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1.
Biochim Biophys Acta Mol Cell Res ; 1868(6): 118993, 2021 05.
Article in English | MEDLINE | ID: mdl-33647321

ABSTRACT

TDP-43 protein is found deposited as inclusions in the amyotrophic lateral sclerosis (ALS) patient's brain. The mechanism of neuron death in ALS is not fully deciphered but several TDP-43 toxicity mechanisms such as mis-regulation of autophagy, mitochondrial impairment and generation of oxidative stress etc., have been implicated. A predominantly nuclear protein, Cyclin C, can regulate the oxidative stress response via transcription of stress response genes and also by translocation to the cytoplasm for the activation of mitochondrial fragmentation-dependent cell death pathway. Using the well-established yeast TDP-43 proteinopathy model, we examined here whether upon TDP-43 aggregation, cell survival depends on the CNC1 gene that encodes the Cyclin C protein or other genes which encode proteins that function in conjunction with Cyclin C, such as DNM1, FIS1 and MED13. We show that the TDP-43's toxicity is significantly reduced in yeast deleted for CNC1 or DNM1 genes and remains unaltered by deletions of genes, FIS1 and MED13. Importantly, this rescue is observed only in presence of functional mitochondria. Also, deletion of the YBH3 gene involved in the mitochondria-dependent apoptosis pathway reduced the TDP-43 toxicity. Deletion of the VPS1 gene involved in the peroxisomal fission pathway did not mitigate the TDP-43 toxicity. Strikingly, Cyclin C-YFP was observed to relocate to the cytoplasm in response to TDP-43's co-expression which was prevented by addition of an anti-oxidant molecule, N-acetyl cysteine. Overall, the Cyclin C, Dnm1 and Ybh3 proteins are found to be important players in the TDP-43-induced oxidative stress-mediated cell death in the S. cerevisiae model.


Subject(s)
Amyotrophic Lateral Sclerosis/genetics , Cyclins/genetics , DNA-Binding Proteins/toxicity , Gene Deletion , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae/growth & development , Transcription Factors/genetics , Amyotrophic Lateral Sclerosis/chemically induced , Amyotrophic Lateral Sclerosis/metabolism , Cyclins/metabolism , Cytoplasm/metabolism , GTP Phosphohydrolases/genetics , GTP-Binding Proteins/genetics , Humans , Mediator Complex/genetics , Microbial Viability/drug effects , Mitochondrial Proteins/genetics , Oxidative Stress , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/metabolism , Transcription Factors/metabolism , Vesicular Transport Proteins/genetics
2.
J Mol Biol ; 433(10): 166953, 2021 05 14.
Article in English | MEDLINE | ID: mdl-33771571

ABSTRACT

Aberrant aggregation and amyloid formation of tar DNA binding protein (TDP-43) and α-synuclein (αS) underlie frontotemporal dementia (FTD) and Parkinson's disease (PD), respectively. Amyloid inclusions of TDP-43 and αS are also commonly co-observed in amyotrophic lateral sclerosis (ALS), dementia with Lewy bodies (DLB) and Alzheimer disease (AD). Emerging evidence from cellular and animal models show colocalization of the TDP-43 and αS aggregates, raising the possibility of direct interactions and co-aggregation between the two proteins. In this report, we set out to answer this question by investigating the interactions between αS and prion-like pathogenic C-terminal domain of TDP-43 (TDP-43 PrLD). PrLD is an aggregation-prone fragment generated both by alternative splicing as well as aberrant proteolytic cleavage of full length TDP-43. Our results indicate that two proteins interact in a synergistic manner to augment each other's aggregation towards hybrid fibrils. While monomers, oligomers and sonicated fibrils of αS seed TDP-43 PrLD monomers, TDP-43 PrLD fibrils failed to seed αS monomers indicating selectivity in interactions. Furthermore, αS modulates liquid droplets formed by TDP-43 PrLD and RNA to promote insoluble amyloid aggregates. Importantly, the cross-seeded hybrid aggregates show greater cytotoxicity as compared to the individual homotypic aggregates suggesting that the interactions between the two proteins have a discernable impact on cellular functions. Together, these results bring forth insights into TDP-43 PrLD - αS interactions that could help explain clinical and pathological presentations in patients with co-morbidities involving the two proteins.


Subject(s)
Amyloid/chemistry , DNA-Binding Proteins/chemistry , Neurons/drug effects , RNA/chemistry , alpha-Synuclein/chemistry , Alternative Splicing , Amyloid/genetics , Amyloid/metabolism , Amyloid/toxicity , Cell Line, Tumor , Cell Survival/drug effects , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , DNA-Binding Proteins/toxicity , Humans , Lipid Droplets/chemistry , Lipid Droplets/metabolism , Neurons/cytology , Neurons/metabolism , Prions/chemistry , Prions/genetics , Prions/metabolism , Prions/toxicity , Protein Aggregates/genetics , Protein Binding , Protein Domains , Proteolysis , RNA/genetics , RNA/metabolism , Sonication , alpha-Synuclein/genetics , alpha-Synuclein/metabolism , alpha-Synuclein/toxicity
3.
RNA Biol ; 18(11): 1546-1554, 2021 11.
Article in English | MEDLINE | ID: mdl-33427561

