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1.
Cell Death Dis ; 12(10): 921, 2021 10 08.
Article in English | MEDLINE | ID: mdl-34625532

ABSTRACT

Chronic kidney disease (CKD) is characterized by the gradual loss of renal function and is a major public health concern. Risk factors for CKD include hypertension and proteinuria, both of which are associated with endoplasmic reticulum (ER) stress. ER stress-induced TDAG51 protein expression is increased at an early time point in mice with CKD. Based on these findings, wild-type and TDAG51 knock-out (TDKO) mice were used in an angiotensin II/deoxycorticosterone acetate/salt model of CKD. Both wild-type and TDKO mice developed hypertension, increased proteinuria and albuminuria, glomerular injury, and tubular damage. However, TDKO mice were protected from apoptosis and renal interstitial fibrosis. Human proximal tubular cells were used to demonstrate that TDAG51 expression induces apoptosis through a CHOP-dependent mechanism. Further, a mouse model of intrinsic acute kidney injury demonstrated that CHOP is required for ER stress-mediated apoptosis. Renal fibroblasts were used to demonstrate that TGF-ß induces collagen production through an IRE1-dependent mechanism; cells treated with a TGF-ß receptor 1 inhibitor prevented XBP1 splicing, a downstream consequence of IRE1 activation. Interestingly, TDKO mice express significantly less TGF-ß receptor 1, thus, preventing TGF-ß-mediated XBP1 splicing. In conclusion, TDAG51 induces apoptosis in the kidney through a CHOP-dependent mechanism, while contributing to renal interstitial fibrosis through a TGF-ß-IRE1-XBP1 pathway.


Subject(s)
Kidney/pathology , Receptor, Transforming Growth Factor-beta Type I/metabolism , Renal Insufficiency, Chronic/metabolism , Renal Insufficiency, Chronic/pathology , Transcription Factors/metabolism , Animals , Apoptosis/drug effects , Blood Pressure/drug effects , Cell Line , Fibroblasts/drug effects , Fibroblasts/metabolism , Fibroblasts/pathology , Fibrosis , Humans , Hymecromone/analogs & derivatives , Hymecromone/pharmacology , Kidney/drug effects , Kidney/physiopathology , Kidney Glomerulus/drug effects , Kidney Glomerulus/pathology , Kidney Glomerulus/physiopathology , Kidney Tubules/drug effects , Kidney Tubules/pathology , Kidney Tubules/physiopathology , Mice, Inbred C57BL , Mice, Knockout , Models, Biological , Rats , Renal Insufficiency, Chronic/physiopathology , Risk Factors , Transcription Factor CHOP/metabolism , Tunicamycin/pharmacology , X-Box Binding Protein 1/metabolism
2.
Nat Commun ; 12(1): 5321, 2021 09 07.
Article in English | MEDLINE | ID: mdl-34493732

ABSTRACT

CARM1 is often overexpressed in human cancers including in ovarian cancer. However, therapeutic approaches based on CARM1 expression remain to be an unmet need. Cancer cells exploit adaptive responses such as the endoplasmic reticulum (ER) stress response for their survival through activating pathways such as the IRE1α/XBP1s pathway. Here, we report that CARM1-expressing ovarian cancer cells are selectively sensitive to inhibition of the IRE1α/XBP1s pathway. CARM1 regulates XBP1s target gene expression and directly interacts with XBP1s during ER stress response. Inhibition of the IRE1α/XBP1s pathway was effective against ovarian cancer in a CARM1-dependent manner both in vitro and in vivo in orthotopic and patient-derived xenograft models. In addition, IRE1α inhibitor B-I09 synergizes with immune checkpoint blockade anti-PD1 antibody in an immunocompetent CARM1-expressing ovarian cancer model. Our data show that pharmacological inhibition of the IRE1α/XBP1s pathway alone or in combination with immune checkpoint blockade represents a therapeutic strategy for CARM1-expressing cancers.


Subject(s)
Carcinoma, Ovarian Epithelial/therapy , Endoribonucleases/genetics , Ovarian Neoplasms/therapy , Programmed Cell Death 1 Receptor/genetics , Protein Serine-Threonine Kinases/genetics , Protein-Arginine N-Methyltransferases/genetics , X-Box Binding Protein 1/genetics , Animals , Antibodies, Monoclonal/pharmacology , Base Sequence , Benzopyrans/pharmacology , Carcinoma, Ovarian Epithelial/genetics , Carcinoma, Ovarian Epithelial/immunology , Carcinoma, Ovarian Epithelial/pathology , Cell Line, Tumor , Endoplasmic Reticulum Stress/drug effects , Endoribonucleases/antagonists & inhibitors , Endoribonucleases/immunology , Female , Gene Expression Regulation, Neoplastic , Humans , Hymecromone/analogs & derivatives , Hymecromone/pharmacology , Immune Checkpoint Inhibitors , Mice , Molecular Targeted Therapy , Ovarian Neoplasms/genetics , Ovarian Neoplasms/immunology , Ovarian Neoplasms/pathology , Programmed Cell Death 1 Receptor/antagonists & inhibitors , Programmed Cell Death 1 Receptor/immunology , Protein Binding , Protein Serine-Threonine Kinases/antagonists & inhibitors , Protein Serine-Threonine Kinases/immunology , Protein-Arginine N-Methyltransferases/antagonists & inhibitors , Protein-Arginine N-Methyltransferases/immunology , Signal Transduction , X-Box Binding Protein 1/antagonists & inhibitors , X-Box Binding Protein 1/immunology , Xenograft Model Antitumor Assays
3.
Cell Mol Biol Lett ; 26(1): 11, 2021 Mar 17.
Article in English | MEDLINE | ID: mdl-33730996

