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1.
J Mol Diagn ; 23(12): 1761-1773, 2021 12.
Article in English | MEDLINE | ID: mdl-34562615

ABSTRACT

CDK12 biallelic inactivation is associated with a distinct genomic signature of focal tandem duplications (FTDs). Gene fusions resulting from FTDs increase neoantigen load, raising interest in CDK12 as a biomarker of response to immune checkpoint inhibitors. Despite evidence of FTDs in multiple CDK12-altered cancer types, notably prostate and ovarian, report of fusion-associated neoantigen load is limited to prostate cancer. Molecular profiles were retrospectively reviewed for CDK12-biallelic (CDK12-biLOF) and -monoallelic loss-of-function (CDK12-monoLOF) in a primary cohort of >9000 tumors, representing 39 cancer types, and immune epitopes were predicted from fusions detected by whole transcriptome sequencing. CDK12-biLOF was identified for 0.3% tumors overall, most frequently in prostate cancer (4.7%). CDK12-biLOF tumors had higher mean fusion rates and fusion-associated neoantigen load than CDK12-monoLOF and CDK12-WT tumors (P < 0.01). However, concurrent mismatch repair deficiency/microsatellite instability with CDK12-biLOF associated with low fusion rates. Among CDK12-biLOF tumors, fusion-associated neoantigen load was highest in prostate and ovarian cancers, which correlated with distinct immune profiles. In a validation cohort, CDK12-biLOF tumors (0.4%) exhibited high mean fusion rates, particularly for prostate and ovarian tumors. Low fusion rates in other CDK12-biLOF tumor types warrant further investigation and highlight the value of quantitative biomarkers. Fusion rate and fusion-associated neoantigen load are linked to CDK12-biLOF in select cancers and may help to identify responders of immune checkpoint inhibitor therapy.


Subject(s)
Biomarkers, Tumor/genetics , Cyclin-Dependent Kinases/genetics , Neoplasms/genetics , Neoplasms/immunology , Adult , Aged , Aged, 80 and over , Alleles , Biomarkers, Tumor/immunology , Cyclin-Dependent Kinases/immunology , Epitopes/immunology , Female , Gene Fusion , HLA Antigens/genetics , Humans , Loss of Function Mutation , Male , Middle Aged , Neoplasms/pathology , Retrospective Studies , Tumor Microenvironment/genetics , Tumor Microenvironment/immunology
2.
Fish Shellfish Immunol ; 101: 277-283, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32276036

ABSTRACT

Cyclin dependent kinase-7 (Cdk-7) is a protein kinase associated with regulating the cell cycle, cell differentiation and proliferation, apoptosis and inflammatory response. This study characterized the full cDNA sequence of Cdk-7 in Pinctada fucata martensii (PmCdk-7). A full length sequence of 1473bp with an open reading frame (ORF) of 915bp and encodes a 304aa, 5'-UTR of 58bp and a 3'-UTR of 500bp was obtained. The construed amino acid sequence of PmCdk-7 comprised of a Serine/Threonine protein kinases, catalytic (S_TKc) domain with a protein kinases ATP-binding region signature (14-38aa) and the serine/Threonine protein kinases active-site signature (129-141aa) within the domain. Tissue distribution analysis revealed a high relative mRNA expression of PmCdk-7 within haemocytes. Following the insertion operation (grafting), the relative expression levels of PmCdk-7 in the haemocyte was expressed differentially among the studied groups; the black shell colored selected line (BS) and the control group (CG). High expression was recorded between 12 h and 5d with a peak at 3d suggesting a heightened level of DNA replication and inflammatory response during the pearl-sac formation and this expression was higher in BS than CS showcasing, the heightened immune capacity of BS to grafting operation. Immune stimulation experiment with bacterial endotoxin and a viral mimic revealed PmCdk-7 response to pathogenic stress. The results from our study showed that PmCdk-7 performs a vital function during the cell cycle by aiding DNA replication and also aid response to inflammations generated due to the incision from the grafting operation and long exposure to immune-stimulants (pathogens).


Subject(s)
Cyclin-Dependent Kinases/genetics , Cyclin-Dependent Kinases/immunology , Pinctada/genetics , Pinctada/immunology , Amino Acid Sequence , Animals , Aquaculture , Base Sequence , DNA, Complementary/analysis , Sequence Alignment
3.
Sci Immunol ; 4(40)2019 10 25.
Article in English | MEDLINE | ID: mdl-31653719

ABSTRACT

A promising way to restrain hazardous immune responses, such as autoimmune disease and allergy, is to convert disease-mediating T cells into immunosuppressive regulatory T (Treg) cells. Here, we show that chemical inhibition of the cyclin-dependent kinase 8 (CDK8) and CDK19, or knockdown/knockout of the CDK8 or CDK19 gene, is able to induce Foxp3, a key transcription factor controlling Treg cell function, in antigen-stimulated effector/memory as well as naïve CD4+ and CD8+ T cells. The induction was associated with STAT5 activation, independent of TGF-ß action, and not affected by inflammatory cytokines. Furthermore, in vivo administration of a newly developed CDK8/19 inhibitor along with antigen immunization generated functionally stable antigen-specific Foxp3+ Treg cells, which effectively suppressed skin contact hypersensitivity and autoimmune disease in animal models. The results indicate that CDK8/19 is physiologically repressing Foxp3 expression in activated conventional T cells and that its pharmacological inhibition enables conversion of antigen-specific effector/memory T cells into Foxp3+ Treg cells for the treatment of various immunological diseases.


