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1.
Hum Cell ; 34(5): 1558-1568, 2021 Sep.
Article in English | MEDLINE | ID: mdl-34164774

ABSTRACT

Resistance to chemotherapy drugs is a major factor affecting the surgical outcome and prognosis of osteosarcoma patients. Circular RNAs (circRNAs) play an important role in tumor resistance to chemotherapy. In the present study, we aimed to investigate the role and mechanism of circRNA circ-chitinase 3-like 1.2 (CHI3L1.2) in resistance to cisplatin chemotherapy in osteosarcoma. We found that circ-CHI3L1.2 levels were higher in cisplatin-resistant cells than in their parent cells. circ-CHI3L1.2 knockdown decreased the half-maximal inhibitory concentration (IC50) of cisplatin and the expression levels of P-glycoprotein (P-gp), multidrug-resistance protein 1 (MRP1), and glutathione-S-transferase Pi1 (GSTP1), and promoted apoptosis of cisplatin-resistant osteosarcoma cells. In addition, circ-CHI3L1.2 knockdown induced mesenchymal to epithelial transition (MET) and suppressed cell migration and invasion. The competitive endogenous RNA (ceRNA) mechanism indicated that circ-CHI3L1.2 targets the micro-RNA (miR)-340-5p-lysophosphatidic acid acyltransferase ß (LPAATß) axis, and inhibition of miR-340-5p alleviates the effect of circ-CHI3L1.2 knockdown. In conclusion, circ-CHI3L1.2 levels were increased in cisplatin-resistant osteosarcoma cells and circ-CHI3L1.2 knockdown sensitized cisplatin-resistant osteosarcoma cells to cisplatin through the miR-340-5p-LPAATß axis.


Subject(s)
Acyltransferases/genetics , Acyltransferases/metabolism , Antineoplastic Agents/pharmacology , Bone Neoplasms/genetics , Bone Neoplasms/pathology , Chitinase-3-Like Protein 1/physiology , Chitinases/physiology , Cisplatin/pharmacology , Drug Resistance, Neoplasm/genetics , Gene Expression Regulation, Neoplastic/genetics , MicroRNAs/genetics , MicroRNAs/metabolism , Osteosarcoma/genetics , Osteosarcoma/pathology , Cell Line, Tumor , Chitinase-3-Like Protein 1/genetics , Chitinases/genetics , Humans
2.
Plant Sci ; 302: 110700, 2021 Jan.
Article in English | MEDLINE | ID: mdl-33288013

ABSTRACT

This work presents the biochemical, cytochemical and molecular studies on two groups of PR proteins, ß-1,3-glucanases and chitinases, and the arabinogalactan proteins (AGP) during the early stages of androgenesis induction in two breeding lines of rye (Secale cereale L.) with different androgenic potential. The process of androgenesis was initiated by tillers pre-treatments with low temperature, mannitol and/or reduced glutathione and resulted in microspores reprogramming and formation of androgenic structures what was associated with high activity of ß-1,3-glucanases and chitinases. Some isoforms of ß-1,3-glucanases, namely several acidic isoforms of about 26 kDa; appeared to be anther specific. Chitinases were well represented but were less variable. RT-qPCR revealed that the cold-responsive chitinase genes Chit1 and Chit2 were expressed at a lower level in the microspores and whole anthers while the cold-responsive Glu2 and Glu3 were not active. The stress pre-treatments modifications promoted the AGP accumulation. An apparent dominance of some AGP epitopes (LM2, JIM4 and JIM14) was detected in the androgenesis-responsive rye line. An abundant JIM13 epitopes in the vesicles and inner cell walls of the microspores and in the cell walls of the anther cell layers appeared to be the most specific for embryogenesis.


Subject(s)
Chitinases/physiology , Glucan Endo-1,3-beta-D-Glucosidase/physiology , Mucoproteins/physiology , Plant Proteins/physiology , Secale/metabolism , Chitinases/metabolism , Crop Production/methods , Flowers/growth & development , Glucan Endo-1,3-beta-D-Glucosidase/metabolism , Mucoproteins/metabolism , Plant Proteins/metabolism , Reproduction/physiology , Secale/enzymology , Secale/physiology , Stress, Physiological
3.
Sci Rep ; 10(1): 13377, 2020 08 07.
Article in English | MEDLINE | ID: mdl-32770153

