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1.
J Mol Biol ; 432(24): 166711, 2020 12 04.
Article in English | MEDLINE | ID: mdl-33197463

ABSTRACT

Expression of the Human Endogenous Retrovirus Type K (HERV-K), the youngest and most active HERV, has been associated with various cancers and neurodegenerative diseases. As in all retroviruses, a fraction of HERV-K transcripts is exported from the nucleus in unspliced or incompletely spliced forms to serve as templates for translation of viral proteins. In a fraction of HERV-K loci (Type 2 proviruses), nuclear export of the unspliced HERV-K mRNA appears to be mediated by a cis-acting signal on the mRNA, the RcRE, and the protein Rec-these are analogous to the RRE-Rev system in HIV-1. Interestingly, the HIV-1 Rev protein is able to mediate the nuclear export of the HERV-K RcRE, contributing to elevated HERV-K expression in HIV-infected patients. We aimed to understand the structural basis for HIV Rev-HERV-K RcRE recognition. We examined the conformation of the RcRE RNA in solution using small-angle X-ray scattering (SAXS) and atomic force microscopy (AFM). We found that the 433-nt long RcRE can assume folded or extended conformations as observed by AFM. SAXS analysis of a truncated RcRE variant revealed an "A"-shaped topological structure similar to the one previously reported for the HIV-1 RRE. The effect of the overall topology was examined using several deletion variants. SAXS and biochemical analyses demonstrated that the "A" shape is necessary for efficient Rev-RcRE complex formation in vitro and nuclear export activity in cell culture. The findings provide insight into the mechanism of HERV-K expression and a structural explanation for HIV-1 Rev-mediated expression of HERV-K in HIV-infected patients. IMPORTANCE: Expression of the human endogenous retrovirus type K (HERV-K) has been associated with various cancers and autoimmune diseases. Nuclear export of both HIV-1 and HERV-K mRNAs is dependent on the interaction between a small viral protein (Rev in HIV-1 and Rec in HERV-K) and a region on the mRNA (RRE in HIV-1 and RcRE in HERV-K). HIV-1 Rev is able to mediate the nuclear export of RcRE-containing HERV-K mRNAs, which contributes to elevated production of HERV-K proteins in HIV-infected patients. We report the solution conformation of the RcRE RNA-the first three-dimensional topological structure for a HERV molecule-and find that the RcRE resembles the HIV-1 nuclear export signal, RRE. The finding reveals the structural basis for the increased HERV-K expression observed in HIV-infected patients. Elevated HERV expression, mediated by HIV infection or other stressors, can have various HERV-related biological consequences. The findings provide structural insight for regulation of HERV-K expression.


Subject(s)
Endogenous Retroviruses/genetics , HIV Infections/genetics , HIV-1/genetics , rev Gene Products, Human Immunodeficiency Virus/genetics , Active Transport, Cell Nucleus/genetics , Binding Sites/genetics , Cell Nucleus/genetics , Cell Nucleus/ultrastructure , Endogenous Retroviruses/pathogenicity , Endogenous Retroviruses/ultrastructure , Gene Expression Regulation, Viral/genetics , HIV Infections/virology , HIV-1/pathogenicity , Humans , RNA, Viral/genetics , Response Elements/genetics , Scattering, Small Angle , X-Ray Diffraction , rev Gene Products, Human Immunodeficiency Virus/ultrastructure
2.
Nat Commun ; 10(1): 5822, 2019 12 20.
Article in English | MEDLINE | ID: mdl-31862888

ABSTRACT

The HML2 (HERV-K) group constitutes the most recently acquired family of human endogenous retroviruses, with many proviruses less than one million years old. Many maintain intact open reading frames and provirus expression together with HML2 particle formation are observed in early stage human embryo development and are associated with pluripotency as well as inflammatory disease, cancers and HIV-1 infection. Here, we reconstruct the core structural protein (CA) of an HML2 retrovirus, assemble particles in vitro and employ single particle cryogenic electron microscopy (cryo-EM) to determine structures of four classes of CA Fullerene shell assemblies. These icosahedral and capsular assemblies reveal at high-resolution the molecular interactions that allow CA to form both pentamers and hexamers and show how invariant pentamers and structurally plastic hexamers associate to form the unique polyhedral structures found in retroviral cores.


