ABSTRACT
Dogs are a major source of indoor allergens. However, the prevalence of dog allergies in China remains unclear, especially in children. In the present study, Can f 7, a canine allergen belonging to the Niemann pick type C2 protein family, was selected to study its sensitization rate in Chinese children with dog allergies. The Can f 7 gene was subcloned into a pET28a vector and expressed in Escherichia coli BL21 (DE3) cells. Recombinant Can f 7 was purified by nickel affinity chromatography, identified by SDSPAGE electrophoresis, and had its allergenicity assessed by western blot, ELISA and basophil activation tests. Through a series of bioinformatical approaches, Bcell epitopes, secondary structures, and 3 dimensional (3D) homology modeling of Can f 7 were predicted. The activity of the B cell epitopes was verified by ELISA. The recombinant Can f 7 showed a distinct band with a molecular weight of 14 kDa. Six of 20 sera from dogallergic children reacted positively to the Can f 7. Can f 7 induced an ~4.0fold increase in cluster of differentiation 63 and CC motif chemokine receptor R3 expression in basophils sensitized with the serum of dogallergic children compared with those of nonallergic controls. The secondary structure analysis showed that Can f 7 contains 6 ßsheets. Five B cell epitopes of Can f 7 were predicted, and two of these were confirmed by ELISA. These results indicate that Can f 7 is an important canine allergen in Chinese children and provide novel data for further research concerning the use of Can f 7 in the diagnosis and treatment of Chinese children with canine allergy symptoms.
Subject(s)
Allergens/genetics , Allergens/immunology , Epitopes, B-Lymphocyte/genetics , Epitopes, B-Lymphocyte/immunology , Gene Expression , Lipocalins/genetics , Lipocalins/immunology , Adolescent , Allergens/chemistry , Allergens/isolation & purification , Amino Acid Sequence , Animals , Child , Child, Preschool , Codon , Dogs , Enzyme-Linked Immunosorbent Assay , Epitopes, B-Lymphocyte/chemistry , Female , Humans , Hypersensitivity/immunology , Immunoglobulin E/immunology , Infant , Lipocalins/chemistry , Lipocalins/isolation & purification , Male , Models, Molecular , Protein Conformation , Recombinant ProteinsABSTRACT
Lipocalin-type prostaglandin D synthase (L-PGDS; EC:5.3.99.2) is an enzyme with dual functional roles as a prostaglandin D2 -synthesizing enzyme and as an extracellular transporter for diverse lipophilic compounds in the cerebrospinal fluid (CSF). Transport of hydrophobic endocannabinoids is mediated by serum albumin in the blood and intracellularly by the fatty acid binding proteins, but no analogous transport mechanism has yet been described in CSF. L-PGDS has been reported to promiscuously bind a wide variety of lipophilic ligands and is among the most abundant proteins found in the CSF. Here, we examine the binding of several classes of endogenous and synthetic ligands to L-PGDS. Endocannabinoids exhibited low affinity toward L-PGDS, while cannabinoid metabolites and synthetic cannabinoids displayed higher affinities for L-PGDS. These results indicate that L-PGDS is unlikely to function as a carrier for endocannabinoids in the CSF, but it may bind and transport a subset of cannabinoids.
Subject(s)
Cannabinoids/metabolism , Intramolecular Oxidoreductases/metabolism , Lipocalins/metabolism , Prostaglandins/metabolism , Tryptophan/chemistry , Brain/enzymology , Brain Chemistry , Cannabinoids/chemistry , Cloning, Molecular , Dansyl Compounds/chemistry , Dansyl Compounds/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Fatty Acids/chemistry , Fatty Acids/metabolism , Gene Expression , Gene Library , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Humans , Intramolecular Oxidoreductases/genetics , Intramolecular Oxidoreductases/isolation & purification , Kinetics , Lipocalins/genetics , Lipocalins/isolation & purification , Nitrobenzenes/chemistry , Nitrobenzenes/metabolism , Oxadiazoles/chemistry , Oxadiazoles/metabolism , Prostaglandins/chemistry , Protein Binding , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Solutions , Spectrometry, FluorescenceABSTRACT
The urine of bank voles (Myodes glareolus) contains substantial quantities of a small protein that is expressed at much higher levels in males than females, and at higher levels in males in the breeding season. This protein was purified and completely sequenced at the protein level by mass spectrometry. Leucine/isoleucine ambiguity was completely resolved by metabolic labelling, monitoring the incorporation of dietary deuterated leucine into specific sites in the protein. The predicted mass of the sequenced protein was exactly consonant with the mass of the protein measured in bank vole urine samples, correcting for the formation of two disulfide bonds. The sequence of the protein revealed that it was a lipocalin related to aphrodisin and other odorant-binding proteins (OBPs), but differed from all OBPs previously described. The pattern of secretion in urine used for scent marking by male bank voles, and the similarity to other lipocalins used as chemical signals in rodents, suggest that this protein plays a role in male sexual and/or competitive communication. We propose the name glareosin for this novel protein to reflect the origin of the protein and to emphasize the distinction from known OBPs.
