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1.
Int J Biol Macromol ; 169: 1-7, 2021 Feb 01.
Article in English | MEDLINE | ID: mdl-33316339

ABSTRACT

Only a few known epoxide hydrolases (EHs) displayed activity towards o-nitrostyrene oxide (4a), presumably owing to the large steric hindrance caused by o-nitro substituent. Therefore, excavating EHs with high activity and enantio- and/or regio-selectivity towards racemic (rac-) 4a is essential but challenging. Here, AuEH2 from Aspergillus usamii was expressed in E. coli BL21(DE3). E. coli/Aueh2, an E. coli transformant expressing AuEH2, possessed EH activities of 16.2-184 U/g wet cell towards rac-styrene oxide (1a) and its derivatives (2a-13a), and the largest enantiomeric ratio of 96 towards rac-4a. The regioselectivity coefficients, ßR and ßS, of AuEH2 were determined to be 99.2% and 98.9%, suggesting that it regiopreferentially attacks the Cß in the oxirane rings of (R)- and (S)-4a. Then, the nearly perfect kinetic resolution of 20 mM rac-4a in pure water was carried out using 20 mg/mL wet cells of E. coli/Aueh2 at 25 °C for 50 min, retaining (S)-4a with over 99% ees and 48.9% yields, while producing (R)-o-nitrophenyl-1,2-ethanediol (4b) with 95.3% eep and 49.8% yieldp. To elucidate the molecular mechanism of AuEH2 with high enantiopreference for (R)-4a, its crystal structure was solved by X-ray diffraction and the molecular docking of AuEH2 with (R)- or (S)-4a was simulated.


Subject(s)
Epoxide Hydrolases/chemistry , Epoxide Hydrolases/isolation & purification , Epoxy Compounds/chemistry , Aspergillus/enzymology , Aspergillus/metabolism , Escherichia coli/metabolism , Hydrolysis , Kinetics , Molecular Docking Simulation , Oxides , Stereoisomerism
2.
Appl Microbiol Biotechnol ; 104(14): 6199-6210, 2020 Jul.
Article in English | MEDLINE | ID: mdl-32462245

ABSTRACT

In order to provide more alternative epoxide hydrolases for industrial production, a novel cDNA gene Rpeh-encoding epoxide hydrolase (RpEH) of Rhodotorula paludigena JNU001 identified by 26S rDNA sequence analysis was amplified by RT-PCR. The open-reading frame (ORF) of Rpeh was 1236 bp encoding RpEH of 411 amino acids and was heterologously expressed in Escherichia coli BL21(DE3). The substrate spectrum of expressed RpEH showed that the transformant E. coli/Rpeh had excellent enantioselectivity to 2a, 3a, and 5a-10a, among which E. coli/Rpeh had the highest activity (2473 U/g wet cells) and wonderful enantioselectivity (E = 101) for 8a, and its regioselectivity coefficients, αR and ßS, toward (R)- and (S)-8a were 99.7 and 83.2%, respectively. Using only 10 mg wet cells/mL of E. coli/Rpeh, the near-perfect kinetic resolution of rac-8a at a high concentration (1000 mM) was achieved within 2.5 h, giving (R)-8a with more than 99% enantiomeric excess (ees) and 46.7% yield and producing (S)-8b with 93.2% eep and 51.4% yield with high space-time yield (STY) for (R)-8a and (S)-8b were 30.6 and 37.3 g/L/h.


Subject(s)
Epoxide Hydrolases/metabolism , Epoxy Compounds/metabolism , Fungal Proteins/metabolism , Rhodotorula/enzymology , Amino Acid Sequence , Epoxide Hydrolases/genetics , Epoxide Hydrolases/isolation & purification , Epoxy Compounds/chemistry , Escherichia coli/genetics , Escherichia coli/metabolism , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Kinetics , Open Reading Frames , RNA, Ribosomal/genetics , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Rhodotorula/genetics , Stereoisomerism , Substrate Specificity
3.
Int J Biol Macromol ; 156: 225-232, 2020 Aug 01.
Article in English | MEDLINE | ID: mdl-32294502

