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1.
ISME J ; 18(1)2024 Jan 08.
Article in English | MEDLINE | ID: mdl-38690786

ABSTRACT

Bacterial persistence in the rhizosphere and colonization of root niches are critical for the establishment of many beneficial plant-bacteria interactions including those between Rhizobium leguminosarum and its host legumes. Despite this, most studies on R. leguminosarum have focused on its symbiotic lifestyle as an endosymbiont in root nodules. Here, we use random barcode transposon sequencing to assay gene contributions of R. leguminosarum during competitive growth in the rhizosphere and colonization of various plant species. This facilitated the identification of 189 genes commonly required for growth in diverse plant rhizospheres, mutation of 111 of which also affected subsequent root colonization (rhizosphere progressive), and a further 119 genes necessary for colonization. Common determinants reveal a need to synthesize essential compounds (amino acids, ribonucleotides, and cofactors), adapt metabolic function, respond to external stimuli, and withstand various stresses (such as changes in osmolarity). Additionally, chemotaxis and flagella-mediated motility are prerequisites for root colonization. Many genes showed plant-specific dependencies highlighting significant adaptation to different plant species. This work provides a greater understanding of factors promoting rhizosphere fitness and root colonization in plant-beneficial bacteria, facilitating their exploitation for agricultural benefit.


Subject(s)
Plant Roots , Rhizobium leguminosarum , Rhizosphere , Symbiosis , Plant Roots/microbiology , Rhizobium leguminosarum/genetics , Rhizobium leguminosarum/growth & development , Rhizobium leguminosarum/physiology , Fabaceae/microbiology , Fabaceae/growth & development , Soil Microbiology
2.
Sci Rep ; 14(1): 11139, 2024 05 15.
Article in English | MEDLINE | ID: mdl-38750151

ABSTRACT

Fertilizers application are widely used to get a higher yield in agricultural fields. Nutrient management can be improved by cultivating leguminous species in order to obtain a better understanding of the mechanisms that increase the amount of available phosphorus (P) and potassium (K) through fertilizer treatments. A pot experiment was conducted to identify the leguminous species (i.e., chickpea and pea) under various fertilizer treatments. Experimental design is as follows: T0 (control: no fertilizer was applied), T1: P applied at the level of (90 kg ha-1), T2: (K applied at the level of 90 kg ha-1), and T3: (PK applied both at 90 kg ha-1). All fertilizer treatments significantly (p < 0.05) improved the nutrient accumulation abilities and enzymes activities. The T3 treatment showed highest N uptake in chickpea was 37.0%, compared to T0. While T3 developed greater N uptake in pea by 151.4% than the control. However, T3 treatment also increased microbial biomass phosphorus in both species i.e., 95.7% and 81.5% in chickpeas and peas, respectively, compared to T0 treatment. In chickpeas, T1 treatment stimulated NAGase activities by 52.4%, and T2 developed URase activities by 50.1% higher than control. In contrast, T3 treatment enhanced both BGase and Phase enzyme activities, i.e., 55.8% and 33.9%, respectively, compared to the T0 treatment. Only the T3 treatment improved the activities of enzymes in the pea species (i.e., BGase was 149.7%, URase was 111.9%, Phase was 81.1%, and NAGase was 70.0%) compared to the control. Therefore, adding combined P and K fertilizer applications to the soil can increase the activity of enzymes in both legume species, and changes in microbial biomass P and soil nutrient availability make it easier for plants to uptake the nutrients.


Subject(s)
Biomass , Cicer , Fertilizers , Phosphorus , Soil Microbiology , Soil , Phosphorus/metabolism , Soil/chemistry , Cicer/metabolism , Cicer/growth & development , Fabaceae/metabolism , Fabaceae/growth & development , Potassium/metabolism , Pisum sativum/metabolism , Pisum sativum/growth & development , Nitrogen/metabolism , Nutrients/metabolism
3.
Chemosphere ; 356: 141767, 2024 May.
Article in English | MEDLINE | ID: mdl-38537715

ABSTRACT

The current review highlights the complex behavior of thallium (Tl) in soil and plant systems, offering insight into its hazardous characteristics and far-reaching implications. The research investigates the many sources of Tl, from its natural existence in the earth crust to its increased release through anthropogenic activities such as industrial operations and mining. Soil emerges as a significant reservoir of Tl, with diverse physicochemical variables influencing bioavailability and entrance into the food chain, notably in Brassicaceae family members. Additionally, the study highlights a critical knowledge gap concerning Tl influence on legumes (e.g., soybean), underlining the pressing demand for additional studies in this crucial sector. Despite the importance of leguminous crops in the world food supply and soil fertility, the possible impacts of Tl on these crops have received little attention. As we traverse the ecological complexity of Tl, this review advocates the collaborative research efforts to eliminate crucial gaps and provide solutions for reducing Tl detrimental impacts on soil and plant systems. This effort intends to pave the path for sustainable agricultural practices by emphasizing the creation of Tl-tolerant legume varieties and revealing the complicated dynamics of Tl-plant interactions, assuring the long-term durability of our food systems against the danger of Tl toxicity.