Subject(s)
Animal Communication , Arvicolinae/genetics , Lipocalins/isolation & purification , Reproduction/genetics , Amino Acid Sequence , Animals , Arvicolinae/classification , Female , Gene Expression , Lipocalins/genetics , Lipocalins/ultrastructure , Lipocalins/urine , Male , Molecular Weight , Pheromones/genetics , Phylogeny , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Interaction Domains and Motifs , Proteins/genetics , Proteins/ultrastructure , Sequence Alignment , Sequence Homology, Amino Acid , Sex FactorsABSTRACT
BACKGROUND: Lipocalin proteins are secreted by tick salivary glands as an important strategy to interfere with the immune response of hosts. A large number of lipocalins are secreted, but the functions of most of these proteins are unclear. Here, we report a new lipocalin protein with particular histamine binding capacity, which was isolated from the salivary glands of the tick Hyalomma asiaticum. METHODS: The full length cDNA of the Ha24 gene was obtained by RACE, and Ha24 gene was expressed in E. coli; after protein purification and mice immunizations, specific Polyclonal antibodies (PcAb) were created in response to the recombinant protein. Reverse transcription PCR (RT-PCR), Quantitative PCR (Q-PCR), indirect immunofluorescence antibody (IFA) assay and western blot were used to detect the existence of native Ha24 in ticks. To confirm the histamine-binding capacity of rHa24, a histamine-binding assay was completed in vitro (ELISA) and in vivo by inhibition of allergic asthma in mice. RESULTS: Ha24 is coded by 681 bases, contains 227 amino acids, and has a molecular weight of 23.3 kDa. Abundant expression in the salivary glands of feeding ticks was confirmed by the identification of native Ha24 in ticks. The results of a histamine binding assay both in vitro and in vivo demonstrated that rHa24 binds specifically with histamine in a dose-dependent manner, and can provide relief from allergic asthma in mice. CONCLUSIONS: Ha24 is a new tick lipocalin with specific histamine binding activity that can provide relief from host inflammation response.
Subject(s)
Histamine/metabolism , Insect Proteins/metabolism , Ixodidae/chemistry , Lipocalins/metabolism , Salivary Glands/chemistry , Animals , Asthma/drug therapy , Cloning, Molecular , DNA, Complementary , Disease Models, Animal , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Insect Proteins/isolation & purification , Lipocalins/isolation & purification , Mice , Protein Binding , Therapeutic UsesABSTRACT
Human neutrophil gelatinase associated lipocalin (NGAL) is a secretory glycoprotein initially isolated from neutrophils. It is thought to be involved in the incidence and development of immunological diseases and cancers. Urinary and serum levels of NGAL have been investigated as a new biomarker of acute kidney injury (AKI), for an earlier and more accurate detection method than with creatinine level. However, expressing high-quality recombinant NGAL is difficult both in Escherichia coli and mammalian cells for the low yield. Here, we cloned and fused NGAL to the C-terminus of signal peptides of human NGAL, human interleukin-2 (IL2), gaussia luciferase (Gluc), human serum albumin preproprotein (HSA) or an hidden Markov model-generated signal sequence (HMM38) respectively for transient expression in Expi293F suspension cells to screen for their ability to improve the secretory expression of recombinant NGAL. The best results were obtained with signal peptide derived from HSA. The secretory recombinant protein could react specifically with NGAL antibody. For scaled production, we used HSA signal peptide to establish stable Chinese hamster ovary cell lines. Then we developed a convenient colony-selection system to select high-expression, stable cell lines. Moreover, we purified the NGAL with Ni-Sepharose column. The recombinant human NGAL displayed full biological activity. We provide a method to enhance the secretory expression of recombinant human NGAL by using the HSA signal peptide and produce the glycoprotein in mammalian cells.