Subject(s)
CD4-Positive T-Lymphocytes/immunology , Cyclin-Dependent Kinase 8/antagonists & inhibitors , Cyclin-Dependent Kinases/antagonists & inhibitors , Forkhead Transcription Factors/genetics , Protein Kinase Inhibitors/pharmacology , Pyridines/pharmacology , Pyrimidines/pharmacology , T-Lymphocytes, Regulatory/immunology , Animals , Antigens/immunology , Cells, Cultured , Cyclin-Dependent Kinase 8/deficiency , Cyclin-Dependent Kinase 8/immunology , Cyclin-Dependent Kinases/deficiency , Cyclin-Dependent Kinases/immunology , Forkhead Transcription Factors/immunology , Immunologic Memory/immunology , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mice, Inbred NOD , Mice, Knockout , Mice, Transgenic
4.
Front Immunol ; 10: 1988, 2019.
Article in English | MEDLINE | ID: mdl-31552016

ABSTRACT

Foxp3 expressing regulatory T (Treg) cells, as the central negative regulator of adaptive immune system, are essential to suppress immune response and maintain immune homeostasis. However, the function of Treg cells is frequently compromised in autoimmunity and hyper-activated in infections and tumor microenvironments. Thus, manipulating Treg cells becomes a promising therapeutic strategy for treating various diseases. Here we reported that inhibition of Cdk8/Cdk19 activity by small molecule inhibitors CCT251921 or Senexin A greatly promoted the differentiation of Treg cells and the expression of Treg signature genes, such as Foxp3, CTLA4, PD-1, and GITR. Mechanistically, we found that the augmented Treg cell differentiation was due to sensitized TGF-ß signaling by Cdk8/Cdk19 inhibition, which was associated with attenuation of IFN-γ-Stat1 signaling and enhancement of phosphorylated Smad2/3. Importantly, treatment with Cdk8/Cdk19 inhibitor CCT251921 significantly increased Treg population and ameliorated autoimmune symptoms in an experimental autoimmune encephalomyelitis (EAE) model. Taken together, our study reveals a novel role of Cdk8/Cdk19 in Treg cell differentiation and provides a potential target for Treg cell based therapeutics.


Subject(s)
Cyclin-Dependent Kinase 8/immunology , Cyclin-Dependent Kinases/immunology , Encephalomyelitis, Autoimmune, Experimental/immunology , T-Lymphocytes, Regulatory/immunology , Animals , Autoimmunity/immunology , Cell Differentiation/immunology , Cyclin-Dependent Kinase 8/metabolism , Cyclin-Dependent Kinases/metabolism , Lymphocyte Activation/immunology , Mice , Mice, Inbred C57BL , T-Lymphocytes, Regulatory/metabolism
5.
Curr Protein Pept Sci ; 20(1): 82-91, 2019.
Article in English | MEDLINE | ID: mdl-30264678

ABSTRACT

Programmed death ligand 1 (PD-L1) is a cell membrane protein that binds to programmed cell death protein 1 (PD-1) on the effector T cells and transduces immunosuppressive signals. It is now clear that the expression of the PD-L1 protein on the tumor cell surface is critical for tumor cells to escape immunosuppression. At present, more attention is focused on the transcriptional regulation of PDL1 mRNA. However, PD-L1 protein is the functional unit involved in immunotherapy response. It is essential to deeply understand how this membrane protein is regulated post-transcriptionally in tumors and immune cells. In this review, we summarize the recent progress on the translation, modification and transport of PD-L1 protein.


Subject(s)
Antibodies, Monoclonal/therapeutic use , B7-H1 Antigen/antagonists & inhibitors , Gene Expression Regulation, Neoplastic , Immunotherapy/methods , Neoplasms/therapy , Programmed Cell Death 1 Receptor/immunology , B7-H1 Antigen/genetics , B7-H1 Antigen/immunology , Cyclin-Dependent Kinases/genetics , Cyclin-Dependent Kinases/immunology , Humans , MicroRNAs/genetics , MicroRNAs/immunology , Neoplasms/genetics , Neoplasms/immunology , Neoplasms/pathology , Phosphatidylinositol 3-Kinases/genetics , Phosphatidylinositol 3-Kinases/immunology , Programmed Cell Death 1 Receptor/genetics , Protein Binding , Protein Biosynthesis , Protein Processing, Post-Translational , Protein Transport , Proto-Oncogene Proteins c-akt/genetics , Proto-Oncogene Proteins c-akt/immunology , Signal Transduction , TOR Serine-Threonine Kinases/genetics , TOR Serine-Threonine Kinases/immunology
6.
Mol Med Rep ; 16(5): 6340-6345, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28849059

