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1.
Microbiol Res ; 284: 127738, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38692035

ABSTRACT

This study aimed to (i) investigate the potential for enhanced phytoremediation to remove contaminants from soil historically co-contaminated with petroleum hydrocarbons (PHs) and heavy metals (HMs) and (ii) analyze the expression of crucial bacterial genes and whole metatranscriptomics profiles for better understanding of soil processes during applied treatment. Phytoremediation was performed using Zea mays and supported by the Pseudomonas qingdaonensis ZCR6 strain and a natural biofertilizer: meat and bone meal (MBM). In previous investigations, mechanisms supporting plant growth and PH degradation were described in the ZCR6 strain. Here, ZCR6 survived in the soil throughout the experiment, but the efficacy of PH removal from all soils fertilized with MBM reached 32 % regardless of the bacterial inoculation. All experimental groups contained 2 % (w/w) MBM. The toxic effect of this amendment on plants was detected 30 days after germination, irrespective of ZCR6 inoculation. Among the 17 genes tested using the qPCR method, only expression of the acdS gene, encoding 1-aminocyclopropane-1-carboxylic acid deaminase, and the CYP153 gene, encoding cytochrome P450-type alkane hydroxylase, was detected in soils. Metatranscriptomic analysis of soils indicated increased expression of methane particulated ammonia monooxygenase subunit A (pmoA-amoA) by Nitrosomonadales bacteria in all soils enriched with MBM compared to the non-fertilized control. We suggest that the addition of 2 % (w/w) MBM caused the toxic effect on plants via the rapid release of ammonia, and this led to high pmoA-amoA expression. In parallel, due to its wide substrate specificity, enhanced bacterial hydrocarbon removal in MBM-treated soils was observed. The metatranscriptomic results indicate that MBM application should be considered to improve bioremediation of soils polluted with PHs rather than phytoremediation. However, lower concentrations of MBM could be considered for phytoremediation enhancement. From a broader perspective, these results indicated the superior capability of metatranscriptomics to investigate the microbial mechanisms driving various bioremediation techniques.


Subject(s)
Biodegradation, Environmental , Pseudomonas , Soil Microbiology , Soil Pollutants , Zea mays , Soil Pollutants/metabolism , Zea mays/metabolism , Zea mays/microbiology , Pseudomonas/genetics , Pseudomonas/metabolism , Pseudomonas/isolation & purification , Metals, Heavy/metabolism , Petroleum/metabolism , Soil/chemistry , Hydrocarbons/metabolism , Gene Expression Profiling , Carbon-Carbon Lyases/metabolism , Carbon-Carbon Lyases/genetics , Transcriptome
2.
J Chromatogr A ; 1726: 464946, 2024 Jul 05.
Article in English | MEDLINE | ID: mdl-38744185

ABSTRACT

On-line coupled high performance liquid chromatography-gas chromatography-flame ionisation detection (HPLC-GC-FID) was used to compare the effect of hydrogen, helium and nitrogen as carrier gases on the chromatographic characteristics for the quantification of mineral oil hydrocarbon (MOH) traces in food related matrices. After optimisation of chromatographic parameters nitrogen carrier gas exhibited characteristics equivalent to hydrogen and helium regarding requirements set by current guidelines and standardisation such as linear range, quantification limit and carry over. Though nitrogen expectedly led to greater peak widths, all required separations of standard compounds were sufficient and humps of saturated mineral oil hydrocarbons (MOSH) and aromatic mineral oil hydrocarbons (MOAH) were appropriate to enable quantitation similar to situations where hydrogen or helium had been used. Slightly increased peak widths of individual hump components did not affect shapes and widths of the MOSH and MOAH humps were not significantly affected by the use of nitrogen as carrier gas. Notably, nitrogen carrier gas led to less solvent peak tailing and smaller baseline offset. Overall, nitrogen may be regarded as viable alternative to hydrogen or helium and may even extend the range of quantifiable compounds to highly volatile hydrocarbon eluting directly after the solvent peak.


Subject(s)
Hydrocarbons , Mineral Oil , Chromatography, High Pressure Liquid/methods , Chromatography, Gas/methods , Mineral Oil/chemistry , Mineral Oil/analysis , Hydrocarbons/analysis , Nitrogen/analysis , Helium/chemistry , Hydrogen/chemistry , Flame Ionization/methods , Gases/chemistry
3.
Environ Monit Assess ; 196(6): 566, 2024 May 22.
Article in English | MEDLINE | ID: mdl-38775858