Subject(s)
Acute-Phase Proteins/genetics , Lipocalins/genetics , Protein Engineering , Proto-Oncogene Proteins/genetics , Acute-Phase Proteins/chemistry , Acute-Phase Proteins/isolation & purification , Acute-Phase Proteins/metabolism , Animals , CHO Cells , Cricetinae , Cricetulus , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Humans , Lipocalin-2 , Lipocalins/chemistry , Lipocalins/isolation & purification , Lipocalins/metabolism , Lysobacter/genetics , Lysobacter/metabolism , Protein Folding , Protein Sorting Signals , Proto-Oncogene Proteins/chemistry , Proto-Oncogene Proteins/isolation & purification , Proto-Oncogene Proteins/metabolism , Serum Albumin/chemistry , Serum Albumin/geneticsABSTRACT
OBJECTIVE: To construct a prokaryotic expression vector of human neutrophil gelatinase associated lipocalin (NGAL) and identify the bioactivity of the fusion protein. METHODS: The cDNA of human NGAL obtained from GenBank was linked to a cloning vector to construct the prokaryotic expression vector pCold-NGAL. Then the vector was transformed into E.coli BL21(DE3) plysS. Under the optimal induction condition, the recombinant NGAL (rNGAL) was expressed and purified by Ni Sepharose 6 Fast Flow affinity chromatography. The purity and activity of the rNGAL were respectively identified by SDS-PAGE and Western blotting combined with NGAL reagent (Latex enhanced immunoturbidimetry). RESULTS: Restriction enzyme digestion and nucleotide sequencing proved that the expression vector pCold-NGAL was successfully constructed. Under the optimal induction condition that we determined, the rNGAL was expressed in soluble form in E.coli BL21(DE3) plysS. The relative molecular mass of the rNGAL was 25 000, and its purity was more than 98.0%. Furthermore, Western blotting and immunoturbidimetry indicated that the rNGAL reacted with NGAL mAb specifically. CONCLUSION: Human rNGAL of high purity and bioactivity was successfully constructed in E.coli BL21(DE3) plysS using the expression vector pCold-NGAL.
Subject(s)
Acute-Phase Proteins/genetics , Acute-Phase Proteins/immunology , Escherichia coli/genetics , Genetic Engineering/methods , Lipocalins/genetics , Lipocalins/immunology , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins/immunology , Acute-Phase Proteins/isolation & purification , Cloning, Molecular , Gene Expression , Genetic Vectors/genetics , Humans , Lipocalin-2 , Lipocalins/isolation & purification , Proto-Oncogene Proteins/isolation & purification , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/immunology , Recombinant Fusion Proteins/isolation & purificationABSTRACT
Avian pathogenic Escherichia coli (APEC) causes respiratory disease and sepsis in poultry. To persist in its host, E. coli requires essential nutrients including iron. Since iron is limited in extra-intestinal tissues, E. coli produces siderophores, small molecules with high affinity for ferric iron, to sequester this essential nutrient. To counter bacterial siderophore systems, mammalian hosts secrete siderocalin (also called lipocalin 2 or NGAL), which binds ferric-siderophore complexes rendering them unavailable to bacteria. In humans and mice, siderocalin is known to play a role in primary defense against bacterial infections. In poultry, 4 proteins display homology to the human NGAL (CALß, CALγ, Ggal-C8GC and Ex-FABP). The function and expression of the genes coding for these 4 proteins during infection by APEC is still unknown. Expression levels of these genes were determined by quantitative RT-PCR using RNA extracted from lungs, livers and spleens of healthy 3-week-old chickens and chickens infected with APEC. The gene coding for Ex-FABP was overexpressed in all organs tested. It was significantly more overexpressed in the lungs and liver than in the spleen (37.3 and 27.3 times versus 11.5 times, respectively). The genes coding for Calß and Calγ were also found significantly overexpressed in the liver (27 and 8.2 times, respectively). To confirm the function of Ex-FABP as a siderocalin, the gene coding for this protein was cloned in an expression vector and the protein was purified. In vitro growth inhibition of E. coli strains by Ex-FABP was assayed in parallel with growth inhibition caused by human siderocalin. Purified Ex-FABP inhibited growth of E. coli K-12, which only produces the siderophore enterobactin. However, E. coli strains producing pathogen-associated siderophores including salmochelins (glucosylated enterobactin), aerobactin and yersiniabactin grew normally in the presence of Ex-FABP. These results indicate that Ex-FABP is an avian siderocalin with a siderophore-binding activity similar to that of human siderocalin and that pathogen-specific siderophores are required by APEC to overcome this innate defense protein in poultry.