Subject(s)
Capsid Proteins/ultrastructure , Capsid/ultrastructure , Endogenous Retroviruses/ultrastructure , Fullerenes/chemistry , Protein Structure, Quaternary , Capsid Proteins/genetics , Capsid Proteins/isolation & purification , Cryoelectron Microscopy/methods , Crystallography, X-Ray , Nuclear Magnetic Resonance, Biomolecular , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/ultrastructure , Single Molecule Imaging/methods
3.
Virus Res ; 227: 34-40, 2017 01 02.
Article in English | MEDLINE | ID: mdl-27677465

ABSTRACT

Xenotransplantation of pig islet cells is a promising alternative for the treatment of diabetes with insulin and may help to prevent numerous late complications such as blindness and amputation. First encouraging results using porcine islets have been reported in preclinical animal models as well in the first clinical trial in New Zealand. The goal of this manuscript is to examine the biological safety of a second trial performed in Argentina, specifically in regards to the transmission of porcine endogenous retroviruses (PERVs) using improved detection methods As in the first trial encapsulated islet cells from the well-characterised Auckland Island pigs were used. The animals were not genetically modified. The islet cells were transplanted in eight human recipients using a modified clinical protocol. Sera taken at different time points after transplantation (up to 55 weeks) were screened for the presence of antibodies against PERV proteins by Western blot analysis using viral antigens from highly purified virus particles. Positive sera obtained by immunization with recombinant PERV proteins were used as control sera. In none of the patients antibodies against PERV were detected, indicating the absence of infection. In parallel at different time points (up to 113 weeks) white blood cells (WBC) have been tested for PERV DNA, and WBC and plasma for PERV RNA by real-time RT-PCR. All tests were negative. In addition, using primers detecting pig mitochondrial cytochrome oxidase (COX) gene, patients were screened for microchimerism. In summary, the data are further evidence for the safety of pig islet cell transplantation.


Subject(s)
Endogenous Retroviruses/genetics , Islets of Langerhans Transplantation , Islets of Langerhans/virology , Retroviridae Infections/transmission , Animals , Argentina , Clinical Trials as Topic , Endogenous Retroviruses/ultrastructure , Humans , Islets of Langerhans Transplantation/adverse effects , Swine , Transplantation, Heterologous
4.
Virology ; 485: 96-103, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26218214

ABSTRACT

Endogenous retroviruses (ERVs) were acquired during evolution of their host organisms after infection and mendelian inheritance in the germline by their exogenous counterparts. The ERVs can spread in the host genome and in some cases they affect the host phenotype. The cervid endogenous gammaretrovirus (CrERV) is one of only a few well-defined examples of evolutionarily recent invasion of mammalian genome by retroviruses. Thousands of insertionally polymorphic CrERV integration sites have been detected in wild ranging mule deer (Odocoileus hemionus) host populations. Here, we describe for the first time induction of replication competent CrERV by cocultivation of deer and human cells. We characterize the physical properties and tropism of the induced virus. The genomic sequence of the induced virus is phylogenetically related to the evolutionarily young endogenous CrERVs described so far. We also describe the level of replication block of CrERV on deer cells and its capacity to establish superinfection interference.


Subject(s)
Deer/virology , Endogenous Retroviruses/genetics , Gammaretrovirus/genetics , Genome, Viral , Virion/genetics , Animals , Biological Evolution , Cell Line, Tumor , Coculture Techniques , Endogenous Retroviruses/classification , Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/ultrastructure , Epithelial Cells/ultrastructure , Epithelial Cells/virology , Gammaretrovirus/classification , Gammaretrovirus/isolation & purification , Gammaretrovirus/ultrastructure , HEK293 Cells , Humans , Phylogeny , Virion/isolation & purification , Virion/ultrastructure , Virus Replication
5.
Viruses ; 6(11): 4332-45, 2014 Nov 11.
Article in English | MEDLINE | ID: mdl-25393897

ABSTRACT

The HERV-K(HML-2) family contains the most recently integrated and best preserved endogenized proviral sequences in the human genome. All known elements have nevertheless been subjected to mutations or deletions that render expressed particles non-infectious. Moreover, these post-insertional mutations hamper the analysis of the general biological properties of this ancient virus family. The expression of consensus sequences and sequences of elements with reverted post-insertional mutations has therefore been very instrumental in overcoming this limitation. We investigated the particle morphology of a recently reconstituted HERV-K113 element termed oriHERV-K113 using thin-section electron microscopy (EM) and could demonstrate that strong overexpression by substitution of the 5'LTR for a CMV promoter and partial codon optimization altered the virus assembly type and morphology. This included a conversion from the regular C-type to an A-type morphology with a mass of cytoplasmic immature cores tethered to the cell membrane and the membranes of vesicles. Overexpression permitted the release and maturation of virions but reduced the envelope content. A weaker boost of virus expression by Staufen-1 was not sufficient to induce these morphological alterations.


