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1.
Medicine (Baltimore) ; 101(2): e28541, 2022 Jan 14.
Article in English | MEDLINE | ID: mdl-35029210

ABSTRACT

INTRODUCTION: Pantoea dispersa belongs to the genus Pantoea, which is isolated from Enterobacteriaceae. It has been reported to cause some kinds of infections, but there are few detailed studies on it, especially its characteristics and identification methods, which has caused a lot of trouble in clinical work. PATIENT CONCERNS: A 51-year-old Chinese man was admitted to our hospital with a 7-hour history of progressive abdominal pain. He was previously diagnosed with liver cirrhosis secondary to chronic hepatitis B infection and hepatocellular carcinoma. An emergency hepatic artery embolization for hemostasis was performed under local anesthesia. Forty-eight hours later, the patient presented sudden onset of high fever up to 39.0 °C and chill. DIAGNOSIS: Morphological and phenotypic profiles were performed for preliminary identification for P dispersa. The biochemical features were obtained by VITEK 2 Test Kit. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis and 16S ribosomal RNA sequencing were performed to accurately identify P dispersa. INTERVENTION: Antibiotic therapy of intravenous ceftazidime was started empirically. The antibiotic treatment was switched to intravenous cefepime at the same time because of suspected ceftazidime treatment failure and microbiological sensitivity. OUTCOMES: The patient remained afebrile, and the second blood culture results were negative. Chest X-ray was normal as well. In order to control the progression of the hepatic lesion, transarterial chemoembolization was performed under local anesthesia. After completion of 14 days of antibiotic treatment, the patient was discharged with no signs of recurrence. CONCLUSION: P dispersa, a gram-negative bacterium rod, were facultative anaerobic, which displayed yellow pigmentation, round, raised, smooth on culture plates. Conventional analysis was difficult to complete its identification. With biochemical tests, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis and 16S ribosomal RNA sequencing, P dispersa can be accurately identified. It will help physicians understand the related clinical manifestations and make timely and effective treatment for patients.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Carcinoma, Hepatocellular/drug therapy , Ceftazidime/therapeutic use , Liver Neoplasms/drug therapy , Pantoea/isolation & purification , Rupture, Spontaneous/drug therapy , Chemoembolization, Therapeutic , Humans , Male , Middle Aged , Pantoea/genetics , RNA, Ribosomal, 16S/genetics , Rupture, Spontaneous/microbiology , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
2.
J Microbiol Biotechnol ; 31(5): 696-704, 2021 May 28.
Article in English | MEDLINE | ID: mdl-33820887

ABSTRACT

Levan is an industrially important, functional biopolymer with considerable applications in the food and pharmaceutical fields owing to its safety and biocompatibility. Here, levan-type exopolysaccharide produced by Pantoea agglomerans ZMR7 was purified by cold ethanol precipitation and characterized using TLC, FTIR, 1H, and 13C NMR spectroscopy. The maximum production of levan (28.4 g/l) was achieved when sucrose and ammonium chloride were used as carbon and nitrogen sources, respectively, at 35°C and an initial pH of 8.0. Some biomedical applications of levan like antitumor, antiparasitic, and antioxidant activities were investigated in vitro. The results revealed the ability of levan at different concentrations to decrease the viability of rhabdomyosarcoma and breast cancer cells compared with untreated cancer cells. Levan appeared also to have high antiparasitic activity against the promastigote of Leishmania tropica. Furthermore, levan had strong DPPH radical scavenging (antioxidant) activity. These findings suggest that levan produced by P. agglomerans ZMR7 can serve as a natural biopolymer candidate for the pharmaceutical and medical fields.


Subject(s)
Fructans/metabolism , Pantoea/metabolism , Polysaccharides, Bacterial/metabolism , Antineoplastic Agents/chemistry , Antineoplastic Agents/metabolism , Antineoplastic Agents/pharmacology , Antioxidants/chemistry , Antioxidants/metabolism , Antiparasitic Agents/chemistry , Antiparasitic Agents/metabolism , Antiparasitic Agents/pharmacology , Cell Line, Tumor , Cell Proliferation/drug effects , Culture Media , Fructans/chemistry , Fructans/pharmacology , Humans , Leishmania tropica/drug effects , Pantoea/isolation & purification , Polysaccharides, Bacterial/chemistry , Polysaccharides, Bacterial/pharmacology
3.
Microbiology (Reading) ; 167(4)2021 04.
Article in English | MEDLINE | ID: mdl-33656438