Subject(s)
Avian Proteins/pharmacology , Escherichia coli Infections/veterinary , Escherichia coli/immunology , Fatty Acid-Binding Proteins/pharmacology , Lipocalins/biosynthesis , Poultry Diseases/microbiology , Amino Acid Sequence , Animals , Avian Proteins/genetics , Avian Proteins/immunology , Avian Proteins/isolation & purification , Chickens , Escherichia coli Infections/immunology , Escherichia coli Infections/metabolism , Escherichia coli Infections/microbiology , Fatty Acid-Binding Proteins/genetics , Fatty Acid-Binding Proteins/immunology , Fatty Acid-Binding Proteins/isolation & purification , Lipocalins/genetics , Lipocalins/immunology , Lipocalins/isolation & purification , Lipocalins/pharmacology , Models, Molecular , Molecular Sequence Data , Poultry Diseases/immunology , Poultry Diseases/metabolism , RNA/chemistry , RNA/genetics , Real-Time Polymerase Chain Reaction/veterinary , Sequence Alignment , Siderophores/genetics , Siderophores/immunology , Specific Pathogen-Free OrganismsABSTRACT
In this communication, I describe the challenges in quantitative analyses for volatile organic compounds in mouse urine, which are primarily caused by the presence of the major urinary proteins, a lipocalin subfamily, that sequester volatile ligands. The analyses of volatile compounds in mouse urine have been performed since the late 1970s. However, none of them considered the binding interactions of the quantified compounds with the urinary proteins. Some volatile ligands are tightly bound to the proteins and may not be extracted completely by organic solvents. The amounts of volatile ligands measured by external standard calibration represent those of the unbound ligands in the headspace, not the total amounts in urine. Addition of internal standards displaces ligands bound to the proteins, resulting in a completely different volatile profile. Normalization of volatile compounds using relative peak area (or height) ratios may not be used in the conditions where displacement of ligands bound to the proteins occurs. Because of the unique chemical properties of mouse urine, I have not been able to find a good quantification method for the volatile compounds released from mouse urine. I hope that the identification of these issues will stimulate others to come up with novel approaches.
Subject(s)
Lipocalins/metabolism , Lipocalins/urine , Volatile Organic Compounds/chemistry , Animals , Chromatography, High Pressure Liquid , Ligands , Lipocalins/isolation & purification , Male , Mice , Protein Binding , Solid Phase ExtractionABSTRACT
As a follow-up to our recent analysis of the electrostatics of bovine ß-lactoglobulin (Eberini et al. in Amino Acids 42:2019-2030, 2011), we investigated whether the occurrence in the native structure of calycins-the superfamily to which ß-lactoglobulin belongs-of amino acids with anomalous pK (a)s is an infrequent or, on the contrary, a common occurrence, and whether or not a general pattern may be recognized. To this aim, we randomly selected four calycins we had either purified from natural sources or prepared with recombinant DNA technologies during our previous and current structural and functional studies on this family. Their pIs vary over several pH units and their known functions are as diverse as carriers, enzymes, immunomodulators and/or extracellular chaperones. In our survey, we used both in silico prediction methods and in vitro procedures, such as isoelectric focusing, electrophoretic titration curves and spectroscopic techniques. By comparing the results under native conditions (no exposure of the proteins to chaotropic agents) to those after protein unfolding (in the presence of 8 M urea), a shift is observed in the pK (a) of at least one amino acid per protein, which results in a measurable change in pI. Three types of amino acids are involved: Cys, Glu, and His, their position varies along the calycin sequence. Although no common mechanism may thus be recognized, we hypothesize that the 'normalization' of anomalous pK (a)s may be the phenomenon that accompanies, and favors, structural rearrangements such as those involved in ligand binding by these proteins. An interesting, if anecdotal, validation to this view comes from the behavior of human retinol binding protein, for which the pI of the folded and liganded protein is intermediate between those of the folded and unliganded and of the unfolded protein forms. Likewise, both solid (from crystallography) and solution state (from CD spectroscopy) data confirm that the protein undergoes structural rearrangement upon retinol binding.