ABSTRACT

Microbial communities from freshwater sediments are involved in biogeochemical cycles and they can be modified by physical and chemical changes in the environment. Linking the microbial community structure (MCS) with physicochemistry of freshwater courses allows a better understanding of its ecology and can be useful to assess the ecological impact generated by human activity. The MCS of tributary channels from La Plata River affected by oil refinery (C, D, and E) and one also by urban discharges (C) was studied. For this purpose, 16S rRNA metabarcoding analysis, in silico metagenome functional prediction, and the hydrocarbon degradation potential (in silico predictions of hydrocarbon-degrading genes and their quantification by qPCR) of the MCS were studied. Principal coordinate analysis revealed that the MCS was different between sites, and it was not structured by the hydrocarbon content. Site C showed physicochemical characteristics, bacterial taxa, and an in silico functional prediction related to fermentative/heterotrophic metabolism. Site D, despite having higher concentration of hydrocarbon, presented autotrophic, syntrophic, and methanogenic pathways commonly involved in natural processes in anoxic sediments. Site E showed and intermediate autotrophic/heterotrophic behavior. The hydrocarbon degradation potential showed no positive correlation between the hydrocarbon-degrading genes quantified and predicted. The results suggest that the hydrocarbon concentration in the sites was not enough selection pressure to structure the bacterial community composition. Understanding which is the variable that structures the bacterial community composition is essential for monitoring and designing of sustainable management strategies for contaminated freshwater ecosystems.


Subject(s)
Environmental Monitoring , Microbiota , Rivers , Water Pollutants, Chemical , Rivers/microbiology , Rivers/chemistry , Water Pollutants, Chemical/metabolism , Water Pollutants, Chemical/analysis , Argentina , RNA, Ribosomal, 16S/genetics , Biodegradation, Environmental , Hydrocarbons/metabolism , Geologic Sediments/microbiology , Geologic Sediments/chemistry , Bacteria/metabolism , Bacteria/classification , Bacteria/genetics , Environmental Restoration and Remediation/methods
4.
Microb Cell Fact ; 23(1): 126, 2024 May 02.
Article in English | MEDLINE | ID: mdl-38698402

ABSTRACT

BACKGROUND: Hydrocarbon pollution stemming from petrochemical activities is a significant global environmental concern. Bioremediation, employing microbial chitinase-based bioproducts to detoxify or remove contaminants, presents an intriguing solution for addressing hydrocarbon pollution. Chitooligosaccharides, a product of chitin degradation by chitinase enzymes, emerge as key components in this process. Utilizing chitinaceous wastes as a cost-effective substrate, microbial chitinase can be harnessed to produce Chitooligosaccharides. This investigation explores two strategies to enhance chitinase productivity, firstly, statistical optimization by the Plackett Burman design approach to  evaluating the influence of individual physical and chemical parameters on chitinase production, Followed by  response surface methodology (RSM) which delvs  into the interactions among these factors to optimize chitinase production. Second, to further boost chitinase production, we employed heterologous expression of the chitinase-encoding gene in E. coli BL21(DE3) using a suitable vector. Enhancing chitinase activity not only boosts productivity but also augments the production of Chitooligosaccharides, which are found to be used as emulsifiers. RESULTS: In this study, we focused on optimizing the production of chitinase A from S. marcescens using the Plackett Burman design and response surface methods. This approach led to achieving a maximum activity of 78.65 U/mL. Subsequently, we cloned and expressed the gene responsible for chitinase A in E. coli BL21(DE3). The gene sequence, named SmChiA, spans 1692 base pairs, encoding 563 amino acids with a molecular weight of approximately 58 kDa. This sequence has been deposited in the NCBI GenBank under the accession number "OR643436". The purified recombinant chitinase exhibited a remarkable activity of 228.085 U/mL, with optimal conditions at a pH of 5.5 and a temperature of 65 °C. This activity was 2.9 times higher than that of the optimized enzyme. We then employed the recombinant chitinase A to effectively hydrolyze shrimp waste, yielding chitooligosaccharides (COS) at a rate of 33% of the substrate. The structure of the COS was confirmed through NMR and mass spectrometry analyses. Moreover, the COS demonstrated its utility by forming stable emulsions with various hydrocarbons. Its emulsification index remained stable across a wide range of salinity, pH, and temperature conditions. We further observed that the COS facilitated the recovery of motor oil, burned motor oil, and aniline from polluted sand. Gravimetric assessment of residual hydrocarbons showed a correlation with FTIR analyses, indicating the efficacy of COS in remediation efforts. CONCLUSIONS: The recombinant chitinase holds significant promise for the biological conversion of chitinaceous wastes into chitooligosaccharides (COS), which proved its potential in bioremediation efforts targeting hydrocarbon-contaminated sand.