Subject(s)
Cytomegalovirus/genetics , Endogenous Retroviruses/physiology , Endogenous Retroviruses/ultrastructure , Gene Expression Regulation, Viral , Promoter Regions, Genetic , Virus Assembly , Cell Line , Endogenous Retroviruses/genetics , Humans , Microscopy, Electron, Transmission , Virion/ultrastructure
6.
PLoS Pathog ; 8(3): e1002591, 2012.
Article in English | MEDLINE | ID: mdl-22479180

ABSTRACT

Virus-like particles (VLPs) have not been observed in Caenorhabditis germ cells, although nematode genomes contain low numbers of retrotransposon and retroviral sequences. We used electron microscopy to search for VLPs in various wild strains of Caenorhabditis, and observed very rare candidate VLPs in some strains, including the standard laboratory strain of C. elegans, N2. We identified the N2 VLPs as capsids produced by Cer1, a retrotransposon in the Gypsy/Ty3 family of retroviruses/retrotransposons. Cer1 expression is age and temperature dependent, with abundant expression at 15°C and no detectable expression at 25°C, explaining how VLPs escaped detection in previous studies. Similar age and temperature-dependent expression of Cer1 retrotransposons was observed for several other wild strains, indicating that these properties are common, if not integral, features of this retroelement. Retrotransposons, in contrast to DNA transposons, have a cytoplasmic stage in replication, and those that infect non-dividing cells must pass their genomic material through nuclear pores. In most C. elegans germ cells, nuclear pores are largely covered by germline-specific organelles called P granules. Our results suggest that Cer1 capsids target meiotic germ cells exiting pachytene, when free nuclear pores are added to the nuclear envelope and existing P granules begin to be removed. In pachytene germ cells, Cer1 capsids concentrate away from nuclei on a subset of microtubules that are exceptionally resistant to microtubule inhibitors; the capsids can aggregate these stable microtubules in older adults, which exhibit a temperature-dependent decrease in egg viability. When germ cells exit pachytene, the stable microtubules disappear and capsids redistribute close to nuclei that have P granule-free nuclear pores. This redistribution is microtubule dependent, suggesting that capsids that are released from stable microtubules transfer onto new, dynamic microtubules to track toward nuclei. These studies introduce C. elegans as a model to study the interplay between retroelements and germ cell biology.


Subject(s)
Aging/genetics , Caenorhabditis elegans/virology , Endogenous Retroviruses/genetics , Gene Expression Regulation, Viral , Germ Cells/virology , RNA-Directed DNA Polymerase/genetics , Animals , Caenorhabditis elegans/enzymology , Caenorhabditis elegans/genetics , Capsid/enzymology , Capsid/ultrastructure , Capsid/virology , DNA, Helminth/genetics , Endogenous Retroviruses/ultrastructure , Germ Cells/enzymology , Germ Cells/ultrastructure , Temperature
7.
J Virol ; 85(13): 6579-88, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21543506

ABSTRACT

Endogenous retroviral sequences are present in high copy numbers in the genomes of all species and may be expressed as RNAs; however, the majority are defective for virus production. Although virus has been isolated from various Old World monkey and New World monkey species, there has been no report of endogenous retroviruses produced from African green monkey (AGM) tissues or cell lines. We have recently developed a stepwise approach for evaluating the presence of latent viruses by chemical induction (Khan et al., Biologicals 37:196-201, 2009). Based upon this strategy, optimum conditions were determined for investigating the presence of inducible, endogenous retroviruses in the AGM-derived Vero cell line. Low-level reverse transcriptase activity was produced with 5-azacytidine (AzaC) and with 5'-iodo-2'-deoxyuridine (IUdR); none was detected with sodium butyrate. Nucleotide sequence analysis of PCR-amplified fragments from the gag, pol, and env regions of RNAs, prepared from ultracentrifuged pellets of filtered supernatants, indicated that endogenous retrovirus particles related to simian endogenous type D betaretrovirus (SERV) sequences and baboon endogenous virus type C gammaretrovirus (BaEV) sequences were induced by AzaC, whereas SERV sequences were also induced by IUdR. Additionally, sequence heterogeneity was seen in the RNAs of SERV- and BaEV-related particles. Infectivity analysis of drug-treated AGM Vero cells showed no virus replication in cell lines known to be susceptible to type D simian retroviruses (SRVs) and to BaEV. The results indicated that multiple, inducible endogenous retrovirus loci are present in the AGM genome that can encode noninfectious, viruslike particles.