Subject(s)
Amino Acids/chemistry , Lipocalins/chemistry , Amino Acid Sequence , Animals , Chickens , Humans , Hydrogen-Ion Concentration , Lipocalins/isolation & purification , Models, Molecular , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Sequence AlignmentABSTRACT
Tributyltin-binding protein type 1 (TBT-bp1) is a member of the lipocalin family of proteins which bind to small hydrophobic molecules. In this study, we expressed a recombinant TBT-bp1 (rTBT-bp1, ca. 35kDa) in a baculovirus expression system and purified the protein from the hemolymph of silkworm larvae injected with recombinant baculovirus. After incubation of a mixture of rTBT-bp1 and TBT and its fractionation by means of gel filtration chromatography, TBT was detected in the elution peak of rTBT-bp1, confirming the binding potential of rTBT-bp1 for TBT. An assay of the ability of rTBT-bp1 or native TBT-bp1 (nTBT-bp1) to restore osteoblastic activity inhibited by TBT showed that co-treatment of the scales with rTBT-bp1 or nTBT-bp1 in combination with TBT restored osteoblastic activity in goldfish scales, whereas treatment with TBT alone significantly inhibited osteoblastic activity. These results suggest that TBT-bp1 as a lipocalin member might function to decrease the toxicity of TBT by binding to TBT.
Subject(s)
Fish Proteins/metabolism , Fishes/metabolism , Lipocalins/metabolism , Osteoblasts/drug effects , Trialkyltin Compounds/toxicity , Water Pollutants, Chemical/toxicity , Animals , Endocrine Disruptors/toxicity , Fish Proteins/isolation & purification , Fish Proteins/pharmacology , Lipocalins/isolation & purification , Lipocalins/pharmacology , Osteoblasts/metabolism , Trialkyltin Compounds/antagonists & inhibitors , Water Pollutants, Chemical/antagonists & inhibitorsABSTRACT
The lipocalin protein family is a large and diverse group of small extracellular proteins characterised by their ability to bind hydrophobic molecules. In the present study, we describe the isolation procedure for rainbow trout seminal plasma protein, characterised by a moderate migration rate during polyacrylamide gel electrophoresis, providing information regarding its basic features and immunohistochemical localisation. This protein was identified as a lipocalin-type protein (LTP). The molecular mass of LTP was found to be 18,848 Da and it was found to lack any carbohydrate components. Only a few Salmoniformes contain LTP in their seminal plasma. The abundance of LTP in the Sertoli and Leydig cells of the testes of the rainbow trout, as well as in secretory cells of the efferent duct, suggests that this protein is specific for rainbow trout milt, where it acts as a lipophilic carrier protein. Moreover, the specific localisation of LTP in the flagella of the spermatozoa suggests a role for LTP in sperm motility. Further experiments are necessary to identify the endogenous ligands for LTP in rainbow trout seminal plasma and to characterise the binding properties of this protein.
Subject(s)
Lipocalins/isolation & purification , Oncorhynchus mykiss/metabolism , Semen/chemistry , Testis/chemistry , Amino Acid Sequence , Animals , Immunohistochemistry , Leydig Cells/chemistry , Lipocalins/analysis , Lipocalins/chemistry , Male , Molecular Sequence Data , Sertoli Cells/chemistry , Sperm Tail/chemistryABSTRACT
The separation of intact proteins by means of Hydrophilic Interaction Chromatography (HILIC) was demonstrated with human apoA-I, recombinant human apoM, and equine cytochrome C. Five different commercially available HILIC columns were compared. Using one of these columns, different glycosylated isoforms of apoM were separated from each other and from the aglyco-form.
Subject(s)
Chromatography, Liquid/methods , Hydrophobic and Hydrophilic Interactions , Proteins/isolation & purification , Animals , Apolipoprotein A-I/chemistry , Apolipoprotein A-I/isolation & purification , Apolipoproteins/chemistry , Apolipoproteins/isolation & purification , Apolipoproteins M , Cell Line, Tumor , Chromatography, Liquid/instrumentation , Cytochromes c/chemistry , Cytochromes c/isolation & purification , Horses , Humans , Lipocalins/chemistry , Lipocalins/isolation & purification , Protein Isoforms , Proteins/chemistry , SolubilityABSTRACT
Many rodents are now known to exhibit an obligate proteinuria that delivers urine-mediated chemosignals. In this paper, we explore the urinary proteins of the Roborovski hamster (Phodopus roborovskii). Sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis of urine from individual male and female Roborovski hamsters revealed 2 proteins, with approximate masses of 6 and 17 kDa, the expression pattern of which showed little variation between individuals or between sexes. Peptide mass fingerprints obtained from these 2 proteins revealed a number of features: 1) the proteins of a given mass were the same in all individuals regardless of sex, 2) the 6 kDa protein was not a fragment of the 21 kDa protein, and 3) neither protein was a fragment of a larger, conserved protein such as serum albumin. Electrospray mass spectrometry of purified protein preparations established the mass of the larger protein as invariant, at 17144 ± 2 Da in all samples. This protein has been termed roborovskin. The primary structure of roborovskin was determined by tandem mass spectrometry of peptides derived from independent and overlapping digestion with 3 proteases, supported by Edman degradation of the protein N-terminus. Roborovskin shared significant homology with olfactory-binding proteins from Myodes glareolus (bank vole) and with aphrodisin and submandibular protein from the golden hamster Mesocricetus auratus, all of which belong to the lipocalin superfamily. Lower levels of homology were also indicated between a variety of other lipocalins including the major urinary proteins from house mice and Norway rats. A model of the tertiary structure of roborovskin was constructed from the primary sequence by homology modeling. This model structure resembled other 8-stranded beta barrel lipocalins. Thus, the Roborovski hamster may demonstrate another variant of urinary lipocalin expression, as for the animals studied here, there appears to be no polymorphism in expression either between sexes or individuals.
