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1.
Plant J ; 108(4): 1116-1130, 2021 11.
Article in English | MEDLINE | ID: mdl-34547154

ABSTRACT

Carotenoids are important natural pigments that give bright colors to plants. The difference in the accumulation of carotenoids is one of the key factors in the formation of various colors in carrot taproots. Carotenoid cleavage dioxygenases (CCDs), including CCD and 9-cis epoxycarotenoid dioxygenase, are the main enzymes involved in the cleavage of carotenoids in plants. Seven CCD genes have been annotated from the carrot genome. In this study, through expression analysis, we found that the expression level of DcCCD4 was significantly higher in the taproot of white carrot (low carotenoid content) than orange carrot (high carotenoid content). The overexpression of DcCCD4 in orange carrots caused the taproot color to be pale yellow, and the contents of α- and ß-carotene decreased sharply. Mutant carrot with loss of DcCCD4 function exhibited yellow color (the taproot of the control carrot was white). The accumulation of ß-carotene was also detected in taproot. Functional analysis of the DcCCD4 enzyme in vitro showed that it was able to cleave α- and ß-carotene at the 9, 10 (9', 10') double bonds. In addition, the number of colored chromoplasts in the taproot cells of transgenic carrots overexpressing DcCCD4 was significantly reduced compared with that in normal orange carrots. Results showed that DcCCD4 affects the accumulation of carotenoids through cleavage of α- and ß-carotene in carrot taproot.


Subject(s)
Carotenoids/metabolism , Daucus carota/enzymology , Dioxygenases/metabolism , Plant Proteins/metabolism , Daucus carota/genetics , Dioxygenases/genetics , Gene Expression , Plant Proteins/genetics , Plant Roots/enzymology , Plant Roots/genetics , Plastids/metabolism , beta Carotene/metabolism
2.
Plant Physiol Biochem ; 167: 245-256, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34385003

ABSTRACT

Plant class III peroxidases (CIII Prxs) are involved in numerous essential plant life processes, such as plant development and differentiation, lignification and seed germination, and defence against pathogens. However, there is limited information about the structure-function relationships of Prxs in carrots. This study identified 75 carrot peroxidases (DcPrxs) and classified them into seven subgroups based on phylogenetic analysis. Gene structure analysis revealed that these DcPrxs had between one and eight introns, while conserved motif analysis showed a typical motif composition and arrangement for CIII Prx. In addition, eighteen tandem duplication events, but only eight segmental duplications, were identified among these DcPrxs, indicating that tandem duplication was the main contributor to the expansion of this gene family. Histochemical analyses showed that lignin was mainly localised in the cell walls of xylem, and Prx activity was determined in the epidermal region of taproots. The xylem always showed higher lignin concentration and lower Prx activity compared to the phloem in the taproots of both carrot cultivars. Combining these observations with RNA sequencing, some Prx genes were identified as candidate genes related to lignification and pigmentation. Three peroxidases (DcPrx30, DcPrx32, DcPrx62) were upregulated in the phloem of both genotypes. Carrot taproots are an attractive resource for natural food colourants and this study elucidated genome-wide insights of Prx for the first time, developing hypotheses concerning their involvement with lignin and anthocyanin in purple carrots. The findings provide an essential foundation for further studies of Prx genes in carrot, especially on pigmentation and lignification mechanisms.


Subject(s)
Anthocyanins/metabolism , Daucus carota , Lignin , Peroxidase , Daucus carota/enzymology , Daucus carota/genetics , Gene Expression Profiling , Gene Expression Regulation, Plant , Lignin/metabolism , Multigene Family , Peroxidase/genetics , Peroxidase/metabolism , Phylogeny , Plant Proteins/genetics , Plant Proteins/metabolism
3.
Food Chem ; 343: 128524, 2021 May 01.
Article in English | MEDLINE | ID: mdl-33199114

ABSTRACT

The effects of ultrasonication (US) and thermosonication (TS) blanching at varying frequencies on the carrot peroxidase (POD) inactivation and potential mechanisms were studied. The physicochemical properties were evaluated. Hot water (HW) blanching was used as control. Thermosonication decreased the POD activity to a greater extent, with a dual-frequency of 22/40 kHz showing the most significant effect. The POD-related gene expression was down-regulated by TS, which was contrary to the thermally treated samples. Electron paramagnetic resonance (EPR) spectra revealed that ultrasound-induced radicals from water sonolysis might involve in the POD inactivation. Thermosonication substantially increased the total carotenoid content (TCC). The color analysis showed that thermosonicated samples with a dual-frequency (22/40 kHz) exhibited the maximum values of C* and ΔE, and the minimum value of the whiteness index (WI). The micrographs verified the alterations in TCC and relative electrolyte leakage (REL) of carrot treated by HW, US, and TS.


