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1.
Proc Natl Acad Sci U S A ; 116(6): 2118-2123, 2019 02 05.
Article in English | MEDLINE | ID: mdl-30670646

ABSTRACT

Reef-building corals thrive in nutrient-poor marine environments because of an obligate symbiosis with photosynthetic dinoflagellates of the genus Symbiodinium Symbiosis is established in most corals through the uptake of Symbiodinium from the environment. Corals are sessile for most of their life history, whereas free-living Symbiodinium are motile; hence, a mechanism to attract Symbiodinium would greatly increase the probability of encounter between host and symbiont. Here, we examined whether corals can attract free-living motile Symbiodinium by their green fluorescence, emitted by the excitation of endogenous GFP by purple-blue light. We found that Symbiodinium have positive and negative phototaxis toward weak green and strong purple-blue light, respectively. Under light conditions that cause corals to emit green fluorescence, (e.g., strong blue light), Symbiodinium were attracted toward live coral fragments. Symbiodinium were also attracted toward an artificial green fluorescence dye with similar excitation and emission spectra to coral-GFP. In the field, more Symbiodinium were found in traps painted with a green fluorescence dye than in controls. Our results revealed a biological signaling mechanism between the coral host and its potential symbionts.


Subject(s)
Cnidaria/metabolism , Cnidaria/microbiology , Dinoflagellida/physiology , Fluorescence , Symbiosis , Animals , Anthozoa/metabolism , Anthozoa/microbiology , Coral Reefs , Dinoflagellida/classification , Phylogeny
2.
Mar Drugs ; 16(9)2018 Aug 23.
Article in English | MEDLINE | ID: mdl-30142922

ABSTRACT

The phylum Cnidaria is an ancient branch in the tree of metazoans. Several species exert a remarkable longevity, suggesting the existence of a developed and consistent defense mechanism of the innate immunity capable to overcome the potential repeated exposure to microbial pathogenic agents. Increasing evidence indicates that the innate immune system in Cnidarians is not only involved in the disruption of harmful microorganisms, but also is crucial in structuring tissue-associated microbial communities that are essential components of the Cnidarian holobiont and useful to the animal's health for several functions, including metabolism, immune defense, development, and behavior. Sometimes, the shifts in the normal microbiota may be used as "early" bio-indicators of both environmental changes and/or animal disease. Here the Cnidarians relationships with microbial communities and the potential biotechnological applications are summarized and discussed.


Subject(s)
Cnidaria/physiology , Immunity, Innate , Microbiota/immunology , Symbiosis/immunology , Animals , Biotechnology/methods , Cnidaria/microbiology , Homeostasis/immunology , Mucous Membrane/immunology , Mucous Membrane/microbiology , Phylogeny
3.
PLoS Genet ; 14(7): e1007533, 2018 07.
Article in English | MEDLINE | ID: mdl-30059538

ABSTRACT

RNA interference (RNAi)-related pathways target viruses and transposable element (TE) transcripts in plants, fungi, and ecdysozoans (nematodes and arthropods), giving protection against infection and transmission. In each case, this produces abundant TE and virus-derived 20-30nt small RNAs, which provide a characteristic signature of RNAi-mediated defence. The broad phylogenetic distribution of the Argonaute and Dicer-family genes that mediate these pathways suggests that defensive RNAi is ancient, and probably shared by most animal (metazoan) phyla. Indeed, while vertebrates had been thought an exception, it has recently been argued that mammals also possess an antiviral RNAi pathway, although its immunological relevance is currently uncertain and the viral small RNAs (viRNAs) are not easily detectable. Here we use a metagenomic approach to test for the presence of viRNAs in five species from divergent animal phyla (Porifera, Cnidaria, Echinodermata, Mollusca, and Annelida), and in a brown alga-which represents an independent origin of multicellularity from plants, fungi, and animals. We use metagenomic RNA sequencing to identify around 80 virus-like contigs in these lineages, and small RNA sequencing to identify viRNAs derived from those viruses. We identified 21U small RNAs derived from an RNA virus in the brown alga, reminiscent of plant and fungal viRNAs, despite the deep divergence between these lineages. However, contrary to our expectations, we were unable to identify canonical (i.e. Drosophila- or nematode-like) viRNAs in any of the animals, despite the widespread presence of abundant micro-RNAs, and somatic transposon-derived piwi-interacting RNAs. We did identify a distinctive group of small RNAs derived from RNA viruses in the mollusc. However, unlike ecdysozoan viRNAs, these had a piRNA-like length distribution but lacked key signatures of piRNA biogenesis. We also identified primary piRNAs derived from putatively endogenous copies of DNA viruses in the cnidarian and the echinoderm, and an endogenous RNA virus in the mollusc. The absence of canonical virus-derived small RNAs from our samples may suggest that the majority of animal phyla lack an antiviral RNAi response. Alternatively, these phyla could possess an antiviral RNAi response resembling that reported for vertebrates, with cryptic viRNAs not detectable through simple metagenomic sequencing of wild-type individuals. In either case, our findings show that the antiviral RNAi responses of arthropods and nematodes, which are highly divergent from each other and from that of plants and fungi, are also highly diverged from the most likely ancestral metazoan state.