ABSTRACT

Tight barriers are crucial for animals. Insect respiratory cells establish barriers through their extracellular matrices. These chitinous-matrices must be soft and flexible to provide ventilation, but also tight enough to allow oxygen flow and protection against dehydration, infections, and environmental stresses. However, genes that control soft, flexible chitin-matrices are poorly known. We investigated the genes of the chitinolytic glycosylhydrolase-family 18 in the tracheal system of Drosophila melanogaster. Our findings show that five chitinases and three chitinase-like genes organize the tracheal chitin-cuticles. Most of the chitinases degrade chitin from airway lumina to enable oxygen delivery. They further improve chitin-cuticles to enhance tube stability and integrity against stresses. Unexpectedly, some chitinases also support chitin assembly to expand the tube lumen properly. Moreover, Chitinase2 plays a decisive role in the chitin-cuticle formation that establishes taenidial folds to support tube stability. Chitinase2 is apically enriched on the surface of tracheal cells, where it controls the chitin-matrix architecture independently of other known cuticular proteins or chitinases. We suppose that the principle mechanisms of chitin-cuticle assembly and degradation require a set of critical glycosylhydrolases for flexible and not-flexible cuticles. The same glycosylhydrolases support thick laminar cuticle formation and are evolutionarily conserved among arthropods.


Subject(s)
Chitinases/genetics , Drosophila Proteins/genetics , Genes, Insect/genetics , Hydrolases/genetics , Respiratory System/enzymology , Animals , Chitin/metabolism , Chitinases/physiology , Drosophila Proteins/metabolism , Drosophila Proteins/physiology , Drosophila melanogaster/anatomy & histology , Drosophila melanogaster/enzymology , Drosophila melanogaster/genetics , Genes, Insect/physiology , Hydrolases/metabolism , Hydrolases/physiology , Oxygen/metabolism , Respiratory System/anatomy & histology , Trachea/anatomy & histology , Trachea/enzymology
4.
PLoS Pathog ; 16(5): e1008342, 2020 05.
Article in English | MEDLINE | ID: mdl-32365117

ABSTRACT

Chitinases are important enzymes that contribute to the generation of carbon and nitrogen from chitin, a long chain polymer of N-acetylglucosamine that is abundant in insects, fungi, invertebrates and fish. Although mammals do not produce chitin, chitinases have been identified in bacteria that are key virulence factors in severe respiratory, gastrointestinal and urinary diseases. However, it is unclear how these enzymes are able to carry out this dual function. Legionella pneumophila is the causative agent of Legionnaires' disease, an often-fatal pneumonia and its chitinase ChiA is essential for the survival of L. pneumophila in the lung. Here we report the first atomic resolution insight into the pathogenic mechanism of a bacterial chitinase. We derive an experimental model of intact ChiA and show how its N-terminal region targets ChiA to the bacterial surface after its secretion. We provide the first evidence that L. pneumophila can bind mucins on its surface, but this is not dependent on ChiA. This demonstrates that additional peripheral mucin binding proteins are also expressed in L. pneumophila. We also show that the ChiA C-terminal chitinase domain has novel Zn2+-dependent peptidase activity against mammalian mucin-like proteins, namely MUC5AC and the C1-esterase inhibitor, and that ChiA promotes bacterial penetration of mucin gels. Our findings suggest that ChiA can facilitate passage of L. pneumophila through the alveolar mucosa, can modulate the host complement system and that ChiA may be a promising target for vaccine development.


Subject(s)
Chitinases/metabolism , Legionella pneumophila/metabolism , Acetylglucosamine/metabolism , Bacterial Proteins/metabolism , Chitin/metabolism , Chitinases/physiology , Gene Expression Regulation, Bacterial/genetics , Legionnaires' Disease/metabolism , Metals , Mucin-1/metabolism , Mucins/metabolism , Proteolysis , Structure-Activity Relationship , Virulence Factors/metabolism
5.
Article in English | MEDLINE | ID: mdl-31751767

ABSTRACT

Millipedes represent a model for the study of organic matter transformation, animal-microbial interactions, and compartmentalisation of digestion. The activity of saccharidases (amylase, laminarinase, cellulase, xylanase, chitinase, maltase, cellobiase, and trehalase) and protease were measured in the midgut and hindgut contents and walls of the millipedes Archispirostreptus gigas and Epibolus pulchripes. Assays done at pH 4 and 7 confirmed activities of all enzymes except xylanase. Hydrolysing of starch and laminarin prevailed. The hindgut of E. pulchripes was shorter, less differentiated. Micro-apocrine secretion was observed only in the midgut of A. gigas. Merocrine secretion was present in midgut and hindgut of E. pulchripes, and in the pyloric valve and anterior hindgut of A. gigas. Alpha-polysaccharidases were mostly active in the midgut content and walls, with higher activity at pH 4. The low activity of amylase (A. gigas) and laminarinase (E. pulchripes) in midgut tissue may indicate their synthesis in salivary glands. Cellulases were found in midgut. Chitinases, found in midgut content and tissue (E. pulchripes) or concentrated in the midgut wall (A. gigas), were more active at an acidic pH. Polysaccharidases were low in hindguts. Protease shows midgut origin and alkaline activity extending to the hindgut in E. pulchripes, whereas in A. gigas it is of salivary gland origin and acid activity restricted to the midgut. Some disaccharidases, with more alkaline activity, showed less apparent midgut-hindgut differences. It may indicate an axial separating of the primary and secondary digestion along the intestinal pH gradient or the presence of enzymes of hindgut parasites.