Subject(s)
Soil Pollutants , Soil , Thallium , Thallium/analysis , Soil/chemistry , Soil Pollutants/analysis , Soil Pollutants/metabolism , Crops, Agricultural/metabolism , Agriculture , Plants/metabolism , Environmental Monitoring , Fabaceae/metabolism , Fabaceae/growth & development
5.
Arq. Ciênc. Vet. Zool. UNIPAR (Online) ; 26(1cont): 313-323, jan.-jun. 2023. ilus, tab
Article in Portuguese | LILACS, VETINDEX | ID: biblio-1517897

ABSTRACT

O presente estudo teve como objetivo avaliar e desenvolver uma nova tecnologia para agricultura familiar, que integre a olericultura com a criação de pintados em tanques elevados de geomembrana com recirculação de água. Para tanto, foram distribuídos aleatoriamente 240 peixes com peso médio de 10,67g em um tanque de geomembrana com capacidade de 30 m3 de água. A qualidade da água foi monitorada analisando as variáveis temperatura da água por meio de um termômetro, oxigênio dissolvido, pH, alcalinidade, nitrito e amônia por meio de kits colorimétricos. O arraçoamento foi realizado duas vezes ao dia às 07h00min e 19h00min com ração extrusada contendo 32% de proteína bruta, durante um período de 204 dias. Mensalmente foram realizadas biometrias para corrigir o arraçoamento, analisar o peso total médio, comprimento total médio, ganho de peso e conversão alimentar. A qualidade da água durante o período experimental não apresentou níveis críticos para a produção dos peixes e no final dos 204 dias de criação os peixes apresentaram peso final médio de 719,4g, comprimento final médio de 48,5cm, ganho de peso final médio de 708,5g e conversão alimentar média de 1,59. Quanto à produtividade das olerícolas, constatou-se que a água do efluente do sistema de criação forneceu quantidades adequadas de nutrientes necessários ao desenvolvimento das plantas. Os resultados indicam que o pintado tem potencial para ser criado em tanques elevados de geomembrana com sistema de recirculação de água e o efluente do sistema pode ser utilizado como uma alternativa para a produção integrada de peixes e olerícolas.(AU)


The present study aimed to evaluate and develop a new technology for family farming, which integrates vegetable farming with the creation of guinea fowl in elevated geomembrane tanks with water recirculation. To this end, 240 fish with an average weight of 10.67g were randomly distributed in a geomembrane tank with a capacity of 30 m3 of water. Water quality was monitored by analyzing the variables water temperature using a thermometer, dissolved oxygen, pH, alkalinity, nitrite and ammonia using colorimetric kits. Feeding was carried out twice a day at 7:00 am and 7:00 pm with extruded feed containing 32% crude protein, over a period of 204 days. Biometrics were carried out monthly to correct the diet, analyze the average total weight, average total length, weight gain and feed conversion. The water quality during the experimental period did not present critical levels for fish production and at the end of the 204 days of creation the fish had an average final weight of 719.4g, average final length of 48.5cm, average final weight gain of 708.5g and average feed conversion of 1.59. Regarding the productivity of the olerícolas, it was found that the effluent water of the rearing system provided adequate amounts of nutrients necessary for the development of the plants. The results indicate that the pintado has the potential to be created in elevated geomembrane tanks with water recirculation system and the effluent of the system can be used as an alternative for the integrated production of fish and olerícolas.(AU)


El presente estudio tuvo como objetivo evaluar y desarrollar una nueva tecnología para la agricultura familiar, que integra la olericultura con la creación de pintados en tanques elevados de geomembrana con recirculación de agua. Con este fin, 240 peces con un peso promedio de 10.67g se distribuyeron aleatoriamente en un tanque de geomembrana con una capacidad de 30 m3 de agua. La calidad del agua fue monitoreada mediante el análisis de las variables temperatura del agua por medio de un termómetro, oxígeno disuelto, pH, alcalinidad, nitrito y amoníaco por medio de kits colorimétricos. La alimentación se realizó dos veces al día a las 07:00 y 19:00 con alimento extruido que contenía 32% de proteína cruda, durante un período de 204 días. La biometría se realizó mensualmente para corregir la alimentación, analizar el peso total promedio, la longitud total media, el aumento de peso y la conversión alimenticia. La calidad del agua durante el período experimental no presentó niveles críticos para la producción de peces y al final de los 204 días de cría los peces presentaron un peso final promedio de 719.4g, una longitud final promedio de 48.5cm, una ganancia de peso final promedio de 708.5g y una conversión alimenticia promedio de 1.59. En cuanto a la productividad de las olerícolas, se encontró que el agua efluente del sistema de cría proporcionó cantidades adecuadas de nutrientes necesarios para el desarrollo de las plantas. Los resultados indican que el pintado tiene el potencial de ser creado en tanques elevados de geomembrana con sistema de recirculación de agua y el efluente del sistema puede ser utilizado como una alternativa para la producción integrada de peces y olerícolas.(AU)


Subject(s)
Animals , Catfishes/physiology , Agriculture/trends , Fishes/growth & development , Technology/trends , Fisheries , Fabaceae/growth & development
6.
Braz. j. biol ; 83: 1-13, 2023. tab, graf
Article in English | LILACS, VETINDEX | ID: biblio-1468809