ABSTRACT

To achieve the kinetic resolution and enantioconvergent hydrolysis of rac-1,2-epoxyhexane, the E value of PvEH2 was enhanced by substituting its partial cap-loop. Based on the experimental results reported previously and computer-aided analysis, the flexible and variable cap-loop, especially its middle segment, was speculated to be related to the catalytic properties of PvEH2. In view of this, four PvEH2's hybrids, Pv2St, Pv2Pv1, Pv2Vr1 and Pv2Vr2, were designed by substituting the middle segment (190EGMGSNLNTSMP201) of a cap-loop in PvEH2 with the corresponding ones in StEH, PvEH1, VrEH1 and VrEH2, respectively. Then, the hybrid-encoding genes, pv2st, pv2pv1, pv2vr1 and pv2vr2, were constructed by fusion PCR, and expressed in E. coli Rosetta(DE3). The expressed hybrid, Pv2St, displayed the highest specific activity of 35.3 U/mg protein towards rac-1,2-epoxyhexane. The corresponding transformant, E. coli/pv2st, exhibited the largest E value of 24.2, which was 11.5-fold that of E. coli/pveh2 expressing PvEH2. The scale-up kinetic resolution of 280 mM rac-1,2-epoxyhexane was carried out using 40 mg dry cells/mL of E. coli/pv2st at 25 °C for 4.5 h, retaining (S)-1,2-epoxyhexane with >99.5% ees and 36.9% yield. Additionally, the chemo-enzymatic enantioconvergent hydrolysis of rac-1,2-epoxyhexane using E. coli/pv2st followed by sulfuric acid produced (R)-hexane-1,2-diol with 73.0% eep and 86.5% yield.


Subject(s)
Epoxide Hydrolases/chemistry , Epoxy Compounds/chemistry , Phaseolus/enzymology , Amino Acid Sequence , Catalysis , Epoxide Hydrolases/genetics , Epoxide Hydrolases/isolation & purification , Hydrolysis , Kinetics , Models, Molecular , Molecular Conformation , Open Reading Frames , Phaseolus/genetics , Recombinant Proteins , Selection, Genetic
4.
J Zhejiang Univ Sci B ; 20(12): 995-1002, 2019.
Article in English | MEDLINE | ID: mdl-31749346

ABSTRACT

OBJECTIVE: This study aimed to clone and characterize the oxiranedicarboxylate hydrolase (ORCH) from Labrys sp. WH-1. METHODS: Purification by column chromatography, characterization of enzymatic properties, gene cloning by protein terminal sequencing and polymerase chain reaction (PCR), and sequence analysis by secondary structure prediction and multiple sequence alignment were performed. RESULTS: The ORCH from Labrys sp. WH-1 was purified 26-fold with a yield of 12.7%. It is a monomer with an isoelectric point (pI) of 8.57 and molecular mass of 30.2 kDa. It was stable up to 55 °C with temperature at which the activity of the enzyme decreased by 50% in 15 min (T5015) of 61 °C and the half-life at 50 °C (t1/2, 50 °C) of 51 min and was also stable from pH 4 to 10, with maximum activity at 55 °C and pH 8.5. It is a metal-independent enzyme and strongly inhibited by Cu2+, Ag+, and anionic surfactants. Its kinetic parameters (Km, kcat, and kcat/Km) were 18.7 mmol/L, 222.3 s-1, and 11.9 mmol/(L·s), respectively. The ORCH gene, which contained an open reading frame (ORF) of 825 bp encoding 274 amino acid residues, was overexpressed in Escherichia coli and the enzyme activity was 33 times higher than that of the wild strain. CONCLUSIONS: The catalytic efficiency and thermal stability of the ORCH from Labrys sp. WH-1 were the best among the reported ORCHs, and it provides an alternative catalyst for preparation of L(+)-2,3-dihydrobutanedioic acid.


Subject(s)
Alphaproteobacteria/enzymology , Epoxide Hydrolases/genetics , Cloning, Molecular , Dicarboxylic Acids/metabolism , Enzyme Stability , Epoxide Hydrolases/chemistry , Epoxide Hydrolases/isolation & purification , Epoxide Hydrolases/metabolism
5.
Protein Expr Purif ; 153: 105-113, 2019 01.
Article in English | MEDLINE | ID: mdl-30218745

ABSTRACT

The human soluble Epoxide Hydrolase (hsEH) is an enzyme involved in the hydrolysis of endogenous anti-inflammatory and cardio-protective signalling mediators known as epoxyeicosatrienoic acids (EETs). EETs' conversion into the corresponding diols by hsEH generates non-bioactive molecules, thereby the enzyme inhibition would be expected to enhance the EETs bioavailability, and their beneficial properties. Numerous inhibitors have been developed to target the enzyme, some of which are showing promising antihypertensive and anti-inflammatory properties in vivo. Thus far, the preparation of the recombinant enzyme for enzymatic and structural in vitro studies has been performed mainly using a baculovirus expression system. More recently, it was reported that the enzyme could be exogenously expressed and isolated from E. coli, although limited amounts of active protein were obtained. We herein describe two novel methods to yield pure recombinant enzyme. The first describes the expression and purification of the full-length enzyme from eukaryotic cells HEK293-F, whilst the second concerns the C-terminal domain of hsEH obtained from the cost-effective and rapid E. coli prokaryotic system. The two methods successfully generated satisfactory amounts of functional enzyme, with virtually identical enzymatic activity. Overall, the protocols described in this paper can be employed for the recombinant expression and purification of active hsEH, to be used in future biomedical investigations and for high-throughput screening of inhibitors for potential use in the treatment of cardiovascular disease.


