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1.
J Virol ; 98(4): e0005124, 2024 Apr 16.
Article in English | MEDLINE | ID: mdl-38466095

ABSTRACT

Avian metapneumovirus subgroup C (aMPV/C), an important pathogen causing acute respiratory infection in chickens and turkeys, contributes to substantial economic losses in the poultry industry worldwide. aMPV/C has been reported to induce autophagy, which is beneficial to virus replication. Sequestosome 1 (SQSTM1/P62), a selective autophagic receptor, plays a crucial role in viral replication by clearing ubiquitinated proteins. However, the relationship between SQSTM1-mediated selective autophagy and aMPV/C replication is unclear. In this study, we found that the expression of SQSTM1 negatively regulates aMPV/C replication by reducing viral protein expression and viral titers. Further studies revealed that the interaction between SQSTM1 and aMPV/C M2-2 protein is mediated via the Phox and Bem1 (PB1) domain of the former, which recognizes a ubiquitinated lysine at position 67 of the M2-2 protein, and finally degrades M2-2 via SQSTM1-mediated selective autophagy. Collectively, our results reveal that SQSTM1 degrades M2-2 via a process of selective autophagy to suppress aMPV/C replication, thereby providing novel insights for the prevention and control of aMPV/C infection.IMPORTANCEThe selective autophagy plays an important role in virus replication. As an emerging pathogen of avian respiratory virus, clarification of the effect of SQSTM1, a selective autophagic receptor, on aMPV/C replication in host cells enables us to better understand the viral pathogenesis. Previous study showed that aMPV/C infection reduced the SQSTM1 expression accompanied by virus proliferation, but the specific regulatory mechanism between them was still unclear. In this study, we demonstrated for the first time that SQSTM1 recognizes the 67th amino acid of M2-2 protein by the interaction between them, followed by M2-2 degradation via the SQSTM1-mediated selective autophagy, and finally inhibits aMPV/C replication. This information supplies the mechanism by which SQSTM1 negatively regulates viral replication, and provides new insights for preventing and controlling aMPV/C infection.


Subject(s)
Autophagy , Birds , Metapneumovirus , Proteolysis , Sequestosome-1 Protein , Viral Proteins , Virus Replication , Animals , Humans , HEK293 Cells , Metapneumovirus/classification , Metapneumovirus/growth & development , Paramyxoviridae Infections/metabolism , Paramyxoviridae Infections/veterinary , Paramyxoviridae Infections/virology , Protein Binding , Sequestosome-1 Protein/chemistry , Sequestosome-1 Protein/metabolism , Vero Cells , Viral Proteins/chemistry , Viral Proteins/metabolism , Birds/virology
2.
Clin Microbiol Infect ; 27(1): 96-104, 2021 Jan.
Article in English | MEDLINE | ID: mdl-32244051

ABSTRACT

OBJECTIVES: This study determined associations between respiratory viruses and subsequent illness course in primary care adult patients presenting with acute cough and/or suspected lower respiratory tract infection. METHODS: A prospective European primary care study recruited adults with symptoms of lower respiratory tract infection between November 2007 and April 2010. Real-time in-house polymerase chain reaction (PCR) was performed to test for six common respiratory viruses. In this secondary analysis, symptom severity (scored 1 = no problem, 2 = mild, 3 = moderate, 4 = severe) and symptom duration were compared between groups with different viral aetiologies using regression and Cox proportional hazard models, respectively. Additionally, associations between baseline viral load (cycle threshold (Ct) value) and illness course were assessed. RESULTS: The PCR tested positive for a common respiratory virus in 1354 of the 2957 (45.8%) included patients. The overall mean symptom score at presentation was 2.09 (95% confidence interval (CI) 2.07-2.11) and the median duration until resolution of moderately bad or severe symptoms was 8.70 days (interquartile range 4.50-11.00). Patients with influenza virus, human metapneumovirus (hMPV), respiratory syncytial virus (RSV), coronavirus (CoV) or rhinovirus had a significantly higher symptom score than patients with no virus isolated (0.07-0.25 points or 2.3-8.3% higher symptom score). Time to symptom resolution was longer in RSV infections (adjusted hazard ratio (AHR) 0.80, 95% CI 0.65-0.96) and hMPV infections (AHR 0.77, 95% CI 0.62-0.94) than in infections with no virus isolated. Overall, baseline viral load was associated with symptom severity (difference 0.11, 95% CI 0.06-0.16 per 10 cycles decrease in Ct value), but not with symptom duration. CONCLUSIONS: In healthy, working adults from the general community presenting at the general practitioner with acute cough and/or suspected lower respiratory tract infection other than influenza impose an illness burden comparable to influenza. Hence, the public health focus for viral respiratory tract infections should be broadened.


