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1.
Genes Chromosomes Cancer ; 63(3): e23227, 2024 03.
Article in English | MEDLINE | ID: mdl-38517106

ABSTRACT

AIMS: Kinase fusion-positive soft tissue tumors represent an emerging, molecularly defined group of mesenchymal tumors with a wide morphologic spectrum and diverse activating kinases. Here, we present two cases of soft tissue tumors with novel LTK fusions. METHODS AND RESULTS: Both cases presented as acral skin nodules (big toe and middle finger) in pediatric patients (17-year-old girl and 2-year-old boy). The tumors measured 2 and 3 cm in greatest dimension. Histologically, both cases exhibited bland-looking spindle cells infiltrating adipose tissue and accompanied by collagenous stroma. One case additionally displayed perivascular hyalinization and band-like stromal collagen. Both cases exhibited focal S100 staining, and one case had patchy coexpression of CD34. Targeted RNA-seq revealed the presence of novel in-frame MYH9::LTK and MYH10::LTK fusions, resulting in upregulation of LTK expression. Of interest, DNA methylation-based unsupervised clustering analysis in one case showed that the tumor clustered with dermatofibrosarcoma protuberans (DFSP). One tumor was excised with amputation with no local recurrence or distant metastasis at 18-month follow-up. The other case was initially marginally excised with local recurrence after one year, followed by wide local excision, with no evidence of disease at 10 years of follow-up. CONCLUSIONS: This is the first reported case series of soft tissue tumors harboring LTK fusion, expanding the molecular landscape of soft tissue tumors driven by activating kinase fusions. Furthermore, studies involving a larger number of cases and integrated genomic analyses will be warranted to fully elucidate the pathogenesis and classification of these tumors.


Subject(s)
Neoplasms, Connective and Soft Tissue , Oncogene Proteins, Fusion , Skin Neoplasms , Soft Tissue Neoplasms , Adolescent , Child , Female , Humans , Male , Antigens, CD34/metabolism , Biomarkers, Tumor/genetics , Neoplasms, Connective and Soft Tissue/genetics , Neoplasms, Connective and Soft Tissue/pathology , Receptor Protein-Tyrosine Kinases , Skin Neoplasms/pathology , Soft Tissue Neoplasms/genetics , Soft Tissue Neoplasms/pathology , Oncogene Proteins, Fusion/genetics , Myosin Heavy Chains/genetics , Nonmuscle Myosin Type IIB/genetics
2.
Mod Pathol ; 37(5): 100464, 2024 May.
Article in English | MEDLINE | ID: mdl-38447752

ABSTRACT

Extraskeletal myxoid chondrosarcoma (EMC) is an uncommon mesenchymal neoplasm characteristically composed of uniform-appearing round to spindle-shaped cells with eosinophilic cytoplasm and abundant myxoid extracellular matrix. Although the majority of cases harbor a pathognomonic t(9;22) translocation that fuses EWSR1 with the orphan nuclear receptor NR4A3, there are less common variants that partner NR4A3 with TAF15, TCF12, or TFG. By immunohistochemistry, EMC has features of both cartilaginous and neuroendocrine differentiation, as evidenced by inconsistent expression of S100 protein and synaptophysin or INSM1, respectively, in a subset of cases. Given the limitations of available immunohistochemical stains for the diagnosis of EMC, we analyzed genome-wide gene expression microarray data to identify candidate biomarkers based on differential expression in EMC in comparison with other mesenchymal neoplasms. This analysis pointed to CHRNA6 as the gene with the highest relative expression in EMC (96-fold; P = 8.2 × 10-26) and the only gene with >50-fold increased expression in EMC compared with other tumors. Using RNA chromogenic in situ hybridization, we observed strong and diffuse expression of CHRNA6 in 25 cases of EMC, including both EWSR1-rearranged and TAF15-rearranged variants. All examined cases of histologic mimics were negative for CHRNA6 overexpression; however, limited CHRNA6 expression, not reaching a threshold of >5 puncta or 1 aggregate of chromogen in >25% of cells, was observed in 69 of 685 mimics (10.1%), spanning an array of mesenchymal tumors. Taken together, these findings suggest that, with careful interpretation and the use of appropriate thresholds, CHRNA6 RNA chromogenic in situ hybridization is a potentially useful ancillary histologic tool for the diagnosis of EMC.


Subject(s)
Biomarkers, Tumor , Chondrosarcoma , In Situ Hybridization , Neoplasms, Connective and Soft Tissue , Humans , Biomarkers, Tumor/genetics , Biomarkers, Tumor/analysis , Chondrosarcoma/genetics , Chondrosarcoma/pathology , Chondrosarcoma/diagnosis , Chondrosarcoma/metabolism , Neoplasms, Connective and Soft Tissue/genetics , Neoplasms, Connective and Soft Tissue/pathology , Neoplasms, Connective and Soft Tissue/diagnosis , Female , Male , Middle Aged , Aged , In Situ Hybridization/methods , Adult , Receptors, Nicotinic/genetics , Receptors, Nicotinic/metabolism , Neoplasms, Connective Tissue/genetics , Neoplasms, Connective Tissue/pathology , Neoplasms, Connective Tissue/diagnosis , Aged, 80 and over , Immunohistochemistry
3.
Am J Surg Pathol ; 48(5): 588-595, 2024 May 01.
Article in English | MEDLINE | ID: mdl-38357912