Subject(s)
Biodegradation, Environmental , Chitinases , Chitosan , Oligosaccharides , Recombinant Proteins , Chitinases/metabolism , Chitinases/genetics , Oligosaccharides/metabolism , Animals , Chitosan/metabolism , Recombinant Proteins/metabolism , Recombinant Proteins/genetics , Recombinant Proteins/biosynthesis , Chitin/metabolism , Hydrocarbons/metabolism , Escherichia coli/metabolism , Escherichia coli/genetics , Crustacea/metabolism , Emulsifying Agents/metabolism , Emulsifying Agents/chemistry
5.
Sci Rep ; 14(1): 11335, 2024 05 17.
Article in English | MEDLINE | ID: mdl-38760417

ABSTRACT

Crude oil hydrocarbons are considered major environmental pollutants and pose a significant threat to the environment and humans due to having severe carcinogenic and mutagenic effects. Bioremediation is one of the practical and promising technology that can be applied to treat the hydrocarbon-polluted environment. In this present study, rhamnolipid biosurfactant (BS) produced by Pseudomonas aeruginosa PP4 and green synthesized iron nanoparticles (G-FeNPs) from Lawsonia inermis was used to evaluate the biodegradation efficiency (BE) of crude oil. The surface analysis of G-FeNPs was carried out by using FESEM and HRTEM to confirm the size and shape. Further, the average size of the G-FeNPs was observed around 10 nm by HRTEM analysis. The XRD and Raman spectra strongly confirm the presence of iron nanoparticles with their respective peaks. The BE (%) of mixed degradation system-V (PP4+BS+G-FeNPs) was obtained about 82%. FTIR spectrum confirms the presence of major functional constituents (C=O, -CH3, C-O, and OH) in the residual oil content. Overall, this study illustrates that integrated nano-based bioremediation could be an efficient approach for hydrocarbon-polluted environments. This study is the first attempt to evaluate the G-FeNPs with rhamnolipid biosurfactant on the biodegradation of crude oil.


Subject(s)
Biodegradation, Environmental , Hydrocarbons , Petroleum , Hydrocarbons/metabolism , Hydrocarbons/chemistry , Petroleum/metabolism , Lawsonia Plant/chemistry , Lawsonia Plant/metabolism , Pseudomonas aeruginosa/metabolism , Magnetic Iron Oxide Nanoparticles/chemistry , Surface-Active Agents/metabolism , Surface-Active Agents/chemistry , Glycolipids/chemistry , Glycolipids/metabolism , Spectroscopy, Fourier Transform Infrared , Environmental Pollutants/metabolism
6.
Environ Microbiol Rep ; 16(3): e13264, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38692840

ABSTRACT

This study assessed the bacterioplankton community and its relationship with environmental variables, including total petroleum hydrocarbon (TPH) concentration, in the Yucatan shelf area of the Southern Gulf of Mexico. Beta diversity analyses based on 16S rRNA sequences indicated variations in the bacterioplankton community structure among sampling sites. PERMANOVA indicated that these variations could be mainly related to changes in depth (5 to 180 m), dissolved oxygen concentration (2.06 to 5.93 mg L-1), and chlorophyll-a concentration (0.184 to 7.65 mg m3). Moreover, SIMPER and one-way ANOVA analyses showed that the shifts in the relative abundances of Synechococcus and Prochlorococcus were related to changes in microbial community composition and chlorophyll-a values. Despite the low TPH content measured in the studied sites (0.01 to 0.86 µL L-1), putative hydrocarbon-degrading bacteria such as Alteromonas, Acinetobacter, Balneola, Erythrobacter, Oleibacter, Roseibacillus, and the MWH-UniP1 aquatic group were detected. The relatively high copy number of the alkB gene detected in the water column by qPCR and the enrichment of hydrocarbon-degrading bacteria obtained during lab crude oil tests exhibited the potential of bacterioplankton communities from the Yucatan shelf to respond to potential hydrocarbon impacts in this important area of the Gulf Mexico.


Subject(s)
Bacteria , Hydrocarbons , RNA, Ribosomal, 16S , Seawater , Gulf of Mexico , Hydrocarbons/metabolism , Bacteria/genetics , Bacteria/classification , Bacteria/metabolism , Bacteria/isolation & purification , Seawater/microbiology , RNA, Ribosomal, 16S/genetics , Microbiota , Phylogeny , Petroleum/metabolism , Petroleum/microbiology , Biodegradation, Environmental , Biodiversity
7.
ACS Infect Dis ; 10(5): 1839-1855, 2024 May 10.
Article in English | MEDLINE | ID: mdl-38725407