Subject(s)
Arthropods/enzymology , Chitinases/metabolism , Animals , Arthropods/classification , Cellulase/metabolism , Chitinases/physiology , Gastrointestinal Tract/enzymology , Hydrogen-Ion Concentration , Peptide Hydrolases/metabolism , Polysaccharides/metabolism , Substrate Specificity
6.
Curr Protein Pept Sci ; 21(5): 497-506, 2020.
Article in English | MEDLINE | ID: mdl-31746293

ABSTRACT

Latex, a milky fluid found in several plants, is widely used for many purposes, and its proteins have been investigated by researchers. Many studies have shown that latex produced by some plant species is a natural source of biologically active compounds, and many of the hydrolytic enzymes are related to health benefits. Research on the characterization and industrial and pharmaceutical utility of latex has progressed in recent years. Latex proteins are associated with plants' defense mechanisms, against attacks by fungi. In this respect, there are several biotechnological applications of antifungal proteins. Some findings reveal that antifungal proteins inhibit fungi by interrupting the synthesis of fungal cell walls or rupturing the membrane. Moreover, both phytopathogenic and clinical fungal strains are susceptible to latex proteins. The present review describes some important features of proteins isolated from plant latex which presented in vitro antifungal activities: protein classification, function, molecular weight, isoelectric point, as well as the fungal species that are inhibited by them. We also discuss their mechanisms of action.


Subject(s)
Antifungal Agents/pharmacology , Chitinases/pharmacology , Latex/chemistry , Peptide Hydrolases/pharmacology , Peroxidases/pharmacology , Plant Lectins/pharmacology , Plant Proteins/pharmacology , Antifungal Agents/classification , Antifungal Agents/isolation & purification , Botrytis/drug effects , Botrytis/growth & development , Candida albicans/drug effects , Candida albicans/growth & development , Chitinases/classification , Chitinases/isolation & purification , Chitinases/physiology , Fusarium/drug effects , Fusarium/growth & development , Isoelectric Point , Microbial Sensitivity Tests , Molecular Weight , Peptide Hydrolases/classification , Peptide Hydrolases/isolation & purification , Peptide Hydrolases/physiology , Peroxidases/classification , Peroxidases/isolation & purification , Peroxidases/physiology , Plant Diseases/microbiology , Plant Extracts/chemistry , Plant Lectins/classification , Plant Lectins/isolation & purification , Plant Lectins/physiology , Plant Proteins/classification , Plant Proteins/isolation & purification , Plant Proteins/physiology , Plants/chemistry
7.
FEBS J ; 286(23): 4778-4796, 2019 12.
Article in English | MEDLINE | ID: mdl-31291689

ABSTRACT

Plant chitinases are enzymes that have several functions, including providing protection against pathogens. Agave tequilana is an economically important plant that is poorly studied. Here, we identified a chitinase from short reads of the A. tequilana transcriptome (AtChi1). A second chitinase, differing by only six residues from the first, was isolated from total RNA of plants infected with Fusarium oxysporum (AtChi2). Both enzymes were overexpressed in Escherichia coli and analysis of their sequences indicated that they belong to the class I glycoside hydrolase family19, whose members exhibit two domains: a carbohydrate-binding module and a catalytic domain, connected by a flexible linker. Activity assays and thermal shift experiments demonstrated that the recombinant Agave enzymes are highly thermostable acidic endochitinases with Tm values of 75 °C and 71 °C. Both exhibit a molecular mass close to 32 kDa, as determined by MALDI-TOF, and experimental pIs of 3.7 and 3.9. Coupling small-angle x-ray scattering information with homology modeling and docking simulations allowed us to structurally characterize both chitinases, which notably show different interactions in the binding groove. Even when the six different amino acids are all exposed to solvent in the loops located near the linker and opposite to the binding site, they confer distinct kinetic parameters against colloidal chitin and similar affinity for (GlnNAc)6, as shown by isothermal titration calorimetry. Interestingly, binding is more enthalpy-driven for AtChi2. Whereas the physiological role of these chitinases remains unknown, we demonstrate that they exhibit important antifungal activity against chitin-rich fungi such as Aspergillus sp. DATABASE: SAXS structural data are available in the SASBDB database with accession numbers SASDDE7 and SASDDA6. ENZYMES: Chitinases (EC3.2.1.14).