Subject(s)
Daucus carota/chemistry , Food Preservation/methods , Peroxidase/chemistry , Plant Proteins/chemistry , Carotenoids/analysis , Color , Daucus carota/enzymology , Daucus carota/genetics , Daucus carota/metabolism , Electrolytes/chemistry , Electron Spin Resonance Spectroscopy , Food Quality , Hot Temperature , Peroxidase/genetics , Peroxidase/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Ultrasonics/methods , Water/chemistry
4.
Food Chem ; 307: 125549, 2020 Mar 01.
Article in English | MEDLINE | ID: mdl-31648175

ABSTRACT

The aim of this study was to determine the influence of static and multi-pulsed hydrostatic pressure processing (HPP) treatments on the polyphenolic profile, oxidoreductase activity, colour, and browning index of carrot juice. Phenolic acids, flavonoids, lignans and other polyphenols were the predominant polyphenols detected with Triple-TOF-LC-MS/MS. The highest concentration of ferulic acid, didymin, dihydro-p-coumaric acid, sesaminol and matairesinol isomers were found among all the compounds detected. After HPP treatment, irrespective of the pressures applied, new simple polyphenols like oleuropein, 4-vinylsyringol, isocoumarin, and 4-hydroxybenzaldehyde were detected. Both phenomena could be attributed to the release of bounded phenolic compounds after applying HPP, as well as enzymatic degradation and/or condensation. The highest inactivation of polyphenoloxidase (PPO) enzymes (57%) was obtained at 300 MPa × 3 pulses, and peroxidase (POD) enzymes (31%) at 600 MPa working in static mode. Significant changes in the colour parameters and browning index were observed in all HPP-treated juices.


Subject(s)
Catechol Oxidase/metabolism , Daucus carota/chemistry , Polyphenols/analysis , Blood Pressure , Chromatography, Liquid , Color , Daucus carota/enzymology , Tandem Mass Spectrometry
5.
Food Sci Technol Int ; 25(5): 394-403, 2019 Jul.
Article in English | MEDLINE | ID: mdl-30696272

ABSTRACT

The effect of high-power ultrasound treatment on enzymes' activity, physicochemical attributes (total soluble solids, pH, viscosity, turbidity, particle size distribution and colour) and carotenoids' content of carrot juice was investigated. The treatments were carried out at 20 kHz (0.95, 2.38, 3.80 W/ml power) in an ice bath for 2, 4, 6, 8, 10 min. The polyphenol oxidase and pectin methylesterase activity were decreased by 43.90 and 37.95% at 3.80 W/ml power and 10 min exposure time, respectively. With the increase of power and time, the effect of high-power ultrasound on the inactivation of enzymes was getting stronger. However, high-power ultrasound had no inactivation effect on peroxidase activity under all treatment conditions. The visual colour differences were not obvious after high-power ultrasound. The pH, total soluble solids and particle size distribution of carrot juice were not significantly affected (p > 0.05) under all treatment conditions, while turbidity was increased and carotenoids' content was decreased. The viscosity of carrot juice was decreased by 1.27% at 0.95 W/ml power and 8 min, while it was increased by 2.29% at 2.38 W/ml power and 8 min. The value of viscosity was negatively correlated with the activity of pectin methylesterase (Pearson's r = -0.481, p < 0.05). According to these results, we could conclude that the optimal treatment condition was 3.80 W/ml for 10 min. Overall, high-power ultrasound treatment inhibited browning, maintained taste and nutritional value and improved stability of carrot juice. Therefore, this technology could well be an option for processing of carrot juice and laid the theoretical foundation for the production of carrot juice and carrot compound beverage.


Subject(s)
Daucus carota/chemistry , Food Irradiation/adverse effects , Fruit and Vegetable Juices/analysis , Nutritive Value , Ultrasonic Waves/adverse effects , Carboxylic Ester Hydrolases/metabolism , Carotenoids/analysis , Catechol Oxidase/metabolism , Chemical Phenomena , Daucus carota/enzymology , Daucus carota/radiation effects , Food Handling/methods , Fruit and Vegetable Juices/radiation effects , Viscosity
6.
Phytochemistry ; 159: 179-189, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30634080