ABSTRACT

Pathological changes involving TDP-43 protein ('TDP-43 proteinopathy') are typical for several neurodegenerative diseases, including frontotemporal lobar degeneration (FTLD). FTLD-TDP cases are characterized by increased binding of TDP-43 to an abundant lncRNA, NEAT1, in the cortex. However it is unclear whether enhanced TDP-43-NEAT1 interaction represents a protective mechanism. We show that accumulation of human TDP-43 leads to upregulation of the constitutive NEAT1 isoform, NEAT1_1, in cultured cells and in the brains of transgenic mice. Further, we demonstrate that overexpression of NEAT1_1 ameliorates TDP-43 toxicity in Drosophila and yeast models of TDP-43 proteinopathy. Thus, NEAT1_1 upregulation may be protective in TDP-43 proteinopathies affecting the brain. Approaches to boost NEAT1_1 expression in the CNS may prove useful in the treatment of these conditions.


Subject(s)
Amyotrophic Lateral Sclerosis/prevention & control , Brain/metabolism , DNA-Binding Proteins/toxicity , Frontotemporal Dementia/prevention & control , Neuroblastoma/prevention & control , RNA, Long Noncoding/genetics , TDP-43 Proteinopathies/prevention & control , Amyotrophic Lateral Sclerosis/etiology , Amyotrophic Lateral Sclerosis/metabolism , Amyotrophic Lateral Sclerosis/pathology , Animals , Brain/pathology , Disease Models, Animal , Drosophila melanogaster , Frontotemporal Dementia/etiology , Frontotemporal Dementia/metabolism , Frontotemporal Dementia/pathology , Humans , Mice , Mice, Inbred C57BL , Mice, Transgenic , Neuroblastoma/etiology , Neuroblastoma/metabolism , Neuroblastoma/pathology , RNA, Long Noncoding/administration & dosage , Saccharomyces cerevisiae , TDP-43 Proteinopathies/etiology , TDP-43 Proteinopathies/metabolism , TDP-43 Proteinopathies/pathology
4.
Cells ; 9(10)2020 09 29.
Article in English | MEDLINE | ID: mdl-33003404

ABSTRACT

Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease caused by the progressive death of both upper and lower motor neurons. The disease presents a poor prognosis, and patients usually die 2-5 years after the onset of symptoms. The hallmark of this disease is the presence of phosphorylated and ubiquitinated aggregates containing trans-active response DNA-binding protein-43 (TDP-43) in the cytoplasm of motor neurons. TDP-43 pathology has been associated with multiple pathways in ALS, such as metabolic dysfunction found in patients and in in vivo models. Recently, it has been described as a "prion-like" protein, as studies have shown its propagation in cell culture from ALS brain extract or overexpressed TDP-43 in co-culture and conditioned medium, resulting in cytotoxicity. However, the cellular alterations that are associated with this cytotoxicity require further investigation. Here, we investigated the effects of conditioned medium from HEK293T (Human Embryonic Kidney 293T) cells overexpressing TDP-43 on cellular morphology, proliferation, death, and metabolism. Although we did not find evidence of TDP-43 propagation, we observed a toxicity of TDP-43-conditioned medium and altered metabolism. These results, therefore, suggest (1) that cells overexpressing TDP-43 produce an extracellular environment that can perturb other cells and (2) that TDP-43 propagation alone may not be the only potentially cytotoxic cell-to-cell mechanism.


Subject(s)
Amyotrophic Lateral Sclerosis/metabolism , Cell Death/drug effects , Cell Proliferation/drug effects , Culture Media, Conditioned/metabolism , DNA-Binding Proteins/metabolism , Metabolome/drug effects , Motor Neurons/metabolism , Amyotrophic Lateral Sclerosis/genetics , Cell Membrane/metabolism , Culture Media, Conditioned/toxicity , Cytoplasm/metabolism , DNA-Binding Proteins/genetics , DNA-Binding Proteins/toxicity , Glycolysis/drug effects , HEK293 Cells , Humans , Motor Neurons/pathology , Oxidative Phosphorylation/drug effects , Up-Regulation
6.
Acta Neuropathol Commun ; 7(1): 170, 2019 11 08.
Article in English | MEDLINE | ID: mdl-31703746