ABSTRACT

Inositol requiring enzyme 1 alpha (IRE1α) is one of three signaling sensors in the unfolding protein response (UPR) that alleviates endoplasmic reticulum (ER) stress in cells and functions to promote cell survival. During conditions of irrevocable stress, proapoptotic gene expression is induced to promote cell death. One of the three signaling stressors, IRE1α is an serine/threonine-protein kinase/endoribonuclease (RNase) that promotes nonconventional splicing of XBP1 mRNA that is translated to spliced XBP1 (XBP1s), an active prosurvival transcription factor. Interestingly, elevated IRE1α and XBP1s are both associated with poor cancer survival and drug resistance. In this study, we used next-generation sequencing analyses to demonstrate that triazoloacridone C-1305, a microtubule stabilizing agent that also has topoisomerase II inhibitory activity, dramatically decreases XBP1s mRNA levels and protein production during ER stress conditions, suggesting that C-1305 does this by decreasing IRE1α's endonuclease activity.


Subject(s)
Acridines/pharmacology , Endoribonucleases/antagonists & inhibitors , Protein Serine-Threonine Kinases/antagonists & inhibitors , RNA Splicing/genetics , Triazoles/pharmacology , X-Box Binding Protein 1/genetics , Acridines/chemistry , Cell Line , Endoplasmic Reticulum Stress/drug effects , Humans , Hymecromone/analogs & derivatives , Hymecromone/chemistry , Hymecromone/pharmacology , RNA Splicing/drug effects , RNA, Messenger/genetics , RNA, Messenger/metabolism , Triazoles/chemistry
4.
Immunohorizons ; 5(3): 135-146, 2021 03 08.
Article in English | MEDLINE | ID: mdl-33685907

ABSTRACT

The ability to modulate direct MHC class I (MHC I) Ag presentation is a desirable goal for the treatment of a variety of conditions, including autoimmune diseases, chronic viral infections, and cancers. It is therefore necessary to understand how changes in the cellular environment alter the cells' ability to present peptides to T cells. The unfolded protein response (UPR) is a signaling pathway activated by the presence of excess unfolded proteins in the endoplasmic reticulum. Previous studies have indicated that chemical induction of the UPR decreases direct MHC I Ag presentation, but the precise mechanisms are unknown. In this study, we used a variety of small molecule modulators of different UPR signaling pathways to query which UPR signaling pathways can alter Ag presentation in both murine and human cells. When signaling through the PERK pathway, and subsequent eIF2α phosphorylation, was blocked by treatment with GSK2656157, MHC I Ag presentation remain unchanged, whereas treatment with salubrinal, which has the opposite effect of GSK2656157, decreases both Ag presentation and overall cell-surface MHC I levels. Treatment with 4µ8C, an inhibitor of the IRE1α UPR activation pathway that blocks splicing of Xbp1 mRNA, also diminished MHC I Ag presentation. However, 4µ8C treatment unexpectedly led to an increase in eIF2α phosphorylation in addition to blocking IRE1α signaling. Given that salubrinal and 4µ8C lead to eIF2α phosphorylation and similar decreases in Ag presentation, we conclude that UPR signaling through PERK, leading to eIF2α phosphorylation, results in a modest decrease in direct MHC I Ag presentation.


Subject(s)
Adenine/analogs & derivatives , Endoribonucleases/metabolism , Eukaryotic Initiation Factor-2/metabolism , Indoles/pharmacology , Protein Serine-Threonine Kinases/metabolism , Unfolded Protein Response , Adenine/pharmacology , Animals , Antigen Presentation/drug effects , Cell Line , Cinnamates/pharmacology , Eukaryotic Initiation Factor-2/antagonists & inhibitors , Humans , Hymecromone/analogs & derivatives , Hymecromone/pharmacology , Mice , Phosphorylation , RNA, Messenger/genetics , Signal Transduction/drug effects , Thiourea/analogs & derivatives , Thiourea/pharmacology , X-Box Binding Protein 1/metabolism
5.
Pharm Res ; 38(3): 397-413, 2021 Mar.
Article in English | MEDLINE | ID: mdl-33655394

ABSTRACT

PURPOSE: Hydrolytic degradation of polysorbate during 2-8°C storage of monoclonal antibody drug products has been attributed to residual enzymes (e.g., esterases) from bioprocessing steps. Robust detection of esterase activity using sensitive, non-polysorbate surrogate substrates can provide an alternate method to assess polysorbate degradation risk, if the correlation between the esterase activity and polysorbate degradation is established. METHODS: A general esterase activity assay was developed as a monitoring and characterization tool during bioprocess development of monoclonal antibodies. RESULTS: We report a fluorescence plate-based assay for quantifying esterase activity, utilizing 4-methylumbelliferyl caprylate (MU-C8) as the esterase substrate. The assay was first assessed for substrate, inhibitor and pH specificity using both model enzymes and purified protein samples. The assay was then extensively tested to understand sample matrix effects on activity rates. CONCLUSIONS: The use of this high-throughput method will allow for rapid characterization of protein samples in under three hours. The esterase activity correlated directly with polysorbate degradation and can provide valuable information on polysorbate degradation risk throughout drug development.