ABSTRACT

Nasal chondromesenchymal hamartoma (NCMH) is a rare benign polypoid mesenchymal tumor arising in the nasal cavity and/or paranasal sinuses. Recognizing these sporadic, rare lesions is crucial, as surgical complete removal of the mass is the common treatment approach. This retrospective study analyzed the demographics, symptoms, and imaging data of 9 patients diagnosed with NCMH between January 2017 and June 2023, possibly representing the largest single-center adult case cohort to date. Diagnostic techniques included nasal endoscopy, CT/MRI scan, immunohistological studies, and morphologic comparisons. Pathologic specimens were subjected to Sanger sequencing of exons 24 and 25 of DICER1. The average age of 9 cases was 24.4 years, and the oldest was 55 years. Four of the patients were children, ranging from 1 year old to 11 years old, with an average of 4.5 years. Nasal congestion is the most common registered symptom. Endoscopic findings showed that most patients had smooth pink neoplasms or polypoid masses in the nasal meatus. Radiologic scanning revealed soft-tissue density masses that occupied the nasal cavity. Histologically, the characteristic structure of NCMHs is immature cellular cartilage nodules and mature cartilage nodules distributed in a loose mucoid matrix. Five of the 9 patients had somatic DICER1 missense mutations. Four of the patients with DICER1-mutated NCMH exhibited a p.E1813 missense hotspot mutation. We also report a case of a rare p.P1836H missense mutation. The detected DICER1 somatic mutations provide compelling evidence of an association with the DICER1 tumor family. We emphasize the importance of pathologic consultation and the need for pathologists to accumulate experience in NCMH diagnosis to avoid misdiagnosis.


Subject(s)
Hamartoma , Neoplasms, Connective and Soft Tissue , Nose Diseases , Child , Infant , Adult , Humans , Young Adult , Retrospective Studies , Nose Diseases/genetics , Nose Diseases/diagnosis , Nose Diseases/pathology , Nasal Cavity/pathology , Hamartoma/genetics , Hamartoma/pathology , Ribonuclease III/genetics , Neoplasms, Connective and Soft Tissue/pathology , Mutation , DEAD-box RNA Helicases/genetics
4.
Am J Surg Pathol ; 46(7): 1007-1013, 2022 07 01.
Article in English | MEDLINE | ID: mdl-35220354

ABSTRACT

Three cases of primary NTRK-rearranged spindle cell neoplasm of the lung with resemblance to those described in the somatic soft tissues are presented. The patients are 2 males and 1 female with age at presentation ranging from 31 to 45 years (mean, 36 y). All the 3 tumors were discovered incidentally during physical examinations. None of the patients had any prior history of mesenchymal neoplasms anywhere else. Computed tomography revealed intrapulmonary mass located in the right upper lobe, left upper lobe, and left lower lobe, respectively. All the patients underwent lobectomy. Grossly, the tumors were described as yellowish-white solid measuring in size between 1.2 and 1.8 cm (mean, 1.5 cm). Histologically, they were characterized by monomorphic spindle cells arranged in haphazard fascicles accompanied by variable stromal collagens. Nuclear atypia was mild and mitotic activity was scarce. By immunohistochemistry, the neoplastic cells in all 3 cases showed strong and diffuse staining of CD34, pan-TRK, and TrkA with variable expression of S100 protein, whereas they were negative for cytokeratin, SOX10, ALK, α-smooth muscle actin, desmin, and STAT6. Fluorescence in situ hybridization analysis revealed NTRK1 rearrangement in all 3 cases. Subsequent next-generation sequencing identified TPM3-NTRK1 fusion in 2 cases and LMNA-NTRK1 fusion in 1 case. All 3 patients are alive without the disease (median follow-up, 9 mo; range, 4 to 87 mo). The cases present herein demonstrate that NTRK-rearranged spindle cell neoplasms may occur primarily in the lung, albeit extremely rare, and should be included in the differential diagnosis of primary pulmonary spindle cell neoplasms.


Subject(s)
Lung Neoplasms , Neoplasms, Connective and Soft Tissue , Adult , Biomarkers, Tumor/analysis , Biomarkers, Tumor/genetics , Female , Humans , Immunohistochemistry , In Situ Hybridization, Fluorescence , Lung/chemistry , Lung Neoplasms/genetics , Lung Neoplasms/pathology , Male , Middle Aged , Neoplasms, Connective and Soft Tissue/genetics , Neoplasms, Connective and Soft Tissue/pathology , Receptor, trkA/genetics
5.
Histopathology ; 80(1): 4-18, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34958503