Subject(s)
Primary Health Care/statistics & numerical data , Respiratory Tract Infections/epidemiology , Respiratory Tract Infections/physiopathology , Virus Diseases/epidemiology , Virus Diseases/physiopathology , Adult , Belgium/epidemiology , Convalescence , Coronavirus/growth & development , Coronavirus/pathogenicity , Female , Humans , Male , Metapneumovirus/growth & development , Metapneumovirus/pathogenicity , Netherlands/epidemiology , Orthomyxoviridae/growth & development , Orthomyxoviridae/pathogenicity , Proportional Hazards Models , Prospective Studies , Respiratory Syncytial Virus, Human/growth & development , Respiratory Syncytial Virus, Human/pathogenicity , Respiratory Tract Infections/classification , Respiratory Tract Infections/diagnosis , Rhinovirus/growth & development , Rhinovirus/pathogenicity , Severity of Illness Index , Viral Load , Virus Diseases/classification , Virus Diseases/diagnosis
3.
Nat Microbiol ; 5(4): 584-598, 2020 04.
Article in English | MEDLINE | ID: mdl-32015498

ABSTRACT

Internal N6-methyladenosine (m6A) modification is one of the most common and abundant modifications of RNA. However, the biological roles of viral RNA m6A remain elusive. Here, using human metapneumovirus (HMPV) as a model, we demonstrate that m6A serves as a molecular marker for innate immune discrimination of self from non-self RNAs. We show that HMPV RNAs are m6A methylated and that viral m6A methylation promotes HMPV replication and gene expression. Inactivating m6A addition sites with synonymous mutations or demethylase resulted in m6A-deficient recombinant HMPVs and virion RNAs that induced increased expression of type I interferon, which was dependent on the cytoplasmic RNA sensor RIG-I, and not on melanoma differentiation-associated protein 5 (MDA5). Mechanistically, m6A-deficient virion RNA induces higher expression of RIG-I, binds more efficiently to RIG-I and facilitates the conformational change of RIG-I, leading to enhanced interferon expression. Furthermore, m6A-deficient recombinant HMPVs triggered increased interferon in vivo and were attenuated in cotton rats but retained high immunogenicity. Collectively, our results highlight that (1) viruses acquire m6A in their RNA as a means of mimicking cellular RNA to avoid detection by innate immunity and (2) viral RNA m6A can serve as a target to attenuate HMPV for vaccine purposes.


Subject(s)
Adenosine/analogs & derivatives , DEAD Box Protein 58/genetics , Immune Evasion/genetics , Interferon-beta/genetics , Metapneumovirus/immunology , RNA, Viral/genetics , A549 Cells , Adenosine/immunology , Adenosine/metabolism , Animals , Chlorocebus aethiops , DEAD Box Protein 58/immunology , Gene Expression Regulation , Genome, Viral/immunology , HeLa Cells , Host-Pathogen Interactions/genetics , Host-Pathogen Interactions/immunology , Humans , Interferon Regulatory Factor-3/genetics , Interferon Regulatory Factor-3/immunology , Interferon-Induced Helicase, IFIH1/genetics , Interferon-Induced Helicase, IFIH1/immunology , Interferon-beta/immunology , Metapneumovirus/genetics , Metapneumovirus/growth & development , NF-kappa B/genetics , NF-kappa B/immunology , Paramyxoviridae Infections/genetics , Paramyxoviridae Infections/immunology , Paramyxoviridae Infections/virology , RNA, Viral/immunology , Receptors, Immunologic , Sigmodontinae , Signal Transduction , THP-1 Cells , Vero Cells , Virion/genetics , Virion/growth & development , Virion/immunology
4.
Virology ; 543: 43-53, 2020 04.
Article in English | MEDLINE | ID: mdl-32056846

ABSTRACT

Viruses possessing class I fusion proteins require proteolytic activation by host cell proteases to mediate fusion with the host cell membrane. The mammalian SPINT2 gene encodes a protease inhibitor that targets trypsin-like serine proteases. Here we show the protease inhibitor, SPINT2, restricts cleavage-activation efficiently for a range of influenza viruses and for human metapneumovirus (HMPV). SPINT2 treatment resulted in the cleavage and fusion inhibition of full-length influenza A/CA/04/09 (H1N1) HA, A/Aichi/68 (H3N2) HA, A/Shanghai/2/2013 (H7N9) HA and HMPV F when activated by trypsin, recombinant matriptase or KLK5. We also demonstrate that SPINT2 was able to reduce viral growth of influenza A/CA/04/09 H1N1 and A/X31 H3N2 in cell culture by inhibiting matriptase or TMPRSS2. Moreover, inhibition efficacy did not differ whether SPINT2 was added at the time of infection or 24 h post-infection. Our data suggest that the SPINT2 inhibitor has a strong potential to serve as a novel broad-spectrum antiviral.


