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1.
Parasitol Res ; 121(8): 2367-2377, 2022 Aug.
Article in English | MEDLINE | ID: mdl-35672535

ABSTRACT

Opisthorchiasis and related infections are persistent and substantial public health burdens from eastern Europe to southeastern and northern Asia. Snails of the family Bithyniidae act as first intermediate hosts not only for the trematodes of the family Opisthorchiidae but also for those of the family Notocotylidae. There are certain morphological similarities between the aforementioned trematode cercariae. In order to find natural local foci of opisthorchiasis, which are established primarily according to the presence of infected bithyniid snails at the area under examination, it is crucial to correctly identify the rediae and cercariae of the trematodes. The aim of our investigation was to evaluate the role of bithyniid snails in the transmission of Opisthorchiidae and Notocotylidae in ecosystems in the south of Western Siberia. We have been studying the process of bithyniid snail dissemination in Western Siberia and examining their infection by trematodes from 1994 until now. A total of 16,213 bithyniid snails in 23 water bodies (in 28 localities) of four major basins situated in the Novosibirsk region were inspected for trematode infestation. Long-term research has been conducted in the Kargat river estuary and the Ob river floodplain for 15 and 25 years, respectively. In both water bodies, the prevalence of notocotylid and opisthorchiid trematodes was positively correlated with the global land-ocean temperature index. Trematode parthenitae were identified if there were mature cercariae capable of leaving the shell of the host snail on their own. Identification to the species of opisthorchiid cercariae was verified using molecular genetic analysis methods targeting ITS2 locus. Opisthorchis felineus and Metorchis bilis, two opisthorchiid species that are potentially perilous to human health, were found in bithyniids in the Novosibirsk region. The mean prevalence of infection with notocotylid trematodes in bithyniid snails was higher than the corresponding prevalence of infection with opisthorchiid trematodes. The results of this study can be used to identify and predict natural foci of epidemiologically and/or epizootically dangerous diseases.


Subject(s)
Opisthorchiasis , Opisthorchidae , Trematoda , Animals , Cercaria , Ecosystem , Humans , Opisthorchiasis/diagnosis , Opisthorchidae/anatomy & histology , Opisthorchidae/genetics , Russia , Siberia/epidemiology , Snails , Trematoda/genetics , Water
2.
Am J Trop Med Hyg ; 106(1): 222-228, 2021 10 25.
Article in English | MEDLINE | ID: mdl-34695797

ABSTRACT

Here, we report for the first time the snail intermediate host for the Amphimerus liver fluke, a foodborne trematodiasis. In Ecuador, Amphimerus of the Opisthorchiidae family, infects humans, cats, and dogs, in the tropical Pacific-coast region. Opisthorchiidae comprising also Clonorchis sinensis, Opisthorchis sp., and Metorchis sp., have complex life cycles involving a definitive and two intermediate hosts. We identified morphologically and investigated the presence and prevalence of Amphimerus cercaria and DNA in freshwater snails collected in a human-amphimeriasis endemic region in Ecuador, extracted DNA from snail tissue and emerged cercariae, performed real-time polymerase chain reaction (PCR) with the newly developed primers and probe amplifying the Amphimerus ribosomal internal transcribed spacer 2 (ITS2) region, and sequenced the amplified DNA fragment. We collected 2,800 snails, characterized four species Aroapyrgus sp., Melanoides tuberculata, Biomphalaria cousini, and Aplexa marmorata, isolated three cercariae morphotypes. Of the 640 snails analyzed by qPCR, only Aroapyrgus and one of the three cercariae resulted positive, at a 15% infection prevalence. Polymerase chain reaction revealed that the Aroapyrgus snail and cercaria-morphotype-3 corresponded to Amphimerus, but not to C. sinensis, Fasciola hepatica, or Paragonimus mexicanus. The sequence of amplified DNA product matched that of human-isolated Amphimerus. This finding constitutes the first documentation that Aroapyrgus sp. is the first intermediate host for the Amphimerus sp. that infect humans in Ecuador. The ITS2-gene PCR and sequencing analysis demonstrated a high prevalence of snail infection and proved useful for detecting the infection in snails, which findings can help the establishment of suitable control programs against transmission in any endemic region of interest.