ABSTRACT

Carrot (Daucus carota subsp. sativus) is a widely cultivated root vegetable of high economic importance. The aroma of carrot roots and aboveground organs is mainly defined by terpenes. We found that leaves of orange carrot cultivar also produce considerable amounts of the phenylpropenes methyleugenol and methylisoeugenol. Notably, methyleugenol is most abundant in young leaves, while methylisoeugenol is the dominant phenylpropene in mature leaf tissue. The goal of the present study was to shed light on the biochemistry and molecular biology of these compounds' biosynthesis and accumulation. Using the available genomic and transcriptomic data, we isolated a cDNA encoding eugenol/isoeugenol synthase (DcE(I)GS1), an NADPH-dependent enzyme that converts coniferyl acetate to eugenol. This enzyme exhibits dual product specificity and yields propenylphenol isoeugenol alongside allylphenol eugenol. Furthermore, we identified a cDNA encoding S-adenosyl-L-methionine:eugenol/isoeugenol O-methyltransferase 1 (DcE(I)OMT1) that produces methyleugenol and methylisoeugenol via methylation of the para-OH-group of their respective precursors. Both DcE(I)GS1 and DcE(I)OMT1 were expressed in seeds, roots, young and mature leaves, and the DcE(I)OMT1 transcript levels were the highest in leaves. The DcE(I)GS1 protein is 67% identical to anise t-anol/isoeugenol synthase and displays an apparent Km of 247 µM for coniferyl acetate. The catalytic efficiency of DcEOMT1 with eugenol is more than five-fold higher than that with isoeugenol, with Km values of 40 µM for eugenol, and of 115 µM for isoeugenol. This work expands the current knowledge of the enzymes involved in phenylpropene biosynthesis and would enable studies into structural elements defining the regioselectivity of phenylpropene synthases.


Subject(s)
Anisoles/metabolism , Daucus carota/metabolism , Eugenol/analogs & derivatives , Methyltransferases/metabolism , Plant Leaves/metabolism , Catalysis , DNA, Complementary/genetics , Daucus carota/enzymology , Eugenol/metabolism , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Methyltransferases/genetics , Phylogeny , Substrate Specificity , Volatile Organic Compounds/metabolism
7.
J Agric Food Chem ; 66(10): 2378-2386, 2018 Mar 14.
Article in English | MEDLINE | ID: mdl-27673494

ABSTRACT

Fruits from wild carrot ( Daucus carota L. ssp. carota) have been used for medicinal purposes since ancient times. The oil of its seeds, with their abundant monoterpenes and sesquiterpenes, has drawn attention in recent years because of its potential pharmaceutical application. A combined chemical, biochemical, and molecular study was conducted to evaluate the differential accumulation of terpene volatiles in carrot fruits of wild accessions. This work reports a similarity-based cloning strategy identification and functional characterization of one carrot monoterpene terpene synthase, WtDcTPS1. Recombinant WtDcTPS1 protein produces mainly geraniol, the predominant monoterpene in carrot seeds of wild accession 23727. The results suggest a role for the WtDcTPS1 gene in the biosynthesis of carrot fruit aroma and flavor compounds.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Daucus carota/enzymology , Plant Proteins/metabolism , Terpenes/metabolism , Acyclic Monoterpenes , Daucus carota/chemistry , Daucus carota/metabolism , Flavoring Agents/chemistry , Flavoring Agents/metabolism , Fruit/chemistry , Fruit/enzymology , Fruit/metabolism , Metabolome , Seeds/chemistry , Seeds/enzymology , Seeds/metabolism , Terpenes/chemistry
8.
Methods Mol Biol ; 1670: 219-224, 2017.
Article in English | MEDLINE | ID: mdl-28871546

ABSTRACT

The alternative oxidase (AOX) gene family is a hot candidate for functional marker development that could help plant breeding on yield stability through more robust plants based on multi-stress tolerance. However, there is missing knowledge on the interplay between gene family members that might interfere with the efficiency of marker development. It is common view that AOX1 and AOX2 have different physiological roles. Nevertheless, both family member groups act in terms of molecular-biochemical function as "typical" alternative oxidases and co-regulation of AOX1 and AOX2 had been reported. Although conserved sequence differences had been identified, the basis for differential effects on physiology regulation is not sufficiently explored.This protocol gives instructions for a bioinformatics approach that supports discovering potential interaction of AOX family members in regulating growth and development. It further provides a strategy to elucidate the relevance of gene sequence diversity and copy number variation for final functionality in target tissues and finally the whole plant. Thus, overall this protocol provides the means for efficiently identifying plant AOX variants as functional marker candidates related to growth and development.