Subject(s)
Influenza A virus/drug effects , Membrane Glycoproteins/metabolism , Membrane Glycoproteins/pharmacology , Metapneumovirus/drug effects , Serine Proteinase Inhibitors/pharmacology , Viral Fusion Proteins/metabolism , Animals , Cell Line , Cell Survival/drug effects , Hemagglutinin Glycoproteins, Influenza Virus/metabolism , Host-Pathogen Interactions , Humans , Influenza A Virus, H1N1 Subtype/drug effects , Influenza A Virus, H1N1 Subtype/growth & development , Influenza A Virus, H1N1 Subtype/metabolism , Influenza A Virus, H1N1 Subtype/physiology , Influenza A Virus, H3N2 Subtype/drug effects , Influenza A Virus, H3N2 Subtype/growth & development , Influenza A Virus, H3N2 Subtype/metabolism , Influenza A Virus, H3N2 Subtype/physiology , Influenza A Virus, H7N9 Subtype/drug effects , Influenza A Virus, H7N9 Subtype/growth & development , Influenza A Virus, H7N9 Subtype/metabolism , Influenza A Virus, H7N9 Subtype/physiology , Influenza A virus/growth & development , Influenza A virus/metabolism , Influenza A virus/physiology , Membrane Glycoproteins/genetics , Metapneumovirus/growth & development , Metapneumovirus/metabolism , Metapneumovirus/physiology , Peptide Hydrolases/metabolism , Protease Inhibitors/pharmacology , Recombinant Proteins/pharmacology , Serine Endopeptidases/metabolism , Serine Proteinase Inhibitors/metabolism , Trypsin Inhibitors/metabolism , Trypsin Inhibitors/pharmacology
5.
J Microbiol Biotechnol ; 29(12): 2006-2013, 2019 Dec 28.
Article in English | MEDLINE | ID: mdl-31581384

ABSTRACT

The isolation of respiratory viruses, especially from clinical specimens, often shows poor efficiency with classical cell culture methods. The lack of suitable methods to generate virus particles inhibits the development of diagnostic assays, treatments, and vaccines. We compared three inoculation methods, classical cell culture, the addition of a JAK2 inhibitor AZD1480, and centrifugation-enhanced inoculation (CEI), to replicate human respiratory syncytial virus (HRSV) and human metapneumovirus (HMPV). In addition, a combined method using AZD1480 treatment and CEI was used on throat swabs to verify that this method could increase virus isolation efficiency from human clinical specimens. Both CEI and AZD1480 treatment increased HRSV and HMPV genome replication. Also, the combined method using CEI and AZD1480 treatment enhanced virus proliferation synergistically. The combined method is particularly suited for the isolation of interferon-sensitive or slowly growing viruses from human clinical specimens.


Subject(s)
Centrifugation/methods , Pneumovirus/isolation & purification , Pyrazoles/pharmacology , Pyrimidines/pharmacology , Virus Cultivation/methods , Humans , Metapneumovirus/drug effects , Metapneumovirus/genetics , Metapneumovirus/growth & development , Metapneumovirus/isolation & purification , Pneumovirus/drug effects , Pneumovirus/growth & development , Respiratory Syncytial Virus, Human/drug effects , Respiratory Syncytial Virus, Human/genetics , Respiratory Syncytial Virus, Human/growth & development , Respiratory Syncytial Virus, Human/isolation & purification , Specimen Handling , Virus Replication
6.
PLoS One ; 14(4): e0215822, 2019.
Article in English | MEDLINE | ID: mdl-31013314

ABSTRACT

Human metapneumovirus (HMPV) has been a notable etiological agent of acute respiratory infection in humans, but it was not discovered until 2001, because HMPV replicates only in a limited number of cell lines and the cytopathic effect (CPE) is often mild. To promote the study of HMPV, several groups have generated green fluorescent protein (GFP)-expressing recombinant HMPV strains (HMPVGFP). However, the growing evidence has complicated the understanding of cell line specificity of HMPV, because it seems to vary notably among HMPV strains. In addition, unique A2b clade HMPV strains with a 180-nucleotide duplication in the G gene (HMPV A2b180nt-dup strains) have recently been detected. In this study, we re-evaluated and compared the cell line specificity of clinical isolates of HMPV strains, including the novel HMPV A2b180nt-dup strains, and six recombinant HMPVGFP strains, including the newly generated recombinant HMPV A2b180nt-dup strain, MG0256-EGFP. Our data demonstrate that VeroE6 and LLC-MK2 cells generally showed the highest infectivity with any clinical isolates and recombinant HMPVGFP strains. Other human-derived cell lines (BEAS-2B, A549, HEK293, MNT-1, and HeLa cells) showed certain levels of infectivity with HMPV, but these were significantly lower than those of VeroE6 and LLC-MK2 cells. Also, the infectivity in these suboptimal cell lines varied greatly among HMPV strains. The variations were not directly related to HMPV genotypes, cell lines used for isolation and propagation, specific genome mutations, or nucleotide duplications in the G gene. Thus, these variations in suboptimal cell lines are likely intrinsic to particular HMPV strains.