Subject(s)
Agave/enzymology , Chitinases/metabolism , Binding Sites , Chitinases/chemistry , Chitinases/physiology , Coumarins/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Molecular Dynamics Simulation , Protein Binding , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Temperature , Thermodynamics
8.
Adv Exp Med Biol ; 1142: 83-114, 2019.
Article in English | MEDLINE | ID: mdl-31102243

ABSTRACT

Chitin, the extracellular matrix polysaccharide of insects and arthropods is widely distributed in nature in all kingdoms of life and serves a variety of functions. After synthesis by membrane-bound chitin synthases, it is extensively remodeled before incorporation into divergent matrices with wide-ranging physical and biological properties. This chapter discusses the properties of a variety of insect enzymes and proteins involved in this process. Chitin remodeling involves chitin synthases, which make the nascent chitin chains, and chitin deacetylases that partially deacetylate some of the N-acetylglucosamine residues either randomly or sequentially to yield local chitosan-like regions. Other proteins secreted into the procuticle or the midgut help in the assembly of single chitin chains into larger crystalline aggregates that measure in a few 100 nanometers. They are further embedded in a complex matrix of cuticular proteins or become associated with proteins containing chitin-binding domains to constitute the laminar procuticle or the lattice-like peritrophic matrix. During molting, previously formed laminar cuticle or PM are decrystallized/depolymerized to unmask the chitin chains, which then are degraded by a mixture of chitinolytic enzymes consisting of chitinases and N-acetylglucosaminidases present in molting fluid or in gut secretions. Some of the degradation products may be recycled for the synthesis of new matrices. We present a model of chitin synthesis, assembly, and degradation and the roles of these chitin-remodeling enzymes in this overall process.


Subject(s)
Chitin/chemistry , Chitinases/physiology , Hexosaminidases/physiology , Insect Proteins/physiology , Insecta/physiology , Animals , Molting
9.
J Basic Microbiol ; 58(10): 848-856, 2018 Oct.
Article in English | MEDLINE | ID: mdl-30084496

ABSTRACT

Salinivibrio genus is commonly found in salted seafood products. In this study, chitinase produced by Salinivibrio sp. BAO-1801 isolated from salted fermented shrimp was purified and subsequently characterized. The molecular weight of BAO-1801 chitinase was approximately 94.2 kDa by SDS-PAGE analysis. It was classified as a chitinase C based on homology analysis of its N-terminal amino acid residues. This strain BAO-1801 chitinase was then used for synthesis of (GlcNAc)2. Degradation of colloidal chitin and N-acetyl chitooligosaccharides by BAO-1801 chitinase was then analyzed and (GlcNAc)2 was identified as the main product by thin layer chromatography and high-performance liquid chromatography. Effects of temperature and pH on activity and stability of BAO-1801 chitinase were also investigated. Furthermore, this enzyme inhibited fungal growth in a dose-dependent manner. Taken together, these results suggest that this Salinivibrio or its chitinase can be used for the enzymatic degradation of chitin to produce chitobiose in industrial process.


Subject(s)
Antifungal Agents/pharmacology , Bacterial Proteins/physiology , Chitinases/physiology , Disaccharides/biosynthesis , Food Microbiology , Vibrionaceae/enzymology , Amino Acid Sequence , Antifungal Agents/chemistry , Antifungal Agents/isolation & purification , Bacterial Proteins/chemistry , Bacterial Proteins/isolation & purification , Chitin/metabolism , Chitinases/chemistry , Chitinases/isolation & purification , Chitinases/metabolism , DNA, Bacterial/genetics , Disaccharides/metabolism , Enzyme Stability , Fungi/drug effects , Hydrogen-Ion Concentration , Molecular Weight , Phylogeny , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Substrate Specificity , Temperature , Vibrionaceae/classification , Vibrionaceae/genetics
10.
Infect Immun ; 86(7)2018 07.
Article in English | MEDLINE | ID: mdl-29712728