ABSTRACT

Kinase alterations are increasingly recognised as oncogenic drivers in mesenchymal tumours. Infantile fibrosarcoma and the related renal tumour, congenital mesoblastic nephroma, were among the first solid tumours shown to harbour recurrent tyrosine kinase fusions, with the canonical ETV6::NTRK3 fusion identified more than 20 years ago. Although targeted testing has long been used in diagnosis, the advent of more robust sequencing techniques has driven the discovery of kinase alterations in an array of mesenchymal tumours. As our ability to identify these genetic alterations has improved, as has our recognition and understanding of the tumours that harbour these alterations. Specifically, this study will focus upon mesenchymal tumours harbouring NTRK or other kinase alterations, including tumours with an infantile fibrosarcoma-like appearance, spindle cell tumours resembling lipofibromatosis or peripheral nerve sheath tumours and those occurring in adults with a fibrosarcoma-like appearance. As publications describing the histology of these tumours increase so, too, do the variety kinase alterations reported, now including NTRK1/2/3, RET, MET, RAF1, BRAF, ALK, EGFR and ABL1 fusions or alterations. To date, these tumours appear locally aggressive and rarely metastatic, without a clear link between traditional features used in histological grading (e.g. mitotic activity, necrosis) and outcome. However, most of these tumours are amenable to new targeted therapies, making their recognition of both diagnostic and therapeutic import. The goal of this study is to review the clinicopathological features of tumours with NTRK and other tyrosine kinase alterations, discuss the most common differential diagnoses and provide recommendations for molecular confirmation with associated treatment implications.


Subject(s)
Fibrosarcoma/genetics , Gene Rearrangement , Neoplasms, Connective and Soft Tissue/genetics , Nephroma, Mesoblastic/genetics , Receptor, trkA/genetics , Fibrosarcoma/pathology , Humans , Neoplasm Recurrence, Local/genetics , Neoplasm Recurrence, Local/pathology , Neoplasms, Connective and Soft Tissue/pathology , Nephroma, Mesoblastic/pathology
6.
J Am Soc Cytopathol ; 11(1): 31-39, 2022.
Article in English | MEDLINE | ID: mdl-34649776

ABSTRACT

INTRODUCTION: Soft tissue myoepithelioma (STM), a rare mesenchymal neoplasm morphologically analogous to its more common salivary gland (SG) counterpart, is the subject of single case reports regarding its fine-needle aspiration (FNA) biopsy. To our knowledge, ours is the first case series of STM. MATERIALS AND METHODS: A search was made of our pathology databases for cases diagnosed as STM. FNA biopsy smears and cell blocks were performed using standard techniques. RESULTS: Seven cases were retrieved from 4 men and 3 women (M:F = 1.3:1; age range: 25-79 years, x = 54 years). All but 1 presented as a primary neoplasm. Six aspirates were from the extremities, and 1 from the abdominal wall. Mean tumor size was 5.7 cm. Cytologic diagnosis of STM or suspicious for STM was made in 3 cases (43%). Remaining FNA diagnoses were spindle cell neoplasm/lesion (2), spindle cell sarcoma (1), and extraskeletal myxoid chondrosarcoma (1). Three cases were composed primarily or solely of uniform spindle cells, 3 primarily of uniform epithelioid cells with plasmacytoid features, and 1 case a mixture of these 2 cell types. Myxoid/chondromyxoid stroma was relatively abundant except in the single hypocellular example. Immunohistochemical (IHC) testing performed in 71% was nonspecific, but positive with S-100 in 4 of 5, EMA in 3 of 3, calponin in 2 of 2, and keratin in 1 of 3 examples. CONCLUSION: FNA biopsy smears of STM are remarkably similar cytomorphologically to their SG equivalent. However, STM can be misidentified principally as extraskeletal myxoid chondrosarcoma, thus requiring a relatively broad IHC panel for a specific diagnosis.


Subject(s)
Biopsy, Fine-Needle/methods , Myoepithelioma/pathology , Soft Tissue Neoplasms/pathology , Adult , Aged , Chondrosarcoma/diagnosis , Chondrosarcoma/pathology , Female , Humans , Male , Middle Aged , Myoepithelioma/diagnosis , Neoplasms, Connective and Soft Tissue/diagnosis , Neoplasms, Connective and Soft Tissue/pathology , Sarcoma/diagnosis , Sarcoma/pathology , Soft Tissue Neoplasms/diagnosis
7.
Virchows Arch ; 480(5): 1087-1099, 2022 May.
Article in English | MEDLINE | ID: mdl-34779913

ABSTRACT

We report 10 additional cases of GLI1-altered mesenchymal tumor to further delineate its clinicopathological and molecular spectrum. There were seven males and three females with a median age of 31 years (range 1.3 ~ 75 years). Five tumors arose in the oral cavity, one each in the stomach, uterine cervix, elbow, groin, and thigh. Histologically, all cases except one were composed of monomorphic round to epithelioid cells showing an infiltrative multinodular growth pattern. The neoplastic cells were surrounded by a rich network of capillary vessels. Vessel invasion or subendothelial protrusion into the vascular space was commonly present. One tumor developed regional lymph node metastasis. The remaining case showed a predominantly spindle cell tumor. By immunohistochemistry, most tumors showed diffuse staining of CD56 (8/8) with variable expression of S100 protein (7/8). In three tumors harboring amplified genes, strong and diffuse nuclear staining of MDM2 (2/3) and CDK4 (3/3) were noted. Next-generation sequencing (NGS) studies revealed GLI1 fusions in 7 cases and GLI1 amplification in 2 cases, which were validated by fluorescence in situ hybridization (FISH) analysis in the majority of cases. One case did not show fusion gene by RNA-seq, but FISH revealed both amplification and break-apart of GLI1 gene. Follow-up information showed local recurrences in two patients. All other patients remained disease-free at the last follow-up. Our study further demonstrates that mesenchymal tumors with GLI1 alterations represent a distinctive clinicopathological entity. Although the tumor has a propensity for the tongue, it can also arise in somatic soft tissues as well as in visceral organs. Based on the characteristic morphological features and genomic profiles, we propose the term "GLI1-altered mesenchymal tumor" to describe this emerging entity.