Subject(s)
Azacitidine/pharmacology , Endogenous Retroviruses/physiology , Idoxuridine/pharmacology , Kidney/virology , Virion/physiology , Virus Activation , Algorithms , Animals , Base Sequence , Chlorocebus aethiops , Endogenous Retroviruses/drug effects , Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/ultrastructure , Kidney/cytology , Molecular Sequence Data , Sequence Analysis, DNA , Vero Cells/virology , Virion/drug effects , Virion/ultrastructure
8.
Ann Transplant ; 15(2): 45-54, 2010.
Article in English | MEDLINE | ID: mdl-20657519

ABSTRACT

BACKGROUND: Porcine endogenous retroviruses (PERVs) pose a potential risk for xenotransplantation using pig cells, tissues or organs. A special threat comes from viruses generated by recombination between human-tropic PERV-A and ecotropic PERV-C. Serial passages of a recombinant PERV-A/C on human 293 cells resulted in increased infectious titers and a multimerization of transcription factor binding sites in the viral long terminal repeat (LTR). In contrast to the LTR, the sequence of the env gene did not change, indicating that the LTR represents the determinant of high infectivity. MATERIAL/METHODS: The virus was further propagated on human cells and characterized by different methods (titration, sequencing, infection experiments, electron microscopy). RESULTS: Further propagation on human 293 cells resulted in deletions and mutations in the LTR. In contrast to low-titer viruses, the high-titer virus was infectious for cells from non-human primates including chimpanzees. Scanning electron microscopy revealed clustering of budding virions at the cell surface of infected human cells and transmission electron microscopy indicated that the virus infects them via receptor-mediated endocytosis. CONCLUSIONS: After propagation of PERV on human cells without selection pressure, viruses with different LTR were generated. High titer PERV was shown to infect cells from non-human primates. The experiments performed here simulate the situation in vivo and give an extended characterization of human cell-adapted PERVs.


Subject(s)
Endogenous Retroviruses/genetics , Endogenous Retroviruses/pathogenicity , Swine/virology , Animals , Base Sequence , Cell Line , DNA, Viral/genetics , Endogenous Retroviruses/classification , Endogenous Retroviruses/ultrastructure , Humans , Macaca mulatta , Microscopy, Electron, Scanning , Molecular Sequence Data , Pan troglodytes , RNA Splicing , RNA, Viral/genetics , Recombination, Genetic , Sequence Homology, Nucleic Acid , Species Specificity , Terminal Repeat Sequences , Virus Cultivation
9.
Acta Virol ; 53(3): 169-74, 2009.
Article in English | MEDLINE | ID: mdl-19941398

ABSTRACT

A major concern in pig-to-human xenotransplantations is the potential risk of transmission of Porcine endogenous retroviruses (PERVs) integrated in the pig genome. Our previous work has shown that PERV provirus genes and gag protein can be detected in human embryonic kidney HEK-293 cells during a long-term infection with PERV (Yu et al., Transplant. Proc. 37, 496-499, 2005). In this study, we continued studying the long-term (>6 months) PERV infection of HEK-293 cells. The results showed no significant differences in morphology, growth, apoptosis, and [(3)H]-thymidine incorporation between PERV-infected and uninfected cells. The PERV LTR sequence showed only an insignifcant mutation after the long-term infection. PERV infection had no effect on the transcription of genes of Human endogenous retrovirus (HERV) naturally occurring in HEK-293 cells. Summing up, this study indicated that a long-term PERV infection of HEK-293 cells in vitro does not result in any significant changes in host cells as well as in PERV LTR sequence.


Subject(s)
Endogenous Retroviruses/genetics , Swine/virology , Animals , Apoptosis , Cell Line , Endogenous Retroviruses/growth & development , Endogenous Retroviruses/ultrastructure , Gene Products, gag/analysis , Humans , Mutation , Terminal Repeat Sequences , Transplantation, Heterologous
10.
J Neurovirol ; 15(1): 4-13, 2009 Jan.
Article in English | MEDLINE | ID: mdl-19039700

ABSTRACT

This mini-review summarizes current knowledge of MSRV (multiple sclerosis-associated retrovirus), founder member of the type W family of human endogenous retroviruses (HERVs), its pathogenic potential and association with diseases. As retrotransposable elements, HERVs behave differently from stable genes, and cannot be studied with "Mendelian genetics" concepts only. They also display complex interactions with other HERV families, and with classical viruses. These concepts may contribute to unravelling the etiopathogenesis of complex diseases such as multiple sclerosis, schizophrenia, and other chronic multifactorial diseases.