Subject(s)
Lipocalins/chemistry , Amino Acid Sequence , Animals , Cricetinae , Electrophoresis, Polyacrylamide Gel , Female , Lipocalins/isolation & purification , Lipocalins/urine , Male , Mice , Molecular Sequence Data , Phodopus , Protein Structure, Tertiary , Rats , Sequence Alignment , Sequence Homology, Amino Acid , Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationABSTRACT
Proteins belonging to the lipocalin superfamily are usually secretory proteins of molecular mass approximately 20 kDa with a hydrophobic pocket for the binding and transport of diverse small ligands. Various lipocalins have been associated with many biological processes, e.g. immunomodulation, odorant transport, pheromonal activity, retinoid transport, cancer-cell interactions etc. However, the exact functions of many lipocalins and the ligands bound by them are unclear. Previously, the cDNA of a 20 kDa lipocalin (FLP) which is female-specifically expressed in the lacrimal glands of Syrian (golden) hamsters and secreted in the tears of females has been identified and cloned. His-tagged recombinant FLP (rFLP) has now been cloned, overexpressed in Escherichia coli as a soluble protein and purified to homogeneity using Ni-affinity followed by size-exclusion chromatography. Purified rFLP was crystallized using the sitting-drop vapour-diffusion method. The crystals tested belonged to space group P2(1)2(1)2(1) and diffracted to beyond 1.86 A resolution. Solvent-content analysis indicated the presence of one monomer in the asymmetric unit.
Subject(s)
Lacrimal Apparatus/chemistry , Lipocalins/chemistry , Mesocricetus , Animals , Cloning, Molecular , Cricetinae , Crystallization , Crystallography, X-Ray , Female , Gene Expression , Lipocalins/genetics , Lipocalins/isolation & purificationABSTRACT
Neutrophil gelatinase-associated lipocalin (NGAL) protein is an early biomarker for acute kidney injury (AKI). It is unknown if extracorporeal therapies (EC) have an effect on circulating NGAL levels. This study was designed to describe the kinetics of NGAL molecule in different EC techniques and to evaluate NGAL clearance in different operational conditions. A mock hemofiltration (HF) and hemoperfusion (HP) setup was used. NGAL was added to the blood reservoir and then measured at 30-minute intervals from arterial, venous, and ultrafiltrate (UF) lines. Removal kinetics and NGAL sieving coefficient were calculated. In our experiments, baseline NGAL concentration averaged 452 microg/L. There was a consistent downward trend throughout the experiment. NGAL concentration in the UF was between 80 and 90 microg/L, though it showed a slight increase in the second hour. The sieving coefficient of NGAL ranged from 0.2 to 0.4 during HF and it appeared to increase with time, suggesting an initial effect of membrane adsorption. HP proved clearly that there was adsorption of NGAL by the membrane and the point of saturation occured at approximately 60 minutes from the start of circulation. Our evaluation demonstrates that NGAL can be adsorbed and ultrafiltrated with polysulfone membranes. This should be taken into consideration when using NGAL as an AKI biomarker in patients undergoing EC circulation.