Subject(s)
8,11,14-Eicosatrienoic Acid/analogs & derivatives , Cloning, Molecular/methods , Epoxide Hydrolases/genetics , Chromatography, Affinity , Enzyme Assays , Epoxide Hydrolases/chemistry , Epoxide Hydrolases/isolation & purification , Epoxide Hydrolases/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , HEK293 Cells , Humans , Hydrolysis , Protein Domains , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Solubility , Spectrometry, Mass, Electrospray Ionization
6.
Mol Biol (Mosk) ; 51(3): 442-446, 2017.
Article in Russian | MEDLINE | ID: mdl-28707660

ABSTRACT

The concentration of soluble epoxide hydrolase (sEH) protein was studied in renal medulla of adult rats from hypertensive ISIAH strain and normotensive WAG strain. The sEH is a key enzyme in metabolism of epoxyeicosatrienoic acids capable of activating endothelial NO-synthase and nitrogen oxide formation, and therefore being vasodilators. An increase in the sEH protein concentration (that we found) allows one to assume that the oxidative stress is increased in the renal medulla of hypertensive rats, and the bloodflow is decreased.


Subject(s)
Epoxide Hydrolases/biosynthesis , Oxidative Stress/genetics , Stress, Physiological/genetics , Animals , Blood Pressure , Disease Models, Animal , Epoxide Hydrolases/isolation & purification , Humans , Hypertension/enzymology , Hypertension/pathology , Kidney Medulla/enzymology , Kidney Medulla/pathology , Male , Nitric Oxide Synthase/genetics , Nitrogen Oxides/metabolism , Rats
7.
Future Microbiol ; 12: 527-546, 2017 05.
Article in English | MEDLINE | ID: mdl-28492351

ABSTRACT

AIM: mesT of Mycobacterium tuberculosis, a hypothetical/putative epoxide hydrolase, is predicted to convert toxic epoxides to the more water-soluble and less toxic diols. Detailed characterization of the protein was carried out. RESULTS: mesT demonstrated esterase as well as epoxide hydrolase activity. It was membrane bound and was upregulated under hypoxic conditions. The enzyme was able to degrade styrene oxide. The presence of antisense against this gene resulted in the inhibition of in vitro bacterial growth/survival in the presence of styrene oxide. Conclusion & future perspective: We demonstrated that mesT possessed epoxide hydrolase activity and styrene oxide might be its physiological substrate. Inhibition of mesT reduced the growth of the bacteria in presence of styrene oxide and its expression under hypoxic condition suggested its role in intracellular survival of bacteria.


Subject(s)
Epoxide Hydrolases/chemistry , Epoxide Hydrolases/metabolism , Epoxy Compounds/pharmacology , Mycobacterium tuberculosis/enzymology , Mycobacterium tuberculosis/growth & development , Epoxide Hydrolases/genetics , Epoxide Hydrolases/isolation & purification , Epoxy Compounds/metabolism , Escherichia coli/genetics , Esterases/metabolism , Hypoxia , Kinetics , Microbial Viability/genetics , Mycobacterium tuberculosis/drug effects , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Substrate Specificity , Up-Regulation
8.
Int J Biol Macromol ; 89: 569-74, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27177457

ABSTRACT

Epoxide hydrolases (EHs) are enzymes that are present in all living organisms and catalyze the hydrolysis of epoxides to the corresponding vicinal diols. EHs have biotechnological potential in chiral chemistry. We report the cloning, purification, enzymatic activity, and conformational analysis of the TrEH gene from Trichoderma reesei strain QM9414 using circular dichroism spectroscopy. The EH gene has an open reading frame encoding a protein of 343 amino acid residues, resulting in a molecular mass of 38.2kDa. The enzyme presents an optimum pH of 7.2, and it is highly active at temperatures ranging from 23 to 50°C and thermally inactivated at 70°C (t1/2=7.4min). The Michaelis constants (Km) were 4.6mM for racemic substrate, 21.7mM for (R)-(+)-styrene oxide and 3.0mM for (S)-(-)-styrene oxide. The kcat/Km analysis indicated that TrEH is enantioselective and preferentially hydrolyzes (S)-(-)-styrene oxide. The conformational stability studies suggested that, despite the extreme conditions (high temperatures and extremely acid and basic pHs), TrEH is able to maintain a considerable part of its regular structures, including the preservation of the native cores in some cases. The recombinant protein showed enantioselectivity that was distinct from other fungus EHs, making this protein a potential biotechnological tool.