ABSTRACT

Although it has been suggested that the co-expression of multiple pathological proteins associated with neurodegeneration may act synergistically to induce more widespread neuropathology, experimental evidence of this is sparse. We have previously shown that the expression of Thr175Asp-tau (tauT175D) using somatic gene transfer with a stereotaxically-injected recombinant adeno-associated virus (rAAV9) vector induces tau pathology in rat hippocampus. In this study, we have examined whether the co-expression of human tauT175D with mutant human TDP-43 (TDP-43M337V) will act synergistically. Transgenic female Sprague-Dawley rats that inducibly express mutant human TDP-43M337V using the choline acetyltransferase (ChAT) tetracycline response element (TRE) driver with activity modulating tetracycline-controlled transactivator (tTA) were utilized in these studies. Adult rats were injected with GFP-tagged tau protein constructs in a rAAV9 vector through bilateral stereotaxic injection into the hippocampus. Injected tau constructs were: wild-type GFP-tagged 2N4R human tau (tauWT; n = 8), GFP-tagged tauT175D 2N4R human tau (tauT175D, pseudophosphorylated, toxic variant, n = 8), and GFP (control, n = 8). Six months post-injection, mutant TDP-43M337V expression was induced for 30 days. Behaviour testing identified motor deficits within 3 weeks after TDP-43 expression irrespective of tau expression, though social behaviour and sensorimotor gating remained unchanged. Increased tau pathology was observed in the hippocampus of both tauWT and tauT175D expressing rats and tauT175D pathology was increased in the presence of cholinergic neuronal expression of human TDP-43M337V. These data indicate that co-expression of pathological TDP-43 and tau protein exacerbate the pathology associated with either individual protein.


Subject(s)
DNA-Binding Proteins/metabolism , Hippocampus/metabolism , Hippocampus/physiology , Neurodegenerative Diseases/metabolism , Neurodegenerative Diseases/pathology , tau Proteins/metabolism , Animals , Behavior, Animal , DNA-Binding Proteins/toxicity , Disease Models, Animal , Female , Gene Transfer Techniques , Humans , Motor Activity , Rats, Sprague-Dawley , Rats, Transgenic , Spinal Cord/metabolism , Spinal Cord/pathology , tau Proteins/toxicity
7.
Cell Rep ; 28(8): 2080-2095.e6, 2019 08 20.
Article in English | MEDLINE | ID: mdl-31433984

ABSTRACT

Hsp104 is an AAA+ protein disaggregase, which can be potentiated via diverse mutations in its autoregulatory middle domain (MD) to mitigate toxic misfolding of TDP-43, FUS, and α-synuclein implicated in fatal neurodegenerative disorders. Problematically, potentiated MD variants can exhibit off-target toxicity. Here, we mine disaggregase sequence space to safely enhance Hsp104 activity via single mutations in nucleotide-binding domain 1 (NBD1) or NBD2. Like MD variants, NBD variants counter TDP-43, FUS, and α-synuclein toxicity and exhibit elevated ATPase and disaggregase activity. Unlike MD variants, non-toxic NBD1 and NBD2 variants emerge that rescue TDP-43, FUS, and α-synuclein toxicity. Potentiating substitutions alter NBD1 residues that contact ATP, ATP-binding residues, or the MD. Mutating the NBD2 protomer interface can also safely ameliorate Hsp104. Thus, we disambiguate allosteric regulation of Hsp104 by several tunable structural contacts, which can be engineered to spawn enhanced therapeutic disaggregases with minimal off-target toxicity.


Subject(s)
DNA-Binding Proteins/toxicity , Heat-Shock Proteins/metabolism , RNA-Binding Protein FUS/toxicity , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/metabolism , alpha-Synuclein/toxicity , Adenosine Triphosphate/metabolism , Amino Acid Sequence , Azetidinecarboxylic Acid/pharmacology , Heat-Shock Proteins/chemistry , Heat-Shock Proteins/genetics , Mutant Proteins/metabolism , Mutation, Missense/genetics , Protein Aggregates , Protein Domains , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/genetics , Temperature
8.
Brain ; 142(5): 1176-1194, 2019 05 01.
Article in English | MEDLINE | ID: mdl-30938443

ABSTRACT

Transactive response DNA-binding protein-43 (TDP-43) is an RNA/DNA binding protein that forms phosphorylated and ubiquitinated aggregates in the cytoplasm of motor neurons in amyotrophic lateral sclerosis, which is a hallmark of this disease. Amyotrophic lateral sclerosis is a neurodegenerative condition affecting the upper and lower motor neurons. Even though the aggregative property of TDP-43 is considered a cornerstone of amyotrophic lateral sclerosis, there has been major controversy regarding the functional link between TDP-43 aggregates and cell death. In this review, we attempt to reconcile the current literature surrounding this debate by discussing the results and limitations of the published data relating TDP-43 aggregates to cytotoxicity, as well as therapeutic perspectives of TDP-43 aggregate clearance. We point out key data suggesting that the formation of TDP-43 aggregates and the capacity to self-template and propagate among cells as a 'prion-like' protein, another pathological property of TDP-43 aggregates, are a significant cause of motor neuronal death. We discuss the disparities among the various studies, particularly with respect to the type of models and the different forms of TDP-43 used to evaluate cellular toxicity. We also examine how these disparities can interfere with the interpretation of the results pertaining to a direct toxic effect of TDP-43 aggregates. Furthermore, we present perspectives for improving models in order to better uncover the toxic role of aggregated TDP-43. Finally, we review the recent studies on the enhancement of the cellular clearance mechanisms of autophagy, the ubiquitin proteasome system, and endocytosis in an attempt to counteract TDP-43 aggregation-induced toxicity. Altogether, the data available so far encourage us to suggest that the cytoplasmic aggregation of TDP-43 is key for the neurodegeneration observed in motor neurons in patients with amyotrophic lateral sclerosis. The corresponding findings provide novel avenues toward early therapeutic interventions and clinical outcomes for amyotrophic lateral sclerosis management.