Subject(s)
Acute Kidney Injury/blood , Acute Kidney Injury/therapy , Acute-Phase Proteins/isolation & purification , Hemofiltration/methods , Hemoperfusion/methods , Lipocalins/blood , Lipocalins/isolation & purification , Proto-Oncogene Proteins/blood , Proto-Oncogene Proteins/isolation & purification , Biomarkers/blood , Hemofiltration/instrumentation , Humans , In Vitro Techniques , Kinetics , Lipocalin-2 , Models, BiologicalABSTRACT
Mouse lipocalin6 (mLcn6) was recently identified to be specifically expressed in the epididymis and speculated to may play a role in sperm maturation. However, further studies were hindered due to the bottleneck to obtain enough recombinant mLcn6 proteins. In this article, GB1 tag was successfully applied to improve the soluble expression of mLcn6. Thermal unfolding experiments demonstrate that GB1 can enhance the structural stability of mLcn6. Fluorescence spectroscopy experiments show that mLcn6 prepared according to our procedure has high affinities to both retinoic acid (K(d)=810nM) and retinol (K(d)=210nM). In conclusion, soluble, stable and active mLcn6 was recombinantly prepared with the help of the GB1 tag, which will facilitate the structural and functional studies of mLcn6.
Subject(s)
Epididymis/metabolism , Lipocalins/metabolism , Retinol-Binding Proteins, Plasma/metabolism , Animals , Circular Dichroism , Fluorescence , Ligands , Lipocalins/isolation & purification , Male , Mice , Organ Specificity , Plasmids/genetics , Protein Folding , Recombinant Fusion Proteins/metabolism , Retinol-Binding Proteins, Plasma/isolation & purification , Solubility , Temperature , TitrimetryABSTRACT
CONCLUSION: Neutrophil gelatinase-associated lipocalin (NGAL) and Ki-67 expression were up-regulated in cholesteatoma and the expression pattern of NGAL in the epithelial layer was inversely related to the expression of Ki-67. Therefore, NGAL may be related to dysregulated differentiation in the keratinocytes during the development of a cholesteatoma. OBJECTIVES: We investigated the differential expression and localization of NGAL in middle ear cholesteatoma and compared the results to normal external auditory canal (EAC) skin. We also compared the expression and localization of NGAL with the expression and localization of Ki-67 in middle ear cholesteatoma. SUBJECTS AND METHODS: Tissue samples from middle ear cholesteatomas and normal EAC skin were obtained from 20 patients undergoing middle ear surgery. NGAL mRNA expression was determined by the reverse transcriptase-polymerase chain reaction (RT-PCR). The expression of NGAL protein was analyzed by Western blot. NGAL and Ki-67 were localized by immunohistochemical staining. RESULTS: A significantly greater expression of the NGAL mRNA was observed in cholesteatoma epithelium than in normal EAC skin (p < 0.05). NGAL was detected in the granular layer of cholesteatoma. However, NGAL was scarcely expressed in normal EAC skin. Ki-67 was detected predominantly in the basal and parabasal layers of cholesteatoma epithelium.
Subject(s)
Acute-Phase Proteins/metabolism , Cholesteatoma, Middle Ear/metabolism , Ear Canal/metabolism , Epithelium/metabolism , Lipocalins/metabolism , Proto-Oncogene Proteins/metabolism , Acute-Phase Proteins/isolation & purification , Cholesteatoma, Middle Ear/pathology , Ear Canal/cytology , Ear Canal/pathology , Epithelium/pathology , Female , Humans , Immunohistochemistry , Ki-67 Antigen/metabolism , Lipocalin-2 , Lipocalins/isolation & purification , Male , Middle Aged , Proto-Oncogene Proteins/isolation & purification , Up-RegulationABSTRACT
BACKGROUND: During their blood meal, ticks secrete a wide variety of proteins that interfere with their host's defense mechanisms. Among these proteins, lipocalins play a major role in the modulation of the inflammatory response. METHODOLOGY/PRINCIPAL FINDINGS: Screening a cDNA library in association with RT-PCR and RACE methodologies allowed us to identify 14 new lipocalin genes in the salivary glands of the Ixodes ricinus hard tick. A computational in-depth structural analysis confirmed that LIRs belong to the lipocalin family. These proteins were called LIR for "Lipocalin from I. ricinus" and numbered from 1 to 14 (LIR1 to LIR14). According to their percentage identity/similarity, LIR proteins may be assigned to 6 distinct phylogenetic groups. The mature proteins have calculated pM and pI varying from 21.8 kDa to 37.2 kDa and from 4.45 to 9.57 respectively. In a western blot analysis, all recombinant LIRs appeared as a series of thin bands at 50-70 kDa, suggesting extensive glycosylation, which was experimentally confirmed by treatment with N-glycosidase F. In addition, the in vivo expression analysis of LIRs in I. ricinus, examined by RT-PCR, showed homogeneous expression profiles for certain phylogenetic groups and relatively heterogeneous profiles for other groups. Finally, we demonstrated that LIR6 codes for a protein that specifically binds leukotriene B4. CONCLUSIONS/SIGNIFICANCE: This work confirms that, regarding their biochemical properties, expression profile, and sequence signature, lipocalins in Ixodes hard tick genus, and more specifically in the Ixodes ricinus species, are segregated into distinct phylogenetic groups suggesting potential distinct function. This was particularly demonstrated by the ability of LIR6 to scavenge leukotriene B4. The other LIRs did not bind any of the ligands tested, such as 5-hydroxytryptamine, ADP, norepinephrine, platelet activating factor, prostaglandins D2 and E2, and finally leukotrienes B4 and C4.