Subject(s)
Esterases/metabolism , Polysorbates/chemistry , Biosensing Techniques , Enzyme Activation , High-Throughput Screening Assays , Hydrolysis , Hymecromone/analogs & derivatives , Hymecromone/chemistry , Models, Chemical , Risk Assessment , Spectrometry, Fluorescence , Substrate Specificity
6.
BMC Plant Biol ; 21(1): 66, 2021 Jan 29.
Article in English | MEDLINE | ID: mdl-33514320

ABSTRACT

BACKGROUND: Glutamine synthetase (GS) acts as a key enzyme in plant nitrogen (N) metabolism. It is important to understand the regulation of GS expression in plant. Promoters can initiate the transcription of its downstream gene. Eichhornia crassipes is a most prominent aquatic invasive plant, which has negative effects on environment and economic development. It also can be used in the bioremediation of pollutants present in water and the production of feeding and energy fuel. So identification and characterization of GS promoter in E. crassipes can help to elucidate its regulation mechanism of GS expression and further to control its N metabolism. RESULTS: A 1232 bp genomic fragment upstream of EcGS1b sequence from E. crassipes (EcGS1b-P) has been cloned, analyzed and functionally characterized. TSSP-TCM software and PlantCARE analysis showed a TATA-box core element, a CAAT-box, root specific expression element, light regulation elements including chs-CMA1a, Box I, and Sp1 and other cis-acting elements in the sequence. Three 5'-deletion fragments of EcGS1b upstream sequence with 400 bp, 600 bp and 900 bp length and the 1232 bp fragment were used to drive the expression of ß-glucuronidase (GUS) in tobacco. The quantitative test revealed that GUS activity decreased with the decreasing of the promoter length, which indicated that there were no negative regulated elements in the EcGS1-P. The GUS expressions of EcGS1b-P in roots were significantly higher than those in leaves and stems, indicating EcGS1b-P to be a root-preferential promoter. Real-time Quantitative Reverse Transcription-Polymerase Chain Reaction (qRT-PCR) analysis of EcGS1b gene also showed higher expression in the roots of E.crassipes than in stems and leaves. CONCLUSIONS: EcGS1b-P is a root-preferential promoter sequence. It can specifically drive the transcription of its downstream gene in root. This study will help to elucidate the regulatory mechanisms of EcGS1b tissue-specific expression and further study its other regulatory mechanisms in order to utilize E.crassipes in remediation of eutrophic water and control its overgrowth from the point of nutrient metabolism.


Subject(s)
Eichhornia/enzymology , Eichhornia/genetics , Glutamate-Ammonia Ligase/genetics , Plant Roots/genetics , Promoter Regions, Genetic , Base Sequence , Cloning, Molecular , DNA, Plant , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Hymecromone/analogs & derivatives , Hymecromone/metabolism , Plant Roots/enzymology , Plants, Genetically Modified , Real-Time Polymerase Chain Reaction , Nicotiana/genetics
7.
Eur J Hum Genet ; 29(3): 434-446, 2021 03.
Article in English | MEDLINE | ID: mdl-33162552

ABSTRACT

Pompe disease is a lysosomal and neuromuscular disorder caused by deficiency of acid alpha-glucosidase (GAA), and causes classic infantile, childhood onset, or adulthood onset phenotypes. The biochemical diagnosis is based on GAA activity assays in dried blood spots, leukocytes, or fibroblasts. Diagnosis can be complicated by the existence of pseudodeficiencies, i.e., GAA variants that lower GAA activity but do not cause Pompe disease. A large-scale comparison between these assays for patient samples, including exceptions and borderline cases, along with clinical diagnoses has not been reported so far. Here we analyzed GAA activity in a total of 1709 diagnostic cases over the past 28 years using a total of 2591 analyses and we confirmed the clinical diagnosis in 174 patients. We compared the following assays: leukocytes using glycogen or 4MUG as substrate, fibroblasts using 4MUG as substrate, and dried blood spots using 4MUG as substrate. In 794 individuals, two or more assays were performed. We found that phenotypes could only be distinguished using fibroblasts with 4MUG as substrate. Pseudodeficiencies caused by the GAA2 allele could be ruled out using 4MUG rather than glycogen as substrate in leukocytes or fibroblasts. The Asian pseudodeficiency could only be ruled out in fibroblasts using 4MUG as substrate. We conclude that fibroblasts using 4MUG as substrate provides the most reliable assay for biochemical diagnosis and can serve to validate results from leukocytes or dried blood spots.