Subject(s)
Epithelioid Cells , Neoplasms, Connective and Soft Tissue , Biomarkers, Tumor/analysis , Biomarkers, Tumor/genetics , Epithelioid Cells/pathology , Female , Humans , Immunohistochemistry , In Situ Hybridization, Fluorescence , Male , Neoplasms, Connective and Soft Tissue/pathology , Zinc Finger Protein GLI1/genetics
8.
Pathol Res Pract ; 229: 153700, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34929603

ABSTRACT

AIMS: Intracranial myxoid mesenchymal tumors (IMMTs) with fusions between EWSR1/FUS and CREB transcription factors have morphologic overlap with myxoid angiomatoid fibrous histiocytoma (mAFH) and myoepithelial tumor/carcinoma (MET/MEC). We aimed to study the clinicopathologic and genetic spectrum of extracranial IMMT-like tumors and their relationships with mAFH and MET/MEC. METHODS: Twelve extracranial tumors harboring EWSR1/FUS-CREB fusions across different histologic groups were characterized using RNA sequencing, FISH and/or RT-PCR. RESULTS: There were 4 IMMT-like neoplasms, 3 MET/MECs, and 5 mAFHs from the tibia (n=1), oral cavity (n=2), and soft tissues (n=9; 5 in the extremities), harboring EWSR1-ATF1 in 4 cases, FUS-CREM and EWSR1-CREM in 3 each, and EWSR1-CREB1 in 2. Multinodular growth, reticular/cording/trabecular arrangements, myxocollagenous matrix, and lymphocytic infiltrates variably prevailed among the 3 groups. mAFHs were characterized by cells with syncytial cytoplasm. IMMT-like neoplasms and MET/MECs shared cells with distinct boundaries, but only MET/MECs expressed GFAP and/or S100. MUC4 and ALK were expressed in some IMMT-like neoplasms (2/4; 2/4) and mAFH (2/5; 1/5). Pan-TRK reactivity was observed in two IMMT-like neoplasms with upregulated NTRK3 mRNA and one MEC. Local recurrences, typically ≥ 12 months postoperatively, developed in 2/3 IMMT-like neoplasms, 1/2 MET/MECs, and 0/4 mAFHs with follow-up. No definite associations were found between fusion types and histology, immunoprofile or outcome. CONCLUSIONS: We demonstrated the similarities and differences among 3 extracranial myxocollagenous tumor groups sharing EWSR1/FUS-CREB fusions. Oral IMMT-like neoplasms harboring FUS-CREM or EWSR1-ATF1 and FUS-CREM-positive.


Subject(s)
Brain Neoplasms/diagnosis , Brain Neoplasms/etiology , CREB-Binding Protein/physiology , Neoplasms, Connective and Soft Tissue/diagnosis , Neoplasms, Connective and Soft Tissue/etiology , Adult , Aged , Brain Neoplasms/pathology , Female , Humans , Male , Middle Aged , Neoplasm Invasiveness , Neoplasms, Connective and Soft Tissue/pathology , Young Adult
9.
Diagn Pathol ; 16(1): 87, 2021 Sep 30.
Article in English | MEDLINE | ID: mdl-34592995

ABSTRACT

BACKGROUND: Soft tissue perineurioma of the kidney is rare, with only a few reported cases. We report two additional cases with histologic, immunohistochemical and genetic analyses. CASE PRESENTATION: Both tumors were from adults (1 female aged 49 years and 1 male aged 42 years) and grossly had maximum diameters of 6.5 and 10 cm, respectively. The tumors were overall well circumscribed but unencapsulated, with focally entrapped benign native renal tubules in one case; both tumors seemed to arise in the capsular areas. The tumors had histologic and immunohistochemical profiles consistent with soft tissue perineurioma. Fluorescence in situ hybridization analyses demonstrated that the tumors were negative for amplification of MDM2 and rearrangements of ESWR1, FUS, and KMT2A. Targeted next-generation sequencing revealed a low tumor mutation burden and likely pathogenic mutations (CYP2B6 and FLT1 mutations for 1 each). Follow-up data were available for both patients; neither had tumor recurrence or metastasis. CONCLUSIONS: In conclusion, renal perineurioma is rare, usually arises in the capsular areas, and is cured by resection. Low-grade dedifferentiated liposarcoma and low-grade fibromyxoid sarcoma as well as other spindle cell lesions should be considered in the differential diagnosis.