ABSTRACT

Multidrug resistance against conventional antibiotics has dramatically increased the difficulty of treatment and accelerated the need for novel antibacterial agents. The peptide Tat (47-57) is derived from the transactivating transcriptional activator of human immunodeficiency virus 1, which is well-known as a cell-penetrating peptide in mammalian cells. However, it is also reported that the Tat peptide (47-57) has antifungal activity. In this study, a series of membrane-active hydrocarbon-stapled α-helical amphiphilic peptides were synthesized and evaluated as antibacterial agents against Gram-positive and Gram-negative bacteria, including multidrug-resistant strains. The impact of hydrocarbon staple, the position of aromatic amino acid residue in the hydrophobic face, the various types of aromatic amino acids, and the hydrophobicity on bioactivity were also investigated and discussed in this study. Among those synthesized peptides, analogues P3 and P10 bearing a l-2-naphthylalanine (Φ) residue at the first position and a Tyr residue at the eighth position demonstrated the highest antimicrobial activity and negligible hemolytic toxicity. Notably, P3 and P10 showed obviously enhanced antimicrobial activity against multidrug-resistant bacteria, low drug resistance, high cell selectivity, extended half-life in plasma, and excellent performance against biofilm. The antibacterial mechanisms of P3 and P10 were also preliminarily investigated in this effort. In conclusion, P3 and P10 are promising antimicrobial alternatives for the treatment of the antimicrobial-resistance crisis.


Subject(s)
Anti-Bacterial Agents , Microbial Sensitivity Tests , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/chemistry , Humans , tat Gene Products, Human Immunodeficiency Virus/chemistry , Gram-Negative Bacteria/drug effects , Drug Resistance, Multiple, Bacterial/drug effects , Gram-Positive Bacteria/drug effects , Hydrophobic and Hydrophilic Interactions , Hydrocarbons/chemistry , Hydrocarbons/pharmacology , Hemolysis/drug effects , Protein Conformation, alpha-Helical
8.
PLoS One ; 19(5): e0302468, 2024.
Article in English | MEDLINE | ID: mdl-38696445

ABSTRACT

In order to further clarify the shale oil accumulation period of the Chang 7 member of the Mesozoic Triassic Yanchang Formation in the Zhijing-Ansai area of the central Ordos Basin, Using fluid inclusion petrography analysis, microscopic temperature measurement, salinity analysis and fluorescence spectrum analysis methods, combined with the burial history-thermal history recovery in the area, the oil and gas accumulation period of the Chang 7 member of the Yanchang Formation in the Zhijing-Ansai area was comprehensively analyzed. Sixteen shale oil reservoir samples of the Mesozoic Triassic Yanchang Formation in seven typical wells in the study area were selected.The results show that the fluid inclusions in the Chang 7 member of Yanchang Formation can be divided into two stages. The first stage inclusions mainly develop liquid hydrocarbon inclusions and a large number of associated brine inclusions, which are mainly beaded in fracture-filled quartz and fracture-filled calcite. The fluorescence color is blue and blue-green, and the homogenization temperature of the associated brine inclusions is between 90-110°C. The second stage inclusions are mainly gas-liquid two-phase hydrocarbon inclusions, gas inclusions and asphalt inclusions. Most of them are distributed in the fracture-filled quartz, and the temperature of the associated brine inclusions is between 120-130°C. Fluid inclusions in Chang 7 member of the Yanchang Formation can be divided into two stages. The CO2 inclusions and high temperature inclusions in the Chang 7 member of the Yanchang Formation are mainly derived from deep volcanic activity in the crust.


Subject(s)
Oil and Gas Fields , China , Geologic Sediments/analysis , Temperature , Petroleum/analysis , Hydrocarbons/analysis
10.
PLoS One ; 19(4): e0294179, 2024.
Article in English | MEDLINE | ID: mdl-38630697

ABSTRACT

This study investigated the suitability of recycled asphalt pavement and polyethylene wastes as coarse aggregate in asphaltic concrete by evaluating the impact of the use of polyethylene polymer wastes and recycled asphalt pavement composite as aggregates on the physical and mechanical properties of the asphaltic concrete. The physical characteristics of the aggregate and bitumen were determined using relevant parametric tests. Recycled asphalt pavement was used to make asphaltic concrete samples using LDPE at 5%, 10%, 15%, RAP at 5% and HDPE at 5%, 10%, 15%, and a mixture of LDPE + HDPE at 5+5%, 7.5+7.5% and 10+10% RAP at 5% as additives. Marshall Stability test was conducted to assess the mechanical strength of the asphaltic concrete, and the results included information on the aggregate's stability, flow, density, voids filled with bitumen, voids filled with air, and voids in mineral aggregate. In addition, the surface and crystal structure of the aggregates was studied by carrying out a microscopic examination with a Scanning Electron Microscope (SEM) and X-Ray diffraction (XRD). The results obtained from this study demonstrated that RAP, HDPE & LDPE are viable conventional aggregate substitute for asphalt concrete production.