Subject(s)
Cell Line/virology , Cytopathogenic Effect, Viral/genetics , Metapneumovirus/growth & development , Respiratory Tract Infections/virology , A549 Cells , Green Fluorescent Proteins/genetics , HEK293 Cells , HeLa Cells , Humans , Metapneumovirus/genetics , Metapneumovirus/pathogenicity , Respiratory Tract Infections/genetics , Respiratory Tract Infections/prevention & control
7.
Intervirology ; 61(3): 149-154, 2018.
Article in English | MEDLINE | ID: mdl-30145592

ABSTRACT

BACKGROUND/AIMS: Human metapneumovirus (hMPV) is an important human respiratory pathogen and is implicated in an array of respiratory illnesses, ranging from asymptomatic infection to severe bronchiolitis. Currently, there is no reliable vaccine or specific antiviral therapy for hMPV infection and treatment is supportive. The use of ribonucleic acid interference has the potential to change that with the targeting of essential viral genes via small interfering RNAs (siRNAs) offering the ability to directly and rapidly treat viral infections. METHOD: The human lung carcinoma epithelial cell line, A549, was transfected with siRNAs targeting the N and P genes before infecting with hMPV A2 CAN97-83. Viral growth inhibition was then measured by the viral plaque assay and nucleoprotein (N) and phosphoprotein (P) gene knockdown was determined by real-time PCR. RESULTS: In vitro prophylactic use of siRNAs targeting the 3'-abundantly expressed N and P genes of hMPV resulted in potent, sequence-specific viral inhibition. The viral inhibition was specific and not mediated by an anti-viral interferon-ß response or cell death. CONCLUSION: The findings presented here confirmed the highly potent, sequence-specific antiviral effect of siRNAs targeting the N and P gene of hMPV. These results may facilitate the development of a novel therapeutic agent for hMPV control.


Subject(s)
Metapneumovirus/growth & development , Metapneumovirus/genetics , Nucleoproteins/genetics , Phosphoproteins/genetics , RNA Interference , A549 Cells , Gene Knockdown Techniques , Genes, Viral , Humans , RNA, Small Interfering/genetics , RNA, Viral/genetics , Transfection , Viral Proteins/genetics
8.
J Virol Methods ; 259: 1-9, 2018 09.
Article in English | MEDLINE | ID: mdl-29807042

ABSTRACT

Human metapneumovirus (HMPV) is a non-segmented, negative strand RNA virus belonging to the family Pneumoviridae, previously a subfamily of Paramyxoviridae. It is a leading cause of lower respiratory tract infection in infants, children, and adults with underlying medical conditions. HMPV grows poorly in cell culture and requires trypsin to cleave and mature the virus particles, which adds to the challenge of HMPV research. Currently, an indirect immuno-staining assay is commonly used to titrate HMPV, which is time-consuming and costly. In order to simplify virus quantification for HMPV, a direct plaque assay was developed. By optimizing trypsin concentration and other supplements in the agarose overlay, it was found that HMPV strains from all four subgroups formed clear and countable plaques 5-7 days post-infection. Animal tissue homogenate can also be directly titrated with this assay. Compared with the traditional assay, the direct plaque assay yields similar titer result, but saves time and eliminates the use of antibodies. Potentially, it can also be applied to plaque purification for HMPV clinical isolates. The direct plaque assay will be a valuable tool in HMPV research.


Subject(s)
Metapneumovirus/growth & development , Paramyxoviridae Infections/virology , Trypsin/metabolism , Viral Load/methods , Viral Plaque Assay/methods , Humans
9.
Pathog Dis ; 76(2)2018 03 01.
Article in English | MEDLINE | ID: mdl-29617859

ABSTRACT

Human metapneumovirus (hMPV) has been identified as a major cause of lower respiratory tract infection in children. Epidemiological and molecular evidence has highlighted an association between severe childhood respiratory viral infection and chronic lung diseases, such as asthma and chronic obstructive pulmonary disease. Currently, animal models have demonstrated the ability of hMPV to persist in vivo suggesting a role of the virus in asthma development in children. However, mechanisms involved in hMPV persistence in the respiratory tract are not yet understood. In the present study we monitored hMPV infection in human alveolar epithelial A549 cells in order to understand if the virus is able to persist in these cells upon acute infection. Our data show that hMPV initially induces an apoptotic process in A549 cells through poly (ADP-ribose) polymerase 1 cleavage, caspase-3/7 activation and Wee1 activity. The hMPV-infected cells were then able to overcome the apoptotic pathway and cell cycle arrest in G2/M by expressing B-cell lymphoma 2 and to acquire a reservoir cell phenotype with constant production of infectious virus. These findings provide evidence of the ability of hMPV to persist in alveolar epithelial cells and help in understanding the mechanisms responsible for hMPV persistence in the human respiratory tract.


Subject(s)
Alveolar Epithelial Cells/physiology , Alveolar Epithelial Cells/virology , Apoptosis , Host-Pathogen Interactions , Metapneumovirus/growth & development , A549 Cells , Humans , Models, Biological , Paramyxoviridae Infections/pathology , Paramyxoviridae Infections/virology
10.
Microbiol Immunol ; 61(11): 497-506, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28940687

ABSTRACT

Isolation of human metapneumovirus (HMPV) from clinical specimens is currently inefficient because of the lack of a cell culture system in which a distinct cytopathic effect (CPE) occurs. The cell lines LLC-MK2, Vero and Vero E6 are used for isolation of HMPV; however, the CPE in these cell lines is subtle and usually requires a long observation period and sometimes blind passages. Thus, a cell line in which an early and distinct CPE occurs following HMPV inoculation is highly desired by clinical virology laboratories. In this study, it was demonstrated that, in the human malignant melanoma cell line MNT-1, obvious syncytium formation occurs shortly after inoculation with HMPV-positive clinical specimens. In addition, the growth and efficiency of isolation of HMPV were greater using MNT-1 than using any other conventional cell line. Addition of this cell line to our routine viral isolation system for clinical specimens markedly enhanced isolation frequency, allowing isolation-based surveillance. MNT-1 has the potential to facilitate clinical and epidemiological studies of HMPV.