ABSTRACT

The present study aimed to evaluate the inhibitory effects of an irinotecan derivative, ZBH­1208, on brain tumors, and to explore the underlying molecular mechanisms. To determine the effects of ZBH­1208, a brain tumor mouse model was established by transplanting B22 cells. Subsequently, the visceral indices of immune organs and white blood cell counts were determined, and the effects of ZBH­1208 on the expression levels of cell cycle­related proteins were assessed by western blotting. The tumor inhibition rates of 20 and 40 mg/kg ZBH­1208 were 11.7 and 54.1%, respectively. Compared with the negative control group, ZBH­1208 barely affected visceral indices or white blood cell count. Furthermore, the expression levels of p53, p21, cyclin­dependent kinase 7 (CDK7), Wee1, phosphorylated (p)­cell division cycle 2 (CDC2) (Tyr15), p­CDC2 (Thr161) and cyclin B1 proteins were upregulated, whereas the expression levels of cyclin E were downregulated, and those of CDC2, CDK2 and CDC25C were barely altered. In conclusion, the present study demonstrated that ZBH­1208 suppressed the growth of B22 mouse brain tumor xenografts, but did not affect their visceral indices or white blood cell counts. It was suggested that ZBH­1208 exerted its effects by regulating the expression of p53, p21, Wee1, p­CDC2 (Tyr15) and cyclin E proteins.


Subject(s)
Antineoplastic Agents, Phytogenic/pharmacology , Brain Neoplasms/drug therapy , Camptothecin/analogs & derivatives , Gene Expression Regulation, Neoplastic , Immunity, Innate/drug effects , Animals , Brain Neoplasms/genetics , Brain Neoplasms/immunology , Brain Neoplasms/pathology , CDC2 Protein Kinase/genetics , CDC2 Protein Kinase/immunology , Camptothecin/pharmacology , Cell Cycle Proteins/genetics , Cell Cycle Proteins/immunology , Cell Line, Tumor , Cyclin B1/genetics , Cyclin B1/immunology , Cyclin E/genetics , Cyclin E/immunology , Cyclin-Dependent Kinase Inhibitor p21/genetics , Cyclin-Dependent Kinase Inhibitor p21/immunology , Cyclin-Dependent Kinases/genetics , Cyclin-Dependent Kinases/immunology , Dose-Response Relationship, Drug , Drug Administration Schedule , Germ-Free Life , Irinotecan , Male , Mice , Mice, Inbred ICR , Neoplasm Transplantation , Nuclear Proteins/genetics , Nuclear Proteins/immunology , Protein-Tyrosine Kinases/genetics , Protein-Tyrosine Kinases/immunology , Signal Transduction , Tumor Suppressor Protein p53/genetics , Tumor Suppressor Protein p53/immunology , Cyclin-Dependent Kinase-Activating Kinase
7.
Arthritis Rheumatol ; 68(5): 1222-32, 2016 05.
Article in English | MEDLINE | ID: mdl-26663909

ABSTRACT

OBJECTIVE: Type I interferon (IFN) signaling is regarded as a central pathogenic pathway in systemic lupus erythematosus (SLE). Specific inhibition of this pathway is a core area for the development of new therapies for SLE. This study was undertaken to clarify the pathogenic mechanism involved and to identify new therapeutic targets, using a high-throughput screening platform to determine novel regulators that contribute to the overactivation of the type I IFN signaling pathway in SLE. METHODS: A high-throughput IFN-stimulated response element (ISRE)-luciferase assay was used to screen for candidate genes that regulate the IFN signaling pathway. Western blotting was used to confirm the regulatory function of CDK1. SYBR Green quantitative reverse transcriptase-polymerase chain reaction was used to detect the expression of individual IFN-stimulated genes (ISGs). The differential expression of CDK1 and ISGs in SLE patients and healthy controls was analyzed using RNA sequencing data and a microarray. RESULTS: The high-throughput ISRE-luciferase assay revealed that CDK1 enhanced type I IFN signaling. Consistent with this finding, CDK1 promoted the type I IFN-induced phosphorylation of STAT-1 and the up-regulated expression of ISGs. CDK1 expression was elevated in peripheral blood mononuclear cells (PBMCs) and kidney biopsy specimens from SLE patients and correlated positively with their IFN scores. A CDK1 inhibitor reduced the expression of ISGs in PBMCs from SLE patients and in renal cells from mice with lupus. CONCLUSION: Our findings indicate that CDK1 is a positive regulator of the IFN signaling pathway. The overexpression of CDK1 might contribute to the abnormally amplified type I IFN signaling in SLE, and the inhibition of CDK1 could be used to down-regulate type I IFN signaling in SLE.