ABSTRACT

The compound 17α-ethinylestradiol (EE2) is a synthetic oestrogen which is classified as a group 1 carcinogen by the World Health Organization. Together with other endocrine disruptor compounds, EE2 has been included in the surface water Watch List by the European Commission, since it causes severe adverse effects in ecosystems. Thus, it became a high priority to find or improve processes such as biodegradation of EE2 to completely remove this drug from the wastewater treatment plants (WWTPs). The present study aimed at the isolation of bacteria capable of degrading EE2 using environmental samples, namely a sludge from the Faro Northwest WWTP. Four isolates with ability to grow in the presence of 50 mg l-1 EE2 were obtained. The analysis of 16SrRNA gene sequences identified the isolated bacteria as Acinetobacter bouvetii, Acinetobacter kookii, Pantoea agglomerans and Shinella zoogloeoides. The results of biodegradation assays showed that Acinetobacter bouvetii, Acinetobacter kookii, Pantoea agglomerans and Shinella zoogloeoides were able to degrade 47±4 %, 55±3 %, 64±4% and 35±4 %, respectively of 13 mg l-1 EE2 after 168 h at 28 °C. To the best of our knowledge, these bacterial isolates were identified as EE2 degraders for the first time. In a preliminary experiment on the identification of metabolic products resulting from EE2 degradation products such as estrone (E1), γ-lactone compounds, 2-pentanedioic acid and 2-butenedioic acid an intermediate metabolite of the TCA cycle, were detected.


Subject(s)
Acinetobacter/metabolism , Estrogens/metabolism , Ethinyl Estradiol/metabolism , Pantoea/metabolism , Rhizobiaceae/metabolism , Sewage/microbiology , Water Pollutants, Chemical/metabolism , Acinetobacter/genetics , Acinetobacter/isolation & purification , Biodegradation, Environmental , Pantoea/genetics , Pantoea/isolation & purification , Rhizobiaceae/genetics , Rhizobiaceae/isolation & purification
4.
Rev. patol. respir ; 24(1): 23-25, ene.-mar. 2021. ilus, tab
Article in Spanish | IBECS | ID: ibc-202341

ABSTRACT

Pantoea agglomerans es un bacilo gramnegativo reportado principalmente en heridas penetrantes, infecciones neonatales o como contaminante. La infección relevante por esta bacteria es rara. Nuestra revisión de la literatura sugirió una asociación consistente entre la infección por Pantoea agglomerans en pacientes inmunodeprimidos y una neoplasia maligna previamente diagnosticada. Los autores describen un derrame pleural paraneumónico en el que el aislamiento de Pantoea agglomerans permitió el diagnóstico de novo de cáncer de pulmón


Pantoea agglomerans is a gram-negative rod reported mainly in penetrating wounds, neonatal infections or as a contaminant. Relevant infection by this bacterium is rare. Our review of available literature suggested a consistent association between Pantoea agglomerans infection in immunocompromised patients and previously diagnosed malignancy. The authors describe a parapneumonic pleural effusion in which the isolation of Pantoea agglomerans allowed for de novo diagnosis of lung cancer


Subject(s)
Humans , Male , Aged , Lung Neoplasms/microbiology , Adenocarcinoma/microbiology , Immunocompetence , Adenocarcinoma/immunology , Lung Neoplasms/immunology , Pantoea/isolation & purification , Lung Neoplasms/pathology , Adenocarcinoma/pathology , Pleural Effusion/microbiology , Pleural Effusion/pathology , Fatal Outcome , Biomarkers, Tumor/isolation & purification
5.
Nat Prod Res ; 35(5): 796-801, 2021 Mar.
Article in English | MEDLINE | ID: mdl-30966796

ABSTRACT

Five indole derivatives, 1H-indol-7-ol (1), tryptophol (2), 3-indolepropionic acid (3), tryptophan (4), 3,3-di(1H-indol-3-yl)propane-1,2-diol (5) and two diketopiperazines, cyclo(L-Pro-L-Tyr) (6), cyclo[L-(4-hydroxyprolinyl)-L-leucine (7) along with one dihydrocinnamic acid (8) were isolated from Pantoea ananatis VERA8, that endophytic bacteria derived from Baccharoides anthelmintica roots. This is a first report towards an isolation of endophytic strains (funji or bacteria) from the B. anthelmintica herb. The synergetic properties of the total extract compositions, as well as effects of the pure isolated secondary metabolites evaluated on their melanin synthesis in murine B16 cells towards for vitiligo treatment.