Subject(s)
Amyotrophic Lateral Sclerosis/metabolism , Amyotrophic Lateral Sclerosis/pathology , Autophagy/physiology , DNA-Binding Proteins/metabolism , DNA-Binding Proteins/toxicity , Protein Aggregates/physiology , Animals , Cell Death/physiology , Cytoplasm/metabolism , Cytoplasm/pathology , Humans
9.
Biochem Biophys Res Commun ; 513(4): 925-932, 2019 06 11.
Article in English | MEDLINE | ID: mdl-31005259

ABSTRACT

The most prominent hallmarks of many neurodegenerative diseases are the accumulation of misfolded protein aggregates and the death of certain neuronal populations. Autophagy is the major intracellular mechanism that degrades protein aggregates and damaged cellular components. Many studies have reported that the dysfunction of autophagy is associated with several neurodegenerative diseases, such as Alzheimer's disease, amyotrophic lateral sclerosis (ALS), and Parkinson's disease. Here, we identified a novel mechanism of autophagy regulation. Inhibition of MEK5 reduced the level of p62 and increased the ratio of LC3-II to LC3-I, which is a marker for the activation of the autophagy-lysosome pathway (ALP). One of the most well-known regulators of the ALP is mTOR, and previous studies have reported that the major substrate of MEK5 is ERK5. However, we found that MEK5 modulates the autophagy-lysosome pathway in an mTOR- and ERK5-independent manner. Moreover, MEK5 inhibition alleviated the mislocalization of TDP-43 (an ALS-associated protein) and cell death in TDP-43-GFP-expressing neuronal cells. Taken together, these findings suggest that MEK5 is a novel autophagy modulator and that this kinase could be a therapeutic target for neurodegenerative diseases such as amyotrophic lateral sclerosis.


Subject(s)
Autophagy , DNA-Binding Proteins/toxicity , Lysosomes/metabolism , MAP Kinase Kinase 5/antagonists & inhibitors , Metabolic Networks and Pathways/physiology , Neurons/cytology , Animals , Humans , Microtubule-Associated Proteins/metabolism , Neurons/metabolism , RNA-Binding Proteins/metabolism , TOR Serine-Threonine Kinases/physiology
10.
Neurochem Res ; 43(12): 2304-2312, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30317421

ABSTRACT

Amyotrophic lateral sclerosis (ALS) is a rapidly progressive motor neuron disease for which only limited effective therapeutics are available. Currently, TAR DNA-binding protein 43 (TDP-43) is recognized as a pathological and biochemical marker for ALS. Increases in the levels of aggregated or mislocalized forms of TDP-43 might result in ALS pathology. Therefore, clearance pathways for intracellular protein aggregates have been suggested as potential therapeutic targets for the treatment of ALS. Here we report that treatment of motor neuron-like NSC34 cells overexpressing TDP-43 with diallyl trisulfide (DATS) induced neuronal autophagy and lysosomal clearance of TDP-43 and C-terminal TDP-43 fragments. We also observed that the antioxidant transcription factor NF-E2-related factor 2 (Nrf2) was accumulated in the nucleus and the expression of the antioxidant enzymes heme oxygenase1 (HO-1) and NAD(P)H:quinone oxidoreductase (NQO1) was increased. Consequently, DATS suppressed the increase in the levels of reactive oxygen species induced by TDP-43 expression. This study extends the findings of prior reports indicating that lower doses of DATS mediate cell survival in part by inducing autophagy and activating the Nrf2/antioxidant response element pathway.


Subject(s)
Allyl Compounds/pharmacology , Antioxidants/pharmacology , DNA-Binding Proteins/biosynthesis , Lysosomes/metabolism , Motor Neurons/metabolism , Neuroprotective Agents/pharmacology , Sulfides/pharmacology , Antioxidant Response Elements/drug effects , Antioxidant Response Elements/physiology , Cell Line , Cell Survival/drug effects , Cell Survival/physiology , DNA-Binding Proteins/toxicity , Dose-Response Relationship, Drug , Humans , Lysosomes/drug effects , Lysosomes/pathology , Motor Neurons/drug effects , Motor Neurons/pathology , Reactive Oxygen Species/antagonists & inhibitors , Reactive Oxygen Species/metabolism
11.
Nat Commun ; 9(1): 4406, 2018 10 23.
Article in English | MEDLINE | ID: mdl-30353006

ABSTRACT

TDP-43 is the major disease protein associated with amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration with ubiquitinated inclusions (FTLD-TDP). Here we identify the transcriptional elongation factor Ell-a shared component of little elongation complex (LEC) and super elongation complex (SEC)-as a strong modifier of TDP-43-mediated neurodegeneration. Our data indicate select targets of LEC and SEC become upregulated in the fly ALS/FTLD-TDP model. Among them, U12 snRNA and a stress-induced long non-coding RNA Hsrω, functionally contribute to TDP-43-mediated degeneration. We extend the findings of Hsrω, which we identify as a chromosomal target of TDP-43, to show that the human orthologue Sat III is elevated in a human cellular disease model and FTLD-TDP patient tissue. We further demonstrate an interaction between TDP-43 and human ELL2 by co-immunoprecipitation from human cells. These findings reveal important roles of Ell-complexes LEC and SEC in TDP-43-associated toxicity, providing potential therapeutic insight for TDP-43-associated neurodegeneration.