Subject(s)
Cyclin-Dependent Kinases/metabolism , Interferon Type I/immunology , Kidney/metabolism , Leukocytes, Mononuclear/metabolism , Lupus Erythematosus, Systemic/metabolism , Lupus Nephritis/metabolism , STAT1 Transcription Factor/metabolism , Adult , Animals , Blotting, Western , CDC2 Protein Kinase , Cyclin-Dependent Kinases/antagonists & inhibitors , Cyclin-Dependent Kinases/immunology , Female , Gene Expression Regulation , HeLa Cells , Humans , Interferon Type I/drug effects , Kidney/drug effects , Leukocytes, Mononuclear/drug effects , Lupus Erythematosus, Systemic/genetics , Lupus Erythematosus, Systemic/immunology , Male , Mesangial Cells/drug effects , Mesangial Cells/metabolism , Mice , Middle Aged , Phosphorylation , Quinolines/pharmacology , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction/immunology , Thiazoles/pharmacology , Up-Regulation
8.
Vet Parasitol ; 211(3-4): 266-73, 2015 Jul 30.
Article in English | MEDLINE | ID: mdl-26073111

ABSTRACT

Among arthropods, ticks lead as vectors of animal diseases and rank second to mosquitoes in transmitting human pathogens. Cyclin-dependent kinases (CDK) participate in cell cycle control in eukaryotes. CDKs are serine/threonine protein kinases and these catalytic subunits are activated or inactivated at specific stages of the cell cycle. To determine the potential of using CDKs as anti-tick vaccine antigens, hamsters were immunized with recombinant Ixodes persulcatus CDK10, followed by a homologous tick challenge. Though it was not exactly unexpected, IpCDK10 vaccination significantly impaired tick blood feeding and fecundity, which manifested as low engorgement weights, poor oviposition, and a reduction in 80% of hatching rates. These findings may underpin the development of more efficacious anti-tick vaccines based on the targeting of cell cycle control proteins.


Subject(s)
Antigens/immunology , Cyclin-Dependent Kinases/immunology , Ixodes/physiology , Tick Infestations/prevention & control , Vaccines/immunology , Animals , Antigens/metabolism , Cricetinae , Cyclin-Dependent Kinases/metabolism , Escherichia coli/metabolism , Gene Expression Regulation , RNA/genetics , RNA/metabolism , Recombinant Proteins/immunology , Recombinant Proteins/metabolism , Transcriptome
9.
Sci Rep ; 4: 6102, 2014 Aug 18.
Article in English | MEDLINE | ID: mdl-25130377

ABSTRACT

To explore the histogenesis of cuboidal and polygonal tumor cells in the sclerosing hemangioma of lung (SHL), eighteen cases of SHL were retrospectively studied. SPB, p40, TTF-1,EMA,CKpan, vimentin,SMA, CgA,Syn and CD34 were immunohistochemically labeled by the EnVisionmethod. It was found that the four main types of structure in SHL were solid,papillary, hemorrhagic and sclerotic patterns. The tumor cells were composed mainly of two types of cells: cuboidal tumor cells and polygonal tumor cells. The immunohistochemistry showed that p40 was expressed only in cuboidal tumor cells. TTF-1 and EMA were expressed in both polygonal cells and cuboidal cells. SPB was also expressed in cuboidal tumor cells; vimentin was expressed in all polygonal tumor cells and some cuboidal cells. The findings suggest that the p40-positive cuboidal tumor cells may be pluripotent original respiratory epithelial cells, with multi-directional differentiation capacity.


Subject(s)
Cyclin-Dependent Kinases/metabolism , Lung Neoplasms/pathology , Pulmonary Sclerosing Hemangioma/pathology , Transcription Factors/biosynthesis , Tumor Suppressor Proteins/biosynthesis , Adult , Biomarkers, Tumor/genetics , Biomarkers, Tumor/immunology , Biomarkers, Tumor/metabolism , Cyclin-Dependent Kinases/genetics , Cyclin-Dependent Kinases/immunology , Female , Humans , Immunohistochemistry , Male , Middle Aged , Retrospective Studies , Transcription Factors/genetics , Tumor Suppressor Proteins/genetics , Cyclin-Dependent Kinase-Activating Kinase
10.
Nat Rev Immunol ; 14(4): 261-70, 2014 04.
Article in English | MEDLINE | ID: mdl-24603166

ABSTRACT

The proliferation of a few antigen-reactive lymphocytes into a large population of effector cells is a fundamental property of adaptive immunity. The cell division that fuels this process is driven by signals from antigen, co-stimulatory molecules and growth factor receptors, and is controlled by the cyclin-dependent kinase (CDK) cascade. In this Opinion article, we discuss how the CDK cascade provides one potential link between cell division and differentiation through the phosphorylation of immunologically relevant transcription factors, and how components of this pathway might ultimately participate in the decision between tolerance and immunity.


Subject(s)
Cell Differentiation/immunology , Cell Division/immunology , Cyclin-Dependent Kinases/immunology , Cyclin-Dependent Kinases/physiology , T-Lymphocytes/enzymology , T-Lymphocytes/immunology , Adaptive Immunity , Animals , Cell Cycle Checkpoints/immunology , Cyclin-Dependent Kinase Inhibitor p27/immunology , Humans , Immune Tolerance , Immunologic Memory , Immunotherapy , Models, Immunological , Signal Transduction/immunology , T-Lymphocytes/cytology
11.
J Exp Bot ; 64(18): 5661-71, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24127516

ABSTRACT

The importance of cell proliferation in plant growth and development has been well documented. The majority of studies on basic cell cycle mechanisms in plants have been at the level of gene expression and much less knowledge has accumulated in terms of protein interactions and activation. Two key proteins, cyclins and cyclin-dependent kinases (CDKs) are fundamental for cell cycle regulation and advancement. Our aim has been to understand the role of D-type cyclins and type A and B CDKs in the cell cycle taking place during a developmental process such as maize seed germination. Results indicate that three maize D-type cyclins-D2;2, D4;2, and D5;3-(G1-S cyclins by definition) bind and activate two different types of CDK-A and B1;1-in a differential way during germination. Whereas CDKA-D-type cyclin complexes are more active at early germination times than at later times, it was surprising to observe that CDKB1;1, a supposedly G2-M kinase, bound in a differential way to all D-type cyclins tested during germination. Binding to cyclin D2;2 was detectable at all germination times, forming a complex with kinase activity, whereas binding to D4;2 and D5;3 was more variable; in particular, D5;3 was only detected at late germination times. Results are discussed in terms of cell cycle advancement and its importance for seed germination.