Subject(s)
Epoxide Hydrolases/chemistry , Recombinant Proteins/chemistry , Trichoderma/enzymology , Amino Acid Sequence/genetics , Cloning, Molecular , Epoxide Hydrolases/genetics , Epoxide Hydrolases/isolation & purification , Epoxy Compounds/chemistry , Escherichia coli/genetics , Hydrolysis , Recombinant Proteins/genetics , Substrate Specificity
9.
Biochim Biophys Acta ; 1841(7): 954-62, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24681163

ABSTRACT

Soluble epoxide hydrolase (sEH) contributes to cell growth, but the contribution of sEH to embryonic development is not well understood. In this study, Xenopus sEH cDNA was isolated from embryos of Xenopus laevis. The Xenopus sEH was expressed in Escherichia coli and was purified. The epoxide hydrolase and phosphatase activities of purified sEH were investigated. The Xenopus sEH did not show phosphatase activity toward 4-methylumbelliferyl phosphate or several lysophosphatidic acids although it had EH activity. The amino acid sequence of Xenopus sEH was compared with that reported previously. We found amino acid substitutions of the 29th Thr to Asn and the 146th Arg to His and prepared a sEH mutant (N29T/H146R), designed as mutant 1. Neither wild-type sEH nor mutant 1 had phosphatase activity. Additional substitution of the 11th Gly with Asp was found by comparison with human sEH which has phosphatase activity, but the Xenopus sEH mutant G11D prepared as mutant 2 did not have phosphatase activity. The epoxide hydrolase activity of sEH seemed to be similar to that of human sEH, while Xenopus sEH did not have phosphatase activity toward several substrates that human sEH metabolizes.


Subject(s)
Amphibian Proteins/metabolism , Epoxide Hydrolases/metabolism , Xenopus laevis/metabolism , Amino Acid Sequence , Amino Acid Substitution , Amphibian Proteins/genetics , Amphibian Proteins/isolation & purification , Animals , Cloning, Molecular , DNA, Complementary/genetics , DNA, Complementary/metabolism , Embryo, Nonmammalian , Epoxide Hydrolases/genetics , Epoxide Hydrolases/isolation & purification , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Hymecromone/analogs & derivatives , Kinetics , Lysophospholipids , Molecular Sequence Data , Mutation , Phosphoric Monoester Hydrolases/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Solubility , Species Specificity , Substrate Specificity , Xenopus laevis/embryology , Xenopus laevis/genetics
10.
Appl Microbiol Biotechnol ; 98(1): 207-18, 2014 Jan.
Article in English | MEDLINE | ID: mdl-23615737

ABSTRACT

Two native epoxide hydrolases (EHs) were previously discovered from mung bean powder (Vigna radiata), both of which can catalyze the enantioconvergent hydrolysis of p-nitrostyrene oxide (pNSO). In this study, the encoding gene of VrEH1 was successfully cloned from the cDNA of V. radiata by RT-PCR and rapid amplification of cDNA ends (RACE) technologies. High homologies were found to two putative EHs originated from Glycine max (80%) and Medicago truncatula (79%). The vreh1 gene constructed in pET28a(+) vector was then heterologously overexpressed in Escherichia coli BL21(DE3), and the encoded protein was purified to homogeneity by nickel affinity chromatography. It was shown that VrEH1 has an optimum activity at 45 °C and is very thermostable with an inactivation energy of 468 kJ mol(-1). The enzyme has no apparent requirement of metal ions for activity, and its activity was strongly inhibited by 1 mM of Ni(2+), Cu(2+), Fe(2+), or Co(2+). By adding 0.1% Triton X-100, the enzyme activity could be significantly increased up to 340%. VrEH1 shows an unusual ability of enantioconvergent catalysis for the hydrolysis of racemic pNSO, affording (R)-p-nitrophenyl glycol (pNPG). It displays opposite regioselectivity toward (S)-pNSO (83% to Cα) in contrast to (R)-pNSO (87% to Cß). The K M and k cat of VrEH1 were determined to be 1.4 mM and 0.42 s(-1) for (R)-pNSO and 5.5 mM and 6.2 s(-1) for (S)-pNSO. This thermostable recombinant VrEH1 with enantioconvergency is considered to be a promising biocatalyst for the highly productive preparation of enantiopure vicinal diols and also a good model for understanding the mechanism of EH stereoselectivity.