Subject(s)
Host Microbial Interactions/genetics , Metagenomics , RNA Interference/immunology , RNA Viruses/immunology , RNA, Viral/genetics , Animals , Annelida/genetics , Annelida/immunology , Annelida/microbiology , Argonaute Proteins/genetics , Cnidaria/genetics , Cnidaria/immunology , Cnidaria/microbiology , DNA Transposable Elements/genetics , Echinodermata/genetics , Echinodermata/immunology , Echinodermata/microbiology , Host Microbial Interactions/immunology , Mollusca/genetics , Mollusca/immunology , Mollusca/microbiology , Phaeophyceae/genetics , Phaeophyceae/immunology , Phaeophyceae/microbiology , Phylogeny , Porifera/genetics , Porifera/immunology , Porifera/microbiology , RNA Viruses/genetics , RNA, Small Interfering/genetics , RNA, Small Interfering/metabolism , RNA, Viral/immunology , Ribonuclease III/genetics , Sequence Analysis, RNA
4.
Sci Rep ; 8(1): 3237, 2018 02 19.
Article in English | MEDLINE | ID: mdl-29459692

ABSTRACT

Coral reef ecosystems rely on stable symbiotic relationship between the dinoflagellate Symbiodinium spp. and host cnidarian animals. The collapse of such symbiosis could cause coral 'bleaching' and subsequent host death. Despite huge interest on Symbiodinium, lack of mutant strains and readily available genetic tools have hampered molecular research. A major issue was the tolerance to marker antibiotics. Here, we isolated Symbiodinium mutants requiring uracil for growth, and hence, useful in transformation screening. We cultured Symbiodinium spp. cells in the presence of 5-fluoroorotic acid (5FOA), which inhibits the growth of cells expressing URA3 encoding orotidine-5'-monophosphate decarboxylase, and isolated cells that require uracil for growth. Sequence analyses and genetic complementation tests using yeast demonstrated that one of the mutant cell lines had a point mutation in URA3, resulting in a splicing error at an unusual exon-intron junction, and consequently, loss of enzyme activity. This mutant could maintain a symbiotic relationship with the model sea anemone Exaiptasia pallida only in sea water containing uracil. Results show that the URA3 mutant will be a useful tool for screening Symbiodinium transformants, both ex and in hospite, as survival in the absence of uracil is possible only upon successful introduction of URA3.


Subject(s)
Aquatic Organisms/physiology , Biosynthetic Pathways/genetics , Cnidaria/physiology , Dinoflagellida/physiology , Mutation , Symbiosis , Uracil/biosynthesis , Animals , Aquatic Organisms/genetics , Aquatic Organisms/growth & development , Aquatic Organisms/metabolism , Cnidaria/microbiology , Dinoflagellida/genetics , Dinoflagellida/growth & development , Dinoflagellida/metabolism , Genetic Testing/methods , Genetics, Microbial/methods , Sequence Analysis, DNA , Transformation, Genetic
5.
FEMS Microbiol Ecol ; 92(5): fiw064, 2016 May.
Article in English | MEDLINE | ID: mdl-27004797

ABSTRACT

In the present study, we compared communities of bacteria in two jellyfish species (the 'golden' jellyfish Mastigias cf.papua and the box jellyfish Tripedalia cf.cystophora) and water in three marine lakes located in the Berau region of northeastern Borneo, Indonesia. Jellyfish-associated bacterial communities were compositionally distinct and less diverse than bacterioplankton communities. Alphaproteobacteria, Gammaproteobacteria, Synechococcophycidae and Flavobacteriia were the most abundant classes in water. Jellyfish-associated bacterial communities were dominated by OTUs assigned to the Gammaproteobacteria (family Endozoicimonaceae), Mollicutes, Spirochaetes and Alphaproteobacteria (orders Kiloniellales and Rhodobacterales). Mollicutes were mainly restricted to Mastigias whereas Spirochaetes and the order Kiloniellales were most abundant in Tripedalia hosts. The most abundant OTU overall in jellyfish hosts was assigned to the family Endozoicimonaceae and was highly similar to organisms in Genbank obtained from various hosts including an octocoral, bivalve and fish species. Other abundant OTUs included an OTU assigned to the order Entomoplasmatales and mainly found in Mastigias hosts and OTUs assigned to the Spirochaetes and order Kiloniellales and mainly found in Tripedalia hosts. The low sequence similarity of the Entomoplasmatales OTU to sequences in Genbank suggests that it may be a novel lineage inhabiting Mastigias and possibly restricted to marine lakes.