Subject(s)
Kidney Neoplasms/diagnosis , Neoplasms, Connective and Soft Tissue/diagnosis , Nerve Sheath Neoplasms/diagnosis , Adult , Biomarkers, Tumor/analysis , Biomarkers, Tumor/genetics , Biopsy , DNA Mutational Analysis , Diagnosis, Differential , Female , Gene Amplification , Gene Rearrangement , High-Throughput Nucleotide Sequencing , Humans , Immunohistochemistry , In Situ Hybridization, Fluorescence , Kidney Neoplasms/chemistry , Kidney Neoplasms/genetics , Kidney Neoplasms/pathology , Male , Middle Aged , Mutation , Neoplasms, Connective and Soft Tissue/chemistry , Neoplasms, Connective and Soft Tissue/genetics , Neoplasms, Connective and Soft Tissue/pathology , Nerve Sheath Neoplasms/chemistry , Nerve Sheath Neoplasms/genetics , Nerve Sheath Neoplasms/pathology , Predictive Value of Tests
10.
Acta Cytol ; 65(6): 541-548, 2021.
Article in English | MEDLINE | ID: mdl-34569497

ABSTRACT

Myxoid leiomyosarcoma (MLS) is a rare variant of leiomyosarcoma, with most cases occurring in the uterus. A case of MLS arising in the periosteal region of the tibia, mimicking extraskeletal myxoid chondrosarcoma (EMC), is described. The evaluation included histological and cytological comparison with EMC. The patient was a 77-year-old man with a palpable mass at the anterior aspect of the right lower leg. After diagnosis by cytopathology and biopsy examination, a wide resection was performed. The resulting cytological smears were composed primarily of spindle-shaped tumor cells in a myxoid and hemorrhagic background. Histologically, the tumor showed abundant myxoid matrix and tumor cells proliferating in a cord-like to reticular pattern, exhibiting a lace-like arrangement that mimicked EMC. Although immunohistochemical findings suggested leiomyosarcoma, a diagnosis of EMC eventually was excluded by the lack of a split signal when assessed for a rearrangement of NR4A3 by chromogenic in situ hybridization. Despite histological similarity to EMC, characteristic cytological findings of EMC such as epithelioid structures with a cord-like pattern and chondroblast-like lacunar structures were not observed in the smears of this patient's MLS. We propose that cytopathological examination of bone and soft tissue lesions is useful as a diagnostic tool in similar cases. A total diagnostic workup, including clinical, radiographic, cytopathological, histopathological, and molecular findings, is needed to ensure an accurate final diagnosis and to reduce diagnostic error.


Subject(s)
Bone Neoplasms/pathology , Chondrosarcoma/pathology , Leiomyosarcoma/pathology , Neoplasms, Connective and Soft Tissue/pathology , Tibia/pathology , Aged , Biomarkers, Tumor/analysis , Biomarkers, Tumor/genetics , Bone Neoplasms/chemistry , Bone Neoplasms/genetics , Bone Neoplasms/surgery , Chondrosarcoma/chemistry , Chondrosarcoma/genetics , DNA-Binding Proteins/genetics , Diagnosis, Differential , Gene Rearrangement , Humans , Immunohistochemistry , In Situ Hybridization , Leiomyosarcoma/chemistry , Leiomyosarcoma/genetics , Leiomyosarcoma/surgery , Male , Neoplasms, Connective and Soft Tissue/chemistry , Neoplasms, Connective and Soft Tissue/genetics , Predictive Value of Tests , Receptors, Steroid/genetics , Receptors, Thyroid Hormone/genetics , Tibia/chemistry , Tibia/surgery
12.
Genes Chromosomes Cancer ; 60(10): 709-712, 2021 10.
Article in English | MEDLINE | ID: mdl-34124809

ABSTRACT

Extraskeletal myxoid chondrosarcoma (EMC) is a rare sarcoma of uncertain differentiation, characterized by recurrent chromosomal translocation involving NR4A3 (9q22.33) in more than 90% of cases. Five fusion partners for NR4A3 have been described including: EWSR1 (22q12.2), TAF15 (17q12), FUS (16p11.2), TCF12 (15q21), and TFG (3q12.2). This report describes a patient with an EMC at the dorsum of the right foot. The tumor showed a cord-like and reticular pattern in a background of myxoid matrix. The tumor cells demonstrated an epithelioid morphology with prominent nucleoli. The tumor cells were positive for synaptophysin, GFAP, with focal positivity for CD117, S100, Cam5.2, and NSE, and negative for AE1/3, desmin, and SMA. An RNA next-generation sequencing test showed a SMARCA2-NR4A3 gene fusion which has not been previously reported. The exon 3 of SMARCA2 was fused to exon 3 of NR4A3. This fusion was confirmed by NR4A3 break-apart FISH, although both SMARCA2 (9p24.3) and NR4A3 (9q22.33) are located on chromosome 9. The tumor cells showed retained expression of INI1 and SMARCA2 by immunohistochemistry.