Subject(s)
Computational Biology/methods , Daucus carota/enzymology , Daucus carota/genetics , Gene Expression Regulation, Plant , Mitochondrial Proteins/genetics , Multigene Family , Oxidoreductases/genetics , Plant Development/genetics , Plant Proteins/genetics , Base Sequence , DNA, Complementary/genetics , Genes, Plant , Molecular Sequence Annotation , RNA, Messenger/genetics , RNA, Messenger/metabolism
9.
Methods Mol Biol ; 1670: 235-244, 2017.
Article in English | MEDLINE | ID: mdl-28871548

ABSTRACT

AOX1 and AOX2 genes are thought to play different physiological roles. Whereas AOX1 is typically expected to associate to stress and growth responses, AOX2 was more often found to be linked to development and housekeeping functions. However, this view is questioned by several adverse observations. For example, co-regulated expression for DcAOX1 and DcAOX2a genes was recently reported during growth induction in carrot (Daucus carota L.). Early expression peaks for both genes during the lag phase of growth coincided with a critical time point for biomass prediction, a result achieved by applying calorespirometry. The effect of both AOX family member genes cannot easily be separated. However, separate functional analysis is required in order to identify important gene-specific polymorphisms or patterns of polymorphisms for functional marker development and its use in breeding. Specifically, a methodology is missing that enables studying functional effects of individual genes or polymorphisms/polymorphic patterns on early growth regulation.This protocol aims to provide the means for identifying plant alternative oxidase (AOX) gene variants as functional markers for early growth regulation. Prerequisite for applying this protocol is available Schizosaccharomyces pombe strains that were transformed with individual AOX genes following published protocols from Anthony Moore's group (Albury et al., J Biol Chem 271:17062-17066, 1996; Affourtit et al., J Biol Chem 274:6212-6218, 1999). The novelty of the present protocol comes by modifying yeast cell densities in a way that allows studying critical qualitative and quantitative effects of AOX gene variants (isoenzymes or polymorphic genes) during the early phase of growth. Calorimetry is used as a novel tool to confirm differences obtained by optical density measurements in early growth regulation by metabolic phenotyping (released heat rates). This protocol enables discriminating between AOX genes that inhibit growth and AOX genes that enhance growth under comparable conditions. It also allows studying dependency of AOX gene effects on gene copy number. The protocol can also be combined with laser microdissection of individual cells from target tissues for specified breeding traits.


Subject(s)
Daucus carota/enzymology , Daucus carota/growth & development , Genes, Plant , Mitochondrial Proteins/genetics , Molecular Biology/methods , Oxidoreductases/genetics , Plant Development/genetics , Plant Proteins/genetics , Calorimetry , Cell Respiration , Mitochondrial Proteins/metabolism , Oxidoreductases/metabolism , Phenotype , Plant Proteins/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development , Temperature , Transformation, Genetic
10.
Methods Mol Biol ; 1670: 245-252, 2017.
Article in English | MEDLINE | ID: mdl-28871549

ABSTRACT

Laser microdissection provides a useful method for isolating specific cell types from complex biological samples for downstream applications. In contrast to the texture of mammalian cells, most plant tissues exhibit a cell organization with hard, cellulose-containing cell walls, large vacuoles, and air spaces, thus complicating tissue preparation and extraction of macromolecules such as DNA. In this study, we report a method that allows tissue-specific gene amplification. An improved perception of genetic identity of the entire plant can contribute to improved functional marker strategies. Alternative oxidase (AOX) has crucial position for stress-induced responses/adaptation. Daucus carota sequence polymorphisms in AOX were identified, however, never at tissue/cell level. This technology will support studying AOX gene sequences in carrot organs/tissues/cells and specifically exploring differential polymorphisms in root meristem that might be associated to adaptive growth upon all kind of stresses. Details on aspects of tissue preparation, including fixation and embedding procedures, laser capture microdissection, DNA extraction, and amplification, are provided. A combination of laser microdissection and polymerase chain reaction amplification provides a powerful tool for the analysis of AOX gene amplification in methacarn-fixed paraffin-embedded tissues.