Subject(s)
Cyclin D/metabolism , Cyclin-Dependent Kinases/metabolism , Germination/physiology , Plant Proteins/metabolism , Zea mays/growth & development , Zea mays/metabolism , Animals , Antibody Specificity , Cyclin D/immunology , Cyclin-Dependent Kinases/immunology , Multiprotein Complexes/metabolism , Plant Proteins/immunology , Rabbits
12.
Clin Exp Allergy ; 41(5): 673-87, 2011 May.
Article in English | MEDLINE | ID: mdl-21255143

ABSTRACT

BACKGROUND: Eosinophils are pro-inflammatory cells implicated in the pathogenesis of asthma and atopy. Apoptosis has been proposed as a potential mechanism underlying the resolution of eosinophilic inflammation and studies have indicated the ability of interventions that induce human eosinophil apoptosis to promote the resolution of eosinophilic inflammation. Recently, the cyclin-dependent kinase (CDK) inhibitor R-roscovitine was shown to enhance neutrophil apoptosis and promote the resolution of neutrophilic inflammation. OBJECTIVE: The purpose of this study was to examine the expression of CDKs in human blood eosinophils, the effects of R-roscovitine on eosinophil survival in vitro and whether R-roscovitine could influence eosinophilic lung inflammation in vivo. METHODS: Eosinophils were isolated from human peripheral blood and the effects of R-roscovitine on apoptosis, degranulation and phagocytic uptake examined in vitro. The effects of R-roscovitine on eosinophilic lung inflammation in vivo were also assessed using an ovalbumin mouse model. RESULTS: Our data demonstrate that human eosinophils express five known targets for R-roscovitine: CDK1, -2, -5, -7 and -9. R-roscovitine induced eosinophil apoptosis in a time- and concentration-dependent manner but also accelerated transition to secondary necrosis as assessed by microscopy, flow cytometry and caspase activation. In addition, we show that R-roscovitine can override the anti-apoptotic signals of GM-CSF and IL-5. We report that the pro-apoptotic effect of R-roscovitine is associated with suppression of Mcl-1L expression and that this compound enhanced phagocytic clearance of eosinophils by macrophages. Finally, we show that R-roscovitine induces apoptosis in murine peripheral blood and spleen-derived eosinophils; despite this, R-roscovitine did not modulate the tissue and lumen eosinophilia characteristic of the ovalbumin mouse model of airway eosinophilia. CONCLUSION AND CLINICAL RELEVANCE: These data demonstrate that R-roscovitine is capable of inducing rapid apoptosis and secondary necrosis in eosinophils but does not affect the onset or improve the resolution of eosinophilic airway inflammation in vivo.


Subject(s)
Apoptosis/drug effects , Cyclin-Dependent Kinases/antagonists & inhibitors , Eosinophils/cytology , Eosinophils/drug effects , Protein Kinase Inhibitors/pharmacology , Purines/pharmacology , Animals , Apoptosis/immunology , Cell Survival/drug effects , Cells, Cultured , Cyclin-Dependent Kinases/genetics , Cyclin-Dependent Kinases/immunology , Disease Models, Animal , Dose-Response Relationship, Drug , Eosinophils/immunology , Female , HeLa Cells , Humans , Mice , Mice, Inbred BALB C , Ovalbumin , Roscovitine , Time Factors
13.
Eur J Immunol ; 39(3): 820-5, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19189309

ABSTRACT

Significant morbidity and mortality can be attributed to inflammatory diseases; therefore, a greater understanding of the mechanisms involved in the progression of inflammation is crucial. Here, we demonstrate that p21((WAF1/CIP1)), an established suppressor of cell cycle progression, is a inhibitor of IL-1beta synthesis in macrophages. Mice deficient in p21 (p21(-/-)) display increased susceptibility to endotoxic shock, which is associated with increased serum levels of IL-1beta. Administration of IL-1 receptor antagonist reduces LPS-induced lethality in p21(-/-) mice. Analysis of isolated macrophages, which are one of the central producers of IL-1beta, reveals that deficiency for p21 led to more IL-1beta mRNA and pro-protein synthesis following TLR ligation. The increase in IL-1beta pro-protein is associated with elevated secretion of active IL-1beta by p21(-/-) macrophages. siRNA-mediated knockdown of p21 in human macrophages results in increased IL-1beta secretion as well. A peptide mapping strategy shows that the cyclin-dependent-kinase (CDK)-binding domain of p21 is sufficient to reduce the secretion of IL-1beta by p21(-/-) macrophages. These data suggest a novel role for p21 and specifically for the CDK-binding domain of p21((WAF1/CIP1)) in inhibiting inflammation.