Subject(s)
Clinical Enzyme Tests/methods , Dried Blood Spot Testing/methods , Genetic Testing/methods , Glycogen Storage Disease Type II/genetics , Cells, Cultured , Clinical Enzyme Tests/statistics & numerical data , Dried Blood Spot Testing/statistics & numerical data , Fibroblasts/enzymology , Fibroblasts/metabolism , Genetic Testing/statistics & numerical data , Glycogen Storage Disease Type II/diagnosis , Glycogen Storage Disease Type II/metabolism , Humans , Hymecromone/analogs & derivatives , Hymecromone/metabolism , Leukocytes/enzymology , Leukocytes/metabolism , Mutation , alpha-Glucosidases/genetics , alpha-Glucosidases/metabolism
8.
Macromol Biosci ; 21(3): e2000342, 2021 03.
Article in English | MEDLINE | ID: mdl-33336880

ABSTRACT

The use of glycopolymer-functionalized resins (Resin-Glc), as a solid support, in column mode for bacterial/protein capture and quantification is explored. The Resin-Glc is synthesized from commercially available chloromethylated polystyrene resin and glycopolymer, and is characterized by fourier transform infrared spectroscopy, thermogravimetry, and elemental analysis. The percentage of glycopolymer functionalized on Resin-Glc is accounted to be 5 wt%. The ability of Resin-Glc to selectively capture lectin, Concanavalin A, over Peanut Agglutinin, reversibly, is demonstrated for six cycles of experiments. The bacterial sequestration study using SYBR (Synergy Brands, Inc.) Green I tagged Escherichia coli/Staphylococcus aureus reveals the ability of Resin-Glc to selectively capture E. coli over S. aureus. The quantification of captured cells in the column is carried out by enzymatic colorimetric assay using methylumbelliferyl glucuronide as the substrate. The E. coli capture studies reveal a consistent capture efficiency of 105  CFU (Colony Forming Units) g-1 over six cycles. Studies with spiked tap water samples show satisfactory results for E. coli cell densities ranging from 102 to 107  CFU mL-1 . The method portrayed can serve as a basis for the development of a reusable solid support in capture and detection of proteins and bacteria.


Subject(s)
Biochemistry/methods , Escherichia coli/isolation & purification , Polymers/chemistry , Polysaccharides/chemistry , Proteins/isolation & purification , Resins, Synthetic/chemistry , Calibration , Carbohydrate Conformation , Glucuronidase/metabolism , Hymecromone/analogs & derivatives , Hymecromone/metabolism , Kinetics , Lectins/chemistry , Limit of Detection , Polymers/chemical synthesis , Polysaccharides/chemical synthesis , Spectroscopy, Fourier Transform Infrared , Water Microbiology
9.
Elife ; 92020 10 26.
Article in English | MEDLINE | ID: mdl-33103995

ABSTRACT

Hepatocellular carcinoma (HCC) is a liver tumor that usually arises in patients with cirrhosis. Hepatic stellate cells are key players in the progression of HCC, as they create a fibrotic micro-environment and produce growth factors and cytokines that enhance tumor cell proliferation and migration. We assessed the role of endoplasmic reticulum (ER) stress in the cross-talk between stellate cells and HCC cells. Mice with a fibrotic HCC were treated with the IRE1α-inhibitor 4µ8C, which reduced tumor burden and collagen deposition. By co-culturing HCC-cells with stellate cells, we found that HCC-cells activate IREα in stellate cells, thereby contributing to their activation. Inhibiting IRE1α blocked stellate cell activation, which then decreased proliferation and migration of tumor cells in different in vitro 2D and 3D co-cultures. In addition, we also observed cell-line-specific direct effects of inhibiting IRE1α in tumor cells.


Subject(s)
Antineoplastic Agents/pharmacology , Endoribonucleases/antagonists & inhibitors , Endoribonucleases/metabolism , Hymecromone/analogs & derivatives , Protein Serine-Threonine Kinases/antagonists & inhibitors , Protein Serine-Threonine Kinases/metabolism , Animals , Carcinoma, Hepatocellular , Cell Line, Tumor , Cell Proliferation , Chemotaxis , Coculture Techniques , Endoribonucleases/genetics , Humans , Hymecromone/pharmacology , Liver Neoplasms , Liver Neoplasms, Experimental , Male , Mice , Protein Serine-Threonine Kinases/genetics , Tissue Scaffolds
10.
Anal Chim Acta ; 1125: 288-298, 2020 Aug 15.
Article in English | MEDLINE | ID: mdl-32674775

ABSTRACT

Xenoestrogens exert antiandrogenic effects on the human androgen receptor. In the analytical field, such antagonists block the detection of testosterone and falsify results obtained by sum parameter assays. Currently, such agonistic versus antagonistic effects are not differentiated in complex mixtures. Oppositely acting hormonal effects present in products of everyday use can only be differentiated after tedious fractionation and isolation of the individual compounds along with subjection of each fraction/compound to the status quo bioassay testing. However, such long-lasting procedures are not suited for routine. Hence, we developed a fast bioanalytical tool that figures out agonists versus antagonists directly in complex mixtures. Exemplarily, 8 cosmetics and 15 thermal papers were analyzed. The determined antagonistic potentials of active compounds found were comparable to the ones of known antagonists (in reference shown for bisphenol A, 4-n-nonylphenol and four parabens). Relevant biological/chromatographic parameters such as cell viability, culture conditions, dose response curves, limits of biological detection/quantification and working range (shown for testosterone, dihydrotestosterone, nandrolone and trenbolone) were investigated to obtain the best sensitivity of the biological detection. The developed and validated method was newly termed reversed phase high-performance thin-layer chromatography planar yeast ant-/agonistic androgen screen (RP-HPTLC-pYAAS bioassay). Results were also compared with the RP-HPTLC-Aliivibrio fischeri bioassay (applied on RP plates for the first time). As proof-of-concept, the transfer to another bioassay (RP-HPTLC-pYES) was successfully demonstrated, analogously termed RP-HPTLC-pYAES bioassay detecting anti-/estrogens (exemplarily shown for evaluation of 4 pharmaceuticals used in breast cancer treatment). The new imaging concept provides (1) detection and differentiation of individual agonistic versus antagonistic effects in the bioprofiles, (2) bioanalytical quantification of their activity potential by scanning densitometry and (3) characterization of unknown bioactive compound zones by hyphenation to high-resolution mass spectrometry. Depending on the hormonal bioassay, 15 samples were analyzed in parallel within 5 h or 6 h (calculated as 20 or 24 min per sample). For the first time, piezoelectric spraying of the yeast cells was successfully demonstrated for the planar yeast-based bioassays.