Subject(s)
Ixodes/genetics , Lipocalins/chemistry , Lipocalins/genetics , Phylogeny , Amino Acid Sequence , Animals , Cloning, Molecular , Conserved Sequence , Female , Gene Expression Profiling , Ixodes/chemistry , Lipocalins/isolation & purification , Molecular Sequence Data , Multigene Family , Rabbits , Sequence Homology, Amino Acid , Tick Infestations/parasitology , Ticks/geneticsABSTRACT
Lipocalin-type prostaglandin (PG) D synthase (L-PGDS) is the only member of the lipocalin superfamily that displays enzymatic activity. It binds lipophilic ligands with high affinity and also can catalyze PGH2 to produce PGD2. Three cysteine residues, Cys65, Cys89, and Cys186 in L-PGDS, are conserved among all species, of which Cys89 and Cys186 residues form a disulfide bridge. In this study, we clarified the effects of thiol groups on the structure of the protein and investigated the structural significance of Cys residues of rat L-PGDS by site-directed mutagenesis. Four mutants were constructed by substituting Cys residues with alanine to identify the correct formation of disulfide bonds among these three residues. The effects of thiol groups on the structure of rat L-PGDS were also identified by these mutants. Analysis of HSQC experiments indicated that these enzymes were all properly folded with well defined tertiary structures. As the first step towards the 3-D nuclear magnetic resonance solution structure, we optimized expression of recombinant rat L-PGDS in Escherichia coli and established an efficient and economic purification protocol yielding large amounts of pure isotopically labeled rat L-PGDS. The results of assignments indicated that the wild-type rat L-PGDS obtained using this expression system was suitable for determination of 3-D nuclear magnetic resonance solution structure.
Subject(s)
Escherichia coli/physiology , Intramolecular Oxidoreductases/chemistry , Intramolecular Oxidoreductases/metabolism , Lipocalins/chemistry , Lipocalins/metabolism , Magnetic Resonance Spectroscopy/methods , Amino Acid Substitution , Animals , Cysteine/chemistry , Cysteine/genetics , Enzyme Activation , Enzyme Stability , Intramolecular Oxidoreductases/genetics , Intramolecular Oxidoreductases/isolation & purification , Lipocalins/genetics , Lipocalins/isolation & purification , Mutagenesis, Site-Directed , Protein Engineering/methods , Rats , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolismABSTRACT
Lazarillo, a glycoprotein involved in axon growth and guidance in the grasshopper embryo, is the only member of the lipocalin family that is attached to the cell surface by a GPI anchor. Recently, the study of Lazarillo homologous genes in Drosophila and mouse has revealed new functions in the regulation of lifespan, stress resistance and neurodegeneration. Here we report an analysis of biochemical properties of Lazarillo to gain insight into the molecular basis of its physiological function. Recombinant forms of the grasshopper protein were expressed in two different systems to test: (1) potential binding of several hydrophobic ligands; (2) protein-protein homophilic interactions; and (3) whether interaction with the function-blocking mAb 10E6 interferes with ligand binding. We tested 10 candidate ligands (retinoic acid, heme, bilirubin, biliverdin, ecdysterone, juvenile hormone, farnesol, arachidonic acid, linoleic acid and palmitic acid), and monitored binding using electrophoretic mobility shift, absorbance spectrum, and fluorimetry assays. Our work indicates binding to heme and retinoic acid, resulting in increased electrophoretic mobility, as well as to fatty acids, resulting in multimerization. Retinoic acid and fatty acids binding were confirmed by fluorescence titration, and heme binding was confirmed with absorbance spectrum assays. We demonstrate that Lazarillo oligomerizes in solution and can form clusters in the plasma membrane when expressed and GPI-anchored to the cell surface, however it is unable to mediate cell-cell adhesion. Finally, by ligand-mAb competition experiments we show that ligand-binding alone cannot be the key factor for Lazarillo to perform its function during axonal growth in the grasshopper embryo.