Subject(s)
Bacteria/classification , Cnidaria/microbiology , Lakes/microbiology , Plankton/classification , Animals , Aquatic Organisms/microbiology , Bacteria/genetics , Bacteria/isolation & purification , Indonesia , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics
6.
PLoS One ; 10(5): e0126689, 2015.
Article in English | MEDLINE | ID: mdl-25974111

ABSTRACT

Massive outbreaks are increasing all over the world, which are likely related to climate change. The North Adriatic Sea, a sub-basin of the Mediterranean Sea, is a shallow semi-closed sea receiving high nutrients inputs from important rivers. These inputs sustain the highest productive basin of the Mediterranean Sea. Moreover, this area shows a high number of endemisms probably due to the high diversity of environmental conditions and the conspicuous food availability. Here, we documented two massive mortalities (2009 and 2011) and the pattern of recovery of the affected biocoenoses in the next two years. Results show an impressive and fast shift of the benthic assemblage from a biocoenosis mainly composed of slow-growing and long-lived species to a biocoenosis dominated by fast-growing and short-lived species. The sponge Chondrosia reniformis, one of the key species of this assemblage, which had never been involved in previous massive mortality events in the Mediterranean Sea, reduced its coverage by 70%, and only few small specimens survived. All the damaged sponges, together with many associated organisms, were detached by rough-sea conditions, leaving large bare areas on the rocky wall. Almost three years after the disease, the survived specimens of C. reniformis did not increase significantly in size, while the bare areas were colonized by fast-growing species such as stoloniferans, hydrozoans, mussels, algae, serpulids and bryozoans. Cnidarians were more resilient than massive sponges since they quickly recovered in less than one month. In the study area, the last two outbreaks caused a reduction in the filtration efficiency of the local benthic assemblage by over 60%. The analysis of the times series of wave heights and temperature revealed that the conditions in summer 2011 were not so extreme as to justify severe mass mortality, suggesting the occurrence of other factors which triggered the disease. The long-term observations of a benthic assemblage in the NW Adriatic Sea allowed us to monitor its dynamics before, during and after the mortality event. The N Adriatic Sea responds quickly to climatic anomalies and other environmental stresses because of the reduced dimension of the basin. The long-term consequences of frequent mass mortality episodes in this area could promote the shift from biocoenoses dominated by slow-growing and long-lived species to assemblages dominated by plastic and short life cycle species.


Subject(s)
Cnidaria/physiology , Ecosystem , Porifera/physiology , Animals , Bacterial Physiological Phenomena , Climate Change , Cnidaria/growth & development , Cnidaria/microbiology , Mediterranean Sea , Porifera/growth & development , Porifera/microbiology , Seasons , Temperature
7.
Dev Comp Immunol ; 47(1): 36-51, 2014 Nov.
Article in English | MEDLINE | ID: mdl-24984114

ABSTRACT

The animal gut serves as a primary location for the complex host-microbe interplay that is essential for homeostasis and may also reflect the types of ancient selective pressures that spawned the emergence of immunity in metazoans. In this review, we present a phylogenetic survey of gut host-microbe interactions and suggest that host defense systems arose not only to protect tissue directly from pathogenic attack but also to actively support growth of specific communities of mutualists. This functional dichotomy resulted in the evolution of immune systems much more tuned for harmonious existence with microbes than previously thought, existing as dynamic but primarily cooperative entities in the present day. We further present the protochordate Ciona intestinalis as a promising model for studying gut host-bacterial dialogue. The taxonomic position, gut physiology and experimental tractability of Ciona offer unique advantages in dissecting host-microbe interplay and can complement studies in other model systems.