Subject(s)
DNA-Binding Proteins/toxicity , RNA, Untranslated/genetics , Transcription Elongation, Genetic , Animals , Drosophila Proteins/metabolism , Drosophila melanogaster/metabolism , Female , Genetic Loci , HEK293 Cells , Humans , Male , Models, Biological , Nuclear Proteins/metabolism , Polytene Chromosomes/metabolism , Protein Binding , RNA, Small Nuclear/genetics , Transcription Factors/metabolism , Transcriptional Elongation Factors/metabolism
12.
PLoS One ; 13(5): e0196528, 2018.
Article in English | MEDLINE | ID: mdl-29787572

ABSTRACT

TDP-43-mediated proteinopathy is a key factor in the pathology of amyotrophic lateral sclerosis (ALS). A potential underlying mechanism is dysregulation of the cytoskeleton. Here we investigate the effects of expressing TDP-43 wild-type and M337V and Q331K mutant isoforms on cytoskeletal integrity and function, using rat cortical neurons in vitro. We find that TDP-43 protein becomes mislocalised in axons over 24-72 hours in culture, with protein aggregation occurring at later timepoints (144 hours). Quantitation of cell viability showed toxicity of both wild-type and mutant constructs which increased over time, especially of the Q331K mutant isoform. Analysis of the effects of TDP-43 on axonal integrity showed that TDP-43-transfected neurons had shorter axons than control cells, and that growth cone sizes were smaller. Axonal transport dynamics were also impaired by transfection with TDP-43 constructs. Taken together these data show that TDP-43 mislocalisation into axons precedes cell death in cortical neurons, and that cytoskeletal structure and function is impaired by expression of either TDP-43 wild-type or mutant constructs in vitro. These data suggest that dysregulation of cytoskeletal and neuronal integrity is an important mechanism for TDP-43-mediated proteinopathy.


Subject(s)
DNA-Binding Proteins/metabolism , Motor Neurons/metabolism , TDP-43 Proteinopathies/etiology , Amyotrophic Lateral Sclerosis/etiology , Amyotrophic Lateral Sclerosis/genetics , Amyotrophic Lateral Sclerosis/metabolism , Animals , Axonal Transport/drug effects , Axonal Transport/physiology , Axons/metabolism , Axons/pathology , Cell Death , Cells, Cultured , DNA-Binding Proteins/genetics , DNA-Binding Proteins/toxicity , Growth Cones/metabolism , Growth Cones/pathology , Humans , Motor Neurons/drug effects , Motor Neurons/pathology , Mutant Proteins/genetics , Mutant Proteins/metabolism , Mutant Proteins/toxicity , Neurotoxins/genetics , Neurotoxins/metabolism , Neurotoxins/toxicity , Protein Aggregation, Pathological/etiology , Protein Aggregation, Pathological/genetics , Protein Aggregation, Pathological/metabolism , Rats , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Recombinant Fusion Proteins/toxicity , TDP-43 Proteinopathies/genetics , TDP-43 Proteinopathies/metabolism , Transfection
13.
J Neurosci ; 38(27): 6045-6062, 2018 07 04.
Article in English | MEDLINE | ID: mdl-29807909

ABSTRACT

Frontotemporal lobar degeneration (FTLD) is among the most prevalent dementias of early-onset. Pathologically, FTLD presents with tauopathy or TAR DNA-binding protein 43 (TDP-43) proteinopathy. A biallelic mouse model of FTLD was produced on a mix FVB/129SVE background overexpressing wild-type human TDP-43 (hTDP-43) using tetracycline transactivator (tTA), a system widely used in mouse models of neurological disorders. tTA activates hTDP-43, which is placed downstream of the tetracycline response element. The original study on this transgenic mouse found hippocampal degeneration following hTDP-43 expression, but did not account for independent effects of tTA protein. Here, we initially analyzed the neurotoxic effects of tTA in postweaning age mice of either sex using immunostaining and area measurements of select brain regions. We observed tTA-dependent toxicity selectively in the hippocampus affecting the dentate gyrus significantly more than CA fields, whereas hTDP-43-dependent toxicity in bigenic mice occurred in most other cortical regions. Atrophy was associated with inflammation, activation of caspase-3, and loss of neurons. The atrophy associated with tTA expression was rescuable by the tetracycline analog, doxycycline, in the diet. MRI studies corroborated the patterns of atrophy. tTA-induced degeneration was strain-dependent and was rescued by moving the transgene onto a congenic C57BL/6 background. Despite significant hippocampal atrophy, behavioral tests in bigenic mice revealed no hippocampally mediated memory impairment. Significant atrophy in most cortical areas due solely to TDP-43 expression indicates that this mouse model remains useful for providing critical insight into co-occurrence of TDP-43 pathology, neurodegeneration, and behavioral deficits in FTLD.SIGNIFICANCE STATEMENT The tTA expression system has been widely used in mice to model neurological disorders. The technique allows investigators to reversibly turn on or off disease causing genes. Here, we report on a mouse model that overexpresses human TDP-43 using tTA and attempt to recapitulate features of TDP-43 pathology present in human FTLD. The tTA expression system is problematic, resulting in dramatic degeneration of the hippocampus. Thus, our study adds a note of caution for the use of the tTA system. However, because FTLD is primarily characterized by cortical degeneration and our mouse model shows significant atrophy in most cortical areas due to human TDP-43 overexpression, our animal model remains useful for providing critical insight on this human disease.