Subject(s)
Asteraceae/microbiology , Endophytes/metabolism , Melanins/biosynthesis , Melanoma, Experimental/pathology , Pantoea/metabolism , Plant Roots/microbiology , Secondary Metabolism , Animals , Cell Line, Tumor , Endophytes/isolation & purification , Mice , Pantoea/isolation & purification , Phytochemicals/isolation & purification , Phytochemicals/pharmacology
6.
Environ Microbiol ; 23(1): 36-50, 2021 01.
Article in English | MEDLINE | ID: mdl-32686279

ABSTRACT

Phytophagous stink bugs typically harbor nutritional symbiotic bacteria in their midgut, to integrate their unbalanced diet. In the Pentatomidae, most symbionts are affiliated to the genus Pantoea, and are polyphyletic. This suggests a scenario of an ancestral establishment of symbiosis, followed by multiple symbiont replacement events by akin environmental bacteria in different host lineages. In this study, a novel Pantoeaspecies ('CandidatusPantoea persica') was characterized from the gut of the pentatomid Acrosternum arabicum, and shown to be highly abundant in a specific portion of the gut and necessary for the host development. The genome of the symbiont (2.9 Mb), while presenting putative host-supportive metabolic pathways, including those for amino acids and vitamin synthesis, showed a high level of pseudogenization, indicating ongoing genome reduction. Comparative analyses with other free-living and symbiotic Pantoea highlighted a convergent pattern of genome reduction in symbionts of pentatomids, putatively following the typical phases modelized in obligate nutritional symbionts of insects. Additionally, this system has distinctive traits, as hosts are closely related, and symbionts originated multiple independent times from closely related free-living bacteria, displaying convergent and independent conspicuous genome reduction. Due to such peculiarities, this may become an ideal model to study genome evolutionary processes in insect symbionts.


Subject(s)
Genome, Bacterial , Heteroptera/microbiology , Pantoea/genetics , Symbiosis , Animals , Evolution, Molecular , Heteroptera/physiology , Metabolic Networks and Pathways , Pantoea/classification , Pantoea/isolation & purification , Pantoea/physiology , Phylogeny
7.
J Appl Microbiol ; 131(1): 281-287, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33320407

ABSTRACT

AIMS: Isolation, characterization and identification of possible microbial contaminant(s) in the inflated foil bag containing hop pellets packed and stored in a modified atmosphere. METHODS AND RESULTS: Package gas of the inflated foil bag containing hop pellets was analysed by gas chromatography. Compared with the reference modified atmosphere, containing about 16 vol.% of CO2 , the inflated bag atmosphere contained 53 vol.% CO2 , suggesting possible microbial contamination. Therefore, several standard and mineral media, with added hop pellets or hop infusion, were used for cultivation at different temperatures under an anaerobic atmosphere. Cultivation in mineral medium with hop pellets yielded a bacterial isolate that was identified by MALDI-TOF mass spectrometry and verified by partial 16S rRNA gene analysis as Pantoea agglomerans, a known plant epiphyte. CONCLUSIONS: A novel strain of P. agglomerans (designed as DBM 3696) was found to be suspicious of causing inflation of the foil bag containing dried hop pellets packed in modified atmosphere. SIGNIFICANCE AND IMPACT OF THE STUDY: This study suggests that P. agglomerans, probably hop epiphyte, could cause sporadic inflation of bags with hop pellets packed in modified atmosphere causing logistical problems during bags transport.