Subject(s)
Ciona intestinalis/microbiology , Gastrointestinal Tract/microbiology , Models, Animal , Animals , Biological Evolution , Chordata/immunology , Chordata/microbiology , Ciona intestinalis/growth & development , Cnidaria/immunology , Cnidaria/microbiology , Humans , Mammals/microbiology
8.
PLoS One ; 9(1): e87416, 2014.
Article in English | MEDLINE | ID: mdl-24475285

ABSTRACT

Stable cnidarian-dinoflagellate (genus Symbiodinium) endosymbioses depend on the regulation of nutrient transport between Symbiodinium populations and their hosts. It has been previously shown that the host cytosol is a nitrogen-deficient environment for the intracellular Symbiodinium and may act to limit growth rates of symbionts during the symbiotic association. This study aimed to investigate the cell proliferation, as well as ultrastructural and lipid compositional changes, in free-living Symbiodinium spp. (clade B) upon nitrogen (N)-deprivation. The cell proliferation of the N-deprived cells decreased significantly. Furthermore, staining with a fluorescent probe, boron dipyrromethane 493/503 (BODIPY 493/503), indicated that lipid contents progressively accumulated in the N-deprived cells. Lipid analyses further showed that both triacylglycerol (TAG) and cholesterol ester (CE) were drastically enriched, with polyunsaturated fatty acids (PUFA; i.e., docosahexaenoic acid, heneicosapentaenoic acid, and oleic acid) became more abundant. Ultrastructural examinations showed that the increase in concentration of these lipid species was due to the accumulation of lipid droplets (LDs), a cellular feature that have previously shown to be pivotal in the maintenance of intact endosymbioses. Integrity of these stable LDs was maintained via electronegative repulsion and steric hindrance possibly provided by their surface proteins. Proteomic analyses of these LDs identified proteins putatively involved in lipid metabolism, signaling, stress response and energy metabolism. These results suggest that LDs production may be an adaptive response that enables Symbiodinium to maintain sufficient cellular energy stores for survival under the N-deprived conditions in the host cytoplasm.


Subject(s)
Adaptation, Biological/physiology , Cnidaria/microbiology , Cytosol/metabolism , Dinoflagellida/growth & development , Lipid Metabolism/physiology , Symbiosis , Animals , Blotting, Western , Boron Compounds , Cell Proliferation , Chlorophyll/metabolism , Chlorophyll A , Cholesterol Esters/metabolism , Dinoflagellida/genetics , Dinoflagellida/ultrastructure , Electrophoresis, Polyacrylamide Gel , Gas Chromatography-Mass Spectrometry , Host-Pathogen Interactions , Microscopy, Electron, Transmission , Microscopy, Fluorescence , Nitrogen/deficiency , Oligonucleotides/genetics , Rosaniline Dyes , Species Specificity , Triglycerides/metabolism
9.
FEMS Microbiol Ecol ; 87(2): 315-29, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24117852

ABSTRACT

Many marine habitats, such as the surface and tissues of marine invertebrates, including corals, harbour diverse populations of microorganisms, which are thought to play a role in the health of their hosts and influence mutualistic and competitive interactions. Investigating the presence and stability of quorum sensing (QS) in these ecosystems may shed light on the roles and control of these bacterial communities. Samples of 13 cnidarian species were screened for the presence and diversity of N-acyl-homoserine lactones (AHLs; a prevalent type of QS molecule) using thin-layer chromatography and an Agrobacterium tumefaciens NTL4 biosensor. Ten of 13 were found to harbour species-specific, conserved AHL profiles. AHLs were confirmed in Anemonia viridis using liquid chromatography tandem mass spectrometry. To assess temporal role and stability, AHLs were investigated in A. viridis from intertidal pools over 16 h. Patterns of AHLs showed conserved profiles except for two mid-chain length AHLs, which increased significantly over the day, peaking at 20:00, but had no correlation with pool chemistry. Denaturing gel electrophoresis of RT-PCR-amplified bacterial 16S rRNA showed the presence of an active bacterial community that changed in composition alongside AHL profiles and contained a number of bands that affiliate with known AHL-producing bacteria. Investigations into the quorum sensing-controlled, species-specific roles of these bacterial communities and how these regulatory circuits are influenced by the coral host and members of the bacterial community are imperative to expand our knowledge of these interactions with respect to the maintenance of coral health.