Subject(s)
Chondrosarcoma/pathology , DNA-Binding Proteins/genetics , High-Throughput Nucleotide Sequencing/methods , Neoplasms, Connective and Soft Tissue/pathology , Oncogene Proteins, Fusion/genetics , Receptors, Steroid/genetics , Receptors, Thyroid Hormone/genetics , Transcription Factors/genetics , Chondrosarcoma/genetics , Female , Humans , Middle Aged , Neoplasms, Connective and Soft Tissue/genetics , Prognosis
13.
Histopathology ; 79(6): 940-946, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34156713

ABSTRACT

AIMS: Clear cell (haemangioblastoma-like) stromal tumour of the lung is a newly described, rare pulmonary neoplasm. Recurrent YAP1-TFE3 gene fusions have recently been reported in three cases. We describe two additional cases and confirm the characteristic YAP1-TFE3 gene fusion. METHODS AND RESULTS: Two mesenchymal tumours of lung were identified from our soft tissue pathology consultation services and RNA sequencing was performed. Both cases were in male patients, aged 35 and 77 years. Both presented as solitary lung nodules measuring 3.9 and 7.5 cm in greatest dimension. Histopathologically, the tumours were composed of epithelioid to plump spindle cells arranged in packets and solid sheets. The cells showed fusiform to ovoid nuclei with open chromatin, variably prominent nucleoli and scant to moderate, clear to eosinophilic cytoplasm. Cytological atypia and significant mitotic activity were minimal. None of the tumours expressed lineage-specific immunophenotypical markers. Both cases were diffusely positive for nuclear TFE3. Unlike YAP1-TFE3-fused epithelioid haemangioendothelioma, for which the fusion breakpoint occurs in YAP1 exon 1 and TFE3 exons 4 or 6, the fusion breakpoints of these tumours were located in YAP1 exon 4 and TFE3 exon 7. Following complete surgical resection, neither of the tumours has recurred or metastasised (follow-up period 6-7 months). CONCLUSIONS: We validate the presence of YAP1-TFE3 gene fusion in a unique primary mesenchymal tumour of lung, adding additional support for clear cell stromal tumour of the lung as a distinct entity.


Subject(s)
Basic Helix-Loop-Helix Leucine Zipper Transcription Factors/genetics , Lung Neoplasms/genetics , Neoplasms, Connective and Soft Tissue/genetics , Oncogene Proteins, Fusion/genetics , YAP-Signaling Proteins/genetics , Adult , Aged , Humans , Lung Neoplasms/pathology , Male , Neoplasms, Connective and Soft Tissue/pathology
14.
Pathol Int ; 71(8): 548-555, 2021 Aug.
Article in English | MEDLINE | ID: mdl-34004080

ABSTRACT

Myofibroblastoma is a rare benign mesenchymal tumor typically arising in the breast. We report a diagnostically challenging case of myofibroblastoma of the breast showing a rare palisaded morphology and an uncommon desmin- and CD34-negative immunophenotype. A 73-year-old man underwent an excision for an 8 mm-sized breast mass. Histology revealed that the tumor was composed of fascicles of bland spindle cells showing prominent nuclear palisading and Verocay-like bodies. First, schwannoma, malignant peripheral nerve sheath tumor, and synovial sarcoma were suspected given the palisaded morphology. However, none of them was confirmed by immunohistochemical or molecular analyses. Next, a palisaded variant of myofibroblastoma was suspected by the morphology and coexpression of estrogen, progesterone and androgen receptors, BCL2 and CD10 in immunohistochemistry. However, the key diagnostic markers, desmin and CD34, were both negative. Finally, the diagnosis of myofibroblastoma was confirmed by detecting RB1 loss in immunohistochemistry and monoallelic 13q14 deletion (RB1 and FOXO1 loss) by fluorescence in situ hybridization assay. For the correct diagnosis of myofibroblastoma, it is important for pathologists to recognize the wide morphological spectrum, including a palisaded morphology, and the immunophenotypical variations, including desmin- and CD34-negative immunophenotypes, and to employ a comprehensive diagnostic analysis through combined histological, immunohistochemical and molecular evaluations.


Subject(s)
Antigens, CD34/analysis , Desmin/analysis , Neoplasms, Muscle Tissue , Aged , Biomarkers, Tumor/analysis , Biopsy, Fine-Needle , Breast/pathology , Breast Neoplasms, Male/diagnosis , Breast Neoplasms, Male/pathology , Chromosome Deletion , Chromosome Disorders/diagnosis , Chromosome Disorders/pathology , Chromosomes, Human, Pair 13 , Diagnosis, Differential , Humans , Immunohistochemistry , Immunophenotyping , In Situ Hybridization, Fluorescence , Male , Neoplasms, Connective and Soft Tissue/diagnosis , Neoplasms, Connective and Soft Tissue/pathology , Neoplasms, Muscle Tissue/diagnosis , Neoplasms, Muscle Tissue/pathology , Neurilemmoma/diagnosis , Neurilemmoma/pathology
15.
Am J Clin Pathol ; 156(3): 334-339, 2021 08 04.
Article in English | MEDLINE | ID: mdl-33629710

ABSTRACT

OBJECTIVES: Chordomas are rare malignant tumors with a broad differential diagnosis, including chondrosarcomas and metastatic carcinomas. Recently, insulinoma-associated protein 1 (INSM1) has gained great interest regarding the diagnosis of neuroendocrine tumors but also extraskeletal myxoid chondrosarcomas. However, its expression in chordomas remains largely unknown. METHODS: We retrospectively examined 57 chordomas for INSM1 expression. RESULTS: INSM1 expression was found in only 5% of tumors. CONCLUSIONS: This marker is rarely expressed in this type of tumor, raising questions about neuroendocrine differentiation.