Subject(s)
DNA-Binding Proteins/toxicity , Disease Models, Animal , Frontotemporal Lobar Degeneration , Trans-Activators/toxicity , Animals , DNA-Binding Proteins/genetics , Humans , Mice , Mice, Inbred C57BL , Mice, Transgenic
14.
ACS Infect Dis ; 3(12): 917-926, 2017 12 08.
Article in English | MEDLINE | ID: mdl-28960954

ABSTRACT

Tachyplesin-1 (TP1; 1) is a cationic ß-hairpin antimicrobial peptide with a membranolytic mechanism of action. While it possesses broad-spectrum, potent antimicrobial activity, 1 is highly hemolytic against mammalian erythrocytes, which precludes it from further development. In this study, we report a template-based approach to investigate the structure-function and structure-toxicity relationships of each amino acid of 1. We modulated charge and hydrophobicity by residue modification and truncation of the peptide. Antimicrobial activity was then assessed against six key bacterial pathogens and two fungi, with toxicity profiled against mammalian cells. The internal disulfide bridge Cys7-Cys12 of 1 was shown to play an important role in broad-spectrum antimicrobial activity against all pathogenic strains tested. Novel peptides based on the progenitor were then designed, including 5 (TP1[F4A]), 12 (TP1[I11A]), and 19 (TP1[C3A,C16A]). These had 26- to 64-fold improved activity/toxicity indices and show promise for further development. Structural studies of 5 (TP1[F4A]) and 12 (TP1[I11A]) identified a conserved ß-hairpin secondary structure motif correlating with their very high stablility in mouse and human plasma. Membrane binding affinity determined by surface plasmon resonance confirmed their selectivity toward bacterial membranes, but the degree of membrane binding did not correlate with the degree of hemolysis, suggesting that other factors may drive toxicity.


Subject(s)
Anti-Infective Agents/pharmacology , Antimicrobial Cationic Peptides/pharmacology , DNA-Binding Proteins/pharmacology , Peptides, Cyclic/pharmacology , Animals , Antimicrobial Cationic Peptides/chemistry , Antimicrobial Cationic Peptides/toxicity , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/toxicity , HEK293 Cells , Humans , Mice , Microbial Sensitivity Tests , Peptides, Cyclic/chemistry , Peptides, Cyclic/toxicity , Protein Stability , Protein Structure, Secondary , Structure-Activity Relationship , Surface Plasmon Resonance
15.
Bull Exp Biol Med ; 162(6): 754-757, 2017 Apr.
Article in English | MEDLINE | ID: mdl-28429216

ABSTRACT

We analyze the effects of N-terminal acetylation and C-terminal amidation on the cytotoxic properties of ß-hairpin antimicrobial peptide tachyplesin I. MTT-assay showed that modified tachyplesin I exhibited increased cytotoxicity toward both tumor and normal human cells. Hemolytic activity of modified tachyplesin I was also higher than that of the initial molecule. In contrast to non-modified tachyplesin I, the peptide with C- and N-terminal modifications is resistant to proteolytic degradation in fresh human serum. C- and N-terminal modifications make tachyplesin I more attractive prototype of anticancer drug due to its more potent cytotoxic effect and better pharmacokinetic properties.


Subject(s)
Antimicrobial Cationic Peptides/toxicity , Cytotoxins/toxicity , DNA-Binding Proteins/toxicity , Peptides, Cyclic/toxicity , Recombinant Proteins/toxicity , Solid-Phase Synthesis Techniques/methods , A549 Cells , Acetylation , Amides/chemistry , Amino Acid Sequence , Antimicrobial Cationic Peptides/chemical synthesis , Cell Survival/drug effects , Cytotoxins/chemical synthesis , DNA-Binding Proteins/chemical synthesis , Erythrocytes/drug effects , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , HEK293 Cells , HeLa Cells , Hemolysis/drug effects , Humans , Inhibitory Concentration 50 , Peptides, Cyclic/chemical synthesis , Protein Stability , Proteolysis , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Structure-Activity Relationship
16.
J Mol Microbiol Biotechnol ; 26(4): 277-83, 2016.
Article in English | MEDLINE | ID: mdl-27245477