Subject(s)
Gastropoda/parasitology , Opisthorchidae/classification , Trematode Infections/parasitology , Animals , DNA, Helminth/chemistry , DNA, Helminth/classification , DNA, Helminth/isolation & purification , Ecuador , Fresh Water , Gastropoda/anatomy & histology , Gastropoda/classification , Humans , Opisthorchidae/anatomy & histology , Opisthorchidae/genetics , Opisthorchidae/isolation & purification , Phylogeny , Real-Time Polymerase Chain Reaction , Sequence Analysis, DNA , Trematode Infections/transmission
3.
J Microbiol Methods ; 187: 106258, 2021 08.
Article in English | MEDLINE | ID: mdl-34082051

ABSTRACT

The superfamily Opisthorchioidea encompasses the families Cryptogonimidae, Opisthorchiidae and Heterophyidae. These parasites depend on the aquatic environment and include marine and freshwater species. Some species, such as Clonorchis sinensis and Opisthorchis viverrini, have a high impact on public health with millions of infected people worldwide and have thus been the object of many studies and tool developments. However, for many species, tools for identification and detection are scarce. Although morphological descriptions have been used and are still important, they are often not efficient on the immature stages of these parasites. Thus, during the past few decades, molecular approaches for parasite identification have become commonplace. These approaches are efficient, quick and reliable. Nonetheless, for some parasites of the superfamily Opisthorchioidea, reference genomic data are limited. This study reviews available genetic data and molecular tools for the identification and/or the detection of this superfamily. Molecular data on this superfamily are mostly based on mitochondrial and ribosomal gene sequence analyses, especially on the cytochrome c oxidase subunit 1 gene and internal transcribed spacer regions respectively.


Subject(s)
DNA, Helminth/genetics , Parasitology/methods , Trematoda/classification , Animals , DNA Primers , DNA, Helminth/analysis , DNA, Mitochondrial/genetics , DNA, Ribosomal/genetics , DNA, Ribosomal Spacer/analysis , Electron Transport Complex IV/genetics , Genes, Helminth , Heterophyidae/classification , Heterophyidae/genetics , Heterophyidae/isolation & purification , Molecular Diagnostic Techniques , Nucleic Acid Amplification Techniques , Opisthorchidae/classification , Opisthorchidae/genetics , Opisthorchidae/isolation & purification , Phylogeny , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Random Amplified Polymorphic DNA Technique , Trematoda/genetics , Trematoda/isolation & purification
4.
Parasitol Int ; 75: 102055, 2020 Apr.
Article in English | MEDLINE | ID: mdl-31945467

ABSTRACT

Adult worms of Erschoviorchis anuiensis sp. n., parasites of the pancreas and liver of birds, were found by feeding the Muscovy ducks Cairina moschata dom. with freshwater fish (Phoxinus percnurus) from the Amur River basin (Russia). The trematodes obtained differ from the only previously known representative of the genus, E. lintoni by the large size of the ventral sucker, testes and ovary, the shape of the ovary (three-lobed vs irregular oval for E. lintoni), and the degree of vitellarium development (well-developed vitellarium with numerous follicles vs weakly developed vitelline fields for E. lintoni). In addition, genetic data were obtained for E. anuiensis sp. n., including nucleotide sequences of the ITS region and the 28S rRNA gene of nuclear DNA, and the mitochondrial сох1 gene. These data show that the genus Erschoviorchis is a sister group to the representatives of the genera Opisthorchis, Clonorchis, and Metorchis. At the same time, it did not cluster with species of Amphimerus, in which E. lintoni has sometimes been placed. The results of the study indicated that E. anuiensis sp. n., as well as E. lintoni, when it occurs in the pancreas, leads to significant associated pathological changes, manifested in an increase in size, changes of structure and tissue density.


Subject(s)
Bird Diseases/parasitology , Ducks , Opisthorchidae/classification , Trematode Infections/veterinary , Animals , DNA, Ribosomal Spacer/analysis , Electron Transport Complex IV/analysis , Genes, Mitochondrial , Helminth Proteins/analysis , Opisthorchidae/cytology , Opisthorchidae/enzymology , Opisthorchidae/genetics , Phylogeny , RNA, Ribosomal, 28S/analysis , Russia , Trematode Infections/parasitology
5.
Infect Genet Evol ; 78: 104125, 2020 03.
Article in English | MEDLINE | ID: mdl-31770595