Subject(s)
Androgen Receptor Antagonists/analysis , Androgens/analysis , Biological Assay/methods , Cosmetics/analysis , Endocrine Disruptors/analysis , Aliivibrio fischeri/drug effects , Anti-Bacterial Agents/analysis , Benzhydryl Compounds/analysis , Chromatography, Reverse-Phase/methods , Chromatography, Thin Layer/methods , Fluorescent Dyes/chemistry , Galactosides/chemistry , Humans , Hymecromone/analogs & derivatives , Hymecromone/chemistry , Limit of Detection , Paper , Phenols/analysis , Proof of Concept Study , Receptors, Androgen/genetics , Saccharomyces cerevisiae/genetics , beta-Galactosidase/chemistry
11.
J Mol Model ; 26(6): 122, 2020 May 08.
Article in English | MEDLINE | ID: mdl-32383051

ABSTRACT

Bacillus thermocatenulatus lipase (BTL2), a member of the isolated lipase family known as thermoalkalophilic lipases, carries potential for industrial applications owing to its ability to catalyze versatile reactions under extreme conditions. This study investigates the molecular effects of distinct solvents on the stability of BTL2 at different temperatures, aiming to contribute to lipase use in industrial applications. Initially, molecular dynamic (MD) simulations were carried out to address for the molecular impacts of distinct solvents on the structural stability of BTL2 at different temperatures. Two lipase conformations representing the active and inactive forms were simulated in 5 solvents including water, ethanol, methanol, cyclohexane, and toluene. Low temperature simulations showed that polar solvents led to enhanced lid fluctuations compared with non-polar solvents reflecting a more dynamic equilibrium between active and inactive lipase conformations in polar solvents including water, while the overall structure of the lipase in both forms became more rigid in non-polar solvents than they were in polar solvent. Notably, the native lipase fold was maintained in non-polar solvents even at high temperatures, indicating an enhancement of lipase's thermostability in non-polar organic solvents. Next, we conducted experiments for which BTL2 was expressed in a heterologous host and purified to homogeneity, and its thermostability in different solvents was assessed. Parallel to the computational findings, experimental results suggested that non-polar organic solvents contributed to BTL2's thermostability at concentrations as high as 70% (v/v). Altogether, this study provides beneficial insights to the lipase use under extreme conditions. Graphical Abstract.


Subject(s)
Geobacillus/enzymology , Lipase/chemistry , Lipase/metabolism , Molecular Dynamics Simulation , Solvents/chemistry , Temperature , 2-Propanol/chemistry , Acetone/chemistry , Bacterial Proteins/chemistry , Catalytic Domain , Cyclohexanes/chemistry , Enzyme Stability , Ethanol/chemistry , Hymecromone/analogs & derivatives , Hymecromone/metabolism , Methanol/chemistry , Protein Conformation , Toluene/chemistry
12.
J Mol Neurosci ; 70(7): 1100-1109, 2020 Jul.
Article in English | MEDLINE | ID: mdl-32125626

ABSTRACT

Pompe disease, a rare, autosomal, recessive, inherited, lysosomal storage disorder, is caused by mutations in the acid α-glucosidase (GAA) gene leading to a deficiency of the lysosomal GAA enzyme. Some GAA mutations eliminate all enzymatic activities, causing severe infantile Pompe disease; others allow residual GAA activity and lead to middle adulthood forms. Here, we report a cohort of 12 patients, belonging to 11 unrelated families, with infantile Pompe disease. The mutational analysis of GAA gene revealed a novel c.1494G > A (p.Trp498X) mutation in one patient and three known mutatio,ns including the c.1497G > A (p.Trp499X) mutation, in two patients, the c.1927G > A (p.Gly643Arg) mutation in one patient and the common c.236_246del (p.Pro79ArgfsX13) mutation in eight patients. The high prevalence of c.236_246del mutation in our cohort (58%) was supported by the existence of a common founder ancestor that was confirmed by its segregation of similar SNPs haplotype, including four intragenic SNPs of GAA gene. In addition, a 3D structure model and a docking were generated for the mutant p.Gly643Arg using the crystal structure of human GAA as template and the 4-methylumbelliferyl-α-D-glucopyranoside as substrate. The results showed that the arginine at position 643 caused electrostatic changes in neighboring regions, leading to the repulsion between the amino acids located in the catalytic cavity of the GAA enzyme, thus restricting access to its substrate. These structural defects could cause the impairment of the transport and maturation previously reported for p.Gly643Arg mutation.


