebellar heterotopias in 35 patients with CHARGE syndrome with available brain MR imaging studies, as well as to evaluate additional features of cerebellar dysgenesis. RESULTS: Cerebellar heterotopias were identified in 27/35 (77%) patients with CHARGE, characteristic in both location and appearance. Additional features of cerebellar dysgenesis were present in 31/34 evaluable patients (91%), including inferior vermian hypoplasia (90%), anteromedial rotation of the inferior tonsils (90%), and disorganized foliation of the cerebellar hemispheres (74%) or superior vermis (16%). CONCLUSIONS: Patients with CHARGE syndrome have a high prevalence of characteristic cerebellar heterotopias and disorganized foliation and abnormal cerebellar morphology, thereby expanding the phenotype of cerebellar dysgenesis in this syndrome.


Subject(s)
CHARGE Syndrome/pathology , Cerebellum/pathology , Adolescent , Child , Cross-Sectional Studies , Female , Humans , Male , Phenotype , Retrospective Studies
16.
Int J Exp Pathol ; 100(4): 234-243, 2019 08.
Article in English | MEDLINE | ID: mdl-31464029

ABSTRACT

CHARGE syndrome is a congenital disorder with multiple malformations in the craniofacial structures, and cardiovascular and genital systems, which are mainly affected by neural crest defects caused by loss-of-function mutations within chromodomain helicase DNA-binding protein 7 (CHD7). However, many patients with CHARGE syndrome test negative for CHD7. Semaphorin 3E (sema3E) is a gene reported to be mutated in patients with CHARGE syndrome. However, its role in the pathogenesis of CHARGE syndrome has not been verified experimentally. Here, we report that the knockdown of sema3E results in severe craniofacial malformations, including small eyes, defective cartilage and an abnormal number of otoliths in zebrafish embryos, which resemble the major features of CHARGE syndrome. Further analysis reveals that the migratory cranial neural crest cells are scattered in the region of the hindbrain, and the postmigratory neural crest cells are reduced in the pharyngeal arches upon sema3E knockdown. Notably, immunostaining and time-lapse imaging analyses of a neural crest cell-labelled transgenic fish line, sox10:EGFP, show that the migration of cranial neural crest cells is severely impaired, and many of these cells are misrouted upon sema3E knockdown. Furthermore, the sox10-expressing cranial neural crest cells are scattered in chd7 homozygous mutants, which phenocopied the phenotype in sema3E morphants. Overexpression of sema3E rescues the phenotype of scattered cranial neural crest cells in chd7 homozygotes, indicating that chd7 may control the expression of sema3E to regulate cranial neural crest cell migration. Collectively, our data demonstrate that sema3E is involved in the pathogenesis of CHARGE syndrome by modulating cranial neural crest cell migration.


Subject(s)
CHARGE Syndrome/genetics , CHARGE Syndrome/metabolism , Cell Movement , DNA Helicases/genetics , DNA Helicases/metabolism , Semaphorins/genetics , Semaphorins/metabolism , Zebrafish Proteins/genetics , Zebrafish Proteins/metabolism , Animals , Animals, Genetically Modified , CHARGE Syndrome/pathology , Gene Knockdown Techniques , Humans , Models, Animal , Neural Crest , Zebrafish/embryology
17.
Cochlear Implants Int ; 20(5): 266-280, 2019 09.
Article in English | MEDLINE | ID: mdl-31282293