Subject(s)
Epoxide Hydrolases/metabolism , Epoxy Compounds/metabolism , Fabaceae/enzymology , Chromatography, Affinity , Enzyme Activators/metabolism , Enzyme Inhibitors/metabolism , Enzyme Stability , Epoxide Hydrolases/chemistry , Epoxide Hydrolases/genetics , Epoxide Hydrolases/isolation & purification , Escherichia coli/genetics , Fabaceae/genetics , Gene Expression , Glycols/metabolism , Hydrolysis , Molecular Sequence Data , Nitrobenzenes/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Temperature
11.
Protein Expr Purif ; 91(2): 175-83, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23973866

ABSTRACT

A novel epoxide hydrolase from Aspergillus brasiliensis CCT1435 (AbEH) was cloned and overexpressed in Escherichia coli cells with a 6xHis-tag and purified by nickel affinity chromatography. Gel filtration analysis and circular dichroism measurements indicated that this novel AbEH is a homodimer in aqueous solution and contains the typical secondary structure of an α/ß hydrolase fold. The activity of AbEH was initially assessed using the fluorogenic probe O-(3,4-epoxybutyl) umbelliferone and was active in a broad range of pH (6-9) and temperature (25-45°C); showing optimum performance at pH 6.0 and 30°C. The Michaelis constant (KM) and maximum rate (Vmax) values were 495µM and 0.24µM/s, respectively. Racemic styrene oxide (SO) was used as a substrate to assess the AbEH activity and enantioselectivity, and 66% of the SO was hydrolyzed after only 5min of reaction, with the remaining (S)-SO ee exceeding 99% in a typical kinetic resolution behavior. The AbEH-catalyzed hydrolysis of SO was also evaluated in a biphasic system of water:isooctane; (R)-diol in 84% ee and unreacted (S)-SO in 36% ee were produced, with 43% conversion in 24h, indicating a discrete enantioconvergent behavior for AbEH. This novel epoxide hydrolase has biotechnological potential for the preparation of enantiopure epoxides or vicinal diols.


Subject(s)
Aspergillus/enzymology , Epoxide Hydrolases/chemistry , Fungal Proteins/chemistry , Recombinant Fusion Proteins/chemistry , Amino Acid Sequence , Aspergillus/genetics , Chromatography, Affinity , Circular Dichroism , Epoxide Hydrolases/genetics , Epoxide Hydrolases/isolation & purification , Epoxide Hydrolases/metabolism , Epoxy Compounds/chemistry , Escherichia coli/genetics , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Fungal Proteins/metabolism , Histidine/genetics , Hydrolysis , Molecular Sequence Data , Oligopeptides/genetics , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/isolation & purification , Recombinant Fusion Proteins/metabolism , Sequence Alignment , Stereoisomerism
12.
Phytochemistry ; 90: 6-15, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23562372

ABSTRACT

Plant epoxide hydrolases (EH) form two major clades, named EH1 and EH2. To gain a better understanding of the biochemical roles of the two classes, NbEH1.1 and NbEH2.1 were isolated from Nicotiana benthamiana and StEH from potato and heterologously expressed in Escherichia coli. The purified recombinant proteins were assayed with a variety of substrates. NbEH1.1 only accepted some aromatic epoxides, and displayed the highest enzyme activity towards phenyl glycidyl ether. In contrast, NbEH2.1 displayed a broad substrate range and similar substrate specificity as StEH. The latter enzymes showed activity towards all fatty acid epoxides examined. The activity (Vmax) of NbEH1.1 towards phenyl glycidyl ether was 10 times higher than that of NbEH2.1. On the contrary, NbEH2.1 converted cis-9,10-epoxystearic acid with Vmax of 3.83µmolminmg(-1) but NbEH1.1 could not hydrolyze cis-9,10-epoxystearic acid. Expression analysis revealed that NbEH1.1 is induced by infection with tobacco mosaic virus (TMV) and wounding, whereas NbEH2.1 is present at a relatively constant level, not influenced by treatment with TMV and wounding. NbEH1.1 transcripts were present predominantly in roots, whereas NbEH2.1 mRNAs were detected primarily in leaves and stems. Overall, these two types of tobacco EH enzymes are distinguished not only by their gene expression, but also by different substrate specificities. EH1 seems not to participate in cutin biosynthesis and it may play a role in generating signals for activation of certain defence and stress responses in tobacco. However, members of the EH2 group hydrate fatty acid epoxides and may be involved in cutin monomer production in plants.


Subject(s)
Epoxide Hydrolases/metabolism , Nicotiana/enzymology , Plant Proteins/metabolism , Enzyme Activation , Epoxide Hydrolases/chemistry , Epoxide Hydrolases/isolation & purification , Plant Proteins/chemistry , Plant Proteins/isolation & purification , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism
13.
Insect Biochem Mol Biol ; 43(3): 219-28, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23276675