Subject(s)
Endogenous Retroviruses/pathogenicity , Multiple Sclerosis/immunology , Multiple Sclerosis/virology , Animals , Diagnosis, Differential , Endogenous Retroviruses/physiology , Endogenous Retroviruses/ultrastructure , Humans , Multiple Sclerosis/diagnosis , Multiple Sclerosis/epidemiology , Prognosis , Schizophrenia/diagnosis , Schizophrenia/epidemiology , Schizophrenia/immunology , Schizophrenia/virology , Viral Envelope Proteins/genetics , Viral Envelope Proteins/immunology
11.
Microbiol Mol Biol Rev ; 72(1): 157-96, table of contents, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18322038

ABSTRACT

Retroviruses are an important group of pathogens that cause a variety of diseases in humans and animals. Four human retroviruses are currently known, including human immunodeficiency virus type 1, which causes AIDS, and human T-lymphotropic virus type 1, which causes cancer and inflammatory disease. For many years, there have been sporadic reports of additional human retroviral infections, particularly in cancer and other chronic diseases. Unfortunately, many of these putative viruses remain unproven and controversial, and some retrovirologists have dismissed them as merely "human rumor viruses." Work in this field was last reviewed in depth in 1984, and since then, the molecular techniques available for identifying and characterizing retroviruses have improved enormously in sensitivity. The advent of PCR in particular has dramatically enhanced our ability to detect novel viral sequences in human tissues. However, DNA amplification techniques have also increased the potential for false-positive detection due to contamination. In addition, the presence of many families of human endogenous retroviruses (HERVs) within our DNA can obstruct attempts to identify and validate novel human retroviruses. Here, we aim to bring together the data on "novel" retroviral infections in humans by critically examining the evidence for those putative viruses that have been linked with disease and the likelihood that they represent genuine human infections. We provide a background to the field and a discussion of potential confounding factors along with some technical guidelines. In addition, some of the difficulties associated with obtaining formal proof of causation for common or ubiquitous agents such as HERVs are discussed.


Subject(s)
Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/physiology , Retroviridae Infections/virology , Chronic Disease , Endogenous Retroviruses/ultrastructure , Humans , Virology/methods
12.
Genome Res ; 18(4): 597-609, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18256233

ABSTRACT

Mammalian genomes contain a high load of mobile elements among which long terminal repeat (LTR)- retrotransposons may represent up to 10% of the genomic DNA. The murine intracisternal A-type particle (IAP) sequences, the prototype of these mammalian "genetic parasites," have an intracellular replicative life cycle and are responsible for a very large fraction of insertional mutagenesis in mice. Yet, phylogenetic analyses strongly suggest that they derive from an ancestral retrovirus that has reached the germline of a remote rodent ancestor and has been "endogenized." A genome-wide screening of the mouse genome now has led us to identify the likely progenitor of the intracellular IAP retrotransposons. This identified "living fossil"-that we found to be present only as a single fully active copy-discloses all the characteristics of a bona fide retrovirus, with evidence for particle formation at the cell membrane, and release of virions with a mature morphology that are infectious. We show, by generating appropriate chimeras, that IAPs derive from this element via passive loss of its env gene, and gain of an endoplasmic reticulum targeting signal, resulting in its "intracellularization" and in the gain of transpositional activity. The identification within the mouse genome of the still active retroviral progenitor of the IAP endogenous mobile elements and the experimental dissection of the molecular events responsible for the shift in its life cycle provide a conclusive illustration of the process that has led, during evolution, to the generation of very successful intracellular retrotransposons from ancient retroviruses.


Subject(s)
Endogenous Retroviruses/genetics , Genes, Intracisternal A-Particle , Amino Acid Sequence , Animals , Cell Line , Cricetinae , Endogenous Retroviruses/metabolism , Endogenous Retroviruses/ultrastructure , Endoplasmic Reticulum/ultrastructure , Evolution, Molecular , Gene Products, env/chemistry , Genes, env , Genomics , Humans , Mice , Models, Genetic , Molecular Sequence Data , Proviruses/metabolism , Virion/ultrastructure
13.
J Virol ; 81(4): 1888-98, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17151128