Subject(s)
Construction Materials , Polyethylene , Recycling/methods , Hydrocarbons/chemistry
11.
PLoS One ; 19(4): e0301528, 2024.
Article in English | MEDLINE | ID: mdl-38635694

ABSTRACT

An inexpensive and high-performing solid Coumarone resin was added to Styrene-butadiene-styrene (SBS) copolymer-modified asphalt to enhance its storage stability and road performance. To assess the effect of Coumarone resin dosage on the SBS-modified asphalt, a series of laboratory tests were conducted. The composite modified asphalt's segregation test was used to evaluate its storage stability, Dynamic Shear Rheometer (DSR) and Multiple Stress Creep Recovery (MSCR) tests were employed to investigate its high-temperature performance and permanent deformation resistance, and the Bending Beam Rheology (BBR) test was utilized to measure its low-temperature performance. Fluorescence microscopy was used to observe the composite modified asphalt's microstructure, and Fourier Transform Infrared Spectroscopy (FTIR) was conducted to study the changes in chemical structure during the modification process. The results showed that Coumarone resin can improve the compatibility of SBS and asphalt, improve the high-temperature performance and deformation resistance of SBS-modified asphalt, and adding an appropriate amount of Coumarone resin can help enhance the low-temperature cracking resistance of modified asphalt. The optimal dosage of Coumarone resin recommended for SBS-modified asphalt performance enhancement is 2% under the test conditions, as determined by comparing the test results of samples with various dosages.


Subject(s)
Benzofurans , Hydrocarbons , Styrene , Cold Temperature , Resins, Plant
12.
Sci Total Environ ; 930: 172371, 2024 Jun 20.
Article in English | MEDLINE | ID: mdl-38631638

ABSTRACT

Oil has been extracted from the Western Amazon since the 1920s, leading to severe environmental contamination due to frequent occurrence oil spills and the dumping of produced water. Local inhabitants, along with environmental and human rights organizations, have reported the adverse effects of oil-related pollution on their livelihoods and the ecosystems they depend on. Here, we study accumulation of oil-related heavy metals in wildlife, and its subsequent incorporation into the trophic chain. We analysed the concentration of 14 heavy metals (Cd, Cr, Hg, As, Ni, V, Ba, Se, Be, Fe, Cu, Zn, Mn, Al) in liver samples from 78 lowland pacas (Cuniculus paca) hunted for subsistence in an oil-polluted area from the northern Peruvian Amazon where oil has been extracted since the 1970s (n = 38), and two control areas, the Yavari-Mirín River basin (n = 20), and the Pucacuro River basin (n = 20). Pacas in the oil-polluted area have significantly higher concentrations of Cd (P < 0.01) and Ba (P < 0.0001) compared to those in control areas, suggesting bioaccumulation of oil-related pollution. Conversely, Se levels were significantly lower in the oil-polluted area (P < 0.0001), likely due to the sequestration of Se by other heavy metals, particularly Cd. Additionally, minor variations in other heavy metals, e.g., Fe and Zn, were observed in pacas from the oil-polluted area, whereas control areas showed higher concentrations of Ni and Cu. Mn and Al levels did not significantly differ between the study areas. These results underscore the impact of oil extraction on the absorption and assimilation of heavy metals in wildlife, point at oil activities as the source of the high and unsafe blood Cd levels reported for the indigenous population of the studied oil extraction area and raise concerns about the long-term health risks from oil extraction posed to local Indigenous People who rely on subsistence hunting.


Subject(s)
Environmental Monitoring , Metals, Heavy , Metals, Heavy/analysis , Peru , Animals , Hydrocarbons/analysis , Petroleum Pollution , Water Pollutants, Chemical/analysis
13.
Chemosphere ; 357: 142057, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38636920

ABSTRACT

Recent leaks of underground fuel storage tanks in the Pearl Harbor region have led to direct release of un-weathered petroleum hydrocarbons (PHCs) into drinking water sources, which then directly underwent chlorination disinfection treatment. Since the control of disinfection byproducts (DBPs) traditionally focuses natural organic matters (NOM) from source water and little is known about the interactions between free chlorine and un-weathered PHCs, laboratory chlorination experiments in batch reactors were conducted to determine the formation potential of DBPs during chlorination of PHC-contaminated drinking water. Quantitative analysis of regulated DBPs showed that significant quantities of THM4 (average 3,498 µg/L) and HAA5 (average 355.4 µg/L) compounds were formed as the result of chlorination of un-weathered PHCs. Amongst the regulated DBPs, THM4, which were comprised primarily of chloroform and bromodichloromethane, were more abundant than HAA5. Numerous unregulated DBPs and a large diversity of unidentified potentially halogenated organic compounds were also produced, with the most abundant being 1,1-dichloroacetone, 1,2-dibromo-3-chloropropane, chloropicrin, dichloroacetonitrile, and trichloracetonitrile. Together, the results demonstrated the DBP formation potential when PHC-contaminated water undergoes chlorination treatment. Further studies are needed to confirm the regulated DBP production and health risks under field relevant conditions.