Subject(s)
Cyclin-Dependent Kinase Inhibitor p21/immunology , Cyclin-Dependent Kinases/immunology , Inflammation/immunology , Interleukin-1beta/blood , Macrophages, Peritoneal/immunology , Monocytes/immunology , Animals , Cells, Cultured , Cyclin-Dependent Kinase Inhibitor p21/genetics , Cyclin-Dependent Kinase Inhibitor p21/metabolism , Cyclin-Dependent Kinases/metabolism , Humans , Inflammation/metabolism , Lipopolysaccharides/pharmacology , Macrophage Activation/drug effects , Macrophage Activation/immunology , Macrophages, Peritoneal/drug effects , Macrophages, Peritoneal/metabolism , Mice , Mice, Inbred C57BL , Mice, Knockout , Monocytes/drug effects , Monocytes/metabolism
14.
Plant Mol Biol ; 63(3): 365-79, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17063377

ABSTRACT

Leafy spurge (Euphorbia esula L.) is a deep-rooted perennial weed that propagates both by seeds and underground adventitious buds located on the crown and roots. To enhance our understanding of growth and development during seed germination and vegetative propagation, a leafy spurge gene (Accession No. AF230740) encoding a CDK-activating kinase (Ee;CDKF;1) involved in cell-cycle progression was identified, and its function was confirmed based on its ability to rescue a yeast temperature-sensitive CAK mutant (GF2351) and through in vitro kinase assays. Site-directed mutagenesis of Ee;CDKF;1 indicated that two threonine residues (Thr291 and Thr296) were mutually responsible for intra-molecular autophosphorylation and for phosphorylating its substrate protein, cyclin-dependent kinase (CDK). Polyclonal antibodies generated against the Ee;CDKF;1 protein or against a phosphorylated Ee;CDKF;1 peptide [NERYGSL(pT)SC] were used to examine abundance and phosphorylation of CDKF;1 during seed germination and bud growth. The levels of CDKF;1 were lower in dry or imbibed seeds than in germinating seeds or seedlings. Differences in CDKF;1 were also observed during adventitious bud development; small buds appeared to have greater levels of CDKF;1 than large buds. Similar patterns of CDKF;1 expression were detected with either the polyclonal antibody developed using the CDKF;1 protein or the phosphorylated peptide. These results indicated that Thr291 is constitutively phosphorylated in vivo and associated with Ee;CDKF;1 activity. Our results further suggest that a certain level of CDKF;1 activity is maintained in most tissues and may be an important phenomenon for enzymes that regulate early steps in cell-cycle signaling pathways.


Subject(s)
Cyclin-Dependent Kinases/metabolism , Euphorbia/enzymology , Euphorbia/growth & development , Amino Acid Sequence , Antibody Specificity , Cyclin-Dependent Kinases/chemistry , Cyclin-Dependent Kinases/genetics , Cyclin-Dependent Kinases/immunology , Euphorbia/genetics , Genes, Plant , Genetic Complementation Test , Germination , Molecular Sequence Data , Mutagenesis, Site-Directed , Phosphorylation , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/immunology , Recombinant Fusion Proteins/metabolism , Saccharomyces cerevisiae/enzymology , Saccharomyces cerevisiae/genetics , Sequence Homology, Amino Acid , Threonine/chemistry , Cyclin-Dependent Kinase-Activating Kinase
15.
Hybridoma (Larchmt) ; 24(2): 98-105, 2005 Apr.
Article in English | MEDLINE | ID: mdl-15857174

ABSTRACT

Monoclonal antibodies specific for the unique N-terminal domain of the PCTAIRE 3 protein kinase have been produced and characterized. The specificity of these antibodies has been assessed by ELISA, Western blot, and immunoflorescence techniques. These reagents are specific for recombinant PCTAIRE 3 of human origin and do not cross-react with PCTAIRE 1 or PCTAIRE 2, despite the high homology between members of the PCTAIRE subfamily of cdc2-like kinases. Immunoblotting of transfected cells reveals that all of the antibodies recognize both isoforms of the PCTAIRE 3 kinase. Epitope mapping reveals three distinct classes of PCTAIRE 3 antibodies that recognize different sites within an immunodominant region of the N-terminal domain of the protein. The creation of highly specific PCTAIRE 3 monoclonal reagents will be useful for assessing the native distribution and function of this protein.