ABSTRACT

Interactions between endophytic fungi (EFs) and their host plants range from positive to neutral to negative. The results of such interactions can vary depending on the organ of the infected host plant. EFs isolated from the leaves of some species of plants have potential for use as agents to inhibit seed germination and control invasive plants. The objectives of this study were to identify EFs present in the leaves of Copaifera oblongifolia and to evaluate the role of these fungi in seed germination and seedling development. A total of 11 species of EFs were isolated, which were identified using the internal transcribed spacers (ITS) sequence of the nuclear ribosomal DNA. The isolated species of EFs are generalists and probably are transmitted horizontally. Laboratory tests revealed that filtrates of these fungal isolates differently affect seed germination and seedling development of C. oblongifolia. The species Curvularia intermedia, Neofusicoccum parvum, Pseudofusicoccum stromaticum and Phomopsis sp. negatively affected seed germination, with N. parvum standing out for its negative effects, inhibiting seedling germination and survival in 89 and 222%, respectively. In addition, Cochliobolus intermedius negatively affected seedling development. Thus, the combined use of N. parvum and C. intermedius, or products from the metabolism of these microorganisms, in the control of invasive plants deserves attention from future studies.


As interações entre fungos endofíticos (FEs) e suas plantas hospedeiras variam de positivas, neutras a negativas. Os resultados destas interações podem variar dependendo do órgão da planta hospedeira infectada. FEs isolados de folhas de algumas espécies de plantas têm potencial para serem usados como agentes inibidores da germinação de sementes e no controle de plantas invasoras. Os objetivos deste estudo foram identificar os FEs presentes nas folhas de Copaifera oblongifolia e avaliar o papel destes fungos na germinação das sementes e no desenvolvimento das plântulas. Um total de 11 espécies de FEs foi isolado das folhas de C. oblongifolia e identificado através da sequência dos espaçadores internos transcritos do DNA ribossomal nuclear. As espécies de FEs isoladas são generalistas e provavelmente devem ser transmitidas horizontalmente. Os resultados dos testes de germinação mostraram que filtrados destes isolados fúngicos podem afetar diferentemente a germinação das sementes e o desenvolvimento das plântulas de C. oblongifolia. As espécies Curvularia intermedia, Neofusicoccum parvum, Pseudofusicoccum stromaticum e Phomopsis sp. afetaram negativamente a germinação das sementes de C. oblongifolia. Dentre estas espécies devemos destacar que N. parvum reduziu a germinação e a sobrevivência das plântulas em 89 e 222%, respectivamente. Além disso, Cochiliobolus intermedius afetou negativamente o desenvolvimento das plântulas. Assim, o uso combinado de N. parvum e C. intermedius, ou de produtos do metabolismo destas espécies de fungos, têm potencial para serem usados no manejo de plantas invasoras.


Subject(s)
Animals , DNA, Ribosomal/analysis , Fabaceae/growth & development , Fungi/pathogenicity , Germination , Host Microbial Interactions , Seedlings/growth & development
7.
Molecules ; 27(3)2022 Jan 21.
Article in English | MEDLINE | ID: mdl-35163967

ABSTRACT

This study was planned to explore the locally available natural sources of gum hydrocolloids as a natural modifier of different starch properties. Corn (CS), sweet potato (SPS), and Turkish bean (TBS) starches were mixed with locally extracted native or acetylated cactus (CG) and acacia (AG) gums at 2 and 5% replacement levels. The binary mixtures (starch-gums) were prepared in water, freeze dried, ground to powder, and stored airtight. A rapid viscoanalyzer (RVA), differential scanning calorimeter (DSC), texture analyzer, and dynamic rheometer were used to explore their pasting, thermal, textural, and rheological properties. The presence of acetylated AG or CG increased the final viscosity (FV) in all three starches when compared to starch pastes containing native gums. Plain SPS dispersion had a higher pasting temperature (PT) than CS and TBS. The addition of AG or CG increased the PT of CS, SPS, and TBS. The thermograms revealed the overall enthalpy change of the starch and gum blends: TBS > SPS > CS. The peak temperature (Tp) of starches increased with increasing gum concentration from 2 to 5% for both AG and CG native and modified gums. When compared to the control gels, the addition of 2% CG, either native or modified, reduced the syneresis of starch gels. However, further addition (5% CG) increased the gels' syneresis. Furthermore, the syneresis for the first cycle on the fourth day was higher than the second cycle on the eighth day for all starches. The addition of native and acetylated CG reduced the hardness of starch gels at all concentrations tested. All of the starch dispersions had higher G' than G″ values, indicating that they were more elastic and less viscous with or without the gums. The apparent viscosity of all starch gels decreased as shear was increased, with profiles indicating time-dependent thixotropic behavior. All of the starch gels, with or without gums, showed a non-Newtonian shear thinning trend in the shear stress vs. shear rate graphs. The addition of acetylated CG gum to CS resulted in a higher activation energy (Ea) than the native counterparts and the control. More specifically, starch gels with a higher gum concentration (5%) provided greater Ea than their native counterparts.