Subject(s)
Melanoma/virology , Metapneumovirus/physiology , Skin Neoplasms/virology , Cell Line, Tumor , Cytopathogenic Effect, Viral , Humans , Metapneumovirus/genetics , Metapneumovirus/growth & development , Metapneumovirus/isolation & purification , Melanoma, Cutaneous Malignant
11.
J Gen Virol ; 98(6): 1174-1180, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28613142

ABSTRACT

Human metapneumovirus (HMPV) is an important cause of respiratory tract infections. The mechanism by which its fusion (F) protein is responsible for variable cytopathic effects in vitro remains unknown. We aligned the F sequences of the poorly fusogenic B2/CAN98-75 strain and the hyperfusogenic A1/C-85473 strain and identified divergent residues located in the two functional heptad repeats domains (HRA and HRB). We generated recombinant viruses by inserting the mutations N135T-G139N-T143K-K166E-E167D in HRA and/or K479R-N482S in HRB, corresponding to swapped sequences from C-85473, into CAN98-75 background and investigated their impact on in vitro phenotype and fusogenicity. We demonstrated that the five HRA mutations enhanced the fusogenicity of the recombinant rCAN98-75 virus, almost restoring the phenotype of the wild-type rC-85473 strain, whereas HRB substitutions alone had no significant effect on cell-cell fusion. Altogether, our results support the importance of the HRA domain for an HMPV-triggered fusion mechanism and identify key residues that modulate syncytium formation.


Subject(s)
Cell Fusion , Giant Cells/virology , Metapneumovirus/growth & development , Mutant Proteins/metabolism , Mutation , Viral Fusion Proteins/metabolism , Animals , Cell Line , DNA Mutational Analysis , Epithelial Cells/physiology , Epithelial Cells/virology , Macaca mulatta , Metapneumovirus/genetics , Models, Molecular , Mutant Proteins/chemistry , Mutant Proteins/genetics , Protein Conformation , Protein Domains , Recombination, Genetic , Reverse Genetics , Viral Fusion Proteins/chemistry , Viral Fusion Proteins/genetics
12.
Expert Rev Anti Infect Ther ; 15(6): 545-568, 2017 06.
Article in English | MEDLINE | ID: mdl-28277820

ABSTRACT

INTRODUCTION: Influenza-Like Illness is a leading cause of hospitalization in children. Disease burden due to influenza and other respiratory viral infections is reported on a population level, but clinical scores measuring individual changes in disease severity are urgently needed. Areas covered: We present a composite clinical score allowing individual patient data analyses of disease severity based on systematic literature review and WHO-criteria for uncomplicated and complicated disease. The 22-item ViVI Disease Severity Score showed a normal distribution in a pediatric cohort of 6073 children aged 0-18 years (mean age 3.13; S.D. 3.89; range: 0 to 18.79). Expert commentary: The ViVI Score was correlated with risk of antibiotic use as well as need for hospitalization and intensive care. The ViVI Score was used to track children with influenza, respiratory syncytial virus, human metapneumovirus, human rhinovirus, and adenovirus infections and is fully compliant with regulatory data standards. The ViVI Disease Severity Score mobile application allows physicians to measure disease severity at the point-of care thereby taking clinical trials to the next level.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Mobile Applications/statistics & numerical data , Respiratory Tract Infections/diagnosis , Respiratory Tract Infections/drug therapy , Adenoviridae/drug effects , Adenoviridae/growth & development , Adenoviridae/pathogenicity , Adolescent , Child , Child, Preschool , Clinical Trials as Topic , Coinfection , Female , Humans , Infant , Influenza A virus/drug effects , Influenza A virus/growth & development , Influenza A virus/pathogenicity , Influenza B virus/drug effects , Influenza B virus/growth & development , Influenza B virus/pathogenicity , Male , Metapneumovirus/drug effects , Metapneumovirus/growth & development , Metapneumovirus/pathogenicity , Respiratory Syncytial Virus, Human/drug effects , Respiratory Syncytial Virus, Human/growth & development , Respiratory Syncytial Virus, Human/pathogenicity , Respiratory Tract Infections/pathology , Respiratory Tract Infections/virology , Rhinovirus/drug effects , Rhinovirus/growth & development , Rhinovirus/pathogenicity , Severity of Illness Index
13.
J Virol ; 90(24): 11231-11246, 2016 Dec 15.
Article in English | MEDLINE | ID: mdl-27707927