Subject(s)
Glycogen Storage Disease Type II/genetics , Mutation , alpha-Glucosidases/genetics , Catalytic Domain , Female , Glucosides/metabolism , Glycogen Storage Disease Type II/pathology , Humans , Hymecromone/analogs & derivatives , Hymecromone/metabolism , Infant , Male , Molecular Docking Simulation , Protein Binding , alpha-Glucosidases/chemistry , alpha-Glucosidases/metabolism
13.
Proteins ; 88(3): 440-448, 2020 03.
Article in English | MEDLINE | ID: mdl-31587363

ABSTRACT

Lysosomal acid lipase (LAL) plays an important role in lipid metabolism by performing hydrolysis of triglycerides and cholesteryl esters in the lysosome. Based upon characteristics of LAL purified from human liver, it has been proposed that LAL is a proprotein with a 55 residue propeptide that may be essential for proper folding, intracellular transport, or enzymatic function. However, the biological significance of such a propeptide has not been fully elucidated. In this study, we have performed a series of studies in cultured HepG2 and HeLa cells to determine the role of the putative propeptide. However, by Western blot analysis and subcellular fractionation, we have not been able to identify a cleaved LAL lacking the N-terminal 55 residues. Moreover, mutating residues surrounding the putative cleavage site at Lys76 ↓ in order to disrupt a proteinase recognition sequence, did not affect LAL activity. Furthermore, forcing cleavage at Lys76 ↓ by introducing the optimal furin cleavage site RRRR↓EL between residues 76 and 77, did not affect LAL activity. These data, in addition to bioinformatics analyses, indicate that LAL is not a proprotein. Thus, it is possible that the previously reported cleavage at Lys76 ↓ could have resulted from exposure to proteolytic enzymes during the multistep purification procedure.


Subject(s)
Hymecromone/analogs & derivatives , Lysosomes/enzymology , Sterol Esterase/chemistry , Amino Acid Sequence , Enzyme Assays , Gene Expression , HeLa Cells , Hep G2 Cells , Humans , Hymecromone/chemistry , Hymecromone/metabolism , Kinetics , Lysosomes/chemistry , Models, Molecular , Mutation , Plasmids/chemistry , Plasmids/metabolism , Protein Structure, Secondary , Proteolysis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Sterol Esterase/genetics , Sterol Esterase/metabolism , Substrate Specificity
14.
Ecotoxicol Environ Saf ; 189: 109954, 2020 Feb.
Article in English | MEDLINE | ID: mdl-31759743

ABSTRACT

Acetylcholinesterase (AChE) and general-esterase (GE) activities are important to understand detoxification processes of xenobiotics. The assays to quantify them have employed different substrates, inhibitors, types of experiments (in vitro and in vivo) and model organisms. The aim of this work was to give a systematic overview of the effect of the above factors on the outcome of AChE and GE activity measurements. We showed that AChE activity could be measured with the substrate acetylthiocholine iodide (AChI) but not with acetylcholine bromide (AChB) and only in in vitro assays. For GE activity, Michaelis-Menten kinetics differed between the substrates 4-methylumbellifery butyrate (4-MUB) and 1-naphtyl acetate (1-NA) in the measurements of in vitro activity, but their inhibition curves and IC50 values for the general inhibitor tetraisopropyl pyrophosphoramide (iso-OMPA) were similar, confirming that both substrates targeted the same group of enzymes. The GE substrate 4-MUB was applicable both in vitro and in vivo, while 1-NA was only applicable in vitro due to its high acute toxicity. When comparing the zooplankton crustacean Daphnia magna and the sediment dwelling Chironomus riparius, the latter had a four-fold higher maximal AChE activity (Vmax) and a higher susceptibility to the AChE inhibitor BW284c51 (four-fold lower 50% inhibitory concentration, IC50), but a lower maximal GE activity and lower susceptibility to iso-OMPA (higher IC50), indicating significant species differences between in C. riparius and D. magna. We conclude that both choice of substrate and exposure method matters for the outcome of esterase assays and that esterase compositions between species may vary significantly.


Subject(s)
Acetylcholinesterase/metabolism , Esterases/metabolism , Acetylthiocholine/analogs & derivatives , Acetylthiocholine/metabolism , Animals , Benzenaminium, 4,4'-(3-oxo-1,5-pentanediyl)bis(N,N-dimethyl-N-2-propenyl-), Dibromide/pharmacology , Chironomidae/drug effects , Chironomidae/enzymology , Cholinesterase Inhibitors/pharmacology , Daphnia/drug effects , Daphnia/enzymology , Enzyme Assays , Hymecromone/analogs & derivatives , Hymecromone/metabolism , Kinetics , Naphthols/metabolism , Xenobiotics/pharmacology
15.
Am J Respir Cell Mol Biol ; 61(4): 537-540, 2019 10.
Article in English | MEDLINE | ID: mdl-31573336
16.
Antiviral Res ; 169: 104542, 2019 09.
Article in English | MEDLINE | ID: mdl-31233807