ABSTRACT

Both Clonorchis sinensis and Metorchis orientalis are the fish-borne zoonotic trematodes, and have a wide distribution of southeastern Asia, especially in China. Due to the similar morphology, life cycle, and parasitic positions are difficult to differentiate between both metacercariae. In the present study, the complete rDNA sequences of five C. sinensis and five M. orientalis were obtained and compared for the first time. And the IGS rDNA sequences were tested as a genetic marker. The results showed complete rDNA lengths of C. sinensis were range from 8049 bp to 8391 bp, including 1991 bp, 1116 bp, 3854 bp, and 1088-1430 bp belonging to 18S, ITS, 28S and IGS, respectively. And the complete rDNA lengths of M. orientalis were range from 7881 bp to 9355 bp, including 1991 bp, 1077 bp, 3856 bp, and 957-2431 bp belonging to 18S, ITS, 28S and IGS, respectively. Comparative analyses reveal length difference main in IGS, which has higher intraspecific and interspecific variations than other ribosomal regions. Forty four repeat (forward and inverted) sequences were found in the complete rDNAs of C. sinensis and M. orientalis. The phylogenetic analyses showed that the sequences of ITS1, ITS2, 18S and 28S could be used as different level genetic markers. In IGS phylogenetic tree, Opisthorchiidae, Paramphistomidae, Dicrocoeliidae, and Schistosomatidae formed monophyletic groups, and the same length sequences were clustered together in the same species. These findings of the present study provide the new molecular data for studying the complete rDNA of C. sinensis and M. orientalis, and indicate IGS sequences may used as a novel genetic marker for studying intraspecific variation in trematodes.


Subject(s)
DNA, Ribosomal/genetics , Opisthorchidae/genetics , Animals , Clonorchis sinensis/genetics , DNA, Helminth/genetics , DNA, Ribosomal Spacer/genetics , Genetic Markers , Genomics , Phylogeny
6.
Exp Parasitol ; 184: 90-96, 2018 Jan.
Article in English | MEDLINE | ID: mdl-29225048

ABSTRACT

Metorchis orientalis is a neglected zoonotic parasite, living in the gallbladder and bile duct of poultry and some mammals as well as humans. In spite of its economic and medical importance, the information known about the transcriptome and genome of M. orientalis is limited. In this study, we performed de novo sequencing, transcriptome assembly and functional annotations of the adult M. orientalis, obtained about 77.4 million high-quality clean reads, among which the length of the transcript contigs ranged from 100 to 11,249 nt with mean length of 373 nt and N50 length of 919 nt. We then assembled 31,943 unigenes, of which 20,009 (62.6%) were annotated by BLASTn and BLASTx searches against the available database. Among these unigenes, 19,795 (62.0%), 3407 (10.7%), 10,620 (33.2%) of them had significant similarity in the NR, NT and Swiss-Prot databases, respectively; 5744 (18.0%) and 4678 (14.6%) unigenes were assigned to GO and COG, respectively; and 9099 (28.5%) unigenes were identified and mapped onto 256 pathways in the KEGG Pathway database. Furthermore, we found that 98 (1.08%) unigenes were related to bile secretion and 5 (0.05%) to primary bile acid biosynthesis pathways category. The characterization of these transcriptomic data has implications for the better understanding of the biology of M. orientalis, and will facilitate the development of intervention agents for this and other pathogenic flukes of human and animal health significance.


Subject(s)
Neglected Diseases/parasitology , Opisthorchidae/physiology , Transcriptome , Trematode Infections/parasitology , Zoonoses/parasitology , Animals , Bile Ducts/parasitology , Computational Biology , DNA, Complementary/biosynthesis , Ducks/parasitology , Fish Diseases/parasitology , Fish Diseases/transmission , Fishes , Gallbladder/parasitology , High-Throughput Nucleotide Sequencing , Humans , Opisthorchidae/genetics , Poultry Diseases/parasitology , RNA, Helminth/genetics , RNA, Helminth/isolation & purification , RNA, Messenger/genetics , RNA, Messenger/isolation & purification , Exome Sequencing
7.
Acta Vet Scand ; 59(1): 75, 2017 Nov 01.
Article in English | MEDLINE | ID: mdl-29089028

ABSTRACT

The intention to increase roach (Rutilus rutilus) consumption is in focus for ecological and economic reasons in Finland. However, its safety as food has not been considered comprehensively. We collected and artificially digested 85 roach halves originating from the south-eastern coast of Finland, and found trematode metacercariae in 98.8% of the samples. Based on polymerase chain reaction (PCR) and sequencing of amplicons generated from the ITS2 gene region, zoonotic parasites of the family Opistorchiidae were identified as Pseudamphistomum truncatum and Metorchis bilis, and also non-zoonotic Holostephanus dubinini (family Cyathocotylidae) and Posthodiplostomum spp. (family Diplostomidae) were identified. The species identity of other trematodes found is currently being investigated. Mixed infections of several trematode species were common. The prevalence of morphologically identified zoonotic P. truncatum was 46%, and zoonotic M. bilis was found in one sequence sample. The high prevalence of zoonotic trematode metacercariae in roach from the Gulf of Finland is alarming. Only thoroughly cooked roach products can be recommended for human or animal consumption from the area.