Subject(s)
Disinfection , Drinking Water , Halogenation , Hydrocarbons , Petroleum , Water Pollutants, Chemical , Water Purification , Water Pollutants, Chemical/analysis , Water Pollutants, Chemical/chemistry , Drinking Water/chemistry , Water Purification/methods , Petroleum/analysis , Hydrocarbons/analysis , Disinfectants/analysis , Disinfectants/chemistry , Chlorine/chemistry , Trihalomethanes/analysis , Trihalomethanes/chemistry
14.
Anal Methods ; 16(18): 2938-2947, 2024 May 09.
Article in English | MEDLINE | ID: mdl-38668806

ABSTRACT

The nature and proportions of hydrocarbons in the cuticle of insects are characteristic of the species and age. Chemical analysis of cuticular hydrocarbons allows species discrimination, which is of great interest in the forensic field, where insects play a crucial role in estimating the minimum post-mortem interval. The objective of this work was the differentiation of Diptera order insects through their saturated cuticular hydrocarbon compositions (SCHCs). For this, specimens fixed in 70 : 30 ethanol : water, as recommended by the European Association for Forensic Entomology, were submitted to solid-liquid extraction followed by dispersive liquid-liquid microextraction, providing preconcentration factors up to 76 for the SCHCs. The final organic extract was analysed by gas chromatography coupled with flame ionization detection (GC-FID), and GC coupled with mass spectrometry was applied to confirm the identity of the SCHCs. The analysed samples contained linear alkanes with the number of carbon atoms in the C9-C15 and C18-C36 ranges with concentrations between 0.1 and 125 ng g-1. Chrysomya albiceps (in its larval stage) showed the highest number of analytes detected, with 21 compounds, while Lucilia sericata and Calliphora vicina the lowest, with only 3 alkanes. Non-supervised principal component analysis and supervised orthogonal partial least squares discriminant analysis were performed and an optimal model to differentiate specimens according to their species was obtained. In addition, statistically significant differences were observed in the concentrations of certain SCHCs within the same species depending on the stage of development or the growth pattern of the insect.


Subject(s)
Diptera , Gas Chromatography-Mass Spectrometry , Hydrocarbons , Animals , Hydrocarbons/analysis , Diptera/chemistry , Gas Chromatography-Mass Spectrometry/methods , Liquid Phase Microextraction/methods , Forensic Entomology/methods , Principal Component Analysis , Discriminant Analysis
15.
Environ Sci Pollut Res Int ; 31(21): 30867-30885, 2024 May.
Article in English | MEDLINE | ID: mdl-38622422

ABSTRACT

Escalating oil consumption has resulted in an increase in accidental spills of petroleum hydrocarbons, causing severe environmental degradation, notably in vulnerable regions like the Niger Delta. Complex mixture of these hydrocarbons particularly long-chain alkanes presents unique challenges in restoration of polluted environment due to their chemical properties. This study aimed to investigate the long-chain hydrocarbon-degrading bacterial communities within long-term chronically polluted soil in Ogoniland, by utilizing both traditional cultivation methods and modern culture-independent techniques. Results revealed that surface-polluted soil (SPS) and subsurface soil (SPSS) exhibit significantly higher total organic carbon (TOC) ranging from 5.64 to 5.06% and total petroleum hydrocarbons (TPH) levels ranging from 36,775 ppm to 14,087 ppm, compared to unpolluted soil (UPS) with 1.97% TOC and 479 ppm TPH, respectively. Analysis of carbon chain lengths reveals the prevalence of longer-chain alkanes (C20-28) in the surface soil. Culture-dependent methods, utilizing crude oil enrichment (COE) and paraffin wax enrichment (PWE), yield 47 bacterial isolates subjected to a long-chain alkane degradation assay. Twelve bacterial strains demonstrate significant degradation abilities across all enriched media. Three bacterial members, namely Pseudomonas sp. (almA), Marinomonas sp. (almA), and Alteromonas (ladA), exhibit genes responsible for long-chain alkane degradation, demonstrating efficiency between 50 and 80%. Culture-independent analysis reveals that surface SPS samples exhibit greater species richness and diversity compared to subsurface SPSS samples. Proteobacteria dominates as the phylum in both soil sample types, ranging from 22.23 to 82.61%, with Firmicutes (0.2-2.22%), Actinobacteria (0.4-3.02%), and Acidobacteria (0.1-3.53%) also prevalent. Bacterial profiles at genus level revealed that distinct variations among bacterial populations between SPS and SPSS samples comprising number of hydrocarbon degraders and the functional predictions also highlight the presence of potential catabolic genes (nahAa, adh2, and cpnA) in the polluted soil. However, culture-dependent analysis only captured a few of the dominant members found in culture-independent analysis, implying that more specialized media or environments are needed to isolate more bacterial members. The findings from this study contribute valuable information to ecological and biotechnological aspects, aiding in the development of more effective bioremediation applications for restoring oil-contaminated environments.