Subject(s)
Fabaceae/metabolism , Ipomoea batatas/metabolism , Zea mays/metabolism , Acacia , Colloids , Fabaceae/growth & development , Gum Arabic/metabolism , Ipomoea batatas/growth & development , Opuntia/metabolism , Plant Gums , Rheology/methods , Saudi Arabia , Starch/metabolism , Temperature , Thermodynamics , Viscosity , Zea mays/growth & development
8.
J Sci Food Agric ; 102(1): 156-166, 2022 Jan 15.
Article in English | MEDLINE | ID: mdl-34080187

ABSTRACT

BACKGROUND: Cereal-legume intercropping systems are an environmentally friendly practice in sustainable agriculture. However, research on the interspecific interaction of nitrogen (N) between rice and aquatic legumes has rarely been undertaken. To address this issue, a pot experiment was conducted to investigate N utilization and the N interaction between rice and water mimosa (Neptunia oleracea Lour.) in an intercropping system. The root barrier patterns consisted of solid barrier (SB), mesh barrier (MB), and no barrier (NB) treatments. The N fertilizer application rates were low, medium, and high N rates. RESULTS: The results showed that the NB treatment better facilitated rice growth compared with the MB and SB treatments. And the nitrate N content and urease activity of rice rhizospheric soil in the NB treatment were the highest of the three separated patterns. The ammonium N content in water mimosa rhizospheric soil and N2 fixation of water mimosa ranked as NB > MB > SB. CONCLUSIONS: The amount of N fixation by water mimosa was 4.38-13.64 mg/pot, and the N transfer from water mimosa to rice was 3.97-9.54 mg/pot. This can promote the growth of rice and reduce the application of N fertilizer. We suggest that the rice-water mimosa intercropping system is a sustainable ecological farming approach and can be applied in the field to facilitate rice production. © 2021 Society of Chemical Industry.


Subject(s)
Crop Production/methods , Fabaceae/metabolism , Nitrogen/metabolism , Oryza/growth & development , Fabaceae/growth & development , Fertilizers/analysis , Nitrates/metabolism , Nitrogen Fixation , Oryza/metabolism , Plant Roots/growth & development , Plant Roots/metabolism , Soil/chemistry
9.
Braz. j. biol ; 82: 1-8, 2022. tab, graf, ilus
Article in English | LILACS, VETINDEX | ID: biblio-1468483

ABSTRACT

In the tropical region, savannas and seasonal forests, both highly diverse biomes, occur side by side, under the same climate. If so, that mosaic cannot be explained solely by climatic variables, but also by fire, water availability and soil status. Nutrient availability in the soil, especially nitrogen and phosphorus, has been postulated to explain the abrupt transitions between savannas and seasonal forests in tropical regions. Plants from these two biomes may present different nutritional strategies to cope with nitrogen and phosphorus limitation. We used two congeneric pairs of trees — each pair with a species from the savanna and another from the neighboring seasonal forest — to test whether savanna and forest species presented different nutritional strategies during their early development. We cultivated 56 individuals from each of these species in a hydroponics system with four treatments: (1) complete Hoagland solution, (2) Hoagland solution without nitrogen, (3) Hoagland solution without phosphorus, and (4) Hoagland solution without nitrogen and phosphorus. After 45 days, we harvested the plants and measured total biomass, root to shoot ratio, height, leaf area, and specific leaf area. Overall, savanna species were lighter, shorter, with smaller leaves, higher specific leaf areas, and higher root to shoot ratios when compared to the forest species. Nitrogen increased the performance of species from both biomes. Phosphorus improved the performance of the forest species and caused toxicity symptoms in the savanna species. Hence, savanna and forest species presented different demands and were partially distinct already as seedlings concerning their nutritional strategies.


Em regiões tropicais, savanas e florestas estacionais, biomas altamente diversos, ocorrem lado a lado, sob o mesmo clima. Sendo assim, esse mosaico não pode ser explicado somente por variáveis climáticas, devendo ser considerada a frequência e intensidade de incêndios, disponibilidade de água e status do solo. A disponibilidade de nutrientes no solo, especialmente nitrogênio e fósforo, tem sido postulada para explicar as transições abruptas entre savanas e florestas estacionais nos trópicos. Espécies vegetais desses dois biomas podem apresentar estratégias nutricionais diferentes para lidar com a limitação tanto de nitrogênio como de fósforo. Utilizamos dois pares de árvores congenéricas — cada par com uma espécie típica de savana e outra de floresta estacional vizinha — para testar se as espécies da savana e da floresta apresentaram estratégias nutricionais diferentes durante seu desenvolvimento inicial. Cultivamos 56 indivíduos de cada uma dessas espécies em um sistema hidropônico com quatro tratamentos: (1) solução Hoagland completa, (2) solução Hoagland sem nitrogênio, (3) solução Hoagland sem fósforo e (4) solução Hoagland sem nitrogênio e fósforo. Após 45 dias, colhemos as plantas e medimos a biomassa total, a relação raiz / parte aérea, altura, área foliar e área foliar específica. No geral, as espécies savânicas foram mais leves, menores em altura, área foliar e área foliar específica e apresentaram maiores razões entre biomassa radicular por biomassa aérea quando comparadas às espécies florestais. A oferta de nitrogênio aumentou o desempenho das espécies de ambos biomas. O fósforo melhorou o desempenho das espécies florestais e causou sintomas de toxicidade nas espécies savânicas. Concluímos que, já como mudas, espécies congenéricas de savana e floresta apresentaram demandas distintas e foram parcialmente diferentes em relação a suas estratégias nutricionais.