ABSTRACT

The entry of avian metapneumovirus (aMPV) into host cells initially requires the fusion of viral and cell membranes, which is exclusively mediated by fusion (F) protein. Proteolysis of aMPV F protein by endogenous proteases of host cells allows F protein to induce membrane fusion; however, these proteases have not been identified. Here, we provide the first evidence that the transmembrane serine protease TMPRSS12 facilitates the cleavage of subtype B aMPV (aMPV/B) F protein. We found that overexpression of TMPRSS12 enhanced aMPV/B F protein cleavage, F protein fusogenicity, and viral replication. Subsequently, knockdown of TMPRSS12 with specific small interfering RNAs (siRNAs) reduced aMPV/B F protein cleavage, F protein fusogenicity, and viral replication. We also found a cleavage motif in the aMPV/B F protein (amino acids 100 and 101) that was recognized by TMPRSS12. The histidine, aspartic acid, and serine residue (HDS) triad of TMPRSS12 was shown to be essential for the proteolysis of aMPV/B F protein via mutation analysis. Notably, we observed TMPRSS12 mRNA expression in target organs of aMPV/B in chickens. Overall, our results indicate that TMPRSS12 is crucial for aMPV/B F protein proteolysis and aMPV/B infectivity and that TMPRSS12 may serve as a target for novel therapeutics and prophylactics for aMPV. IMPORTANCE: Proteolysis of the aMPV F protein is a prerequisite for F protein-mediated membrane fusion of virus and cell and for aMPV infection; however, the proteases used in vitro and vivo are not clear. A combination of analyses, including overexpression, knockdown, and mutation methods, demonstrated that the transmembrane serine protease TMPRSS12 facilitated cleavage of subtype B aMPV (aMPV/B) F protein. Importantly, we located the motif in the aMPV/B F protein recognized by TMPRSS12 and the catalytic triad in TMPRSS12 that facilitated proteolysis of the aMPV/B F protein. This is the first report on TMPRSS12 as a protease for proteolysis of viral envelope glycoproteins. Our study will shed light on the mechanism of proteolysis of aMPV F protein and pathogenesis of aMPV.


Subject(s)
Host-Pathogen Interactions , Metapneumovirus/genetics , Paramyxoviridae Infections/enzymology , Poultry Diseases/enzymology , Viral Fusion Proteins/chemistry , Amino Acid Sequence , Animals , Animals, Newborn , Cell Line , Chickens , Chlorocebus aethiops , Cricetulus , Epithelial Cells/enzymology , Epithelial Cells/immunology , Epithelial Cells/virology , Fibroblasts/enzymology , Fibroblasts/immunology , Fibroblasts/virology , Gene Expression Regulation , Metapneumovirus/growth & development , Metapneumovirus/immunology , Models, Molecular , Paramyxoviridae Infections/immunology , Paramyxoviridae Infections/virology , Poultry Diseases/immunology , Poultry Diseases/virology , Protein Domains , Protein Structure, Secondary , Proteolysis , RNA, Small Interfering/genetics , RNA, Small Interfering/metabolism , Signal Transduction , Vero Cells , Viral Fusion Proteins/antagonists & inhibitors , Viral Fusion Proteins/genetics , Viral Fusion Proteins/metabolism , Virus Internalization , Virus Replication
14.
Virus Res ; 220: 129-35, 2016 07 15.
Article in English | MEDLINE | ID: mdl-27130629

ABSTRACT

In this study, we evaluated the immune responses of avian metapneumovirus harboring chicken Fc molecule. Stable Vero cells expressing chicken Fc chimera on its surface (Vero-cFc) were established, and we confirmed that aMPV grown in Vero-cFc incorporated host derived chimera Fc into the aMPV virions. Immunization of chicken with aMPV-cFc induced higher level of antibodies and inflammatory cytokines; (Interferon (IFN)-γ and Interleukin (IL)-1ß) compared to those of aMPV. The increased levels of antibodies and inflammatory cytokines in chicken immunized with aMPV-cFc were statistically significantly (p<0.05) to that of aMPV and control. The aMPV-cFc group also generated the highest neutralizing antibody response. After challenges, chickens immunized with aMPV-cFc showed much less pathological signs in nasal turbinates and trachea so that we could confirm aMPV-cFc induced higher protection than that of aMPV. The greater ability of aMPV harboring chicken Fc to that of aMPV presented it as a possible vaccine candidate.


Subject(s)
Antibodies, Neutralizing/biosynthesis , Antibodies, Viral/biosynthesis , Chickens/immunology , Immunoglobulin Fc Fragments/genetics , Paramyxoviridae Infections/veterinary , Poultry Diseases/prevention & control , Viral Vaccines/administration & dosage , Animals , Chickens/virology , Chlorocebus aethiops , Gene Expression , Immunization , Interferon-gamma/biosynthesis , Interferon-gamma/immunology , Interleukin-1beta/biosynthesis , Interleukin-1beta/immunology , Metapneumovirus/drug effects , Metapneumovirus/growth & development , Metapneumovirus/immunology , Paramyxoviridae Infections/immunology , Paramyxoviridae Infections/prevention & control , Paramyxoviridae Infections/virology , Plasmids/chemistry , Plasmids/immunology , Poultry Diseases/immunology , Poultry Diseases/virology , Recombinant Fusion Proteins/administration & dosage , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/immunology , Vero Cells , Viral Proteins/genetics , Viral Proteins/immunology , Viral Vaccines/genetics , Viral Vaccines/immunology
15.
Anal Chem ; 87(20): 10247-54, 2015 Oct 20.
Article in English | MEDLINE | ID: mdl-26376123