ABSTRACT

We had previously identified active autonomous copies of the MusD long terminal repeat-retrotransposon family, which have retained transpositional activity. These elements are closely related to betaretroviruses but lack an envelope (env) gene. Here we show that these elements encode strictly intracellular virus-like particles that can unambiguously be identified by electron microscopy. We demonstrate intracellular maturation of the particles, with a significant proportion of densely packed cores for wild-type MusD but not for a protease mutant. We show that the molecular origin of this unexpected intracellular localization is solely dependent on the N-terminal part of the Gag protein, which lacks a functional sequence for myristoylation and plasma membrane targeting: replacement of the N-terminal domain of the MusD matrix protein by that of its closest relative-the Mason-Pfizer monkey virus-led to targeting of the MusD Gag to the plasma membrane, with viral particles budding and being released into the cell supernatant. These particles can further be pseudotyped with a heterologous envelope protein and become infectious, thus "reconstituting" a functional retrovirus prone to proviral insertions. Consistent with its retroviral origin, a sequence with a constitutive transport element-like activity can further be identified at the MusD 3' untranslated region. A molecular scenario is proposed that accounts for the transition, during evolution, from an ancestral infectious betaretrovirus to the strictly intracellular MusD retrotransposon, involving not only the loss of the env gene but also an inability to escape the cell--via altered targeting of the Gag protein--resulting de facto in the generation of a very successful "intracellularized" insertional mutagen.


Subject(s)
Endogenous Retroviruses/genetics , Evolution, Molecular , Proviruses/genetics , 3' Untranslated Regions/genetics , Amino Acid Sequence , Animals , Cats , Cells, Cultured , Endogenous Retroviruses/ultrastructure , Female , Gene Products, gag/genetics , Gene Products, gag/metabolism , Humans , Mice , Microscopy, Electron , Molecular Sequence Data , Protein Structure, Tertiary/genetics , Proviruses/ultrastructure , Sequence Alignment , Subcellular Fractions/ultrastructure , Subcellular Fractions/virology , Viral Matrix Proteins
14.
J Virol ; 80(20): 10258-61, 2006 Oct.
Article in English | MEDLINE | ID: mdl-17005704

ABSTRACT

Xenotransplantation of pig organs is complicated by the existence of polytropic replication-competent porcine endogenous retroviruses (PERV) capable of infecting human cells. The potential for recombination between ecotropic PERV-C and human-tropic PERV-A and PERV-B adds another level of infectious risk. Proviral PERV-C were characterized in MAX-T cells derived from d/d haplotype miniature swine. Three proviruses were cloned from a genomic library. Clone PERV-C(1312) generated infectious particles after transfection into porcine ST-IOWA cells. Electron microscopy revealed the same morphologies of virions in MAX-T cells and in ST-IOWA cells infected with cell-free PERV-C(1312) particles, indicating that MAX-T cells harbor one functional PERV-C provirus.


Subject(s)
Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/physiology , Virus Replication , Animals , Cell Line , Cloning, Molecular , Endogenous Retroviruses/genetics , Endogenous Retroviruses/ultrastructure , Microscopy, Electron, Transmission , Proviruses/genetics , Swine , Transfection , Virion/ultrastructure
15.
Cytogenet Genome Res ; 111(1): 88-95, 2005.
Article in English | MEDLINE | ID: mdl-16093726

ABSTRACT

Transposition of 1731, a Drosophila melanogaster LTR retrotransposon, was investigated in reproductive organs by RNA, protein and VLP distribution during its life cycle. We detected 1731 transcription in oogonia but not in spermatogonia; in all cells during oogenesis but only in primary spermatocytes; and in ovarian cytoplasm but both in nuclei and cytoplasm of primary spermatocytes. By confocal scanning, we showed that whereas Gag protein appeared in all cytoplasms during oogenesis, in testes Gag detection began in late premeiotic primary spermatocytes and increased in elongating spermatids suggesting distinct mechanisms of 1731 transcription and translation regulation. By electron microscopy, we did not detect 1731 VLPs in ovaries, suggesting a complex post-translational control blocking VLP assembly and transposition. Interestingly, in testes we discovered VLP aggregates in cystic cytoplasm of maturing partially individualized spermatids. In testes, we observed two delays in 1731 product expressions, suggesting a complex temporal control mechanism. Transcriptional/translational delay may be determined by accumulation of 1731 RNAs in primary spermatocyte nuclei. Translational/VLP assembly delay may be determined by post-transductional mechanisms controlling +1 frameshift and Pol-protein degradation. Our results indicated two differential mechanisms inhibiting 1731 transposition in Drosophila melanogaster ovaries and testes. In addition, we proposed a new mechanism for transposition control at the cell cycle level.