Subject(s)
Daucus carota/enzymology , Daucus carota/genetics , Genes, Plant , Laser Capture Microdissection/methods , Mitochondrial Proteins/genetics , Organ Specificity/genetics , Oxidoreductases/genetics , Plant Proteins/genetics , Desiccation , Mitochondrial Proteins/metabolism , Oxidoreductases/metabolism , Plant Proteins/metabolism , Polymerase Chain Reaction
11.
Food Chem ; 215: 116-23, 2017 Jan 15.
Article in English | MEDLINE | ID: mdl-27542457

ABSTRACT

Reactive oxygen species (ROS) have been shown to play important roles in biosynthesis of phenolic antioxidants in wounded carrots. This study has gone further to understand the effects of storage temperature on phenolics accumulation in wounded carrots. The results indicated that both increased wounding intensity and higher storage temperature promoted the generation of ROS and enhanced phenolics accumulation in wounded carrots. Moreover, treatment with ROS inhibitor inhibited ROS generation, suppressed the activities of key enzymes in phenylpropanoid pathway (phenylalanine ammonia lyase, PAL; cinnamate-4-hydroxylase, C4H; 4-coumarate coenzyme A ligase, 4CL) and restrained phenolics accumulation in shredded carrots confirming previous reports. In contrast, treatment with ROS elicitor promoted ROS generation, enhanced the activities of PAL, C4H and 4CL, and induced phenolics accumulation. Thus, our results confirmed that ROS are essential for mediating wound-induced phenolics accumulation in carrots and suggested that increase temperature enhanced the accumulation of phenolics through inducing ROS generation.


Subject(s)
Daucus carota/metabolism , Phenols/metabolism , Antioxidants/metabolism , Coenzyme A Ligases/metabolism , Daucus carota/chemistry , Daucus carota/enzymology , Phenols/chemistry , Phenylalanine Ammonia-Lyase/metabolism , Plant Proteins/metabolism , Reactive Oxygen Species/metabolism , Temperature
12.
Sci Rep ; 6: 27356, 2016 06 06.
Article in English | MEDLINE | ID: mdl-27264613

ABSTRACT

Purple carrots (Daucus carota ssp. sativus var. atrorubens Alef.) accumulate large amounts of cyanidin-based anthocyanins in their taproots. Cyanidin can be glycosylated with galactose, xylose, and glucose in sequence by glycosyltransferases resulting in cyanidin 3-xylosyl (glucosyl) galactosides in purple carrots. The first step in the glycosylation of cyanidin is catalysis by UDP-galactose: cyanidin galactosyltransferase (UCGalT) transferring the galactosyl moiety from UDP-galactose to cyanidin. In the present study, a gene from 'Deep purple' carrot, DcUCGalT1, was cloned and heterologously expressed in E. coli BL21 (DE3). The recombinant DcUCGalT1 galactosylated cyanidin to produce cyanidin-3-O-galactoside and showed optimal activity for cyanidin at 30 °C and pH 8.6. It showed lower galactosylation activity for peonidin, pelargonidin, kaempferol and quercetin. It accepted only UDP-galactose as a glycosyl donor when cyanidin was used as an aglycone. The expression level of DcUCGalT1 was positively correlated with anthocyanin biosynthesis in carrots. The enzyme extractions from 'Deep purple' exhibited galactosylation activity for cyanidin, peonidin and pelargonidin, while those from 'Kuroda' (a non-purple cultivar) did not.


Subject(s)
Anthocyanins/metabolism , Daucus carota/enzymology , Galactose/metabolism , Galactosyltransferases/metabolism , Cloning, Molecular , Enzyme Stability , Escherichia coli/genetics , Escherichia coli/metabolism , Galactosyltransferases/chemistry , Galactosyltransferases/genetics , Gene Expression , Hydrogen-Ion Concentration , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Substrate Specificity , Temperature
13.
PLoS One ; 11(5): e0154938, 2016.
Article in English | MEDLINE | ID: mdl-27171142

ABSTRACT

Purple carrots accumulate abundant cyanidin-based anthocyanins in taproots. UDP-glucose: sinapic acid glucosyltransferase (USAGT) can transfer the glucose moiety to the carboxyl group of sinapic acid thereby forming the ester bond between the carboxyl-C and the C1 of glucose (1-O-sinapoylglucose). 1-O-sinapoylglucose can serve as an acyl donor in acylation of anthocyanins and generate cyanidin 3-xylosyl (sinapoylglucosyl) galactoside in purple carrots. This final product helps stabilize the accumulation of anthocyanins. In this study, a gene named DcUSAGT1 encoding USAGT was cloned from 'Deep purple' carrot taproots. Enzymatic activity was determined using high performance liquid chromatography (HPLC). The optimal temperature and pH value were 30°C and 7.0, respectively. Kinetic analysis suggested a Km (sinapic acid) of 0.59 mM. Expression profiles of DcUSAGT1 showed high expression levels in the taproots of all the three purple carrot cultivars but low expression levels in those of non-purple carrot cultivars. The USAGT activity of different carrots in vitro indicated that crude enzyme extracted from the purple carrot taproots rather than non-purple carrot taproots exhibited USAGT activity. These results indicated that DcUSAGT1 may influence anthocyanin biosynthesis of purple carrot taproots.