ABSTRACT

The rapid, sensitive, and specific identification of infectious pathogens from clinical isolates is a critical need in the hospital setting. Mass spectrometry (MS) has been widely adopted for identification of bacterial pathogens, although polymerase chain reaction remains the mainstay for the identification of viral pathogens. Here, we explored the capability of MS for the detection of human metapneumovirus (HMPV), a common cause of respiratory tract infections in children. Liquid chromatography-tandem mass spectrometry (LC-MS/MS) sequencing of a single HMPV reference strain (CAN97-83) was used to develop a multiple reaction monitoring (MRM) assay that employed stable isotope-labeled peptide internal standards for quantitation of HMPV. Using this assay, we confirmed the presence of HMPV in viral cultures from 10 infected patients and further assigned genetic lineage based on the presence/absence of variant peptides belonging to the viral matrix and nucleoproteins. Similar results were achieved for primary clinical samples (nasopharyngeal aspirates) from the same individuals. As validation, virus lineages, and variant coding sequences, were confirmed by next-generation sequencing of viral RNA obtained from the culture samples. Finally, separate dilution series of HMPV A and B lineages were used to further refine and assess the robustness of the assay and to determine limits of detection in nasopharyngeal aspirates. Our results demonstrate the applicability of MRM for identification of HMPV, and assignment of genetic lineage, from both viral cultures and clinical samples. More generally, this approach should prove tractable as an alternative to nucleic-acid based sequencing for the multiplexed identification of respiratory virus infections.


Subject(s)
Metapneumovirus/chemistry , Metapneumovirus/growth & development , Paramyxoviridae Infections/virology , Proteome/analysis , Proteomics , Viral Proteins/analysis , Cells, Cultured , Chromatography, Liquid , Humans , Metapneumovirus/genetics , Metapneumovirus/isolation & purification , RNA, Viral/analysis , RNA, Viral/genetics , Tandem Mass Spectrometry
16.
Vopr Virusol ; 57(4): 19-23, 2012.
Article in Russian | MEDLINE | ID: mdl-23012979

ABSTRACT

The reproduction of the metapneumovirus was comparatively studied in 19 human and animal cell lines. The most sensitive transplanted cell lines were found to be human Chang Conjunctiva (clone 1-5C4) and animal cell lines of feline kidney CRFK.


Subject(s)
Cell Culture Techniques/methods , Cell Line/virology , Metapneumovirus/growth & development , Virus Replication/genetics , Animals , Cats , Dogs , Humans , Metapneumovirus/genetics , Mice , Paramyxoviridae Infections/virology
17.
Vaccine ; 30(2): 231-6, 2012 Jan 05.
Article in English | MEDLINE | ID: mdl-22085552

ABSTRACT

This study was to evaluate the replication and pathogenicity of attenuated human metapneumovirus (HMPV) mutants in severe combined immunodeficiency (SCID) mice. SCID mice were intranasally infected with either wild type GFP-rHMPV (WT), or mutant viruses (M1, M2 and M4) with the N-linked glycosylation(s) of the F protein removed. The organs were collected for viral isolation, titration, pulmonary histopathology and mRNA detection by PCR at different time points. WT or mutant viruses were successfully isolated from the lungs of infected mice after inoculation. The titers of WT and M1 peaked on 5th day and remained detectable until 14th day post-inoculation. M2 reached approximately 4 logs lower titer on 5th and 9th day post-inoculation as compared to WT and M1. M4 showed similar growth kinetics to M2. Viral signal was never detected from the heart, liver, spleen, kidney and brain on 5th day post-inoculation. The pulmonary pathology score in the M1 infected mice was similar to WT infected mice but higher than in M2 or M4 infected mice. WT and HMPV mutants can thus only replicate in the lungs of SCID mice. Attenuated M2 and M4 may be considered as candidates for the preparation of vaccine against HMPV.


Subject(s)
Metapneumovirus/growth & development , Metapneumovirus/pathogenicity , Mutation , Paramyxoviridae Infections/immunology , Paramyxoviridae Infections/virology , Severe Combined Immunodeficiency/complications , Viral Fusion Proteins/genetics , Animal Structures/pathology , Animal Structures/virology , Animals , Disease Models, Animal , Female , Lung/pathology , Lung/virology , Metapneumovirus/genetics , Mice , Mice, SCID , Paramyxoviridae Infections/pathology , Time Factors , Viral Load , Virulence , Virulence Factors/genetics
18.
Vaccine ; 28(41): 6800-7, 2010 Sep 24.
Article in English | MEDLINE | ID: mdl-20656031

ABSTRACT

Modifications to F, G and SH genes of an avian metapneumovirus (AMPV) field isolate were made by reverse genetics and their virulence and protective capacity were tested in young turkeys. Infection of one-day-old turkeys with a subtype A AMPV neither caused disease nor stimulated detectable protection against subsequent virulent challenge. While serial passage of this virus in tracheal tissue increased virulence, protection stimulated remained moderate. Substitution of the fusion protein from a protective AMPV very minimally increasing virulence but dramatically increased induced protection; and this was associated with five amino acid substitutions all involving charged amino acids which computational analysis predicted to affect protein surface properties but not immunodominant helper T-lymphocyte antigenic sites. When SH or G genes were deleted, viruses caused no disease but still conferred full protection to the majority of turkeys. In the case of the SH deletion, shed virus post-inoculation was undetectable. Partial SH deletions were found to confer protection related to the length of SH open reading frame remaining. Removal of both SH and G genes together produced a virus conferring negligible protection. We conclude that the characteristics of the AMPV fusion protein are important in inducing protection while the SH and G genes under investigation played a lesser role.