Subject(s)
Bacteria , Biodegradation, Environmental , Hydrocarbons , Soil Microbiology , Soil Pollutants , Soil , Soil Pollutants/metabolism , Hydrocarbons/metabolism , Bacteria/metabolism , Soil/chemistry , Petroleum/metabolism
16.
FEMS Microbiol Ecol ; 100(5)2024 Apr 10.
Article in English | MEDLINE | ID: mdl-38650064

ABSTRACT

With the increase in crude oil transport throughout Canada, the potential for spills into freshwater ecosystems has increased and additional research is needed in these sensitive environments. Large enclosures erected in a lake were used as mesocosms for this controlled experimental dilbit (diluted bitumen) spill under ambient environmental conditions. The microbial response to dilbit, the efficacy of standard remediation protocols on different shoreline types commonly found in Canadian freshwater lakes, including a testing of a shoreline washing agent were all evaluated. We found that the native microbial community did not undergo any significant shifts in composition after exposure to dilbit or the ensuing remediation treatments. Regardless of the treatment, sample type (soil, sediment, or water), or type of associated shoreline, the community remained relatively consistent over a 3-month monitoring period. Following this, metagenomic analysis of polycyclic aromatic and alkane hydrocarbon degradation mechanisms also showed that while many key genes identified in PAH and alkane biodegradation were present, their abundance did not change significantly over the course of the experiment. These results showed that the native microbial community present in a pristine freshwater lake has the prerequisite mechanisms for hydrocarbon degradation in place, and combined with standard remediation practices in use in Canada, has the genetic potential and resilience to potentially undertake bioremediation.


Subject(s)
Biodegradation, Environmental , Hydrocarbons , Lakes , Petroleum Pollution , Lakes/microbiology , Canada , Hydrocarbons/metabolism , Microbiota , Water Pollutants, Chemical/metabolism , Bacteria/genetics , Bacteria/metabolism , Bacteria/classification , Polycyclic Aromatic Hydrocarbons/metabolism , Geologic Sediments/microbiology , Fresh Water/microbiology , Metagenomics
17.
Chemosphere ; 356: 141914, 2024 May.
Article in English | MEDLINE | ID: mdl-38588899

ABSTRACT

In this study, electrokinetically-delivered persulfate (PS) coupled with thermal conductive heating (TCH) method was proposed for the remediation of petroleum hydrocarbons (PHs) contaminated low-permeability soil, based on the investigation of PS injection and activation by different electric field form, effective heating radius of TCH to activate PS, and their influencing factors. The uniform delivery and effective activation of PS were unrealizable by one-dimensional electric field (1 V/cm) with the operation of cathode injection, anode injection, bipolar injection, polarity-reversal, or bipolar injection coupled polarity-reversal, which would result in large spatial difference of soil pH and PHs residual. Similar results were obtained under the two-dimensional symmetric electric field (TEF) due to the large spatial difference in electric field intensity. Superimposed electric field (SEF, 1 V/cm) that based on the intermittent worked electrode groups coupled with polarity-reversal (every 3 h) and bipolar injection (10% PS solution) operation could achieve homogenized mass transfer of PS (53.8-65.7 g/kg, average 60.0 g/kg) in 15 days, due to the positive correlation between electric field intensity and transport of ionic substance. Meanwhile, the difference in decontamination efficiency caused by difference in PS activation efficiency could be reduced, since the heating rod was placed at the position where the concentrations of PS was the lowest, whereat the removal of PHs could not rely on alkali activated PS (cathode), anodic oxidation (anode), and electrochemical activated PS (cathode and anode). The residual concentration of PHs in soil remediated by SEF/PS-TCH was in the range of 640.7-763.8 mg/kg (average 701.5 mg/kg), and the corresponding removal efficiency was 73.3%-77.6% (average75.4%). The research can provide an in-situ remediation method for organic contaminants in low permeability soil featured with more uniform PS injection and activation, and small spatial differences in remediation efficiency.


Subject(s)
Environmental Restoration and Remediation , Hydrocarbons , Petroleum , Soil Pollutants , Environmental Restoration and Remediation/methods , Hydrocarbons/chemistry , Soil Pollutants/chemistry , Soil/chemistry , Sulfates/chemistry , Permeability , Electrodes , Heating
18.
Environ Sci Pollut Res Int ; 31(20): 29902-29915, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38594561