Subject(s)
Soil Characteristics/analysis , Rainforest , Phosphorus/administration & dosage , Hydroponics , Nitrogen/administration & dosage , Grassland , Soil Chemistry/analysis , Fabaceae/growth & development , Fabaceae/drug effects , Solanum/growth & development , Solanum/drug effects
10.
Proc Natl Acad Sci U S A ; 118(49)2021 12 07.
Article in English | MEDLINE | ID: mdl-34845020

ABSTRACT

Fertile soils have been an essential resource for humanity for 10,000 y, but the ecological mechanisms involved in the creation and restoration of fertile soils, and especially the role of plant diversity, are poorly understood. Here we use results of a long-term, unfertilized plant biodiversity experiment to determine whether biodiversity, especially plant functional biodiversity, impacted the regeneration of fertility on a degraded sandy soil. After 23 y, plots containing 16 perennial grassland plant species had, relative to monocultures of these same species, ∼30 to 90% greater increases in soil nitrogen, potassium, calcium, magnesium, cation exchange capacity, and carbon and had ∼150 to 370% greater amounts of N, K, Ca, and Mg in plant biomass. Our results suggest that biodiversity, likely in combination with the increased plant productivity caused by higher biodiversity, led to greater soil fertility. Moreover, plots with high plant functional diversity, those containing grasses, legumes, and forbs, accumulated significantly greater N, K, Ca, and Mg in the total nutrient pool (plant biomass and soil) than did plots containing just one of these three functional groups. Plant species in these functional groups had trade-offs between their tissue N content, tissue K content, and root mass, suggesting why species from all three functional groups were essential for regenerating soil fertility. Our findings suggest that efforts to regenerate soil C stores and soil fertility may be aided by creative uses of plant diversity.


Subject(s)
Environmental Restoration and Remediation/methods , Plants/metabolism , Soil/chemistry , Biodiversity , Biomass , Carbon/metabolism , Conservation of Natural Resources/methods , Ecosystem , Fabaceae/growth & development , Fertility/drug effects , Grassland , Nitrogen/analysis , Nitrogen/metabolism , Plant Development/drug effects , Poaceae/growth & development , Potassium/metabolism , Soil Microbiology
11.
Sci Rep ; 11(1): 22835, 2021 11 24.
Article in English | MEDLINE | ID: mdl-34819547

ABSTRACT

In the current study, an eco-friendly management technology to improve young carob (Ceratonia siliqua L.) tree tolerance to water deficit was set up by using single or combined treatments of arbuscular mycorrhizal fungi (AMF) and/or compost (C). Two groups of young carob have been installed: (i) carob cultivated under well-watered conditions (WW; 70% field capacity (FC)) and (ii) where the plants were drought-stressed (DS; 35% FC) during 2, 4, 6, and 8 months. The effect of used biofertilizers on the course of growth, physiological (photosynthetic traits, water status, osmolytes, and mineral content), and biochemical (hydrogen peroxide (H2O2), oxidative damage to lipids (malondialdehyde (MDA), and membrane stability (MS)) traits in response to short- and long-term droughts were assessed. The dual application of AMF and C (C + AMF) boosted growth, physiological and biochemical parameters, and nutrient uptake in carob under WW and DS. After eight months, C + AMF significantly enhanced stomatal conductance by 20%, maximum photochemical efficiency of PSII by 7%, leaf water potential by 23%, chlorophyll and carotenoid by 40%, plant uptake of mineral nutrients (P by 75%, N by 46%, K+ by 35%, and Ca2+ by 40%), concentrations of soluble sugar by 40%, and protein content by 44% than controls under DS conditions. Notably, C + AMF reduced the accumulation of H2O2 and MDA content to a greater degree and increased MS. In contrast, enzyme activities (superoxide dismutase, catalase, peroxidase, and polyphenoloxidase) significantly increased in C + AMF plants under DS. Overall, our findings suggest that the pairing of C + AMF can mediate superior drought tolerance in young carob trees by increasing leaf stomatal conductance, cellular water content, higher solute concentration, and defense response against oxidative damage during the prolonged period of DS.


Subject(s)
Composting , Droughts , Fabaceae/growth & development , Mycorrhizae/physiology , Organic Agriculture , Stress, Physiological , Trees/growth & development , Antioxidants/metabolism , Fabaceae/metabolism , Fabaceae/microbiology , Organism Hydration Status , Oxidative Stress , Photosynthesis , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Leaves/microbiology , Plant Proteins/metabolism , Symbiosis , Trees/metabolism , Trees/microbiology , Water/metabolism
12.
BMC Plant Biol ; 21(1): 466, 2021 Oct 13.
Article in English | MEDLINE | ID: mdl-34645406