Subject(s)
Drosophila melanogaster/virology , Endogenous Retroviruses/genetics , Retroelements , Animals , Drosophila melanogaster/ultrastructure , Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/ultrastructure , Female , Gene Products, env/genetics , Immunohistochemistry , In Situ Hybridization , Male , Ovary/ultrastructure , Terminal Repeat Sequences/genetics , Testis/ultrastructure
16.
Rev Med Virol ; 15(3): 179-211, 2005.
Article in English | MEDLINE | ID: mdl-15782388

ABSTRACT

The hypothesis that human endogenous retroviruses (HERVs) play a role in autoimmune diseases is subject to increasing attention. HERVs represent both putative susceptibility genes and putative pathogenic viruses in the immune-mediated neurological disease multiple sclerosis (MS). Gammaretroviral HERV sequences are found in reverse transcriptase-positive virions produced by cultured mononuclear cells from MS patients, and they have been isolated from MS samples of plasma, serum and CSF, and characterised to some extent at the nucleotide, protein/enzyme, virion and immunogenic level. Two types of sequences, HERV-H and HERV-W, have been reported. No known HERV-H or HERV-W copy contains complete ORFs in all prerequisite genes, although several copies have coding potential, and several such sequences are specifically activated in MS, apparently resulting in the production of complete, competent virions. Increased antibody reactivity to specific Gammaretroviral HERV epitopes is found in MS serum and CSF, and cell-mediated immune responses have also been reported. Further, HERV-encoded proteins can have neuropathogenic effects. The activating factor(s) in the process resulting in protein or virion production may be members of the Herpesviridae. Several herpes viruses, such as HSV-1, VZV, EBV and HHV-6, have been associated with MS pathogenesis, and retroviruses and herpes viruses have complex interactions. The current understanding of HERVs, and specifically the investigations of HERV activation and expression in MS are the major subjects of this review, which also proposes to synergise the herpes and HERV findings, and presents several possible pathogenic mechanisms for HERVs in MS.


Subject(s)
Endogenous Retroviruses/physiology , Herpesviridae/physiology , Multiple Sclerosis/virology , Antibodies, Viral/blood , Cells, Cultured , Cytokines/metabolism , Endogenous Retroviruses/immunology , Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/ultrastructure , Humans , Multiple Sclerosis/immunology , RNA-Directed DNA Polymerase/metabolism , Retroviridae Proteins/chemistry , Reverse Transcriptase Polymerase Chain Reaction , T-Lymphocytes/immunology , Virion/isolation & purification , Virus Activation
17.
Proc Natl Acad Sci U S A ; 101 Suppl 2: 14572-9, 2004 Oct 05.
Article in English | MEDLINE | ID: mdl-15310846

ABSTRACT

Retroelements constitute a large portion of our genomes. One class of these elements, the human endogenous retroviruses (HERVs), is comprised of remnants of ancient exogenous retroviruses that have gained access to the germ line. After integration, most proviruses have been the subject of numerous amplifications and have suffered extensive deletions and mutations. Nevertheless, HERV-derived transcripts and proteins have been detected in healthy and diseased human tissues, and HERV-K, the youngest, most conserved family, is able to form virus-like particles. Although it is generally accepted that the integration of retroelements can cause significant harm by disrupting or disregulating essential genes, the role of HERV expression in the etiology of malignancies and autoimmune and neurologic diseases remains controversial. In recent years, striking evidence has accumulated indicating that some proviral sequences and HERV proteins might even serve the needs of the host and are therefore under positive selection. The remarkable progress in the analysis of host genomes has brought to light the significant impact of HERVs and other retroelements on genetic variation, genome evolution, and gene regulation.


Subject(s)
Genome, Human , Retroelements , Antibodies, Viral/biosynthesis , Endogenous Retroviruses/genetics , Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/ultrastructure , Evolution, Molecular , Gene Expression , Humans , Microscopy, Electron , Proviruses/genetics , Proviruses/isolation & purification , Retroviridae Proteins/genetics , Retroviridae Proteins/immunology
18.
Proc Natl Acad Sci U S A ; 101(30): 11117-22, 2004 Jul 27.
Article in English | MEDLINE | ID: mdl-15263098