ABSTRACT

Chitin is a polysaccharide that provides structure and rigidity to the cell walls of fungi and insects. Mammals possess multiple chitinases, which function to degrade chitin, thereby supporting a role for chitinases in immune defense. However, chitin degradation has been implicated in the pathogenesis of asthma. Here, we determined the impact of acidic mammalian chitinase (AMCase) (Chia) deficiency on host defense during acute exposure to the fungal pathogen Aspergillus fumigatus as well as its contribution to A. fumigatus-associated allergic asthma. We demonstrate that chitin in the fungal cell wall was detected at low levels in A. fumigatus conidia, which emerged at the highest level during hyphal transition. In response to acute A. fumigatus challenge, Chia-/- mice unexpectedly demonstrated lower A. fumigatus lung burdens at 2 days postchallenge. The lower fungal burden correlated with decreased lung interleukin-33 (IL-33) levels yet increased IL-1ß and prostaglandin E2 (PGE2) production, a phenotype that we reported previously to promote the induction of IL-17A and IL-22. During chronic A. fumigatus exposure, AMCase deficiency resulted in lower dynamic and airway lung resistance than in wild-type mice. Improved lung physiology correlated with attenuated levels of the proallergic chemokines CCL17 and CCL22. Surprisingly, examination of inflammatory responses during chronic exposure revealed attenuated IL-17A and IL-22 responses, but not type 2 responses, in the absence of AMCase. Collectively, these data suggest that AMCase functions as a negative regulator of immune responses during acute fungal exposure and is a contributor to fungal asthma severity, putatively via the induction of proinflammatory responses.


Subject(s)
Aspergillus fumigatus/immunology , Chitinases/physiology , Pulmonary Aspergillosis/immunology , Animals , Asthma/immunology , Chemokines/analysis , Chitin/analysis , Female , Interleukin-33/analysis , Lung/immunology , Lung/microbiology , Lung/physiopathology , Macrophage Activation , Male , Mice , Mice, Inbred C57BL , Pulmonary Aspergillosis/physiopathology
11.
Mem. Inst. Oswaldo Cruz ; 113(2): 96-101, Feb. 2018. graf
Article in English | LILACS | ID: biblio-894899

ABSTRACT

BACKGROUND The insect chitinase gene family is composed by more than 10 paralogs, which can codify proteins with different domain structures. In Lutzomyia longipalpis, the main vector of visceral leishmaniasis in Brazil, a chitinase cDNA from adult female insects was previously characterized. The predicted protein contains one catalytic domain and one chitin-binding domain (CBD). The expression of this gene coincided with the end of blood digestion indicating a putative role in peritrophic matrix degradation. OBJECTIVES To determine the occurrence of alternative splicing in chitinases of L. longipalpis. METHODS We sequenced the LlChit1 gene from a genomic clone and the three spliced forms obtained by reverse transcription polymerase chain reaction (RT-PCR) using larvae cDNA. FINDINGS We showed that LlChit1 from L. longipalpis immature forms undergoes alternative splicing. The spliced form corresponding to the adult cDNA was named LlChit1A and the two larvae specific transcripts were named LlChit1B and LlChit1C. The B and C forms possess stop codons interrupting the translation of the CBD. The A form is present in adult females post blood meal, L4 larvae and pre-pupae, while the other two forms are present only in L4 larvae and disappear just before pupation. Two bands of the expected size were identified by Western blot only in L4 larvae. MAIN CONCLUSIONS We show for the first time alternative splicing generating chitinases with different domain structures increasing our understanding on the finely regulated digestion physiology and shedding light on a potential target for controlling L. longipalpis larval development.


Subject(s)
Animals , Chitinases/genetics , Reverse Transcriptase Polymerase Chain Reaction , Digestive System/enzymology , Chitinases/physiology , Alternative Splicing/genetics
12.
Biochem Soc Trans ; 46(1): 141-151, 2018 02 19.
Article in English | MEDLINE | ID: mdl-29351964

ABSTRACT

Chitinases and chitinase-like proteins (CLPs) belong to the glycoside hydrolase family 18 of proteins. Chitinases are expressed in mammals and lower organisms, facilitate chitin degradation, and hence act as host-defence enzymes. Gene duplication and loss-of-function mutations of enzymatically active chitinases have resulted in the expression of a diverse range of CLPs across different species. CLPs are genes that are increasingly associated with inflammation and tissue remodelling not only in mammals but also across distant species. While the focus has remained on understanding the functions and expression patterns of CLPs during disease in humans, studies in mouse and lower organisms have revealed important and overlapping roles of the CLP family during physiology, host defence and pathology. This review will summarise recent insights into the regulatory functions of CLPs on innate immune pathways and discuss how these effects are not only important for host defence and tissue injury/repair after pathogen invasion, but also how they have extensive implications for pathological processes involved in diseases such as asthma.