ABSTRACT

An influenza A(H1N1)pdm09 and an influenza B virus were passaged in 3-fluoro(eq)-4-guanidino difluoro sialic acid (3Feq4Gu DFSA), an inhibitor of the influenza neuraminidase (NA) to determine whether resistant variants could be selected. 3Feq4Gu DFSA is a mechanism-based inhibitor, forming a covalent link to Y406 in the NA active site. Given its similarity to the natural substrate, sialic acid, we predicted resistant variants would be difficult to select. Yields of both viruses decreased with passaging, so that after 12 passages both viruses were only growing to low titers. Drug concentrations were decreased for another three passages. There was no difference in NA sensitivity in the MUNANA fluorescence-based assay, nor in plaque assays for the passaged virus stocks. All influenza B plaques were still wild type in all assays. There were isolated small diffuse plaques in the P15 pdm09 stock, which after purification had barely detectable NA or hemagglutinin (HA) activity. These had a novel non-active site I106M substitution in the NA gene, but unexpectedly no HA changes. The I106M may impact NA function through steric effects on the movement of the 150 and 430-loops. The I106M viruses had similar replication kinetics in MDCK cells as wild type viruses, but their ability to bind to and infect CHO-K1 cells expressing high levels of cell-bound mucin was compromised. The I106M substitution was unstable, with progeny rapidly reverting to wild type by three different mechanisms. Some had reverted to I106, some had V106, both with wild type NA and HA properties. A third group retained the I106M, but had a compensating R363K substitution, which regained almost wild type NA properties. These viruses now agglutinated chicken red blood cells (CRBCs) but unlike the I/V106, they rebound after elution at 37 °C. There were no mutations in the HA, but each phenotype correlated with the NA sequence. We propose that the activity in the I106M mutant is insufficient to remove carbohydrates from the virion HA and NA, sterically limiting HA access to CRBC receptors, thus resulting in poor HA binding.


Subject(s)
Antiviral Agents/pharmacology , Influenza A Virus, H1N1 Subtype/drug effects , Influenza, Human/virology , N-Acetylneuraminic Acid/pharmacology , Neuraminidase/antagonists & inhibitors , Animals , CHO Cells , Catalytic Domain , Cell Line , Cricetulus , Dogs , Drug Resistance, Viral/genetics , Hemagglutinin Glycoproteins, Influenza Virus/metabolism , Hemagglutinins , Humans , Hymecromone/analogs & derivatives , Influenza A Virus, H1N1 Subtype/genetics , Inhibitory Concentration 50 , Madin Darby Canine Kidney Cells , Mucins , Mutation , Neuraminidase/genetics , Ovum , Phenotype , Viral Proteins/genetics , Virus Replication/drug effects
17.
Antiviral Res ; 169: 104539, 2019 09.
Article in English | MEDLINE | ID: mdl-31228489

ABSTRACT

Neuraminidase inhibitors (NAIs) play a key role in the management of influenza. Given the limited number of FDA-approved anti-influenza drugs, evaluation of potential drug-resistant variants is of high priority. Two NA mutations, V116A and I117V, are found in ∼0.6% of human, avian, and swine N1 isolates. Using the A/California/04/09-like (CA/04, H1N1) background, we examined the impact of V116A and I117V NA mutations on NAI susceptibility, substrate specificity, and replicative capacity in normal human bronchial (NHBE) cells and a human respiratory epithelial cell line (Calu-3). We compared the impact of V116A and I117V on the functional properties of NA and compared these mutations with that of previously reported NAI-resistant mutations, E119A, H275Y, and N295S. All NA mutations were genetically stable. None of the viruses carrying NA mutations grew to significantly lower titers than CA/04 in Calu-3 cells. In contrast, V116A, I117V, E119A, and N295S substitutions resulted in significantly lower viral titers (1.2 logs) than the parental CA/04 virus in NHBE cells. V116A conferred reduced sensitivity to oseltamivir and zanamivir (13.7-fold). When MUNANA, 3'SL, and 6'SL substrates were applied, we observed that V116A reduced binding ability for all substrates (13.9-fold) and I117V led to the significantly decreased affinity for MUNANA and 6'SL (4.2-fold). Neither mutation altered the catalytic efficiency (kcat/KM) in catalyzing 3'SL, but the efficiency in catalyzing MUNANA and 6'SL was significantly decreased: only ∼34.7% compared to the wild-type NA. The efficiencies of NAs with E119A, H275Y, and N295S mutations to catalyze all substrates were ∼19.4% of the CA/04 NA. Our study demonstrates the direct effect of drug-resistant mutations located inside or adjacent to the NA active site on NA substrate specificity.


Subject(s)
Antiviral Agents/pharmacology , Influenza A Virus, H1N1 Subtype/drug effects , Influenza A Virus, H1N1 Subtype/genetics , Mutation , Neuraminidase/antagonists & inhibitors , Neuraminidase/genetics , Animals , Cell Line , Drug Resistance, Viral/drug effects , Drug Resistance, Viral/genetics , Enzyme Inhibitors/pharmacology , Humans , Hymecromone/analogs & derivatives , Hymecromone/pharmacology , Influenza, Human/virology , Kinetics , Oseltamivir/pharmacology , Sequence Analysis , Swine , Zanamivir/pharmacology
18.
Curr Protoc Pharmacol ; 85(1): e54, 2019 06.
Article in English | MEDLINE | ID: mdl-30920154

ABSTRACT

Human intestinal organoids have enabled performance of functional epithelial studies and modeling of human diseases of the intestine. This unit describes 1) a method to isolate and culture crypts from human intestinal tissue, 2) use of combinatorial methods to expand stem cell-enriched spheroids and differentiate them into organoids composed of various intestinal epithelial cell types, and 3) methods to stimulate these organoids with and measure their responsiveness to external stimuli. To validate the differentiation, organoids can be stained to qualitatively evaluate the presence of colonic crypt morphology and specialized epithelial cell markers. These organoids are responsive to challenge with tumor necrosis factor α (TNFα), resulting in cytokine-induced apoptosis. TNFα-driven apoptosis can be blocked by a small-molecule inhibitor of Ire1α (4µ8C), an endoplasmic-reticulum stress sensor. This is one example of how the human intestinal organoid model can be a powerful tool to elucidate important biological pathways involved in human disease in intestinal epithelial cells. © 2019 by John Wiley & Sons, Inc.