Subject(s)
Amino Acid Substitution , Metapneumovirus/genetics , Paramyxoviridae Infections/veterinary , Poultry Diseases/prevention & control , Viral Proteins/immunology , Animals , Chlorocebus aethiops , Gene Deletion , Metapneumovirus/growth & development , Metapneumovirus/immunology , Metapneumovirus/pathogenicity , Organ Culture Techniques , Paramyxoviridae Infections/immunology , Paramyxoviridae Infections/prevention & control , Poultry Diseases/immunology , Poultry Diseases/virology , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/immunology , Turkeys/immunology , Vero Cells , Viral Proteins/genetics , Virulence
19.
BMC Infect Dis ; 10: 170, 2010 Jun 14.
Article in English | MEDLINE | ID: mdl-20546620

ABSTRACT

BACKGROUND: The use of cell culture for the diagnosis of human metapneumovirus (hMPV) infection is uncommon at present and molecular method such as reverse-transcription PCR (RT-PCR) has been widely and most commonly used as the preferred test. We aimed to compare the results of virus isolation using Vero E6 cells with real-time RT-PCR for the detection of hMPV, since such a comparison data is not available. METHODS: Between December 2007 and July 2008, we obtained 224 nasopharyngeal swab specimens from patients with acute respiratory infection and tested by the two methods. RESULTS: Forty-three (19.2%) were found positive by cell culture and 62 (27.7%) by real-time RT-PCR. Cell cultures were positive for 42 of 62 specimens found positive by real-time RT-PCR (67.7% sensitivity) and for 1 of 162 specimens found negative by real-time RT-PCR (99.4% specificity), respectively. The sensitivity of the cell culture was 76.2-87.5% (mean 81.8%) when specimens were collected within 3 days after the onset of symptoms, and the sensitivity decreased to 50% or less thereafter. Among specimens collected within 3 days after symptom onset, all of the real-time RT-PCR positive specimens having a viral load of more than 1.25x105 copies/ml were found positive by cell culture. CONCLUSIONS: Cell culture using Vero E6 cell line has 81.8% sensitivity compared with the real-time RT-PCR method, when specimens are collected within 3 days after the onset of symptoms. Thus, this method is a useful method for epidemiological and virological research even in facilities with minimal laboratory resources.


Subject(s)
Metapneumovirus/isolation & purification , Paramyxoviridae Infections/diagnosis , Reverse Transcriptase Polymerase Chain Reaction/methods , Virology/methods , Adolescent , Animals , Cell Culture Techniques/methods , Child , Child, Preschool , Chlorocebus aethiops , Humans , Infant , Infant, Newborn , Metapneumovirus/genetics , Metapneumovirus/growth & development , Nasopharynx/virology , Paramyxoviridae Infections/virology , Respiratory Tract Infections/virology , Sensitivity and Specificity , Vero Cells
20.
Virus Res ; 151(1): 54-9, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20380856

ABSTRACT

Human metapneumovirus (HMPV) is a paramyxovirus that is a leading cause of acute respiratory disease. HMPV is difficult to cultivate and limited published data describe the in vitro growth characteristics of the virus and its ability to replicate in different cell lines. Stability of HMPV to different temperatures or environmental conditions has not been described. Nosocomial infections due to HMPV have been reported, and thus the survival of infectious particles on environmental surfaces is important. We tested multiple cell lines for the ability to support HMPV replication both in the presence and absence of exogenous trypsin. The most permissive monkey kidney epithelial cells were LLC-MK2 and Vero, while the most permissive human airway epithelial cell line was BEAS-2B. LLC-MK2 cells were tolerant of trypsin and thus remain an ideal cell line for HMPV cultivation. Spinoculation significantly increased the infectivity of HMPV for cells in monolayer culture. Infectious virus was very stable to repeat freeze-thaw cycles, ambient room temperature, or 4 degrees C, while incubation at 37 degrees C led to degradation of virus titer. Finally, nonporous materials such as metal or plastic retained infectious virus for prolonged periods, while virus deposited on tissue and fabric rapidly lost infectivity. These findings provide guidance for laboratories attempting to culture HMPV and relevant information for infection control policies.


Subject(s)
Metapneumovirus/growth & development , Animals , Cell Line , Culture Techniques , Environment , Humans , Metapneumovirus/isolation & purification , Microbial Viability , Temperature , Trypsin/metabolism , Virus Attachment , Virus Replication
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