ABSTRACT

Epoxide hydrolases (EHs) are α/ß-hydrolase fold superfamily enzymes that convert epoxides to 1,2-trans diols. In insects EHs play critical roles in the metabolism of toxic compounds and allelochemicals found in the diet and for the regulation of endogenous juvenile hormones (JHs). In this study we obtained a full-length cDNA, hvmeh1, from the generalist feeder Heliothis virescens that encoded a highly active EH, Hv-mEH1. Of the 10 different EH substrates that were tested, Hv-mEH1 showed the highest specific activity (1180 nmol min(-1) mg(-1)) for a 1,2-disubstituted epoxide-containing fluorescent substrate. This specific activity was more than 25- and 3900-fold higher than that for the general EH substrates cis-stilbene oxide and trans-stilbene oxide, respectively. Although phylogenetic analysis placed Hv-mEH1 in a clade with some lepidopteran JH metabolizing EHs (JHEHs), JH III was a relatively poor substrate for Hv-mEH1. Hv-mEH1 showed a unique substrate selectivity profile for the substrates tested in comparison to those of MsJHEH, a well-characterized JHEH from Manduca sexta, and hmEH, a human microsomal EH. Hv-mEH1 also showed unique enzyme inhibition profiles to JH-like urea, JH-like secondary amide, JH-like primary amide, and non-JH-like primary amide compounds in comparison to MsJHEH and hmEH. Although Hv-mEH1 is capable of metabolizing JH III, our findings suggest that this enzymatic activity does not play a significant role in the metabolism of JH in the caterpillar. The ability of Hv-mEH1 to rapidly hydrolyze 1,2-disubstituted epoxides suggests that it may play roles in the metabolism of fatty acid epoxides such as those that are commonly found in the diet of Heliothis.


Subject(s)
Epoxide Hydrolases/metabolism , Insect Proteins/metabolism , Moths/enzymology , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , Epoxide Hydrolases/isolation & purification , Humans , Insect Proteins/isolation & purification , Juvenile Hormones/metabolism , Larva/enzymology , Molecular Sequence Data , Radioligand Assay , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Sequence Analysis, DNA , Sequence Homology, Amino Acid
14.
J Biotechnol ; 162(2-3): 183-90, 2012 Dec 31.
Article in English | MEDLINE | ID: mdl-22995740

ABSTRACT

A comparative study was made of Mung bean epoxide hydrolases-catalyzed asymmetric hydrolysis of styrene oxide to (R)-1-phenyl-1,2-ethanediol in an n-hexane/buffer biphasic system containing various hydrophilic ionic liquids (ILs). Compared to the n-hexane/buffer biphasic system alone, addition of a small amount of hydrophilic ILs reduced the amount of non-enzymatic hydrolysis, and improved the reaction rate by up to 22%. The ILs with cation containing an alkanol group, namely [C(2)OHMIM][BF(4)] and [C(2)OHMIM][TfO], and the choline amino acid ILs [Ch][Arg] and [Ch][Pro] were found to be the most suitable co-solvents for the reaction, owing to their good biocompatibility with the enzyme, which led to high initial rates (0.99-1.25 µmol/min) and high product e.e.s (95%). When substrate concentration was around 30 mM, where optimal performance was observed with the IL-containing systems, the product e.e. was improved from 90% without ILs to ≥95% in the presence of ILs.


Subject(s)
Epoxide Hydrolases/chemistry , Epoxy Compounds/chemistry , Fabaceae/enzymology , Ionic Liquids/chemistry , Biotechnology , Epoxide Hydrolases/isolation & purification , Epoxide Hydrolases/metabolism , Epoxy Compounds/metabolism , Fabaceae/chemistry , Hydrogen-Ion Concentration , Hydrolysis/drug effects , Hydrophobic and Hydrophilic Interactions , Imidazoles/chemistry , Imidazoles/pharmacology , Ionic Liquids/pharmacology , Temperature
15.
Protein J ; 31(5): 432-8, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22592448

ABSTRACT

The cis-epoxysuccinate hydrolases (CESHs), members of epoxide hydrolase, catalyze cis-epoxysuccinic acid hydrolysis to form D: (-)-tartaric acid or L: (+)-tartaric acid which are important chemicals with broad scientific and industrial applications. Two types of CESHs (CESH[D: ] and CESH[L: ], producing D: (-)- and L: (+)-tartaric acids, respectively) have been reported with low yield and complicated purification procedure in previous studies. In this paper, the two CESHs were overexpressed in Escherichia coli using codon-optimized genes. High protein yields by one-step purifications were obtained for both recombinant enzymes. The optimal pH and temperature were measured for both recombinant CESHs, and the properties of recombinant enzymes were similar to native enzymes. Kinetics parameters measured by Lineweaver-Burk plot indicates both enzymes exhibited similar affinity to cis-epoxysuccinic acid, but CESH[L: ] showed much higher catalytic efficiency than CESH[D: ], suggesting that the two CESHs have different catalytic mechanisms. The structures of both CESHs constructed by homology modeling indicated that CESH[L: ] and CESH[D: ] have different structural folds and potential active site residues. CESH[L: ] adopted a typical α/ß-hydrolase fold with a cap domain and a core domain, whereas CESH[D: ] possessed a unique TIM barrel fold composed of 8 α-helices and 8 ß-strands, and 2 extra short α-helices exist on the top and bottom of the barrel, respectively. A divalent metal ion, preferred to be zinc, was found in CESH[D: ], and the ion was proved to be crucial to the enzymatic activity. These results provide structural insight into the different catalytic mechanisms of the two CESHs.