ABSTRACT

Objective: CHARGE syndrome presents with a collection of congenital anomalies affecting multiple organs. Ear and temporal bone anomalies, including hearing loss are highly prevalent. We present an aid to management of this challenging condition and report the strategies and outcomes of cochlear implantation. Methods: Systematic review of Medline, EMBASE, Web of Science, CENTRAL and clinicaltrials.gov was performed up to 21/10/2018 The review and meta-analysis of studies were performed according to the PRISMA statement. Patient demographics, comorbidity, anatomical factors, details of cochlear implantation and audiological outcome were extracted and summarized. Anatomical and surgical factors were evaluated by meta-analysis. Audiological outcomes reported were too heterogeneous for meta-analysis. All statistics were calculated with SPSS v23.0 (IBM, New York, USA). Results: Thirty-one studies reported 165 cochlear implants in 156 patients with CHARGE syndrome. Temporal bone and facial nerve anomalies were common. Discussion: The assessment and management of patients with CHARGE syndrome undergoing cochlear implantation is challenging. Outcomes may be affected by cochlear nerve deficiency, inner ear anomalies, and developmental delay. Surgery is almost invariably complicated by abnormal anatomy, and increased incidence of complications. Conclusion: A careful, case-by-case assessment of an individual's requirements within a multi-disciplinary setup is essential for achieving the best possible outcome.


Subject(s)
CHARGE Syndrome/surgery , Cochlear Implantation/methods , Cochlear Nerve/abnormalities , Ear, Inner/abnormalities , Facial Nerve/abnormalities , Temporal Bone/abnormalities , CHARGE Syndrome/pathology , Child , Child, Preschool , Cochlear Implantation/adverse effects , Cochlear Nerve/surgery , Contraindications, Procedure , Ear, Inner/surgery , Facial Nerve/surgery , Female , Humans , Infant , Male , Temporal Bone/surgery , Treatment Outcome
18.
Neuroimage Clin ; 23: 101866, 2019.
Article in English | MEDLINE | ID: mdl-31154243

ABSTRACT

CHARGE syndrome (CS) is a rare congenital syndrome characterized by coloboma, heart anomaly, choanal atresia, retardation of growth and development, and genital and ear anomalies. While several neuroimaging studies have revealed abnormalities such as hypoplasia of the semicircular canal, olfactory nerve, cerebellum, and brainstem, no quantitative analysis of brain morphology in CS has been reported. We quantitatively investigated brain morphology in CS participants using structural magnetic resonance imaging (MRI) (N = 10, mean age 14.7 years old) and high-angular resolution diffusion MRI (HARDI) tractography (N = 8, mean age 19.4 years old) comparing with gender- and age-matched controls. Voxel-based analyses revealed decreased volume of the bilateral globus pallidus (left and right; p = 0.021 and 0.029), bilateral putamen (p = 0.016 and 0.011), left subthalamic nucleus (p = 0.012), bilateral cerebellum (p = 1.5 × 10-6 and 1.2 × 10-6), and brainstem (p = 0.031), and the enlargement of the lateral ventricles (p = 0.011 and 0.0031) bilaterally in CS. Surface-based analysis revealed asymmetrically increased cortical thickness in the right hemisphere (p = 0.013). The group-wise differences observed in global cortical volume, gyrification index, and left cortical thickness were not statistically significant. HARDI tractography revealed reduced volume, elongation, and higher ADC values in multiple fiber tracts in patients in CS compared to the controls, but FA values were not statistically significantly different between the two groups. Facial features are known to be asymmetric in CS, which has been recognized as an important symptom in CS. Our results revealed that the cortex in CS has an asymmetric appearance similar to the facial features. In addition, the signal pattern of high ADC with statistically unchanged FA values of tractography pathways indicated the presence of other pathogenesis than vasogenic edema or myelination dysfunction in developmental delay in CS.