Subject(s)
Acyl-Butyrolactones/metabolism , Cnidaria/metabolism , Animals , Bacteria/genetics , Bacteria/metabolism , Chromatography, Liquid , Chromatography, Thin Layer , Cnidaria/genetics , Cnidaria/microbiology , Mass Spectrometry , Quorum Sensing , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics
10.
Annu Rev Microbiol ; 67: 499-518, 2013.
Article in English | MEDLINE | ID: mdl-23808329

ABSTRACT

Most epithelia in animals are colonized by microbial communities. These resident microbes influence fitness and thus ecologically important traits of their hosts, ultimately forming a metaorganism consisting of a multicellular host and a community of associated microorganisms. Recent discoveries in the cnidarian Hydra show that components of the innate immune system as well as transcriptional regulators of stem cells are involved in maintaining homeostasis between animals and their resident microbiota. Here I argue that components of the innate immune system with its host-specific antimicrobial peptides and a rich repertoire of pattern recognition receptors evolved in early-branching metazoans because of the need to control the resident beneficial microbes, not because of invasive pathogens. I also propose a mutual intertwinement between the stem cell regulatory machinery of the host and the resident microbiota composition, such that disturbances in one trigger a restructuring and resetting of the other.


Subject(s)
Cnidaria/immunology , Cnidaria/microbiology , Immunity, Innate , Microbiota , Animals , Bacteria/growth & development , Cnidaria/genetics , Humans , Receptors, Pattern Recognition/genetics , Receptors, Pattern Recognition/immunology , Symbiosis
11.
Biol Bull ; 223(1): 44-65, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22983032

ABSTRACT

The symbiotic associations between cnidarians and dinoflagellate algae (Symbiodinium) support productive and diverse ecosystems in coral reefs. Many aspects of this association, including the mechanistic basis of host-symbiont recognition and metabolic interaction, remain poorly understood. The first completed genome sequence for a symbiotic anthozoan is now available (the coral Acropora digitifera), and extensive expressed sequence tag resources are available for a variety of other symbiotic corals and anemones. These resources make it possible to profile gene expression, protein abundance, and protein localization associated with the symbiotic state. Here we review the history of "omics" studies of cnidarian-algal symbiosis and the current availability of sequence resources for corals and anemones, identifying genes putatively involved in symbiosis across 10 anthozoan species. The public availability of candidate symbiosis-associated genes leaves the field of cnidarian-algal symbiosis poised for in-depth comparative studies of sequence diversity and gene expression and for targeted functional studies of genes associated with symbiosis. Reviewing the progress to date suggests directions for future investigations of cnidarian-algal symbiosis that include (i) sequencing of Symbiodinium, (ii) proteomic analysis of the symbiosome membrane complex, (iii) glycomic analysis of Symbiodinium cell surfaces, and (iv) expression profiling of the gastrodermal cells hosting Symbiodinium.


Subject(s)
Alveolata/physiology , Cnidaria/microbiology , Genomics/methods , Metabolomics/methods , Proteomics/methods , Symbiosis , Alveolata/chemistry , Alveolata/genetics , Animals , Genomics/trends , Metabolomics/trends , Proteomics/trends
12.
Mar Pollut Bull ; 62(2): 364-70, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21040933

ABSTRACT

Eight marine-derived fungi that were previously selected for their abilities to decolorize RBBR dye were subjected to pyrene and benzo[a]pyrene degradation. The fungus Aspergillus sclerotiorum CBMAI 849 showed the best performance with regard to pyrene (99.7%) and benzo[a]pyrene (76.6%) depletion after 8 and 16 days, respectively. Substantial amounts of benzo[a]pyrene (>50.0%) depletion were also achieved by Mucor racemosus CBMAI 847. Therefore, these two fungal strains were subjected to metabolism evaluation using the HPLC-DAD-MS technique. The results showed that A. sclerotiorum CBMAI 849 and M. racemosus CBMAI 847 were able to metabolize pyrene to the corresponding pyrenylsulfate and were able to metabolize benzo[a]pyrene to benzo[a]pyrenylsulfate, suggesting that the mechanism of hydroxylation is mediated by a cytochrome P-450 monooxygenase, followed by conjugation with sulfate ions. Because these fungi were adapted to the marine environment, the strains that were used in the present study are considered to be attractive targets for the bioremediation of saline environments, such as ocean and marine sediments that are contaminated by PAHs.


Subject(s)
Fungi/metabolism , Polycyclic Aromatic Hydrocarbons/metabolism , Water Pollutants, Chemical/metabolism , Animals , Aspergillus/metabolism , Benzo(a)pyrene/analysis , Biodegradation, Environmental , Cnidaria/microbiology , Fungi/classification , Fungi/isolation & purification , Geologic Sediments/microbiology , Mucor/metabolism , Pyrenes/metabolism
13.
J Exp Bot ; 59(5): 1069-80, 2008.
Article in English | MEDLINE | ID: mdl-18267943