Subject(s)
Asthma/immunology , Chitinases/physiology , Immunity, Innate/physiology , Wound Healing/immunology , Animals , Asthma/pathology , Chitinases/genetics , Chitinases/metabolism , Gene Expression Regulation, Enzymologic , Host-Pathogen Interactions , Humans , Inflammation/enzymology , Inflammation/immunology , Inflammation/pathology , Mice
13.
Mem Inst Oswaldo Cruz ; 113(2): 96-101, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29236932

ABSTRACT

BACKGROUND The insect chitinase gene family is composed by more than 10 paralogs, which can codify proteins with different domain structures. In Lutzomyia longipalpis, the main vector of visceral leishmaniasis in Brazil, a chitinase cDNA from adult female insects was previously characterized. The predicted protein contains one catalytic domain and one chitin-binding domain (CBD). The expression of this gene coincided with the end of blood digestion indicating a putative role in peritrophic matrix degradation. OBJECTIVES To determine the occurrence of alternative splicing in chitinases of L. longipalpis. METHODS We sequenced the LlChit1 gene from a genomic clone and the three spliced forms obtained by reverse transcription polymerase chain reaction (RT-PCR) using larvae cDNA. FINDINGS We showed that LlChit1 from L. longipalpis immature forms undergoes alternative splicing. The spliced form corresponding to the adult cDNA was named LlChit1A and the two larvae specific transcripts were named LlChit1B and LlChit1C. The B and C forms possess stop codons interrupting the translation of the CBD. The A form is present in adult females post blood meal, L4 larvae and pre-pupae, while the other two forms are present only in L4 larvae and disappear just before pupation. Two bands of the expected size were identified by Western blot only in L4 larvae. MAIN CONCLUSIONS We show for the first time alternative splicing generating chitinases with different domain structures increasing our understanding on the finely regulated digestion physiology and shedding light on a potential target for controlling L. longipalpis larval development.


Subject(s)
Alternative Splicing/genetics , Chitinases/genetics , Digestive System/enzymology , Psychodidae/enzymology , Animals , Chitinases/physiology , Female , Phylogeny , Psychodidae/physiology , Reverse Transcriptase Polymerase Chain Reaction
14.
Sci Rep ; 6: 29022, 2016 06 29.
Article in English | MEDLINE | ID: mdl-27354165

ABSTRACT

Verticillium dahliae, a destructive and soil-borne fungal pathogen, causes massive losses in cotton yields. However, the resistance mechanism to V. dahilae in cotton is still poorly understood. Accumulating evidence indicates that chitinases are crucial hydrolytic enzymes, which attack fungal pathogens by catalyzing the fungal cell wall degradation. As a large gene family, to date, the chitinase genes (Chis) have not been systematically analyzed and effectively utilized in cotton. Here, we identified 47, 49, 92, and 116 Chis from four sequenced cotton species, diploid Gossypium raimondii (D5), G. arboreum (A2), tetraploid G. hirsutum acc. TM-1 (AD1), and G. barbadense acc. 3-79 (AD2), respectively. The orthologous genes were not one-to-one correspondence in the diploid and tetraploid cotton species, implying changes in the number of Chis in different cotton species during the evolution of Gossypium. Phylogenetic classification indicated that these Chis could be classified into six groups, with distinguishable structural characteristics. The expression patterns of Chis indicated their various expressions in different organs and tissues, and in the V. dahliae response. Silencing of Chi23, Chi32, or Chi47 in cotton significantly impaired the resistance to V. dahliae, suggesting these genes might act as positive regulators in disease resistance to V. dahliae.


Subject(s)
Chitinases/genetics , Genes, Plant , Gossypium/genetics , Multigene Family , Plant Proteins/genetics , Verticillium/physiology , Chitinases/physiology , Chromosome Mapping , Chromosomes, Plant/genetics , Diploidy , Disease Resistance/genetics , Gene Expression Regulation, Plant , Gene Silencing , Genome-Wide Association Study , Gossypium/classification , Gossypium/microbiology , Phylogeny , Plant Proteins/physiology , Species Specificity , Tetraploidy
15.
J Struct Biol ; 196(2): 107-118, 2016 11.
Article in English | MEDLINE | ID: mdl-26947209

ABSTRACT

Molluscan shells, consisting of calcium carbonate, are typical examples of biominerals. The small amount of organic matrices containing chitin and proteins in molluscan shells regulates calcification to produce elaborate microstructures. The shells of gastropods have a spiral shape around a central axis. The shell thickness on the internal side of the spiral becomes thinner than that on the outer side of the spiral during the growth to expand the interior space. These observations suggest that a dissolution process works as a remodeling mechanism to change shell shape in molluscan shells. To reveal the dissolution mechanism involved in the remodeling of gastropod spiral shells, we focused on chitinases in the fresh water snail Lymnaea stagnalis. Chitinase activity was observed in the acetic acid-soluble fraction of the shell and in the buffer extract from the mantle. Allosamidin, a specific inhibitor of family 18 chitinases, inhibited the chitinase activity of both fractions completely. Homology cloning and transcriptome analyses of the mantle revealed five genes (chi-I, chi-II, chi-III, chi-IV, and chi-V) encoding family 18 chitinases. All chitinases were expressed in the mantle and in other tissues suggesting that chitinases in the mantle have multiple-functions. Treatment with commercially available chitinase obtained from Trichoderma viride altered the shell microstructure of L. stagnalis. Larvae of L. stagnalis cultured in allosamidin solution had a thinner organic layer on the shell surface. These results suggest that the chitinase activities in the shell and mantle are probably associated with the shell formation process.