ABSTRACT

BACKGROUND/AIMS: The Escherichia coli MazF is an endoribonuclease that cleaves mRNA at ACA sequences, thereby triggering inhibition of protein synthesis. The aim of this study is to evaluate the efficiency of the mazEF toxin-antitoxin system in plants to develop biotechnological tools for targeted cell ablation. METHODS: A double transformation strategy, combining expression of the mazE antitoxin gene under the control of the CaMV 35S promoter, reported to drive expression in all plant cells except within the tapetum, together with the expression of the mazF gene under the control of the TA29 tapetum-specific promoter in transgenic tobacco, was applied. RESULTS: No transgenic TA29-mazF line could be regenerated, suggesting that the TA29 promoter is not strictly tapetum specific and that MazF is toxic for plant cells. The regenerated 35S-mazE/TA29-mazF double-transformed lines gave a unique phenotype where the tapetal cell layer was necrosed resulting in the absence of pollen. CONCLUSION: These results show that the E. colimazEF system can be used to induce death of specific plant cell types and can provide a new tool to plant cell ablation.


Subject(s)
DNA-Binding Proteins/metabolism , DNA-Binding Proteins/toxicity , Endoribonucleases/toxicity , Escherichia coli Proteins/metabolism , Escherichia coli Proteins/toxicity , Nicotiana/metabolism , Plants, Genetically Modified/metabolism , Cell Death , DNA-Binding Proteins/genetics , Endoribonucleases/genetics , Escherichia coli Proteins/genetics , Gene Expression , Plants, Genetically Modified/genetics , Promoter Regions, Genetic , Nicotiana/genetics , Transformation, Genetic
17.
J Agric Food Chem ; 64(17): 3338-44, 2016 May 04.
Article in English | MEDLINE | ID: mdl-27071850

ABSTRACT

Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease causing death of the motor neurons. Proteotoxicity caused by TDP-43 protein is an important aspect of ALS pathogenesis, with TDP-43 being the main constituent of the aggregates found in patients. We have previously tested the effect of different sugars on the proteotoxicity caused by the expression of mutant TDP-43 in Caenorhabditis elegans. Here we tested maple syrup, a natural compound containing many active molecules including sugars and phenols, for neuroprotective activity. Maple syrup decreased several age-dependent phenotypes caused by the expression of TDP-43(A315T) in C. elegans motor neurons and requires the FOXO transcription factor DAF-16 to be effective.


Subject(s)
Acer/chemistry , Amyotrophic Lateral Sclerosis/prevention & control , Caenorhabditis elegans , DNA-Binding Proteins/toxicity , Disease Models, Animal , Plant Extracts/pharmacology , Amyotrophic Lateral Sclerosis/metabolism , Animals , Animals, Genetically Modified , Gas Chromatography-Mass Spectrometry
18.
J Neurosci Res ; 94(7): 671-82, 2016 07.
Article in English | MEDLINE | ID: mdl-26994698

ABSTRACT

TAR DNA binding protein 43 (TDP-43) is a nuclear protein that has been shown to have altered homeostasis in the form of neuronal nuclear and cytoplasmic aggregates in some familial and almost all cases of sporadic amyotrophic lateral sclerosis as well as 51% of frontotemporal lobar degeneration and 57% of Alzheimer's disease cases. Heat shock proteins (HSPs), such as HSP70, recognize misfolded or aggregated proteins and refold, disaggregate, or turn them over and are upregulated by the master transcription factor heat shock factor 1 (HSF1). Here, we explore the effect of HSF1 overexpression on proteotoxic stress-related alterations in TDP-43 solubility, proteolytic processing, and cytotoxicity. HSF1 overexpression reduced TDP-43-positive puncta concomitantly with upregulating HSP70 and HSP90 protein levels. HSF1 overexpression or pharmacological activation sustained TDP-43 solubility and significantly reduced truncation of TDP-43 in response to inhibition of the proteasome with Z-Leu-Leu-Leu-al, and this was reversed by HSF1 inhibition. HSF1 activation conferred protection against toxicity associated with TDP-43 C-terminal fragments without globally increasing the activity of the ubiquitin proteasome system (UPS) while concomitantly reducing the induction of autophagy, suggesting that HSF1 protection is an early event. In support of this, inhibition of HSP70 ATPase activity further reduced TDP-43 solubility. HSF1 knockout significantly increased TDP-43 insolubility and accelerated TDP-43 fragmentation in response to proteotoxic stress. Overall, this study shows that HSF1 overexpression protects against TDP-43 pathology by upregulation of chaperones, especially HSP70, rather than enhancing autophagy or the UPS during times of proteotoxic stress. © 2016 Wiley Periodicals, Inc.