Subject(s)
Cyprinidae/parasitology , Fish Diseases/epidemiology , Trematoda/physiology , Trematode Infections/veterinary , Animals , Coinfection/epidemiology , Coinfection/parasitology , Coinfection/veterinary , DNA, Ribosomal Spacer/genetics , Finland/epidemiology , Fish Diseases/parasitology , Oceans and Seas , Opisthorchidae/classification , Opisthorchidae/genetics , Opisthorchidae/isolation & purification , Opisthorchidae/physiology , Prevalence , Trematoda/classification , Trematoda/genetics , Trematoda/isolation & purification , Trematode Infections/epidemiology , Trematode Infections/parasitology
8.
PLoS Negl Trop Dis ; 11(6): e0005672, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28628614

ABSTRACT

BACKGROUND: Amphimeriasis is a fish-borne disease caused by the liver fluke Amphimerus spp. that has recently been reported as endemic in the tropical Pacific side of Ecuador with a high prevalence in humans and domestic animals. The diagnosis is based on the stool examination to identify parasite eggs, but it lacks sensitivity. Additionally, the morphology of the eggs may be confounded with other liver and intestinal flukes. No immunological or molecular methods have been developed to date. New diagnostic techniques for specific and sensitive detection of Amphimerus spp. DNA in clinical samples are needed. METHODOLOGY/PRINCIPAL FINDINGS: A LAMP targeting a sequence of the Amphimerus sp. internal transcribed spacer 2 region was designed. Amphimerus sp. DNA was obtained from adult worms recovered from animals and used to optimize the molecular assays. Conventional PCR was performed using outer primers F3-B3 to verify the proper amplification of the Amphimerus sp. DNA target sequence. LAMP was optimized using different reaction mixtures and temperatures, and it was finally set up as LAMPhimerus. The specificity and sensitivity of both PCR and LAMP were evaluated. The detection limit was 1 pg of genomic DNA. Field testing was done using 44 human stool samples collected from localities where fluke is endemic. Twenty-five samples were microscopy positive for Amphimerus sp. eggs detection. In molecular testing, PCR F3-B3 was ineffective when DNA from fecal samples was used. When testing all human stool samples included in our study, the diagnostic parameters for the sensitivity and specificity were calculated for our LAMPhimerus assay, which were 76.67% and 80.77%, respectively. CONCLUSIONS/SIGNIFICANCE: We have developed and evaluated, for the first time, a specific and sensitive LAMP assay for detecting Amphimerus sp. in human stool samples. The procedure has been named LAMPhimerus method and has the potential to be adapted for field diagnosis and disease surveillance in amphimeriasis-endemic areas. Future large-scale studies will assess the applicability of this novel LAMP assay.


Subject(s)
Feces/parasitology , Molecular Diagnostic Techniques/methods , Nucleic Acid Amplification Techniques/methods , Opisthorchidae/isolation & purification , Trematode Infections/diagnosis , Animals , DNA, Helminth/genetics , DNA, Ribosomal Spacer/genetics , Ecuador , Humans , Opisthorchidae/genetics , Sensitivity and Specificity , Trematode Infections/parasitology
9.
Parasitol Int ; 66(4): 396-401, 2017 Aug.
Article in English | MEDLINE | ID: mdl-27404484

ABSTRACT

Few existing studies have dealt with cytogenetics in trematodes, largely due to the attendant technical difficulty of chromosome preparation. We performed a comparative analysis of chromosomes in five opistorchiid species, including Opisthorchis felineus Rivolta, 1884, Opisthorchis viverrini Poirier, 1886, Clonorchis sinensis Cobbold, 1875, Metorchis xanthosomus Creplin 1846, and Metorchis bilis (Braun, 1790) Odening, 1962. For some of these species, no detailed morphometric description of their karyotypes has yet been published; for the karyotype of Metorchis bilis this is the first-ever description. We found that opisthorchiids, like other trematodes, are characterized by karyotypic conservatism (N=6-7) and karyotype asymmetry, although comparison of chromosome morphometric traits did reveal differences between the karyotypes of the species. Moreover, to address certain a methodological issue in trematode chromosome preparation, we analyzed how the source of chromosomal material (partenitae or mature flukes) and the chromosome preparation techniques used (air-drying and cell suspension methods) affected chromosome spreading and size, concluding that the most reliable comparative method involves comparing relative parameters (relative length, arm ratio, centromeric index) of chromosomes prepared using the same technique.