ABSTRACT

Animals acquire photosynthetically-fixed carbon by forming symbioses with algae and cyanobacteria. These associations are widespread in the phyla Porifera (sponges) and Cnidaria (corals, sea anemones etc.) but otherwise uncommon or absent from animal phyla. It is suggested that one factor contributing to the distribution of animal symbioses is the morphologically-simple body plan of the Porifera and Cnidaria with a large surface area:volume relationship well-suited to light capture by symbiotic algae in their tissues. Photosynthetic products are released from living symbiont cells to the animal host at substantial rates. Research with algal cells freshly isolated from the symbioses suggests that low molecular weight compounds (e.g. maltose, glycerol) are the major release products but further research is required to assess the relevance of these results to the algae in the intact symbiosis. Photosynthesis also poses risks for the animal because environmental perturbations, especially elevated temperature or irradiance, can lead to the production of reactive oxygen species, damage to membranes and proteins, and 'bleaching', including breakdown of the symbiosis. The contribution of non-photochemical quenching and membrane lipid composition of the algae to bleaching susceptibility is assessed. More generally, the development of genomic techniques to help understand the processes underlying the function and breakdown of function in photosynthetic symbioses is advocated.


Subject(s)
Cnidaria/physiology , Photosynthesis , Porifera/physiology , Symbiosis , Animals , Carbon/metabolism , Cnidaria/microbiology , Cyanobacteria/physiology , Eukaryota/physiology , Oxidative Stress , Photosynthesis/radiation effects , Porifera/microbiology , Symbiosis/radiation effects , Temperature
14.
Environ Technol ; 29(12): 1331-9, 2008 Dec.
Article in English | MEDLINE | ID: mdl-19149354

ABSTRACT

Marine-derived fungi represent a valuable source of structurally novel and biologically active metabolites of industrial interest. They also have drawn attention for their capacity to degrade several pollutants, including textile dyes, organochlorides and polycyclic aromatic hydrocarbons (PAHs), among others. The fungal tolerance to higher concentrations of salt might be considered an advantage for bioremediation processes in the marine environment. Therefore, filamentous fungi were isolated from cnidarians (scleractinian coral and zoanthids) collected from the north coast of São Paulo State, Brazil. A total of 144 filamentous fungi were morphologically and molecularly characterised. Among them there were several species of Penicillium and Aspergillus, in addition to Cladosporium spp., Eutypella sp., Fusarium spp., Khuskia sp., Mucor sp., Peacilomyces sp., Phoma sp. and Trichoderma spp. These fungi were tested regarding their decolourisation activity for Remazol Brilliant Blue R (RBBR), a textile dye used as an initial screening for PAH-degrading fungi. The most efficient fungi for RBBR decolourisation after 12 days were Penicillium citrinum CBMAI 853 (100%), Aspergillus sulphureus CBMAI 849 (95%), Cladosporium cladosporioides CBMAI 857 (93%) and Trichoderma sp. CBMAI 852 (89%). Besides its efficiency for dye decolourisation within liquid media, C. cladosporioides CBMAI 857 also decolourised dye on solid media, forming a decolourisation halo. Further research on the biotechnological potential, including studies on PAH metabolism, of these selected fungi are in progress.


Subject(s)
Anthraquinones/metabolism , Biodegradation, Environmental , Cnidaria/microbiology , Coloring Agents/metabolism , Fungi/isolation & purification , Fungi/metabolism , Animals , Aspergillus/isolation & purification , Aspergillus/metabolism , Brazil , Cladosporium/isolation & purification , Cladosporium/metabolism , Kinetics , Penicillium/isolation & purification , Penicillium/metabolism , Species Specificity , Trichoderma/isolation & purification , Trichoderma/metabolism
15.
Prog Mol Subcell Biol ; 42: 1-53, 2006.
Article in English | MEDLINE | ID: mdl-16805437

ABSTRACT

Sessile invertebrates evolved in a competitive milieu where space is a limiting resource, setting off an arms race between adults that must maintain clean surfaces and larvae that must locate and attach to a suitable substratum. I review the evidence that invertebrates chemically deter or kill the propagules of fouling animals and protists under natural conditions, and that chemosensory mechanisms may allow larvae to detect and avoid settling on chemically protected organisms. The fouling process is an ecologically complex web of interactions between basibionts, surface-colonizing microbes, and fouling larvae, all mediated by chemical signaling. Host-specific bacterial communities are maintained by many invertebrates, and may inhibit fouling by chemical deterrence of larvae, or by preventing biofilm formation by inductive strains. Larval settlement naturally occurs in a turbulent environment, yet the effects of waterborne versus surface-adsorbed chemical defenses have not been compared in flow, limiting our understanding of how larvae respond to toxic surfaces in the field. The importance of evaluating alternative hypotheses such as mechanical and physical defense is discussed, as is the need for ecologically relevant bioassays that quantify effects on larval behavior and identify compounds likely to play a defensive role in situ.