Subject(s)
Coumaric Acids/metabolism , Daucus carota/enzymology , Daucus carota/genetics , Glycogen Debranching Enzyme System/metabolism , Pigmentation , Plant Roots/enzymology , Plant Roots/genetics , Uridine Diphosphate Glucose/metabolism , Amino Acid Sequence , Biosynthetic Pathways , Chromatography, High Pressure Liquid , Cinnamates/chemistry , Gene Expression Profiling , Gene Expression Regulation, Plant , Genes, Plant , Glucosides/biosynthesis , Glucosides/chemistry , Glycogen Debranching Enzyme System/chemistry , Glycogen Debranching Enzyme System/genetics , Hydrogen-Ion Concentration , Kinetics , Models, Molecular , Plant Proteins/chemistry , Plant Proteins/genetics , Plant Proteins/metabolism , Protein Domains , Recombinant Proteins/metabolism , Sequence Alignment , Sequence Analysis, Protein , Temperature
14.
J Exp Bot ; 67(8): 2325-38, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26893492

ABSTRACT

Carotenoids, chlorophylls and gibberellins are derived from the common precursor geranylgeranyl diphosphate (GGPP). One of the enzymes in carotenoid biosynthesis is lycopene ß-cyclase (LCYB) that catalyzes the conversion of lycopene into ß-carotene. In carrot, Dclcyb1 is essential for carotenoid synthesis in the whole plant. Here we show that when expressed in tobacco, increments in total carotenoids, ß-carotene and chlorophyll levels occur. Furthermore, photosynthetic efficiency is enhanced in transgenic lines. Interestingly, and contrary to previous observations where overexpression of a carotenogenic gene resulted in the inhibition of the synthesis of gibberellins, we found raised levels of active GA4 and the concommitant increases in plant height, leaf size and whole plant biomass, as well as an early flowering phenotype. Moreover, a significant increase in the expression of the key carotenogenic genes, Ntpsy1, Ntpsy2 and Ntlcyb, as well as those involved in the synthesis of chlorophyll (Ntchl), gibberellin (Ntga20ox, Ntcps and Ntks) and isoprenoid precursors (Ntdxs2 and Ntggpps) was observed. These results indicate that the expression of Dclcyb1 induces a positive feedback affecting the expression of isoprenoid gene precursors and genes involved in carotenoid, gibberellin and chlorophyll pathways leading to an enhancement in fitness measured as biomass, photosynthetic efficiency and carotenoid/chlorophyll composition.


Subject(s)
Biosynthetic Pathways , Carotenoids/metabolism , Chlorophyll/metabolism , Daucus carota/enzymology , Gibberellins/metabolism , Intramolecular Lyases/metabolism , Nicotiana/metabolism , Biomass , Biosynthetic Pathways/genetics , Gene Expression Regulation, Plant , Genes, Plant , Models, Biological , Phenotype , Photosynthesis , Plants, Genetically Modified , Nicotiana/genetics
15.
Protein J ; 34(6): 444-52, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26626349

ABSTRACT

Laccases, which belong to the blue copper oxidase enzyme family, oxidize many organic and inorganic compounds. The laccase-encoding genes DcLac1 and DcLac2 were isolated from the economically important tuberous root carrot, and their proteins were successfully expressed and purified using the Escherichia coli expression system BL21(DE3). DcLac1 and DcLac2 had molecular masses of approximately 64 and 61.9 kDa, respectively. With 2,2'-azinobis-(3-ethylbenzthiazoline-6-sulfonate acid) as the substrate, DcLac1 and DcLac2 had K m values of 3.9043 and 1.255 mM, respectively, and V max values of 54.0832 and 81.7996 µM mg(-1) min(-1), respectively. Moreover, DcLac1 and DcLac2 had optimal pH values of 2.8 and 2.6, respectively, and optimal temperatures of 45 and 40 °C, respectively. The activities of the two enzymes were promoted by Ca(2+), Mg(2+), Cu(2+), and Na(+) but inhibited by Fe(2+), Zn(2+), Mn(2+), K(+), SDS, and EDTA. Expression profiles showed that the two DcLac genes had almost identical responses to high and low temperature stresses but different responses to salt, drought, and metal stresses. This study provided insights into the characteristics and tolerance response mechanisms of laccase in carrot.