Subject(s)
Karyotype , Karyotyping/methods , Opisthorchidae/genetics , Animals , Chromosomes/genetics , In Situ Hybridization, Fluorescence , Opisthorchidae/cytology , Species Specificity
10.
Parasitol Int ; 65(3): 258-67, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26794684

ABSTRACT

Metorchis spp. are flukes (Platyhelminthes: Digenea) that infect vertebrates, including humans, dogs, cats, poultry and wild game, with cyprinid freshwater fish serving as typical second intermediate hosts. In their definitive hosts, the Metorchis spp. are difficult to identify to species. We provide and analyze sequences of two nuclear (18S rDNA and ITS2) and two mitochondrial (CO1 and ND1) DNA loci of four morphologically identified European species of the Metorchis, namely Metorchis albidus, Metorchis bilis, Metorchis crassiusculus and Metorchis xanthosomus, and of another opisthorchiid, Euamphimerus pancreaticus. DNA analysis suggests that the Metorchis specimens identified morphologically as M. albidus (from Lutra lutra), M. bilis (from Phalacrocorax carbo) and M. crassiusculus (from Aquila heliaca and Buteo rufinus) represent a single species. Thus, M. albidus (Braun, 1893) Loos, 1899 and M. crassiusculus (Rudolphi, 1809) Looss, 1899 are recognized as junior subjective synonyms of M. bilis (Braun, 1790) Odening, 1962. We also provide comparative measurements of the Central European Metorchis spp., and address their tissue specificity and prevalence based on the examination of extensive bird cohort from 1962 to 2015. M. bilis and M. xanthosomus can be morphologically diagnosed by measuring the extent of genitalia relative to body length and by the size ratio of their suckers. They also differ in their core definitive hosts, with ducks (Anas, Aythya) and coots (Fulica) hosting M. xanthosomus, and cormorants (Phalacrocorax), the birds of prey (Buteo, Aquila, etc.), piscivorous mammals (Lutra, Vulpes, Ursus, etc.) and humans hosting M. bilis. Previous reports on the Metorchis spp. contain numerous suspected misidentifications.


Subject(s)
Opisthorchidae/classification , Trematode Infections/parasitology , Animals , Birds , DNA, Ribosomal/genetics , Humans , Mammals , Opisthorchidae/cytology , Opisthorchidae/genetics , Opisthorchidae/isolation & purification , Phylogeny , RNA, Ribosomal, 18S/genetics , Sequence Analysis, DNA , Species Specificity
11.
Parasitol Int ; 61(1): 90-3, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21740979

ABSTRACT

Superfamily Opisthorchioidea Looss, 1899 consists of three well-known families, Opisthorchiidae, Heterophyidae, and Cryptogonimidae, with basic similarities in morphology and life-cycles. Many species in the first two of these families are human pathogens, such as Opisthorchis viverrini, O. felineus, Clonorchis sinensis, Haplorchis spp. and Metagonimus spp. Recently, a molecular phylogenetic study on the classification of Digenea revealed a paraphyletic relationship between Opisthorchiidae and Heterophyidae. For our study, we gathered and analyzed all available data in GenBank, together with new data of nuclear 18S ribosomal DNA and ribosomal internal transcribed spacer 2 (ITS2) sequences of the families within the Opisthorchioidea. Maximum likelihood and Bayesian inference analyses suggested that families Opisthorchiidae and Heterophyidae are inseparable from each other, with the former nested within the latter. Groupings in molecular trees are generally consistent with morphological features used in taxonomy.