ABSTRACT

BACKGROUND: Phosphorus (P) is an essential macronutrient for plant growth that participates in a series of biological processes. Thus, P deficiency limits crop growth and yield. Although Stylosanthes guianensis (stylo) is an important tropical legume that displays adaptation to low phosphate (Pi) availability, its adaptive mechanisms remain largely unknown. RESULTS: In this study, differences in low-P stress tolerance were investigated using two stylo cultivars ('RY2' and 'RY5') that were grown in hydroponics. Results showed that cultivar RY2 was better adapted to Pi starvation than RY5, as reflected by lower values of relative decrease rates of growth parameters than RY5 at low-P stress, especially for the reduction of shoot and root dry weight. Furthermore, RY2 exhibited higher P acquisition efficiency than RY5 under the same P treatment, although P utilization efficiency was similar between the two cultivars. In addition, better root growth performance and higher leaf and root APase activities were observed with RY2 compared to RY5. Subsequent RNA-seq analysis revealed 8,348 genes that were differentially expressed under P deficient and sufficient conditions in RY2 roots, with many Pi starvation regulated genes associated with P metabolic process, protein modification process, transport and other metabolic processes. A group of differentially expressed genes (DEGs) involved in Pi uptake and Pi homeostasis were identified, such as genes encoding Pi transporter (PT), purple acid phosphatase (PAP), and multidrug and toxin extrusion (MATE). Furthermore, a variety of genes related to transcription factors and regulators involved in Pi signaling, including genes belonging to the PHOSPHATE STARVATION RESPONSE 1-like (PHR1), WRKY and the SYG1/PHO81/XPR1 (SPX) domain, were also regulated by P deficiency in stylo roots. CONCLUSIONS: This study reveals the possible mechanisms underlying the adaptation of stylo to P deficiency. The low-P tolerance in stylo is probably manifested through regulation of root growth, Pi acquisition and cellular Pi homeostasis as well as Pi signaling pathway. The identified genes involved in low-P tolerance can be potentially used to design the breeding strategy for developing P-efficient stylo cultivars to grow on acid soils in the tropics.


Subject(s)
Adaptation, Physiological/genetics , Deficiency Diseases/genetics , Fabaceae/growth & development , Fabaceae/genetics , Phosphorus/deficiency , Transcriptome , China , Crops, Agricultural/genetics , Crops, Agricultural/growth & development , Gene Expression Regulation, Plant , Genes, Plant , Genetic Variation , Genotype
13.
Int J Mol Sci ; 22(19)2021 Sep 29.
Article in English | MEDLINE | ID: mdl-34638885

ABSTRACT

Legumes are a better source of proteins and are richer in diverse micronutrients over the nutritional profile of widely consumed cereals. However, when exposed to a diverse range of abiotic stresses, their overall productivity and quality are hugely impacted. Our limited understanding of genetic determinants and novel variants associated with the abiotic stress response in food legume crops restricts its amelioration. Therefore, it is imperative to understand different molecular approaches in food legume crops that can be utilized in crop improvement programs to minimize the economic loss. 'Omics'-based molecular breeding provides better opportunities over conventional breeding for diversifying the natural germplasm together with improving yield and quality parameters. Due to molecular advancements, the technique is now equipped with novel 'omics' approaches such as ionomics, epigenomics, fluxomics, RNomics, glycomics, glycoproteomics, phosphoproteomics, lipidomics, regulomics, and secretomics. Pan-omics-which utilizes the molecular bases of the stress response to identify genes (genomics), mRNAs (transcriptomics), proteins (proteomics), and biomolecules (metabolomics) associated with stress regulation-has been widely used for abiotic stress amelioration in food legume crops. Integration of pan-omics with novel omics approaches will fast-track legume breeding programs. Moreover, artificial intelligence (AI)-based algorithms can be utilized for simulating crop yield under changing environments, which can help in predicting the genetic gain beforehand. Application of machine learning (ML) in quantitative trait loci (QTL) mining will further help in determining the genetic determinants of abiotic stress tolerance in pulses.


Subject(s)
Artificial Intelligence , Crops, Agricultural/genetics , Fabaceae/genetics , Genomics , Plant Breeding , Stress, Physiological/genetics , Crops, Agricultural/growth & development , Fabaceae/growth & development , Quantitative Trait Loci
14.
PLoS One ; 16(9): e0257053, 2021.
Article in English | MEDLINE | ID: mdl-34587163

ABSTRACT

Due to increasing population growth and declining arable land on Earth, astroagriculture will be vital to terraform Martian regolith for settlement. Nodulating plants and their N-fixing symbionts may play a role in increasing Martian soil fertility. On Earth, clover (Melilotus officinalis) forms a symbiotic relationship with the N-fixing bacteria Sinorhizobium meliloti; clover has been previously grown in simulated regolith yet without bacterial inoculation. In this study, we inoculated clover with S. meliloti grown in potting soil and regolith to test the hypothesis that plants grown in regolith can form the same symbiotic associations as in soils and to determine if greater plant biomass occurs in the presence of S. meliloti regardless of growth media. We also examined soil NH4 concentrations to evaluate soil augmentation properties of nodulating plants and symbionts. Greater biomass occurred in inoculated compared to uninoculated groups; the inoculated average biomass in potting mix and regolith (2.23 and 0.29 g, respectively) was greater than the uninoculated group (0.11 and 0.01 g, respectively). However, no significant differences existed in NH4 composition between potting mix and regolith simulant. Linear regression analysis results showed that: i) symbiotic plant-bacteria relationships differed between regolith and potting mix, with plant biomass positively correlated to regolith-bacteria interactions; and, ii) NH4 production was limited to plant uptake yet the relationships in regolith and potting mix were similar. It is promising that plant-legume symbiosis is a possibility for Martian soil colonization.