Subject(s)
Antibodies, Monoclonal/immunology , Cyclin-Dependent Kinases/immunology , Amino Acid Sequence , Animals , Blotting, Western , COS Cells , Chlorocebus aethiops , Cyclin-Dependent Kinases/genetics , Epitope Mapping , Humans , Mice , Molecular Sequence Data , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/immunology , Sequence Alignment
16.
Respiration ; 72(1): 68-73, 2005.
Article in English | MEDLINE | ID: mdl-15753637

ABSTRACT

BACKGROUND: The p16(INK4) protein has been identified as a potent inhibitor of cyclin-dependent kinase (cdk)4 by blocking cdk4-mediated phosphorylation of the tumor suppressor retinoblastoma (Rb) protein, thus allowing Rb-mediated growth suppression. OBJECTIVES: Loss of p16(INK4) has been associated with a poor cancer prognosis, but its potential significance in bronchioloalveolar carcinomas (BACs) has not been explored. METHODS: We examined immunohistochemical expression of p16(INK4), cdk4, and Rb proteins in 38 BACs and correlated their expression levels with known clinicopathological features of the disease. RESULTS: All BACs expressed cdk4, while 89 and 82% expressed p16(INK4) and Rb proteins, respectively. None of the clinicopathological factors correlated with p16(INK4), cdk4, or Rb expression separately. A low p16(INK4)/cdk4 ratio was significantly associated with a high disease stage (p = 0.04), and the ratio tended to be lower in mucinous than nonmucinous tumors. BACs with a low p16(INK4)/cdk4 ratio showed significantly higher Rb expression levels (p = 0.02). Univariable survival analyses showed a significantly lower 5-year survival probability in patients with a high stage (p = 0.002) or low p16(INK4)/cdk4 ratio (p = 0.01). CONCLUSIONS: The results suggest a role of the cdk4/p16(INK4) pathway in the prognosis of BACs. Further studies are warranted to clarify whether a low p16(INK4)/cdk4 ratio may identify tumors that are destined to behave unfavorably.


Subject(s)
Adenocarcinoma, Bronchiolo-Alveolar/metabolism , Cyclin-Dependent Kinase Inhibitor p16/biosynthesis , Cyclin-Dependent Kinases/biosynthesis , Lung Neoplasms/metabolism , Proto-Oncogene Proteins/biosynthesis , Retinoblastoma Protein/biosynthesis , Adenocarcinoma, Bronchiolo-Alveolar/pathology , Aged , Antibodies, Monoclonal/immunology , Biomarkers, Tumor , Blotting, Western , Cyclin-Dependent Kinase 4 , Cyclin-Dependent Kinase Inhibitor p16/immunology , Cyclin-Dependent Kinases/immunology , Female , Humans , Immunohistochemistry , Lung Neoplasms/pathology , Male , Middle Aged , Neoplasm Staging , Prognosis , Proto-Oncogene Proteins/immunology , Pulmonary Alveoli/metabolism , Pulmonary Alveoli/pathology , Retinoblastoma Protein/immunology
17.
Methods Mol Biol ; 296: 279-90, 2005.
Article in English | MEDLINE | ID: mdl-15576939

ABSTRACT

All cyclin-dependent kinases (CDKs) involved in eukaryotic cell cycle control require phosphorylation at a conserved threonine (or serine) residue within the activation- or T-loop to attain full enzymatic activity. The enzyme responsible for this activating phosphorylation, the CDK-activating kinase (CAK), is therefore essential for proliferation of all eukaryotic cells. We describe methods to assess the T-loop phosphorylation state of the major mammalian CDKs in vivo; to measure the levels of CAK activity in cell-free extracts; and to analyze the abundance, subunit composition, and phosphorylation state of CAK complexes in metazoan cells. When derangement of normal CDK regulation is suspected as a cause of disturbed cell cycle progression, the combination of these methodologies can ascertain whether a primary CAK defect is the explanation.


Subject(s)
Cyclin-Dependent Kinases/analysis , Animals , Antibodies, Monoclonal , Binding Sites , Cell Cycle/physiology , Cyclin-Dependent Kinases/chemistry , Cyclin-Dependent Kinases/immunology , Cyclin-Dependent Kinases/metabolism , Electrophoresis, Polyacrylamide Gel , Electrophoretic Mobility Shift Assay , Humans , Immunoblotting , Immunoprecipitation , In Vitro Techniques , Mice , Phosphorylation , Cyclin-Dependent Kinase-Activating Kinase
18.
J Immunol ; 173(4): 2383-91, 2004 Aug 15.
Article in English | MEDLINE | ID: mdl-15294951

ABSTRACT

The specific functions of p57(Kip2) in lymphocytes have not yet been fully elucidated. In this study, it is shown that p57(Kip2), which is a member of the Cip/Kip family of cyclin-dependent kinase inhibitors, is present in the nuclei of normal resting (G(0)) T cells from peripheral blood and in the nuclei of the T cell-derived Jurkat cell line. Activation through the TCR results in rapid transport of cytoplasmic cyclin-dependent kinase 6 (cdk6) to nuclei, where it associates with cyclin D and p57(Kip2) in active enzyme complexes. Using purified recombinant proteins, it was shown in vitro that addition of p57(Kip2) protein to a mixture of cyclin D2 and cdk6 enhanced the association of the latter two proteins and resulted in phosphorylation of p57(Kip2). To probe further the function of p57(Kip2), Jurkat cells stably transfected with a plasmid encoding p57(Kip2) under control of an inducible (tetracycline) promoter were made. Induction of p57(Kip2) resulted in increased association of cdk6 with cyclin D3, without receptor-mediated T cell stimulation. The overall amounts of cdk6 and cyclin D3, and also of cdk4 and cyclin E, remained unchanged. Most notably, increased p57(Kip2) levels resulted in marked inhibition of both cyclin E- and cyclin A-associated cdk2 kinase activities and a decrease in cyclin A amounts. Therefore, although facilitating activation of cdk6, the ultimate outcome of p57(Kip2) induction was a decrease in DNA synthesis and cell proliferation. The results indicate that p57(Kip2) is involved in the regulation of several aspects of the T cell cycle.