Subject(s)
DNA, Helminth/genetics , Heterophyidae/classification , Heterophyidae/genetics , Opisthorchidae/classification , Opisthorchidae/genetics , Animals , Bayes Theorem , DNA, Ribosomal Spacer/genetics , Likelihood Functions , Molecular Sequence Data , Phylogeny , RNA, Ribosomal, 18S/genetics , Sequence Alignment , Sequence Analysis, DNA , Trematoda/classification , Trematoda/genetics
12.
Parasitol Int ; 61(1): 81-3, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21708281

ABSTRACT

The analysis of telomere repeat distribution in chromosomes of five opisthorchid species (Opisthorchis felineus (Rivolta, 1884), Opisthorchis viverrini (Poirier, 1886), Metorchis xanthosomus (Creplin, 1846), Metorchis bilis (Braun, 1890), Clonorchis sinensis (Cobbold, 1875)) was performed with fluorescent in situ hybridization (FISH) of labeled (TTAGGG)n DNA-probe and PNA telomere probe on mitotic and meiotic chromosomes of these species. It was shown that chromosome telomeres of all studied species contain large clusters of (TTAGGG)n telomeric repeats. Interstitial clusters of the (TTAGGG)n repeats have not been revealed in the chromosomes of any studied species even when FISH of PNA telomere probe on pachytene chromosomes was performed. Furthermore interstitial clusters of the (TTAGGG)n repeats have not been detected in the chromosomes of O. viverrini, one of chromosomes of this species is the result of a fusion of two ancestral opisthorchid chromosomes.


Subject(s)
DNA, Helminth/analysis , Opisthorchidae/genetics , Telomere/genetics , Animals , DNA, Helminth/genetics , In Situ Hybridization, Fluorescence , Karyotype , Meiosis , Mitosis , Opisthorchidae/classification , Opisthorchidae/cytology , Peptide Nucleic Acids/analysis , Repetitive Sequences, Nucleic Acid , Species Specificity , Telomere/chemistry , Trematode Infections/parasitology
13.
Parasitol Int ; 61(1): 84-6, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21791251

ABSTRACT

Genomes of opisthorchid species are characterized by small size, suggesting a reduced amount of repetitive DNA in their genomes. Distribution of repetitive DNA sequences in the chromosomes of five species of the family Opisthorchiidae (Opisthorchis felineus 2n = 14 (Rivolta, 1884), Opisthorchis viverrini 2n = 12 (Poirier, 1886), Metorchis xanthosomus 2n = 14 (Creplin, 1846), Metorchis bilis 2n = 14 (Braun, 1890), Clonorchis sinensis 2n = 14 (Cobbold, 1875)) was studied with C- and AgNOR-banding, generation of microdissected DNA probes from individual chromosomes and fluorescent in situ hybridization on mitotic and meiotic chromosomes. Small-sized C-bands were discovered in pericentric regions of chromosomes. Ag-NOR staining of opisthorchid chromosomes and FISH with ribosomal DNA probe showed that karyotypes of all studied species were characterized by the only nucleolus organizer region in one of small chromosomes. The generation of DNA probes from chromosomes 1 and 2 of O. felineus and M. xanthosomus was performed with chromosome microdissection followed by DOP-PCR. FISH of obtained microdissected DNA probes on chromosomes of these species revealed chromosome specific DNA repeats in pericentric C-bands. It was also shown that microdissected DNA probes generated from chromosomes could be used as the Whole Chromosome Painting Probes without suppression of repetitive DNA hybridization. Chromosome painting using microdissected chromosome specific DNA probes showed the overall repeat distribution in opisthorchid chromosomes.


Subject(s)
DNA, Helminth/analysis , Opisthorchidae/genetics , Repetitive Sequences, Nucleic Acid , Animals , Chromosome Banding , Chromosome Painting , Chromosomes/genetics , DNA Probes/analysis , DNA Probes/ultrastructure , DNA, Ribosomal/analysis , DNA, Ribosomal/ultrastructure , In Situ Hybridization, Fluorescence , Karyotype , Meiosis , Microdissection , Mitosis , Nucleolus Organizer Region/ultrastructure , Opisthorchidae/cytology , Polymerase Chain Reaction , Species Specificity
14.
Parasitol Int ; 61(1): 25-31, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21840415

ABSTRACT

Liver fluke infections are gradually transforming from a local problem of individual geographic regions to a widespread problem. The observed expansion is likely to be connected with the ever-increasing intensity of traffic flow and migration of the infected carriers between cities, regions, and countries. Opisthorchis felineus, the trematode belonging to the family Opisthorchiidae, is a well known causative agent of the infection called opisthorchiasis. Metorchis bilis, also a member of the family Opisthorchiidae, causes metorchiasis, a disease very close to opisthorchiasis in symptomatology. Genetic markers can be used to develop methods for differential diagnostics of these diseases. However, the questions connected with epidemiology of these trematode infections, their clinical characteristics, prognosis and therapy remain open. This review briefs the general biological characteristics of O. felineus and M. bilis persisting in various countries of Eurasia, their geographical range, epidemiology and molecular diagnostics of these liver flukes.