Subject(s)
Fabaceae/microbiology , Mars , Nitrogen/metabolism , Sinorhizobium/physiology , Soil , Symbiosis/physiology , Ammonium Compounds/analysis , Biomass , Fabaceae/anatomy & histology , Fabaceae/growth & development , Linear Models , Plant Root Nodulation/physiology , Plant Shoots/anatomy & histology , Soil/chemistry
15.
Cells ; 10(7)2021 07 02.
Article in English | MEDLINE | ID: mdl-34359842

ABSTRACT

Noncoding RNAs, including microRNAs (miRNAs), small interference RNAs (siRNAs), circular RNA (circRNA), and long noncoding RNAs (lncRNAs), control gene expression at the transcription, post-transcription, and translation levels. Apart from protein-coding genes, accumulating evidence supports ncRNAs playing a critical role in shaping plant growth and development and biotic and abiotic stress responses in various species, including legume crops. Noncoding RNAs (ncRNAs) interact with DNA, RNA, and proteins, modulating their target genes. However, the regulatory mechanisms controlling these cellular processes are not well understood. Here, we discuss the features of various ncRNAs, including their emerging role in contributing to biotic/abiotic stress response and plant growth and development, in addition to the molecular mechanisms involved, focusing on legume crops. Unravelling the underlying molecular mechanisms and functional implications of ncRNAs will enhance our understanding of the coordinated regulation of plant defences against various biotic and abiotic stresses and for key growth and development processes to better design various legume crops for global food security.


Subject(s)
Fabaceae/genetics , Gene Expression Regulation, Plant , MicroRNAs/genetics , RNA, Circular/genetics , RNA, Long Noncoding/genetics , RNA, Plant/genetics , RNA, Small Interfering/genetics , Fabaceae/growth & development , Fabaceae/metabolism , Food Security , Gene Expression Regulation, Developmental , Humans , MicroRNAs/classification , MicroRNAs/metabolism , Organ Specificity , Protein Biosynthesis , RNA, Circular/classification , RNA, Circular/metabolism , RNA, Long Noncoding/classification , RNA, Long Noncoding/metabolism , RNA, Plant/classification , RNA, Plant/metabolism , RNA, Small Interfering/classification , RNA, Small Interfering/metabolism , Species Specificity , Stress, Physiological/genetics , Transcription, Genetic
16.
J Microbiol Biotechnol ; 31(10): 1373-1382, 2021 Oct 28.
Article in English | MEDLINE | ID: mdl-34409947

ABSTRACT

Plant growth promoting rhizobacteria (PGPR) are a group of bacteria that can increase plant growth; but due to unfavorable environmental conditions, PGPR are biologically unstable and their survival rates in soil are limited. Therefore, the suitable application of PGPR as a plant growth stimulation is one of the significant challenges in agriculture. This study presents an intelligent formulation based on Bacillus velezensis VRU1 encapsulation enriched with nanoparticles that was able to control Rhizoctonia solani on the bean. The spherical structure of the capsule was observed based on the Scanning Electron Microscope image. Results indicated that with increasing gelatin concentration, the swelling ratio and moisture content were increased; and since the highest encapsulation efficiency and bacterial release were observed at a gelatin concentration of 1.5%, this concentration was considered in mixture with alginate for encapsulation. The application of this formulation which is based on encapsulation and nanotechnology appears to be a promising technique to deliver PGPR in soil and is more effective for plants.


Subject(s)
Bacillus/physiology , Biological Control Agents , Fabaceae/microbiology , Plant Diseases/prevention & control , Rhizoctonia/pathogenicity , Alginates/chemistry , Biological Control Agents/administration & dosage , Fabaceae/growth & development , Gelatin/chemistry , Nanoparticles/chemistry , Plant Diseases/microbiology , Soil Microbiology
17.
Sci Rep ; 11(1): 15360, 2021 07 28.
Article in English | MEDLINE | ID: mdl-34321544

ABSTRACT

The interest expressed by the agriculture in the category of innovative biostimulants is due to the intensive search for natural preparations. Our study is the first ever to report a complex approach to the use of allelopathic extracts from Levisticum officinale Koch. roots in soybean cultivation, includes analyses of morphological observations, and analyses of biochemical indicators. Hot method of aqueous extraction was applied. The extracts were administered via foliar application and soil treatment. Lovage extracts had high contents of polyphenolic compounds and rich micro- and macroelemental composition. The infusions did not contain gibberellic acid and indole-3-acetic acid but the abscisic acid and saccharose, glucose, and fructose were found. The extracts modified soybean plant physiology, as manifested by changes in biometric traits. Plants responded positively by increased yield. Seeds from the treated plants had higher contents of micro- and macroelements, as well as total concentrations of lipids (with a slight decrease in protein content). In addition, they featured changes in their amino acid profile and fatty acid composition. The application of allelopathic biostimulant caused increased concentrations of isoflavones and saponins. The natural biostimulants from Levisticum officinale may become a valuable tool in the sustainable agriculture.