Subject(s)
Carcinoma/diagnosis , Chondrosarcoma/diagnosis , Chordoma/diagnosis , Neoplasms, Connective and Soft Tissue/diagnosis , Neuroendocrine Tumors/diagnosis , Repressor Proteins/metabolism , Adolescent , Adult , Aged , Aged, 80 and over , Carcinoma/pathology , Child , Chondrosarcoma/pathology , Chordoma/pathology , Diagnosis, Differential , Female , Humans , Immunohistochemistry , Male , Middle Aged , Neoplasms, Connective and Soft Tissue/pathology , Neuroendocrine Tumors/pathology , Retrospective Studies , Young Adult
16.
J Am Soc Cytopathol ; 10(3): 293-299, 2021.
Article in English | MEDLINE | ID: mdl-32828707

ABSTRACT

INTRODUCTION: Advances in the genetics of soft tissue neoplasia have allowed for the diagnostic recognition of specific tumor types from small biopsy specimens, including those procured using the fine needle aspiration (FNA) biopsy technique. Extraskeletal myxoid chondrosarcoma (EMC) is a malignant mesenchymal neoplasm characterized by NR4A3 and, less specifically, by EWSR1 gene rearrangements. A series of EMC cytologic specimens was examined to demonstrate the diagnostic value of incorporating fluorescence in situ hybridization (FISH) testing in cytologic cases of suspected EMC. MATERIALS AND METHODS: A search was made of our cytopathology and surgical pathology databases for cases diagnosed as EMC. FNA biopsy cytology, exfoliative cytology, imprint cytology, and FISH analysis were performed and examined using standard techniques. RESULTS: A total of 16 cases of EMC were retrieved from 15 patients (male/female ratio, 2.8:1; mean age, 62 years). Of the 15 patients, 10 were new patients with primary tumors, 2 had locally recurrent tumors, and 4 had metastases. The sites included the extremities in 10 cases, the trunk in 4, serous effusion in 1, and a mediastinal lymph node in 1 case. The specific cytologic diagnoses were EMC (14 cases; 88%), suspicious for EMC (n = 1), and malignant cells (n = 1). All cases for which FISH testing was successfully used were specifically recognized as EMC. Aspirates and imprint smears consisted of uniformly rounded cells set in an opaque myxoid/chondromyxoid stroma (less abundant and more diaphanous in the effusion sample), sometimes arranged in short anastomosing cords. FNA of 1 case of an EMC cellular variant mimicked a malignant small rounded cell tumor. CONCLUSION: EMC can be added to the growing list of soft tissue neoplasms that are specifically recognizable using cytopathology, coupled with judicious application of ancillary molecular testing.


Subject(s)
Chondrosarcoma/diagnosis , Chondrosarcoma/genetics , In Situ Hybridization, Fluorescence/methods , Molecular Diagnostic Techniques/methods , Neoplasms, Connective and Soft Tissue/diagnosis , Neoplasms, Connective and Soft Tissue/genetics , Soft Tissue Neoplasms/diagnosis , Soft Tissue Neoplasms/genetics , Adult , Aged , Aged, 80 and over , Biopsy, Fine-Needle , Chondrosarcoma/pathology , DNA-Binding Proteins/genetics , Female , Gene Rearrangement , Humans , Male , Middle Aged , Neoplasms, Connective and Soft Tissue/pathology , RNA-Binding Protein EWS/genetics , Receptors, Steroid/genetics , Receptors, Thyroid Hormone/genetics , Soft Tissue Neoplasms/pathology
17.
Hum Pathol ; 109: 31-36, 2021 03.
Article in English | MEDLINE | ID: mdl-33259844

ABSTRACT

Adenomyoma of the uterus is a biphasic nodular lesion composed of a mesenchymal component with smooth muscle differentiation and a glandular epithelium. The neoplastic nature of uterine adenomyomas has been controversial because some are considered to be nodular adenomyosis. MED12 mutations are involved in the pathogenesis of uterine smooth muscle tumors (leiomyomas and leiomyosarcomas) and biphasic tumors of the breast (fibroadenomas and phyllodes tumor). To investigate the histogenesis of uterine adenomyomas, we performed pathological and genetic analyses, including Sanger sequencing of MED12. In total, 15 cases of uterine adenomyomas were retrieved and assessed for clinicopathological factors. Immunohistochemistry for smooth muscle actin, desmin, and CD10 was performed. Exon 2 of MED12 was Sanger sequenced using DNA obtained by macrodissection of the adenomyomas. For cases that were positive for somatic MED12 mutations, we next performed microdissection of the mesenchymal and epithelial components. The DNA extracted from each component was further analyzed for MED12 mutations. MED12 mutations were detected in two adenomyomas (2/15, 13%), all in a known hot spot (codon 44). In both lesions, MED12 mutations were detected in multiple spots of the mesenchymal component. The epithelial component did not harbor MED12 mutations. The relatively low frequency of MED12 mutations suggests that not all adenomyomas are leiomyomas with entrapped glands. However, the results of our study suggest that a subset of uterine adenomyomas are true mesenchymal neoplasms.