Subject(s)
Bordetella/enzymology , Cloning, Molecular , Epoxide Hydrolases/genetics , Epoxide Hydrolases/metabolism , Rhodococcus/enzymology , Succinic Acid/metabolism , Bordetella/chemistry , Bordetella/genetics , Cloning, Molecular/methods , Epoxide Hydrolases/chemistry , Epoxide Hydrolases/isolation & purification , Epoxy Compounds/chemistry , Epoxy Compounds/metabolism , Escherichia coli/genetics , Models, Molecular , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Rhodococcus/chemistry , Rhodococcus/genetics , Structural Homology, Protein , Substrate Specificity , Succinic Acid/chemistry , Tartrates/metabolism
16.
Chem Commun (Camb) ; 47(28): 8115-7, 2011 Jul 28.
Article in English | MEDLINE | ID: mdl-21687876

ABSTRACT

Ni-NTA functionalized iron oxide magnetic nanoparticle was synthesized and used to selectively immobilize a his-tagged enzyme from cell free extract as an active and recyclable nanobiocatalyst, where purification and immobilization of the target enzyme were accomplished in one pot.


Subject(s)
Biocatalysis , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Magnetics , Nanoparticles/chemistry , Nickel/chemistry , Nitrilotriacetic Acid/chemistry , Enzymes, Immobilized/isolation & purification , Epoxide Hydrolases/chemistry , Epoxide Hydrolases/isolation & purification , Epoxide Hydrolases/metabolism , Models, Molecular , Protein Conformation , Solanum tuberosum/enzymology
17.
Chembiochem ; 12(10): 1529-35, 2011 Jul 04.
Article in English | MEDLINE | ID: mdl-21567703

ABSTRACT

We describe here a strategy to improve the expression efficiency and enantioselectivity of Aspergillus niger epoxide hydrolase (ANEH) by directed evolution. Based on a blue-colony screening system using the LacZα (ß-galactosidase α peptide) complementation solubility reporter, several ANEH variants out of 15 000 transformants from a random-mutagenesis library were identified that show improved recombinant expression in E. coli. Among them, Pro221Ser was subsequently used as a template for iterative saturation mutagenesis (ISM) at sites around the ANEH binding pocket. Following four rounds of ISM, a highly enantioselective mutant was identified that catalyzes the hydrolytic kinetic resolution of racemic glycidyl phenyl ether with a selectivity factor of E=160 in favor of the (S)-diol compared to WT ANEH characterized by E=4.6. Expression of this mutant is 50 times higher than that of WT ANEH. It also serves as an excellent stereoselective catalyst in the hydrolytic kinetic resolution and desymmetrization of several other structurally diverse epoxides.


Subject(s)
Aspergillus niger/enzymology , Directed Molecular Evolution/methods , Epoxide Hydrolases/genetics , Aspergillus niger/genetics , Epoxide Hydrolases/isolation & purification , Epoxide Hydrolases/metabolism , Escherichia coli/genetics , Gene Expression , Models, Molecular , Mutation , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Stereoisomerism , Substrate Specificity , beta-Galactosidase/metabolism
18.
Protein Expr Purif ; 79(1): 49-59, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21515382

ABSTRACT

A putative epoxide hydrolase-encoding gene was identified from the genome sequence of Cupriavidus metallidurans CH34. The gene was cloned and overexpressed in Escherichia coli with His(6)-tag at its N-terminus. The epoxide hydrolase (CMEH) was purified to near homogeneity and was found to be a homodimer, with subunit molecular weight of 36 kDa. The CMEH had broad substrate specificity as it could hydrolyze 13 epoxides, out of 15 substrates tested. CMEH had high specific activity with 1,2-epoxyoctane, 1,2-epoxyhexane, styrene oxide (SO) and was also found to be active with meso-epoxides. The enzyme had optimum pH and temperature of 7.5 and 37°C respectively, with racemic SO. Biotransformation of 80 mM SO with recombinant whole E. coli cells expressing CMEH led to 56% ee(P) of (R)-diol with 77.23% conversion in 30 min. The enzyme could hydrolyze (R)-SO, ∼2-fold faster than (S)-SO, though it accepted both (R)- and (S)-SO with similar affinity as K(m)(R) and K(m)(S) of CMEH were 2.05±0.42 and 2.11±0.16 mM, respectively. However, the k(cat)(R) and k(cat)(S) for the two enantiomers of SO were 4.80 and 3.34 s(-1), respectively. The wide substrate spectrum exhibited by CMEH combined with the fast conversion rate makes it a robust biocatalyst for industrial use. Regioselectivity studies with enantiopure (R)- and (S)-SO revealed that with slightly altered regioselectivity, CMEH has a high potential to synthesize an enantiopure (R)-PED, through an enantioconvergent hydrolytic process.