Subject(s)
Daucus carota/enzymology , Laccase/isolation & purification , Laccase/metabolism , Plant Proteins/isolation & purification , Plant Proteins/metabolism , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Daucus carota/genetics , Enzyme Stability , Hydrogen-Ion Concentration , Laccase/chemistry , Laccase/genetics , Metals/toxicity , Plant Proteins/chemistry , Plant Proteins/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Stress, Physiological/drug effects , Stress, Physiological/physiology , Temperature
16.
J Agric Food Chem ; 63(19): 4870-8, 2015 May 20.
Article in English | MEDLINE | ID: mdl-25924989

ABSTRACT

Plants produce an excess of volatile organic compounds, which are important in determining the quality and nutraceutical properties of fruit and root crops, including the taste and aroma of carrots (Daucus carota L.). A combined chemical, biochemical, and molecular study was conducted to evaluate the differential accumulation of volatile terpenes in a diverse collection of fresh carrots (D. carota L.). Here, we report on a transcriptome-based identification and functional characterization of two carrot terpene synthases, the sesquiterpene synthase, DcTPS1, and the monoterpene synthase, DcTPS2. Recombinant DcTPS1 protein produces mainly (E)-ß-caryophyllene, the predominant sesquiterpene in carrot roots, and α-humulene, while recombinant DcTPS2 functions as a monoterpene synthase with geraniol as the main product. Both genes are differentially transcribed in different cultivars and during carrot root development. Our results suggest a role for DcTPS genes in carrot aroma biosynthesis.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Daucus carota/enzymology , Plant Proteins/metabolism , Terpenes/metabolism , Alkyl and Aryl Transferases/genetics , Daucus carota/chemistry , Daucus carota/genetics , Daucus carota/metabolism , Plant Proteins/genetics , Plant Roots/chemistry , Plant Roots/enzymology , Plant Roots/genetics , Plant Roots/metabolism , Terpenes/analysis , Volatile Organic Compounds/analysis , Volatile Organic Compounds/metabolism
17.
PLoS One ; 10(1): e0116674, 2015.
Article in English | MEDLINE | ID: mdl-25614987

ABSTRACT

Accumulated in large amounts in carrot, carotenoids are an important product quality attribute and therefore a major breeding trait. However, the knowledge of carotenoid accumulation genetic control in this root vegetable is still limited. In order to identify the genetic variants linked to this character, we performed an association mapping study with a candidate gene approach. We developed an original unstructured population with a broad genetic basis to avoid the pitfall of false positive detection due to population stratification. We genotyped 109 SNPs located in 17 candidate genes ­ mostly carotenoid biosynthesis genes ­ on 380 individuals, and tested the association with carotenoid contents and color components. Total carotenoids and ß-carotene contents were significantly associated with genes zeaxanthin epoxydase (ZEP), phytoene desaturase (PDS) and carotenoid isomerase (CRTISO) while α-carotene was associated with CRTISO and plastid terminal oxidase (PTOX) genes. Color components were associated most significantly with ZEP. Our results suggest the involvement of the couple PDS/PTOX and ZEP in carotenoid accumulation, as the result of the metabolic and catabolic activities respectively. This study brings new insights in the understanding of the carotenoid pathway in non-photosynthetic organs.


Subject(s)
Carotenoids/biosynthesis , Daucus carota/chemistry , Daucus carota/enzymology , Plant Proteins/genetics , Biosynthetic Pathways , Carotenoids/analysis , Daucus carota/anatomy & histology , Daucus carota/genetics , Genetic Association Studies , Oxidoreductases/genetics , Plant Roots/chemistry , Plant Roots/enzymology , Plant Roots/genetics , Polymorphism, Single Nucleotide , cis-trans-Isomerases/genetics
18.
Mol Genet Metab ; 112(1): 1-8, 2014 May.
Article in English | MEDLINE | ID: mdl-24630271