ABSTRACT

Bioremediation is an economically viable and sustainable clean-up strategy. Hydrodynamic, as well as transport characteristics of the porous medium, can evolve over the period as a result of biological clean-up activities. The present study proposes a 2-D numerical framework to simulate the effect of bioclogging on multiple electron acceptor-mediated petroleum hydrocarbon bioremediation in the vadose zone. For modelling, a spill of BTEX (benzene, toluene, ethylbenzene and xylene) is assumed near source zone. The developed model results are validated using three previously published datasets on flow, transport and biodegradation in the vadose zone. Simulations are performed for three types of soil, including clay, sand and loam. The analysis shows that sand has a maximum infiltration rate and clay has a minimum. Hydraulic conductivity and saturation profile peaks reach their minimal value at a shallower depth (around four times) when bioclogging is present compared to when it is absent. The migration depth and concentration of BTEX are observed to be restricted to a shallower depth in aquifers with the presence of microbial clogging. The outcome shows that electron acceptor consumption is more (around sevenfold for oxygen, fourfold for nitrate and threefold for sulphate) in the presence of bioclogging at the shallower zone. Zeroth order spatial moment and sensitivity analyses show that biological clogging, number of electron acceptors and inhibition constant substantially affect BTEX bioremediation in the vadose zone.


Subject(s)
Biodegradation, Environmental , Hydrocarbons , Petroleum , Petroleum/metabolism , Hydrocarbons/metabolism , Soil Pollutants/metabolism , Soil/chemistry , Models, Theoretical , Electrons
19.
Sci Total Environ ; 929: 172478, 2024 Jun 15.
Article in English | MEDLINE | ID: mdl-38621545

ABSTRACT

Biostimulation by supplementing of nitrogen and phosphorus nutrients is a common strategy for remediation of petroleum-polluted soils. However, the dosage influence of exogenous nitrogen or phosphorus on petroleum hydrocarbon removal and soil ecotoxicity and microbial function remain unclear. In this study, we compared the efficiencies of hydrocarbon degradation and ecotoxicity control by experiment conducted over addition of inorganic nitrogen or phosphorus at C/N ratio of 100/10, C/N/P ratio of 100/10/1, and C/P ratio of 100/1 in a heavily petroleum-contaminated loessal soil with 12,320 mg/kg of total petroleum hydrocarbon (TPH) content. A 90-day incubation study revealed that low-dose of phosphorus addition with the C/P ratio of 100/1 promoted hydrocarbon degradation and reduced soil ecotoxicity. Microbial community composition analysis suggested that phosphorus addition enriched hydrocarbon degrader Gordonia and Mycolicibacterium genus. The key enzymes EC 5.3.3.8, EC 6.2.1.20 and EC 6.4.1.1 which referred to degradation of long-chain hydrocarbons, unsaturated fatty acids and pyruvate metabolism were abundance by phosphorus supplementation. While nitrogen addition at C/N ratio of 100/10 or C/N/P ratio of 100/10/1 inhibited hydrocarbon degradation and exacerbated soil ecotoxicity due to promoting denitrification and coupling reactions with hydrocarbons. Our results suggested that low-dose phosphorus addition served as a favorable strategy to promote crude oil remediation and ecotoxicity risk control in heavily petroleum-contaminated soil. Hence, the application of suitable doses of exogenous biostimulants is an efficient approach to restore the ecological functions of organically contaminated soils.


Subject(s)
Biodegradation, Environmental , Hydrocarbons , Petroleum , Phosphorus , Soil Microbiology , Soil Pollutants , Soil , Soil/chemistry , Environmental Restoration and Remediation/methods , Petroleum Pollution , Nitrogen
20.
Naturwissenschaften ; 111(3): 24, 2024 Apr 18.
Article in English | MEDLINE | ID: mdl-38634907

ABSTRACT

When an insect walks, it leaves chemical cues that derive from the arolium, a tarsal structure. These cues may contain important information about other species that occur in their community and can then mediate interactions of competition, predation, and information about resources with ants from their own colony. The compounds of these cues are released into the substrate in the form of chemical footprints. There are still few species studied, and little is known about the behavior of ants regarding these signals and how they use them in their interactions. Therefore, the aim of this study was to assess the behavioral strategy of different ant species when confronted with chemical footprints left by other ants, as well as identify their compounds and their relationship with the cuticular hydrocarbon profile. The experiments were performed using a Y-maze, where in one of the arms, there were chemical footprints of their own species or of other species, and the other Y arm was footprint-free. The chemical compounds of footprints and cuticle were analyzed by gas chromatography-mass spectrometry. The results show that foragers of all species detect and respond to the presence of chemical cues in the form of footprints left by other ants. Foragers of all species followed footprints of individuals of the same species both nestmates and non-nestmates; however, Neoponera villosa avoided the footprints of Cephalotes borgmeieri, and C. borgmeieri avoided the footprints of the other two species. The chemical compositions of the cuticle and footprints are related to each other and are specific to each species.


Subject(s)
Ants , Humans , Animals , Predatory Behavior , Cues , Gas Chromatography-Mass Spectrometry , Hydrocarbons
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