Subject(s)
Cell Cycle/physiology , Lymphocyte Activation/immunology , Nuclear Proteins/immunology , T-Lymphocytes/physiology , Cyclin-Dependent Kinase 6 , Cyclin-Dependent Kinase Inhibitor p57 , Cyclin-Dependent Kinases/immunology , Cyclin-Dependent Kinases/metabolism , Cyclins/immunology , Cyclins/metabolism , Humans , Immunoblotting , Jurkat Cells , Precipitin Tests , Transfection
19.
J Immunol ; 173(5): 3093-102, 2004 Sep 01.
Article in English | MEDLINE | ID: mdl-15322169

ABSTRACT

Induction of G(1) arrest by TGF-beta correlates with the regulation of p21(Cip1) and p27(Kip1), members of the Cip/Kip family of cyclin-dependent kinase inhibitors (cki). However, no definitive evidence exists that these proteins play a causal role in TGF-beta(1)-induced growth arrest in lymphocytes. In this report we show the suppression of cell cycle progression by TGF-beta is diminished in T cells from mice deficient for both p21(Cip1) and p27(Kip1) (double-knockout (DKO)) only when activated under conditions of optimal costimulation. Although there is an IL-2-dependent enhanced proliferation of CD8(+) T cells from DKO mice, TGF-beta is able to maximally suppress the proliferation of DKO T cells when activated under conditions of low costimulatory strength. We also show that the induction of p15(Ink4b) in T cells stimulated in the presence of TGF-beta is not essential, as TGF-beta also efficiently suppressed proliferation of T cells from p15(Ink4b-/-) mice. Finally, although these cki are dispensable for the suppression of T cell proliferation by TGF-beta, we now describe a Smad3-dependent down-regulation of cdk4, suggesting a potential mechanism underlying to resistance of Smad3(-/-) T cells to the induction of growth arrest by TGF-beta. In summary, the growth suppressive effects of TGF-beta in naive T cells are a function of the strength of costimulation, and alterations in the expression of cki modify the sensitivity to TGF-beta by lowering thresholds for a maximal mitogenic response.


Subject(s)
Cell Cycle Proteins/metabolism , Cyclins/metabolism , G1 Phase/physiology , Interleukin-2/metabolism , Proto-Oncogene Proteins , T-Lymphocytes/metabolism , Transforming Growth Factor beta/metabolism , Tumor Suppressor Proteins/metabolism , Animals , Cell Cycle Proteins/immunology , Cyclin-Dependent Kinase 4 , Cyclin-Dependent Kinase Inhibitor p15 , Cyclin-Dependent Kinase Inhibitor p21 , Cyclin-Dependent Kinase Inhibitor p27 , Cyclin-Dependent Kinases/immunology , Cyclin-Dependent Kinases/metabolism , Cyclins/immunology , Down-Regulation , G1 Phase/immunology , Immunologic Memory/immunology , Immunologic Memory/physiology , Interleukin-2/immunology , Lymphoid Tissue/cytology , Lymphoid Tissue/immunology , Mice , Mice, Knockout , T-Lymphocytes/immunology , Transforming Growth Factor beta/immunology , Tumor Suppressor Proteins/immunology , Up-Regulation
20.
Nat Immunol ; 5(1): 31-7, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14647273

ABSTRACT

Antigen-driven CD8 memory T cell proliferation is more rapid than that of naive T cells, ensuring efficient control of the pathogen after reinfection. We show here that naive and memory cells are in different states of G0/G1 arrest. Naive cells are in a classical state of G0/G1 arrest, with high expression of p27Kip1 and low CDK6 and CDK2 kinase activity. In contrast, memory cells have low expression of p27Kip1 and high CDK6 kinase activity. This preactivated kinase is associated with cyclin D3 in the cytoplasm, and neutralization of these complexes with antibody to cyclin D3 blocks the rapid division of memory cells. Therefore G0/G1 memory cells are at a unique preactivated state that favors rapid division after antigen stimulation.


Subject(s)
CD8-Positive T-Lymphocytes/enzymology , Cyclin-Dependent Kinases/biosynthesis , Immunologic Memory/immunology , Animals , CD8-Positive T-Lymphocytes/cytology , CD8-Positive T-Lymphocytes/immunology , Cell Cycle Proteins/immunology , Cell Division/immunology , Cyclin D3 , Cyclin-Dependent Kinase 6 , Cyclin-Dependent Kinase Inhibitor p16/immunology , Cyclin-Dependent Kinase Inhibitor p27 , Cyclin-Dependent Kinases/immunology , Cyclins/antagonists & inhibitors , Cyclins/immunology , Cytoplasm/enzymology , Female , Flow Cytometry , G1 Phase/immunology , Male , Mice , Mice, Inbred C57BL , Mice, Transgenic , Microscopy, Phase-Contrast , Tumor Suppressor Proteins/immunology
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