Subject(s)
Ecosystem , Invertebrates/physiology , Invertebrates/parasitology , Animals , Anti-Bacterial Agents/metabolism , Antiparasitic Agents/metabolism , Bacterial Physiological Phenomena , Biofilms/growth & development , Bryozoa/microbiology , Bryozoa/parasitology , Bryozoa/physiology , Cnidaria/microbiology , Cnidaria/parasitology , Cnidaria/physiology , Eukaryota/pathogenicity , Invertebrates/microbiology , Larva/pathogenicity , Marine Biology , Porifera/microbiology , Porifera/parasitology , Porifera/physiology , Signal Transduction , Urochordata/microbiology , Urochordata/parasitology , Urochordata/physiology
16.
Article in English | MEDLINE | ID: mdl-12781834

ABSTRACT

In many cnidarians, symbiotic algae live within host-derived symbiosomes. We determined whether a symbiosome membrane alters the response of isolated symbiotic algae to two signalling compounds that regulate algal carbon metabolism. Host release factor (HRF), which stimulates photosynthate release, and photosynthesis inhibiting factor (PIF), which inhibits photosynthetic carbon fixation, are found in homogenised tissue of the scleractinian coral Plesiastrea versipora. Compared with seawater controls, photosynthate release from isolated algae incubated in P. versipora homogenate for 2 h in the light was: 6 to 19-fold higher from its own algae (free of symbiosomes); 19 to 32-fold higher from Zoanthid robustus algae (within symbiosomes) and 3 to 24-fold higher from Z. robustus algae (free of symbiosomes); and from cultured algae (free of symbiosomes) was seven-fold higher from Montipora verrucosa and four-fold higher from Cassiopeia xamachana. Incubation of algae in P. versipora homogenate inhibited photosynthesis by: 33-49% in P. versipora algae; 29-47% in Z. robustus algae (regardless of whether or not the symbiosome was present); and 25% in M. verrucosa algae. In C. xamachana algae, photosynthesis increased. We conclude that the symbiosome is not essential for, yet does not block, the effects of HRF and PIF.


Subject(s)
Cnidaria/physiology , Eukaryota/physiology , Symbiosis , Animals , Carbon , Cell Membrane/chemistry , Cell Membrane/physiology , Cnidaria/microbiology , Eukaryota/isolation & purification , Fluorescent Dyes , Photosynthesis , Signal Transduction
17.
Environ Microbiol ; 4(7): 401-13, 2002 Jul.
Article in English | MEDLINE | ID: mdl-12123476

ABSTRACT

The bacterial community associated with black band disease (BBD) of the scleractinian corals Diploria strigosa, Montastrea annularis and Colpophyllia natans was examined using culture-independent techniques. Two complementary molecular screening techniques of 16S rDNA genes [amplified 16S ribosomal DNA restriction analysis (ARDRA) of clone libraries and denaturing gradient gel electrophoresis (DGGE)] were used to give a comprehensive characterization of the community. Findings support previous studies indicating low bacterial abundance and diversity associated with healthy corals. A single cyanobacterial ribotype was present in all the diseased samples, but this was not the same as that identified from Phormidium corallyticum culture isolated from BBD. The study confirms the presence of Desulfovibrio spp. and sulphate-reducing bacteria that have previously been associated with the BBD consortium. However, the species varied between diseased coral samples. We found no evidence of bacteria from terrestrial, freshwater or human sources in any of the samples. We report the presence of previously unrecognized potential pathogens [a Cytophaga sp. and an alpha-proteobacterium identified as the aetiological agent of juvenile oyster disease (JOD)] that were consistently present in all the diseased coral samples. The molecular biological approach described here gives an increasingly comprehensive and more precise picture of the bacterial population associated with BBD. To understand the pathogenesis of BBD, our attention should be focused on the pervasive ribotypes identified in this study (the Cyanobacterium sp., the Cytophaga sp. and the JOD pathogen).