Subject(s)
Colon , Organoids , Apoptosis/drug effects , Colon/anatomy & histology , Colon/drug effects , Gene Expression , Humans , Hymecromone/analogs & derivatives , Hymecromone/pharmacology , Organ Culture Techniques , Organoids/anatomy & histology , Organoids/drug effects , RNA/analysis , Tumor Necrosis Factor-alpha/pharmacology
19.
J Biol Chem ; 294(19): 7864-7877, 2019 05 10.
Article in English | MEDLINE | ID: mdl-30914479

ABSTRACT

4-Methylumbelliferone (4-MU) inhibits hyaluronan (HA) synthesis and is an approved drug used for managing biliary spasm. However, rapid and efficient glucuronidation is thought to limit its utility for systemically inhibiting HA synthesis. In particular, 4-MU in mice has a short half-life, causing most of the drug to be present as the metabolite 4-methylumbelliferyl glucuronide (4-MUG), which makes it remarkable that 4-MU is effective at all. We report here that 4-MUG contributes to HA synthesis inhibition. We observed that oral administration of 4-MUG to mice inhibits HA synthesis, promotes FoxP3+ regulatory T-cell expansion, and prevents autoimmune diabetes. Mice fed either 4-MUG or 4-MU had equivalent 4-MU:4-MUG ratios in serum, liver, and pancreas, indicating that 4-MU and 4-MUG reach an equilibrium in these tissues. LC-tandem MS experiments revealed that 4-MUG is hydrolyzed to 4-MU in serum, thereby greatly increasing the effective bioavailability of 4-MU. Moreover, using intravital 2-photon microscopy, we found that 4-MUG (a nonfluorescent molecule) undergoes conversion into 4-MU (a fluorescent molecule) and that 4-MU is extensively tissue bound in the liver, fat, muscle, and pancreas of treated mice. 4-MUG also suppressed HA synthesis independently of its conversion into 4-MU and without depletion of the HA precursor UDP-glucuronic acid (GlcUA). Together, these results indicate that 4-MUG both directly and indirectly inhibits HA synthesis and that the effective bioavailability of 4-MU is higher than previously thought. These findings greatly alter the experimental and therapeutic possibilities for HA synthesis inhibition.


Subject(s)
Diabetes Mellitus, Experimental/metabolism , Diabetes Mellitus, Type 1/metabolism , Hyaluronic Acid/biosynthesis , Hymecromone/analogs & derivatives , T-Lymphocytes, Regulatory/metabolism , Animals , Diabetes Mellitus, Experimental/drug therapy , Diabetes Mellitus, Experimental/pathology , Diabetes Mellitus, Type 1/drug therapy , Diabetes Mellitus, Type 1/pathology , Hymecromone/pharmacology , Mice , T-Lymphocytes, Regulatory/pathology
20.
BMC Immunol ; 20(1): 3, 2019 01 10.
Article in English | MEDLINE | ID: mdl-30630412

ABSTRACT

BACKGROUND: T cell activation induces ER stress and upregulates Inositol Requiring Enzyme 1 alpha (IRE1α), an activator of the unfolded protein response (UPR) pathway. Inhibition of IRE1α RNase activity in activated CD4+ splenocytes from naïve mice, via treatment of the cells with the commercially available drug 4µ8c upon activation, results in the reduction of the secretion of proteins IL-5, IL-4, and IL-13. Prior to this work, it was unknown if 4µ8c could inhibit TH2 cytokines in established TH2 cells, cells that are crucial in promoting disease in severe asthma. RESULTS: Treatment of a mouse T helper (TH)2 cell line and differentiated human TH2 cells with 4µ8c resulted in inhibition of IL-5, but not IL-4, as measured by ELISA. The reduced cytokine expression was not due to differences in mRNA stability or mRNA levels; it appears to be due to a defect in secretion, as the cells produce cytokines IL-5 as measured by flow cytometry and western blot. CONCLUSION: These data suggest that the inhibition of IL-5 was due to post-translational processes. IL-5 promotes chronic, inflammatory asthma, and 4µ8c blocks its expression in T cells in vitro. Future studies will determine if 4µ8c treatment can ameliorate the effects of the cytokine IL-5 in a disease model.


Subject(s)
Hymecromone/analogs & derivatives , Interleukin-4/biosynthesis , Interleukin-5/biosynthesis , Th2 Cells/drug effects , Th2 Cells/metabolism , Animals , Cell Differentiation/immunology , Cell Line , Cytokines/metabolism , Endoribonucleases/antagonists & inhibitors , Humans , Hymecromone/pharmacology , Mice , Protein Serine-Threonine Kinases/antagonists & inhibitors , RNA Processing, Post-Transcriptional , Th2 Cells/cytology
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