Subject(s)
Brain/diagnostic imaging , Brain/pathology , CHARGE Syndrome/diagnostic imaging , CHARGE Syndrome/pathology , Adolescent , Child , Diffusion Tensor Imaging/methods , Female , Humans , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Male , Neuroimaging/methods , Young Adult
19.
Mol Genet Genomic Med ; 7(6): e730, 2019 06.
Article in English | MEDLINE | ID: mdl-31060112

ABSTRACT

BACKGROUND: 21-hydroxylase deficiency (21-OHD) is caused due to CYP21A2 gene variant. In males, the excess androgens produce varying degrees of penile enlargement and small testes. CHARGE syndrome (CS) has a broad spectrum of symptoms. In males, genital features such as micropenis and cryptorchidism are found in 48% of CS. There are no reports of patients with combined 21-OHD and CS; therefore, it is unknown whether the external genitalia shows penile enlargement or micropenis with/without cryptorchidism. CASE: A boy, born at 37 weeks and 5 days of gestational age with no consanguineous marriage, was admitted to our hospital due to congenital cleft lip, cleft palate, micropenis, cryptorchidism, and a ventricular septal defect. He had severe hyponatremia and hyperkalemia on day 10. He was diagnosed to have 21-OHD and CS. His external genitalia demonstrated both cryptorchidism and micropenis, but not penile enlargement. METHODS: DNA was extracted from peripheral leukocytes using standard procedures. Sanger sequence was performed in CYP21A2. Exome sequence was performed, and then, Sanger sequence was performed around variant in CHD7. RESULTS: Genetic screening for CYP21A2 gene was performed and compound heterozygous variants of c.293-13A/C>G (IVS2-13A/C>G) and c.518T>A (p.I172N) were detected in chromosome 6p21.3. His mother had been heterozygous variant of c.293-13A/C>G, and his father had been heterozygous variant of c.518T>A. Simultaneously, a de novo splicing acceptor alteration in c.7165-4 A>G, in chromodomain helicase DNA binding protein-7 (CHD7), located in chromosome 8q12 was detected, and the patient was diagnosed with 21-OHD and CS. CONCLUSION: Although these two disorders exhibit different modes of inheritance and their co-morbidity is extremely rare, we encountered one male patient who suffered from both 21-OHD and CS.


Subject(s)
CHARGE Syndrome/genetics , Cryptorchidism/genetics , DNA Helicases/genetics , DNA-Binding Proteins/genetics , Genital Diseases, Male/genetics , Penis/abnormalities , Steroid 21-Hydroxylase/genetics , CHARGE Syndrome/pathology , Cryptorchidism/pathology , Genital Diseases, Male/pathology , Humans , Infant , Male , Mutation , Penis/pathology
20.
Am J Med Genet A ; 179(8): 1459-1465, 2019 08.
Article in English | MEDLINE | ID: mdl-31134750

ABSTRACT

BACKGROUND: Growth retardation is one of the main hallmarks of CHARGE syndrome (CS), yet little is known about the body proportions of these children. Knowledge of body proportions in CS may contribute to a better characterization of this syndrome. This knowledge is important when considering starting growth-stimulating therapy. METHODS: For this cross-sectional study, we selected 32 children with CS and a CHD7 mutation at the Dutch CHARGE Family Day in 2016 or 2017 and the International CHARGE conference in Orlando, Florida, in 2017. We used photogrammetric anthropometry-a measurement method based on digital photographs-to determine various body proportions. We compared these to measurements in 21 normally proportioned children with growth hormone deficiency, using independent-samples t test, Mann-Whitney U test, or chi-square test as appropriate. RESULTS: Children with CS appear to have a shorter trunk in proportion to their height, head length, and arm length. Children with CS also had smaller feet proportional to tibia length compared to controls. The change of body proportions with age was similar in children with CS and controls. CONCLUSION: Body proportions in children with CS are significantly different from those of normally proportioned controls, but a similar change of body proportions with age was noted for both groups.


Subject(s)
Anthropometry/methods , CHARGE Syndrome/diagnosis , Photogrammetry/methods , Adolescent , Anthropometry/instrumentation , Body Height , CHARGE Syndrome/genetics , CHARGE Syndrome/pathology , Child , Child, Preschool , Cross-Sectional Studies , Female , Head/abnormalities , Humans , Male , Photogrammetry/instrumentation , Torso/abnormalities
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