Subject(s)
Animal Shells/growth & development , Chitinases/physiology , Lymnaea/enzymology , Animal Shells/enzymology , Animals , Chitinases/genetics , Cloning, Molecular , Gene Expression Profiling , Lymnaea/anatomy & histology
16.
Biochemistry (Mosc) ; 80(9): 1109-16, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26555464

ABSTRACT

The role of chitin and its hydrolysis products generated by Vibrio cholerae chitinases in mechanisms of its adaptation in water environments, metabolism, preservation, acquisition of pathogenic potential, and its epidemiological value are reviewed. Chitin utilization by V. cholerae as a source of energy, carbon, and nitrogen is described. Chitin association promotes biofilm formation on natural chitinous surfaces, increasing V. cholerae resistance to adverse factors in ecological niches: the human body and water environments with its inhabitants. Hydrolytic enzymes regulated by the corresponding genes result in complete chitin biodegradation by a chitinolytic catabolic cascade. Consequences of V. cholerae cell and chitin interaction at different hierarchical levels include metabolic and physiological cell reactions such as chemotaxis, cell division, biofilm formation, induction of genetic competence, and commensalic and symbiotic mutual relations with higher organisms, nutrient cycle, pathogenicity for humans, and water organisms that is an example of successful interrelation of bacteria and substratum in the ecology of the microorganism.


Subject(s)
Biofilms/growth & development , Chitin/metabolism , Chitinases/physiology , Vibrio cholerae/physiology , Water Microbiology , Adaptation, Biological , Ecological and Environmental Phenomena , Humans , Vibrio cholerae/pathogenicity
17.
J Insect Physiol ; 70: 22-35, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25193546

ABSTRACT

Cockroaches are among the first insects to appear in the fossil record. This work is part of ongoing research on insects at critical points in the evolutionary tree to disclose evolutionary trends in the digestive characteristics of insects. A transcriptome (454 Roche platform) of the midgut of Periplanetaamericana was searched for sequences of digestive enzymes. The selected sequences were manually curated. The complete or nearly complete sequences showing all characteristic motifs and highly expressed (reads counting) had their predicted sequences checked by cloning and Sanger sequencing. There are two chitinases (lacking mucin and chitin-binding domains), one amylase, two α- and three ß-glucosidases, one ß-galactosidase, two aminopeptidases (none of the N-group), one chymotrypsin, 5 trypsins, and none ß-glucanase. Electrophoretic and enzymological data agreed with transcriptome data in showing that there is a single ß-galactosidase, two α-glucosidases, one preferring as substrate maltase and the other aryl α-glucoside, and two ß-glucosidases. Chromatographic and enzymological data identified 4 trypsins, one chymotrypsin (also found in the transcriptome), and one non-identified proteinase. The major digestive trypsin is identifiable to a major P. americana allergen (Per a 10). The lack of ß-glucanase expression in midguts was confirmed, thus lending support to claims that those enzymes are salivary. A salivary amylase was molecularly cloned and shown to be different from the one from the midgut. Enzyme distribution showed that most digestion occurs under the action of salivary and midgut enzymes in the foregut and anterior midgut, except the posterior terminal digestion of proteins. A counter-flux of fluid may be functional in the midgut of the cockroach to explain the low excretory rate of digestive enzymes. Ultrastructural and immunocytochemical localization data showed that amylase and trypsin are released by both merocrine and apocrine secretion mainly from gastric caeca. Finally, a discussion on Polyneoptera digestive physiology is provided.