Subject(s)
Adenomyoma/genetics , Mediator Complex/genetics , Mutation/genetics , Uterine Neoplasms/genetics , Uterine Neoplasms/pathology , Adenomyoma/pathology , Adenomyosis/genetics , Adult , Biomarkers, Tumor/analysis , Breast Neoplasms/genetics , Breast Neoplasms/pathology , DNA Mutational Analysis/methods , Female , Humans , Leiomyoma/genetics , Leiomyoma/pathology , Neoplasms, Connective and Soft Tissue/genetics , Neoplasms, Connective and Soft Tissue/pathology
18.
Int J Gynecol Pathol ; 40(5): 470-476, 2021 Sep 01.
Article in English | MEDLINE | ID: mdl-33075019

ABSTRACT

Extraskeletal myxoid chondrosarcoma of the vulva is a very rare tumor, with less than 10 cases reported in the literature. We report a case of a 45-yr-old woman with extraskeletal myxoid chondrosarcoma of the vulva confirmed by EWSR1 fluorescence in situ hybridization. Given the unusual site and prominent myxoid morphology, a broad differential diagnosis and a variety of ancillary testing was required. This article aims to review extraskeletal myxoid chondrosarcoma of the vulva, the differential diagnosis of a myxoid spindle cell neoplasm of the vulva, and the diagnostic importance of immunohistochemistry and EWSR1 fluorescence in situ hybridization.


Subject(s)
Chondrosarcoma/diagnostic imaging , Neoplasms, Connective and Soft Tissue/diagnostic imaging , RNA-Binding Protein EWS/metabolism , Vulvar Neoplasms/diagnostic imaging , Chondrosarcoma/pathology , Diagnosis, Differential , Female , Humans , Immunohistochemistry , In Situ Hybridization, Fluorescence , Middle Aged , Neoplasms, Connective and Soft Tissue/pathology , RNA-Binding Protein EWS/genetics , Vulva/diagnostic imaging , Vulva/pathology , Vulvar Neoplasms/pathology
20.
Mod Pathol ; 34(1): 95-103, 2021 01.
Article in English | MEDLINE | ID: mdl-32669612

ABSTRACT

Mesenchymal tumors driven by NTRK fusions are clinically and morphologically heterogeneous. With an increasing number of clinicopathological entities being associated with NTRK fusions, the diagnostic and predictive value of the identification of NTRK fusions is uncertain. Recently, mesenchymal tumors in the gastrointestinal tract with NTRK fusions were described as gastrointestinal stromal tumors (GIST), but the nosology of such neoplasms remains controversial. We report eight mesenchymal tumors involving the gastrointestinal tract with NTRK1 or NTRK3 rearrangements. The tumors occurred in six children and two adults, five males and three females (age range 2 months-55 years; median 3.5 years), and involved the small intestine (n = 4), stomach (n = 2), rectum (n = 1), and mesentery (n = 1). Clinical outcomes were variable, ranging from relatively indolent (n = 2) to aggressive diseases (n = 2). Morphologically, the tumors were heterogeneous and could be classified in the following three groups: (1) infantile fibrosarcoma involving the gastrointestinal tract (n = 4), enriched for NTRK3 fusions; (2) low-grade CD34-positive, S100 protein-positive spindle-cell tumors, associated with NTRK1 fusions (n = 2); and (3) unclassified high-grade spindle-cell sarcomas, with NTRK1 fusions (n = 2). By immunohistochemistry, the tumors demonstrated diffuse pan-TRK expression, of variable intensity, and lacked a specific line of differentiation. Four cases expressed CD34, which was coexpressed with S100 protein in three cases. Expression of SOX10, KIT, and DOG1 was consistently absent. Molecular genetic testing identified TPM3-NTRK1 (n = 3), TPR-NTRK1, LMNA-NTRK1, and ETV6-NTRK3 (n = 2), and SPECC1L-NTRK3 in-frame gene fusions. We conclude that the evaluation of mesenchymal spindle-cell neoplasms of the gastrointestinal tract without a definitive line of differentiation should include interrogation of NTRK alterations, particularly in pediatric patients. Mesenchymal tumors of the gastrointestinal tract with NTRK rearrangements are clinically and morphologically heterogeneous, and few, if any, seem related to GIST.


Subject(s)
Biomarkers, Tumor/genetics , Gastrointestinal Neoplasms/genetics , Gastrointestinal Neoplasms/pathology , Neoplasms, Connective and Soft Tissue/genetics , Neoplasms, Connective and Soft Tissue/pathology , Adult , Child , Child, Preschool , Female , Gastrointestinal Stromal Tumors/genetics , Gastrointestinal Stromal Tumors/pathology , Gene Rearrangement , Humans , Immunohistochemistry , Infant , Male , Middle Aged , Receptor, trkA/genetics , Retrospective Studies
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