ABSTRACT

Gaucher disease (GD) is a rare, genetic lysosomal storage disorder caused by functional defects of acid ß-glucosidase that results in multiple organ dysfunction. Glycosylation of recombinant acid human ß-glucosidase and exposure of terminal mannose residues are critical to the success of enzyme replacement therapy (ERT) for the treatment of visceral and hematologic manifestations in GD. Three commercially available ERT products for treatment of GD type 1 (GD1) include imiglucerase, velaglucerase alfa, and taliglucerase alfa. Imiglucerase and velaglucerase alfa are produced in different mammalian cell systems and require production glycosylation modifications to expose terminal α-mannose residues, which are needed for mannose receptor-mediated uptake by target macrophages. Such modifications add to production costs. Taliglucerase alfa is a plant cell-expressed acid ß-glucosidase approved in the United States and other countries for ERT in adults with GD1. A plant-based expression system, using carrot root cell cultures, was developed for production of taliglucerase alfa and does not require additional processing for postproduction glycosidic modifications. Clinical trials have demonstrated that taliglucerase alfa is efficacious, with a well-established safety profile in adult, ERT-naïve patients with symptomatic GD1, and for such patients previously treated with imiglucerase. These included significant improvements in organomegaly and hematologic parameters as early as 6months, and maintenance of achieved therapeutic values in previously treated patients. Ongoing clinical trials will further characterize the long-term efficacy and safety of taliglucerase alfa in more diverse patient populations, and may help to guide clinical decisions for achieving optimal outcomes for patients with GD1.


Subject(s)
Daucus carota/enzymology , Gaucher Disease/drug therapy , Glucosylceramidase/administration & dosage , Glucosylceramidase/pharmacokinetics , Plants/genetics , Clinical Trials as Topic , Enzyme Replacement Therapy/economics , Gaucher Disease/pathology , Glucosylceramidase/therapeutic use , Humans , Plant Cells/metabolism
19.
Int J Food Sci Nutr ; 65(1): 28-33, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24112293

ABSTRACT

This study was conducted to evaluate the combined effects of blanching and sonication on carrot juice quality. Carrots were blanched at 100 °C for 4 min in normal and acidified water. Juice was extracted and sonicated at 15 °C for 2 min keeping pulse duration 5 s on and 5 s off (70% amplitude level and 20 kHz frequency). No significant effect of blanching and sonication was observed on Brix, pH and titratable acidity except acidified blanching that decreased pH and increased acidity significantly. Peroxidase was inactivated after blanching that also significantly decreased total phenol, flavonoids, tannins, free radical scavenging activity, antioxidant capacity and ascorbic acid and increased cloud and color values. Sonication could improve all these parameters significantly. The present results suggest that combination of blanching and sonication may be employed in food industry to produce high-quality carrot juice with reduced enzyme activity and improved nutrition.


Subject(s)
Beverages/analysis , Daucus carota/chemistry , Food Handling , Food Quality , Plant Roots/chemistry , Antioxidants/analysis , Ascorbic Acid/analysis , China , Cooking , Daucus carota/enzymology , Enzyme Stability , Flavonoids/analysis , Humans , Hydrogen-Ion Concentration , Nutritive Value , Peroxidase/chemistry , Peroxidase/metabolism , Phenols/analysis , Pigmentation , Plant Proteins, Dietary/chemistry , Plant Proteins, Dietary/metabolism , Plant Roots/enzymology , Sonication/adverse effects , Tannins/analysis
20.
Food Chem ; 146: 538-47, 2014 Mar 01.
Article in English | MEDLINE | ID: mdl-24176379

ABSTRACT

The objective of this research was to study the enzyme kinetics and thermostability of endogenous ascorbic acid oxidase (AAO) in carrot purée (Daucus carota cv. Nantes) after being treated with pulsed electric field (PEF) processing. Various PEF treatments using electric field strength between 0.2 and 1.2kV/cm and pulsed electrical energy between 1 and 520kJ/kg were conducted. The enzyme kinetics and the kinetics of AAO thermal inactivation (55-70°C) were described using Michaelis-Menten model and first order reaction model, respectively. Overall, the estimated Vmax and KM values were situated in the same order of magnitude as the untreated carrot purée after being exposed to pulsed electrical energy between 1 and 400kJ/kg, but slightly changed at pulsed electrical energy above 500kJ/kg. However, AAO presented different thermostability depending on the electric field strength applied. After PEF treatment at the electric field strength between 0.2 and 0.5kV/cm, AAO became thermolabile (i.e. increase in inactivation rate (k value) at reference temperature) but the temperature dependence of k value (Ea value) for AAO inactivation in carrot purée decreased, indicating that the changes in k values were less temperature dependent. It is obvious that PEF treatment affects the temperature stability of endogenous AAO. The changes in enzyme kinetics and thermostability of AAO in carrot purée could be related to the resulting carrot purée composition, alteration in intracellular environment and the effective concentration of AAO released after being subjected to PEF treatment.


Subject(s)
Daucus carota/enzymology , Oxidoreductases/chemistry , Plant Proteins/chemistry , Ascorbic Acid/metabolism , Daucus carota/chemistry , Daucus carota/metabolism , Electricity , Hot Temperature , Kinetics , Oxidoreductases/metabolism , Plant Proteins/metabolism , Protein Stability
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