Subject(s)
Glycine max/chemistry , Levisticum/drug effects , Plant Extracts/pharmacology , Plant Roots/chemistry , Abscisic Acid/chemistry , Abscisic Acid/pharmacology , Fabaceae/drug effects , Fabaceae/growth & development , Gibberellins/chemistry , Glucose/chemistry , Glucose/pharmacology , Levisticum/chemistry , Levisticum/growth & development , Pheromones/chemistry , Pheromones/pharmacology , Plant Extracts/chemistry , Seeds/chemistry , Sucrose/chemistry , Sucrose/pharmacology , Water/chemistry
18.
PLoS One ; 16(7): e0254584, 2021.
Article in English | MEDLINE | ID: mdl-34252159

ABSTRACT

Summer weed species, including Echinochloa colona, are becoming problematic in the eastern grain region of Australia, but cover crops can be useful to suppress weeds during the summer fallow period. The present study evaluated the growth and seed production of E. colona grown alone or with four and eight cover crop plants per pot (i.e., 80 and 160 plants m-2). Four legume (cowpea, lablab, pigeonpea, and soybean) and two grass (forage sorghum and Japanese millet) cover crops were used. Interference by cover crops reduced the height, the number of leaves and tillers, inflorescence number, seed production, and biomass of this weed than when it was grown alone. Cover crops differed in their ability to suppress the growth and seed production of E. colona. The effect of cover crop density on the studied attributes was non-significant in most cases. Pigeonpea as a cover crop was the least effective in suppressing the growth and seed production of E. colona. In general, leguminous cover crops exhibited less suppression of E. colona than grasses. Forage sorghum was most efficient in reducing the growth of this weed. Forage sorghum and Japanese millet reduced E. colona leaf and tiller numbers per plant by 90 and 87%, respectively. These cover crops reduced E. colona leaf number to only 17 per plant as against 160 per plant recorded without cover crops. Inflorescence number per E. colona plant growing alone was as high as 48. However, it was reduced by 20-92% when this weed was grown with cover crop plants. E. colona's seed production was significantly suppressed by all the cover crops, except pigeonpea. Biomass of E. colona was suppressed largely by forage sorghum and Japanese millet compared to other cover crops. Among the cover crops, pigeonpea produced the lowest biomass of 11 g pot-1, and the highest biomass (114 g pot-1) was produced by forage sorghum. The study demonstrated the usefulness of cover crops, especially forage sorghum and Japanese millet, to suppress the growth and seed output of E. colona.


Subject(s)
Crops, Agricultural/growth & development , Echinochloa/growth & development , Fabaceae/growth & development , Sorghum/growth & development , Plant Leaves/growth & development
19.
Plant Cell Environ ; 44(10): 3347-3357, 2021 10.
Article in English | MEDLINE | ID: mdl-34327717

ABSTRACT

It has been suggested that a trade-off between hydraulic efficiency and safety is related to drought adaptation across species. However, whether leaf hydraulic efficiency is sacrificed for safety during woody resprout regrowth after crown removal is not well understood. We measured leaf water potential (ψleaf ) at predawn (ψpd ) and midday (ψmid ), leaf maximum hydraulic conductance (Kleaf-max ), ψleaf at induction 50% loss of Kleaf-max (Kleaf P50 ), leaf area-specific whole-plant hydraulic conductance (LSC), leaf vein structure and turgor loss point (πtlp ) in 1- to 13-year-old resprouts of the aridland shrub (Caragana korshinskii). ψpd was similar, ψmid and Kleaf P50 became more negative, and Kleaf-max decreased in resprouts with the increasing age; thus, leaf hydraulic efficiency clearly traded off against safety. The difference between ψmid and Kleaf P50 , leaf hydraulic safety margin, increased gradually with increasing resprout age. More negative ψmid and Kleaf P50 were closely related to decreasing LSC and more negative πtlp , respectively, and the decreasing Kleaf-max arose from the lower minor vein density and the narrower midrib xylem vessels. Our results showed that a clear trade-off between leaf hydraulic efficiency and safety helps C. korshinskii resprouts adapt to increasing water stress as they approach final size.


Subject(s)
Fabaceae/physiology , Plant Leaves/physiology , Water/metabolism , Biomechanical Phenomena , Desert Climate , Fabaceae/growth & development
20.
Food Chem ; 362: 130206, 2021 Nov 15.
Article in English | MEDLINE | ID: mdl-34082289

ABSTRACT

Legumes are the main sources of folates which are not synthesized in the human body. The five folate species: 5-methyl tetrahydrofolate, tetrahydrofolate, pteroyl glutamate, 5-formyl tetrahydrofolate and 10-formyl tetrahydrofolate were quantitatively determined in legumes seeds and sprouts by a newly developed and validated high performance thin layer chromatography method. High resolution plate imaging hyphenated to mass spectrometry was exploited for fingerprint analysis of tested samples. Results indicated that germination of all seeds resulted in a 2.5-4 fold increase in the content of total folates as well as the individual vitamers. The total amount of folate reached a maximum on the fifth day in the case of black-eyed peas (861 µg/100 g Fresh Weight), white beans (755 µg/100 g FW) and brown lentils (681 µg/100 g FW). 5-CH3-H4 folate was found to be the most dominating folate species reaching its maximum content in day 5 sprouts of black-eyed peas (490 µg/100 g FW).


Subject(s)
Chromatography, Thin Layer/methods , Fabaceae/chemistry , Folic Acid/analysis , Mass Spectrometry/methods , Seeds/chemistry , Fabaceae/growth & development , Food Analysis/methods , Food Analysis/statistics & numerical data , Germination , Image Processing, Computer-Assisted , Lens Plant/chemistry , Leucovorin/analogs & derivatives , Leucovorin/analysis , Molecular Imaging/methods , Multivariate Analysis , Reproducibility of Results , Seeds/growth & development , Tetrahydrofolates/analysis
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