Subject(s)
Digestion/physiology , Periplaneta/physiology , Aminopeptidases/genetics , Aminopeptidases/physiology , Animals , Base Sequence , Chitinases/genetics , Chitinases/physiology , Chymotrypsin/genetics , Chymotrypsin/physiology , Gastrointestinal Tract/anatomy & histology , Gastrointestinal Tract/diagnostic imaging , Glucosidases/genetics , Glucosidases/physiology , Microscopy, Electron , Molecular Sequence Data , Peptide Hydrolases/genetics , Peptide Hydrolases/physiology , Periplaneta/anatomy & histology , Periplaneta/enzymology , Periplaneta/genetics , Polymerase Chain Reaction , Transcriptome/genetics , Trypsin/genetics , Trypsin/physiology , Ultrasonography , beta-Galactosidase/genetics , beta-Galactosidase/physiology , beta-Glucosidase/genetics , beta-Glucosidase/physiology
18.
J Exp Biol ; 217(Pt 19): 3493-503, 2014 Oct 01.
Article in English | MEDLINE | ID: mdl-25189365

ABSTRACT

This study demonstrates that Amblyomma americanum (Aam) constitutively and ubiquitously expresses the long (L) and short (S) putative acidic chitinases (Ach) that are distinguished by a 210 base pair (bp) deletion in AamAch-S. Full-length AamAch-L and AamAch-S cDNA are 1959 and 1718 bp long, containing 1332 and 1104 bp open reading frames that code for 443 and 367 amino acid residues proteins with the former predicted to be extracellular and the latter intracellular. Both AamAch-L and AamAch-S mRNA are expressed in multiple organs as revealed by qualitative RT-PCR analysis. Furthermore, quantitative reverse transcription polymerase chain reaction analysis revealed that AamAch-L mRNA was downregulated in the mid-gut, but was unchanged in the salivary gland and in other organs in response to feeding. Of significant interest, AamAch-L and/or AamAch-S functions are probably associated with formation and/or maintenance of stability of A. americanum tick cement cone. Dual RNA interference silencing of AamAch-L and/or AamAch-S mRNA caused ticks to loosely attach onto host skin as suggested by bleeding around tick mouthparts and ticks detaching off host skin with a light touch. AamAch-L may apparently encode an inactive chitinase as indicated by Pichia pastoris-expressed recombinant AamAch-L failing to hydrolyse chitinase substrates. Unpublished related work in our laboratory, and published work by others that found AamAch-L in tick saliva, suggest that native AamAch-L is a non-specific immunoglobulin binding tick saliva protein in that rAamAch-L non-specifically bound rabbit, bovine and chicken non-immune sera. We discuss findings in this study with reference to advancing knowledge on tick feeding physiology.


Subject(s)
Chitinases/physiology , Feeding Behavior/physiology , Gene Silencing , Ixodidae/physiology , Amino Acid Sequence , Animals , Cattle , Chickens , Chitinases/genetics , Chitinases/metabolism , DNA, Complementary/genetics , Gene Expression Regulation , Ixodidae/enzymology , Ixodidae/genetics , Molecular Sequence Data , Phylogeny , RNA Interference , RNA, Messenger/genetics , Rabbits/parasitology , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, Protein
19.
Tuberk Toraks ; 61(1): 71-5, 2013.
Article in English | MEDLINE | ID: mdl-23581271

ABSTRACT

Chitinase enzymes that hydrolize chitin and some articficial substrates are expressed in human despite lacking of the endogenous chitin within the body. Chitinases phatophysiological functions within human are not fully known. Recent evidence revealed that chitinases may have role into some processes of immune responses and inflammatory system. In this review, we discuss the role of chitinases in lung diseases based on the available information from the literature.


Subject(s)
Chitinases/metabolism , Chitinases/physiology , Lung Diseases/enzymology , Chitin/metabolism , Humans , Hydrolysis
20.
Biochem Biophys Res Commun ; 431(1): 52-7, 2013 Feb 01.
Article in English | MEDLINE | ID: mdl-23291184

ABSTRACT

Human YKL39 (chitinase 3-like protein 2/CHI3L2) is a secreted 39kDa protein produced by articular chondrocytes and synoviocytes. Recent studies showed that hYKL-39 expression is increased in osteoarthritic articular chondrocytes suggesting the involvement of hYKL-39 in the progression of osteoarthritis (OA). However little is known regarding the molecular function of hYKL-39 in joint homeostasis. Sequence analyses indicated that hYKL-39 has significant identity with the human chitotorisidase family molecules, although it is considered that hYKL-39 has no enzymatic activity since it lacks putative chitinase catalytic motif. In this study, to examine the molecular function of hYKL-39 in chondrocytes, we overexpressed hYKL-39 in ATDC5 cells. Here we report that hYKL-39 enhances colony forming activity, cell proliferation, and type II collagen expression in these cells. These data suggest that hYKL-39 is a novel growth and differentiation factor involved in cartilage homeostasis.


Subject(s)
Cell Proliferation , Chitinases/physiology , Chondrocytes/physiology , Collagen Type II/biosynthesis , Animals , Cell Line , Chitinases/genetics , Chondrocytes/cytology , Chondrocytes/metabolism , G1 Phase , Homeostasis , Humans , Mice , Osteoarthritis/genetics , S Phase
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