Subject(s)
DNA-Binding Proteins/chemistry , HSP70 Heat-Shock Proteins/biosynthesis , Heat Shock Transcription Factors/genetics , Alzheimer Disease/genetics , Alzheimer Disease/metabolism , Amyotrophic Lateral Sclerosis/genetics , Amyotrophic Lateral Sclerosis/metabolism , Animals , Autophagy/genetics , Cell Line, Tumor , Cells, Cultured , DNA-Binding Proteins/toxicity , Heat Shock Transcription Factors/biosynthesis , Humans , Mice , Mice, Knockout , Primary Cell Culture , Proteasome Endopeptidase Complex/drug effects , Solubility , Ubiquitin/metabolism
19.
Brain Res ; 1629: 171-81, 2015 Dec 10.
Article in English | MEDLINE | ID: mdl-26498879

ABSTRACT

The anorectic neuropeptide nesfatin-1 has recently been characterized as a potential mood regulator, but the accurate effect of nesfatin-1 on anxiety and learning and memory behavior and the possible mechanisms remains unknown. In the present study, to test the hypothesis that nesfatin-1 might affect the anxiety-like and learning and memory behaviors in rats via ERK/CREB/BDNF pathway, nesfatin-1 was administered intraperitoneally to rats with the doses (10, 20, 40µg/kg), and the behavioral performance was tested using the open field task, the Morris water maze (MWM), and the Y maze. Moreover, the protein expression of brain-derived neurotrophic factor (BDNF), total and phosphorylated-ERK in the hippocampus and the prefrontal cortex (PFC) were evaluated. The results showed that chronic administration of nesfatin-1 could decrease the moving distance, the duration in the center, and the frequencies of rearing and grooming in the open field task, decrease the moving distance, frequency, and the preference index of new arm in the Y maze, although there was no significant difference of the performance in the MWM task among groups. Furthermore, 3 weeks' consecutive administration of nesfatin-1 resulted in the decrease of protein expression of BDNF and phosphorylated-ERK in the hippocampus and the PFC. These results provided evidence that exogenous nesfatin-1 could decrease exploration and induce anxiety-like behavior in rats, the mechanism of which might be related to the reduced protein expression of BDNF and phosphorylated-ERK in the hippocampus and the PFC.


Subject(s)
Anxiety/chemically induced , Appetite Depressants/toxicity , Calcium-Binding Proteins/toxicity , DNA-Binding Proteins/toxicity , Exploratory Behavior/drug effects , Maze Learning/drug effects , Memory Disorders/chemically induced , Nerve Tissue Proteins/toxicity , Animals , Anxiety/psychology , Dose-Response Relationship, Drug , Exploratory Behavior/physiology , Male , Maze Learning/physiology , Memory Disorders/psychology , Nucleobindins , Rats , Rats, Sprague-Dawley
20.
Mutat Res ; 781: 37-48, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26421495

ABSTRACT

Tyrosyl-DNA-phosphodiesterase 1 (TDP1) is a DNA repair enzyme that removes irreversible protein-linked 3' DNA complexes, 3' phosphoglycolates, alkylation damage-induced DNA breaks, and 3' deoxyribose nucleosides. In addition to its extended spectrum of substrates, TDP1 interacts with several DNA damage response factors. To determine whether TDP1 participates in the repair of topoisomerase II (Top2) induced DNA lesions, we generated TDP1 depleted (TDP1kd) human tumoral cells. We found that TDP1kd cells are hypersensitive to etoposide (ETO). Moreover, we established in a chromatin context that following treatment with ETO, TDP1kd cells accumulate increased amounts of Top2α cleavage complexes, removing them with an altered kinetics. We also showed that TDP1 depleted cells accumulate increased γH2AX and pS296Chk1 signals following treatment with ETO. Similarly, cytogenetics analyses following Top2 poisoning revealed increased amounts of chromatid and chromosome breaks and exchanges on TDP1kd cells in the presence or not of the DNA-PKcs inhibitor NU7026. However, the levels of sister chromatid exchanges were similar in both TDP1kd and control non-silenced cell lines. This suggests a role of TDP1 in both canonical non-homologous end joining and alternative end joining, but not in the homologous recombination repair pathway. Finally, micronucleus analyses following ETO treatment revealed a higher frequency of micronucleus containing γH2AX signals on TDP1kd cells. Together, our results highlight an active role of TDP1 in the repair of Top2-induced DNA damage and its relevance on the genome stability maintenance in human cells.


Subject(s)
Antigens, Neoplasm/toxicity , DNA Damage/genetics , DNA End-Joining Repair/genetics , DNA Topoisomerases, Type II/toxicity , DNA-Binding Proteins/toxicity , Phosphoric Diester Hydrolases/metabolism , Chromones , Colony-Forming Units Assay , DNA End-Joining Repair/physiology , DNA Primers/genetics , Etoposide/pharmacology , Flow Cytometry , Fluorescent Antibody Technique , Gentian Violet , HeLa Cells , Histones/metabolism , Humans , Immunoblotting , Micronucleus Tests , Morpholines , Phosphoric Diester Hydrolases/deficiency , Phosphoric Diester Hydrolases/genetics , Poly-ADP-Ribose Binding Proteins , Real-Time Polymerase Chain Reaction
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