Subject(s)
Bacteria/classification , Bacteria/pathogenicity , Cnidaria/microbiology , Ecosystem , Animals , Bacterial Typing Techniques , DNA Fingerprinting/methods , DNA, Bacterial/genetics , DNA, Bacterial/isolation & purification , DNA, Ribosomal/analysis , Electrophoresis, Polyacrylamide Gel/methods , Molecular Sequence Data , Phylogeny , RNA, Ribosomal, 16S/genetics , Seawater/microbiology , Sequence Analysis, DNA
18.
Proc Biol Sci ; 269(1497): 1205-10, 2002 Jun 22.
Article in English | MEDLINE | ID: mdl-12065035

ABSTRACT

Recent reports of worldwide coral bleaching events leading to devastating coral mortality have caused alarm among scientists and resource managers. Differential survival of coral species through bleaching events has been widely documented. We suggest that among the possible factors contributing to survival of coral species during such events are endolithic algae harboured in their skeleton, providing an alternative source of energy. We studied the dynamics of photosynthetic pigment concentrations and biomass of endoliths in the skeleton of the encrusting coral Oculina patagonica throughout a bleaching event. During repeated summer bleaching events these endolithic algae receive increased photosynthetically active radiation, increase markedly in biomass, and produce increasing amounts of photoassimilates, which are translocated to the coral. Chlorophyll concentrations and biomass of endoliths were 4.6 +/- 1.57 and 1570 +/- 427 microg cm(-2) respectively, in skeletons of relatively healthy colonies (0-40% bleaching) but up to 14.8 +/- 2.5 and 4036 +/- 764 microg cm(-2) endolith chlorophyll and biomass respectively, in skeletons of bleached colonies (greater than 40% bleaching). The translocation dynamics of (14)C-labelled photoassimilates from the endoliths to bleached coral tissue showed significantly higher 14C activity of the endoliths harboured within the skeletons of bleached corals than that of the endoliths in non-bleached corals. This alternative source of energy may be vital for the survivorship of O. patagonica, allowing gradual recruitment of zooxanthellae and subsequent recovery during the following winter.


Subject(s)
Chlorophyll/metabolism , Cnidaria/physiology , Eukaryota/growth & development , Photosynthesis , Animals , Biomass , Carbon Radioisotopes/metabolism , Cnidaria/microbiology , Symbiosis
19.
Environ Microbiol ; 4(6): 318-26, 2002 Jun.
Article in English | MEDLINE | ID: mdl-12071977

ABSTRACT

Coral bleaching and other diseases of corals have increased dramatically during the last few decades. As outbreaks of these diseases are highly correlated with increased sea-water temperature, one of the consequences of global warming will probably be mass destruction of coral reefs. The causative agent(s) of a few of these diseases have been reported: bleaching of Oculina patagonica by Vibrio shiloi; black band disease by a microbial consortium; sea-fan disease (aspergillosis) by Aspergillus sydowii; and coral white plague possibly by Sphingomonas sp. In addition, we have recently discovered that Vibrio coralyticus is the aetiological agent for bleaching the coral Pocillopora damicornis in the Red Sea. In the case of coral bleaching by V. shiloi, the major effect of increasing temperature is the expression of virulence genes by the pathogen. At high summer sea-water temperatures, V. shiloi produces an adhesin that allows it to adhere to a beta-galactoside-containing receptor in the coral mucus, penetrate into the coral epidermis, multiply intracellularly, differentiate into a viable-but-not-culturable (VBNC) state and produce toxins that inhibit photosynthesis and lyse the symbiotic zooxanthellae. In black band disease, sulphide is produced at the coral-microbial biofilm interface, which is probably responsible for tissue death. Reports of newly emerging coral diseases and the lack of epidemiological and biochemical information on the known diseases indicate that this will become a fertile area of research in the interface between microbial ecology and infectious disease.


Subject(s)
Bacteria , Cnidaria/microbiology , Fungi , Greenhouse Effect , Animals , Bacterial Physiological Phenomena , Cnidaria/cytology , Cnidaria/physiology , Seawater , Symbiosis , Temperature
20.
Proc Natl Acad Sci U S A ; 99(13): 8725-30, 2002 Jun 25.
Article in English | MEDLINE | ID: mdl-12077296

ABSTRACT

Populations of the shallow-water Caribbean elkhorn coral, Acropora palmata, are being decimated by white pox disease, with losses of living cover in the Florida Keys typically in excess of 70%. The rate of tissue loss is rapid, averaging 2.5 cm2 x day(-1), and is greatest during periods of seasonally elevated temperature. In Florida, the spread of white pox fits the contagion model, with nearest neighbors most susceptible to infection. In this report, we identify a common fecal enterobacterium, Serratia marcescens, as the causal agent of white pox. This is the first time, to our knowledge, that a bacterial species associated with the human gut has been shown to be a marine invertebrate pathogen.


Subject(s)
Cnidaria/microbiology , Serratia marcescens/pathogenicity , Animals , Microscopy, Electron, Scanning , Serratia marcescens/isolation & purification , Serratia marcescens/ultrastructure
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