Subject(s)
Opisthorchidae/anatomy & histology , Opisthorchidae/physiology , Trematode Infections/diagnosis , Trematode Infections/epidemiology , Animals , Host-Parasite Interactions , Humans , Opisthorchiasis/diagnosis , Opisthorchiasis/epidemiology , Opisthorchiasis/parasitology , Opisthorchiasis/therapy , Opisthorchidae/genetics , Opisthorchis/anatomy & histology , Opisthorchis/genetics , Opisthorchis/physiology , Russia , Species Specificity , Trematode Infections/parasitology , Trematode Infections/therapy
15.
Parasitol Int ; 61(1): 87-9, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21798365

ABSTRACT

In the present study karyotypes and chromosomes of five species of the family Opisthorchiidae (Opisthorchis felineus (Rivolta, 1884), O. viverrini (Poirier, 1886), Metorchis xanthosomus (Creplin, 1846), M. bilis (Braun, 1893), and Clonorchis sinensis (Cobbold, 1875)) were compared. Karyotypes of O. felineus, M. xanthosomus, M. bilis and C. sinensis consist of two pairs of large meta- and submetacentrics and five pairs of small chromosomes (2n = 14). The karyotype of O. viverrini is 2n = 12, which indicates a fusion of two chromosomes of opisthorchid ancestral karyotype. Analysis of mitotic and meiotic chromosomes was performed by heterologous in situ hybridization of microdissected DNA probes obtained from chromosomes 1 and 2 of O. felineus and chromosomes 1 and 2 of M. xanthosomus. Results of chromosome staining (C- and AgNOR-banding) and FISH of telomeric probes and ribosomal DNA probe on opisthorchid chromosomes were used for chromosome comparison. Data on chromosome number in opisthorchid species were also discussed.


Subject(s)
Genes, Helminth , Karyotype , Opisthorchidae/genetics , Animals , Chromosome Banding , Chromosome Painting , Genome , In Situ Hybridization, Fluorescence , Meiosis , Microdissection , Mitosis , Nucleolus Organizer Region/chemistry , Species Specificity
16.
Parasitol Int ; 60(4): 521-3, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21798366

ABSTRACT

Opisthorchiidae and Heterophyidae are classified into different families based on morphological identification. However, recent molecular phylogenetic studies suggested the possible paraphyletic relationship between these two families. In this study, the paraphyletic relationship between these two families was confirmed further by maximum likelihood and Bayesian inference analyses using the combined sequences of SSU and LSU rDNA.


Subject(s)
DNA, Ribosomal/genetics , Heterophyidae/genetics , Opisthorchidae/genetics , Trematode Infections/parasitology , Animals , Base Sequence/genetics , Bayes Theorem , Biological Evolution , DNA, Ribosomal/analysis , Heterophyidae/classification , Humans , Opisthorchidae/classification , Phylogeny , Ribosome Subunits, Large, Eukaryotic/genetics , Ribosome Subunits, Small, Eukaryotic/genetics
17.
Vet Parasitol ; 155(3-4): 209-16, 2008 Aug 17.
Article in English | MEDLINE | ID: mdl-18571328

ABSTRACT

The presence of metacercariae and adults of the trematode Pseudamphistomum truncatum in roach and mink, respectively, was recorded in Lake Fure North of Copenhagen, Denmark. This zoonotic digenean opisthorchiid represents a threat to humans due to its ability to infect the biliary system following ingestion of inadequately processed infected fish. Therefore precise species identification of infective metacercariae in fish used for human consumption is essential. Due to the relatively limited information on metacercarial identity obtained by morphometric studies a series of molecular techniques were used to link the larval parasite in fish with the un-equivocally diagnosed adults in the biliary system of the mink. By the use of carefully selected polymerase chain reaction (PCR) primers and subsequent sequencing of the ITS region from both metacercariae and adults full sequence identity of both metacercariae and adults were confirmed. The presence of this parasitosis in fish from a lake used for both commercial and recreational fisheries call for hygienic alerts in order to prevent accidental human infection with this opisthorchiid.