ABSTRACT

The sheep genome harbors approximately 20 copies of endogenous retroviruses (enJSRVs) closely related to the exogenous and oncogenic Jaagsiekte sheep retrovirus (JSRV). One of the enJSRV loci, enJS56A1, has a defect for viral exit. We report a previously uncharacterized mechanism of retroviral interference. The defect possessed by enJS56A1 is determined by its Gag protein and is transdominant over the exogenous JSRV. By electron microscopy, cells transfected by enJS56A1, with or without JSRV, show agglomerates of tightly packed intracellular particles most abundant in the perinuclear area. The defect in exit and ability to interfere with JSRV exit could be largely attributed to the presence of tryptophan, rather than arginine, at position 21 of enJS56A1 Gag; C98 and V102 also contribute to these properties. We found that enJS56A1 or similar loci containing W21, C98, and V102 are expressed in sheep endometrium. enJS56A1 is a previously unrecognized example of a naturally occurring endogenous retrovirus expressing a dominant negative Gag acting at a late step of the viral replication cycle. Understanding the late blockade exerted by enJS56A1 could unravel fundamental aspects of retroviral biology and help to devise new antiretroviral strategies.


Subject(s)
Endogenous Retroviruses/genetics , Gene Products, gag/genetics , Genes, gag/genetics , Animals , Base Sequence , Cell Line , Cloning, Molecular , DNA Primers , Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/ultrastructure , Gene Products, gag/chemistry , HeLa Cells , Humans , Kidney , Models, Molecular , Plasmids/genetics , Protein Conformation , RNA, Viral/genetics , Recombinant Proteins/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sheep/virology , Transfection
19.
Biologicals ; 31(4): 251-60, 2003 Dec.
Article in English | MEDLINE | ID: mdl-14624795

ABSTRACT

Rodent cells are used widely to manufacture recombinant proteins for pharmaceutical use in humans and animals. However, all rodent cell lines express endogenous retroviruses that require appropriate testing regimes for identification and characterisation. In this communication we report the results of transmission electron microscopy, reverse transcriptase assay and infectious virus assays for retrovirus in 185 manufacturer cell banks of mouse, rat or hamster origin. The results indicated considerable variability of retroviral expression levels by transmission electron microscopy and reverse transcriptase assay, but nevertheless characteristic features of each cell type were observed. Infectious retrovirus was detected in mouse myeloma and hybridoma cell lines, but not in cell lines of hamster or rat origin. There was no evidence of contamination of cell banks with exogenous retrovirus. The results of retroviral characterisation of the parental mouse cell lines NS0, NS-1 and Sp2/0Ag14 by the above assays were consistent with the results of the survey. Co-cultivation of the above parental mouse cell lines with mouse and human cell lines suggested that the ability to infect human cells was related to threshold susceptibility of cell types and the levels of expression of infectious xenotropic retrovirus by mouse cells.


Subject(s)
Biological Products/biosynthesis , Endogenous Retroviruses/isolation & purification , Animals , Cell Line , Cell Line, Tumor , Coculture Techniques , Cricetinae , Drug Contamination , Endogenous Retroviruses/enzymology , Endogenous Retroviruses/pathogenicity , Endogenous Retroviruses/ultrastructure , Humans , Hybridomas , Mice , Microscopy, Electron , RNA-Directed DNA Polymerase/analysis , Rats , Recombinant Proteins/biosynthesis
20.
J Virol Methods ; 108(1): 91-6, 2003 Mar.
Article in English | MEDLINE | ID: mdl-12565158

ABSTRACT

Murine myeloma and Chinese hamster ovary cells are used widely in the manufacture of recombinant proteins for biopharmaceuticals. However, rodent cell lines express endogenous retrovirus, which necessitates appropriate design of purification processes to remove virus in excess of the calculated maximum retroviral load. Currently, electron microscopy is the method of choice for determination of retroviral titre in bulk harvest. In this study we compared three electron microscopy techniques to determine retroviral titre in bulk harvest. These were direct negative stain, negative stain after sucrose-density purification and thin section electron microscopy of pelleted supernatant. The study demonstrated that the level of C-type retrovirus associated with cells was predictive of the viral load in cell culture supernatants. The most accurate method for quantifying viral load was direct counting, followed by thin section of pelleted supernatant and negative stain after sucrose concentration. The most practical method was thin section of resuspended pelleted supernatant, which gave improved detection limits.


Subject(s)
Endogenous Retroviruses/isolation & purification , Endogenous Retroviruses/ultrastructure , Microscopy, Electron/methods , Virology/methods , Animals , Biological Products/isolation & purification , CHO Cells , Cell Line , Centrifugation, Density Gradient , Cricetinae , Drug Contamination , Mice
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