Subject(s)
Cupriavidus/enzymology , Epoxide Hydrolases/genetics , Epoxide Hydrolases/metabolism , Amino Acid Sequence , Cloning, Molecular , Cupriavidus/genetics , Epoxide Hydrolases/isolation & purification , Epoxy Compounds/metabolism , Escherichia coli/genetics , Gene Expression , Molecular Sequence Data , Octanes/metabolism , Sequence Alignment , Substrate Specificity
19.
Biotechnol J ; 6(4): 463-9, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21381205

ABSTRACT

An extraction/immobilization method for HIs(6) -tagged enzymes for use in synthesis applications is presented. By modifying silica oxide beads to be able to accommodate metal ions, the enzyme was tethered to the beads after adsorption of Co(II). The beads were successfully used for direct extraction of C. antarctica lipase B (CalB) from a periplasmic preparation with a minimum of 58% activity yield, creating a quick one-step extraction-immobilization protocol. This method, named HisSi Immobilization, was evaluated with five different enzymes [Candida antarctica lipase B (CalB), Bacillus subtilis lipase A (BslA), Bacillus subtilis esterase (BS2), Pseudomonas fluorescence esterase (PFE), and Solanum tuberosum epoxide hydrolase 1 (StEH1)]. Immobilized CalB was effectively employed in organic solvent (cyclohexane and acetonitrile) in a transacylation reaction and in aqueous buffer for ester hydrolysis. For the remaining enzymes some activity in organic solvent could be shown, whereas the non-immobilized enzymes were found inactive. The protocol presented in this work provides a facile immobilization method by utilization of the common His(6) -tag, offering specific and defined means of binding a protein in a specific location, which is applicable for a wide range of enzymes.


Subject(s)
Enzymes, Immobilized/chemistry , Enzymes, Immobilized/isolation & purification , Bacterial Proteins/chemistry , Bacterial Proteins/isolation & purification , Epoxide Hydrolases/chemistry , Epoxide Hydrolases/isolation & purification , Fungal Proteins , Lipase/chemistry , Lipase/isolation & purification , Plant Proteins/chemistry , Plant Proteins/isolation & purification
20.
Science ; 330(6000): 90-4, 2010 Oct 01.
Article in English | MEDLINE | ID: mdl-20813919

ABSTRACT

Leukotriene A(4) hydrolase (LTA(4)H) is a proinflammatory enzyme that generates the inflammatory mediator leukotriene B(4) (LTB(4)). LTA(4)H also possesses aminopeptidase activity with unknown substrate and physiological importance; we identified the neutrophil chemoattractant proline-glycine-proline (PGP) as this physiological substrate. PGP is a biomarker for chronic obstructive pulmonary disease (COPD) and is implicated in neutrophil persistence in the lung. In acute neutrophil-driven inflammation, PGP was degraded by LTA(4)H, which facilitated the resolution of inflammation. In contrast, cigarette smoke, a major risk factor for the development of COPD, selectively inhibited LTA(4)H aminopeptidase activity, which led to the accumulation of PGP and neutrophils. These studies imply that therapeutic strategies inhibiting LTA(4)H to prevent LTB(4) generation may not reduce neutrophil recruitment because of elevated levels of PGP.


Subject(s)
Epoxide Hydrolases/metabolism , Lung/immunology , Neutrophils/physiology , Oligopeptides/metabolism , Pneumonia/immunology , Proline/analogs & derivatives , Smoke , Acetylation , Animals , Bronchoalveolar Lavage Fluid/chemistry , Cells, Cultured , Chemokines, CXC/metabolism , Chemotaxis, Leukocyte , Epoxide Hydrolases/antagonists & inhibitors , Epoxide Hydrolases/isolation & purification , Female , Humans , Inflammation , Leukotriene B4/metabolism , Lung/metabolism , Lung/pathology , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Neutrophils/enzymology , Neutrophils/immunology , Orthomyxoviridae Infections/immunology , Orthomyxoviridae Infections/metabolism , Orthomyxoviridae Infections/pathology , Pneumococcal Infections/immunology , Pneumococcal Infections/metabolism , Pneumococcal Infections/pathology , Pneumonia/metabolism , Pneumonia/pathology , Pneumonia/therapy , Proline/metabolism , Pulmonary Disease, Chronic Obstructive/immunology , Pulmonary Disease, Chronic Obstructive/metabolism , Pulmonary Disease, Chronic Obstructive/pathology , Nicotiana
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