Subject(s)
Cyprinidae/parasitology , Fish Diseases/parasitology , Life Cycle Stages , Mink/parasitology , Opisthorchidae , Trematode Infections/veterinary , Animals , Base Sequence , Bile Ducts/parasitology , DNA, Ribosomal Spacer/genetics , Molecular Sequence Data , Opisthorchidae/anatomy & histology , Opisthorchidae/genetics , Opisthorchidae/growth & development , Phylogeny , Sequence Alignment , Sequence Homology, Nucleic Acid , Trematode Infections/parasitology
18.
Acta Trop ; 103(1): 26-32, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17574199

ABSTRACT

This study aimed to discriminate infections of two common fish-borne trematodes in Thailand, Opisthorchis viverrini from Haplorchis taichui, based on mitochondrial cytochrome c oxidase subunit I (COI) gene. Designed primers (COI-OV-Hap F&R primers) amplified partial COI fragments of O. viverrini and H. taichui with high sensitivity in different developmental stages (adult, metacercaria, and egg). Polymerase chain reaction (PCR) amplicons were generated with low genomic DNA concentration ( approximately 10(-4)ng) of O. viverrini and H. taichui at 50 and 56 degrees C annealing temperatures, respectively. At 50 degrees C, COI fragments of Clonorchis sinensis and H. taichui were also obtained, but this was less sensitive than O. viverrini. At 56 degrees C, only H. taichui could be amplified and discriminated from H. pumilio, H. yogokawai, O. viverrini, and C. sinensis. Between 50 and 56 degrees C, the PCR amplicons of H. pumilio and H. yogokawai were amplified with low specificity and low sensitivity. The genetic characters among O. viverrini, C. sinensis, and H. taichui were distinguished by PCR-RFLP method. The PCR-RFLP profiles might be useful for diagnosing mixed O. viverrini and H. taichui infections in endemic areas, and for detecting metacercariae of O. viverrini, C. sinensis and H. taichui in epidemiological surveys of infections in fish hosts.


Subject(s)
Electron Transport Complex IV/genetics , Opisthorchidae/classification , Opisthorchidae/genetics , Animals , Base Sequence , Genetic Markers/genetics , Opisthorchidae/isolation & purification , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Sensitivity and Specificity , Species Specificity
19.
Parasitol Res ; 100(4): 905-9, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17061114

ABSTRACT

Infections with the opisthorchiid liver flukes Clonorchis sinensis, Opisthorchis viverrini, and Opisthorchis felineus cause serious health problems in endemic areas of Southeast Asia and countries of the former Soviet Union. Chronic infections--even with low worm burdens--may lead to the development of fatal cholangiocarcinoma and related symptoms. A more sensitive diagnosis is needed since the tiny eggs of the worms are often not seen in microscopic examinations of stool samples, especially in patients with low infections. This communication reports a rapid cleanup procedure for human stool samples, which enables reliable identification of DNA by polymerase chain reaction from few eggs of opisthorchiid flukes in fecal samples.


Subject(s)
DNA Primers/genetics , Feces/parasitology , Opisthorchidae/genetics , Opisthorchidae/isolation & purification , Polymerase Chain Reaction/methods , Trematode Infections/diagnosis , Animals , Base Sequence , Cats , Humans , Molecular Sequence Data , Opisthorchidae/classification , Rodentia/parasitology , Sensitivity and Specificity , Species Specificity , Time Factors
20.
Parasitol Res ; 90(5): 409-14, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12748848

ABSTRACT

Adult specimens of the opisthorchiid liver fluke species Opisthorchis felineus and Metorchis bilis could be identified for the first time by molecular biological methods using species specific primers (OF and MB primers) in the polymerase chain reaction (PCR). The OF or MB primers were based on a part of the mitochondrial cytochrome c oxidase I gene. A specific product of approximately 200 bp could be amplified for O. felineus by means of the specific O. felineus primers. By contrast, the amplification of M. bilis DNA with MB primers produced a fragment of approximately 110 bp. A specificity of 100% could be demonstrated for both primer pairs. The sensitivities of the PCRs were 10 pg for the O. felineus DNA and 100 fg for the M. bilis DNA.


Subject(s)
Opisthorchidae/classification , Opisthorchis/classification , Polymerase Chain Reaction , Animals , DNA Primers , DNA, Helminth/analysis , DNA, Helminth/genetics , DNA, Mitochondrial/analysis , DNA, Mitochondrial/genetics , Electron Transport Complex IV/genetics , Opisthorchiasis/parasitology , Opisthorchiasis/veterinary , Opisthorchidae/genetics , Opisthorchidae/isolation & purification , Opisthorchis/genetics , Opisthorchis/isolation & purification , Sensitivity and Specificity , Trematode Infections/parasitology , Trematode Infections/veterinary
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