Subject(s)
Food Packaging , Food Storage , Humulus/microbiology , Pantoea/isolation & purification , Atmosphere , Mass Spectrometry , RNA, Ribosomal, 16S
9.
Microbiol Res ; 237: 126479, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32416447

ABSTRACT

The prevalence of antibiotic-resistant Gram-positive and Gram-negative pathogens has prompted considerable efforts to identify new antibacterials. Here we show that Pantoea agglomerans Tx10-an isolate from the sputum sample of a cystic fibrosis patient-is a strong competitor that inhibits the growth of a wide range of Gram-positive and Gram-negative bacteria through the production of a secreted compound. A genetic screen to identify the genes involved in the production of this compound resulted in the delineation of a 6-gene biosynthetic cluster. We called this compound Pantoea Natural Product 2 (PNP-2). Assays with mutants deficient in PNP-2 production revealed they were still able to inhibit Erwinia amylovora, suggesting the production of a second antibiotic, which we identified as Pantocin A. We generated Pantocin A knockouts, and a PNP-2/Pantocin A double knockout and used these to evaluate the spectrum of activity of both natural products. We show that strains of Enterobacter, E. coli, Klebsiella, Kosakonia, Pseudocitrobacter, Salmonella, Staphylococcus, and Streptococcus as well as the majority of Pantoea strains assayed are susceptible to PNP-2, indicating a broad spectrum of activity, and potential for therapeutic development.


Subject(s)
Anti-Bacterial Agents , Bacteria/drug effects , Glycopeptides , Pantoea/metabolism , Anti-Bacterial Agents/biosynthesis , Anti-Bacterial Agents/pharmacology , Biological Products/pharmacology , Cystic Fibrosis/microbiology , Genes, Bacterial , Glycopeptides/biosynthesis , Glycopeptides/pharmacology , Multigene Family , Pantoea/genetics , Pantoea/isolation & purification
10.
Curr Microbiol ; 77(8): 1864-1870, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32242244

ABSTRACT

Stain NN08200 was isolated from the surface-sterilized stem of sugarcane grown in Guangxi province of China. The stain was Gram-negative, facultative anaerobic, non-spore-forming bacteria. The complete genome SNP-based phylogenetic analysis indicate that NN08200 is a member of the genus Pantoea ananatis. Here, we summarize the features of strain NN08200 and describe its complete genome. The genome contains a chromosome and two plasmids, in total 5,176,640 nucleotides with 54.76% GC content. The chromosome genome contains 4598 protein-coding genes, and 135 ncRNA genes, including 22 rRNA genes, 78 tRNA genes and 35 sRNA genes, the plasmid 1 contains 149 protein-coding genes and the plasmid 2 contains 308 protein-coding genes. We identified 130 tandem repeats, 101 transposon genes, and 16 predicted genomic islands on the chromosome. We found an indole pyruvate decarboxylase encoding gene which involved in the biosynthesis of the plant hormone indole-3-acetic acid, it may explain the reason why NN08200 stain have growth-promoting effects on sugarcane. Considering the pathogenic potential and its versatility of the species of the genus Pantoea, the genome information of the strain NN08200 give us a chance to determine the genetic background of interactions between endophytic enterobacteria and plants.


Subject(s)
Endophytes/genetics , Genome, Bacterial , Pantoea/genetics , Saccharum/microbiology , Base Composition , China , Endophytes/isolation & purification , Genomic Islands , Pantoea/isolation & purification , Phylogeny , Plasmids/genetics , Whole Genome Sequencing
11.
Curr Microbiol ; 77(8): 1525-1531, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32240342

ABSTRACT

As an important insect vector, Asian citrus psyllid (ACP), Diaphorina citri Kuwayama (Hemiptera: Liviidae) transmits the pathogen 'Candidatus Liberibacter asiaticus' (CLas) that is associated with citrus greening also known as Huanglongbing (HLB) disease. The bacterial endosymbionts have a potential role in shaping the host range of insect herbivores and their performance on different host plants, which might affect the endosymbiont distribution in insect populations. Here, we detected and characterized Pantoea endosymbiont in nymph and adult ACP specimens collected from Citrus reticulata Blanco and Cordia myxa L. plants. The phylogenetic tree constructed using endosymbiotic bacteria 16S ribosomal RNA sequences indicated that Pantoea sp. was closely related to Mixta calida, sharing about 98% identity and was grouped with other Mixta and Pantoea endosymbionts. Our findings showed 100% and 92.3% infection of Pantoea in adults while 61.5% and 90% infection of Pantoea in nymphs collected from C. reticulata and C. myxa plants, respectively. Understanding the interaction of endosymbiotic bacteria with ACP associated with host plants could be useful for developing an effective management strategy for both ACP and HLB disease.


Subject(s)
Citrus/microbiology , Hemiptera/microbiology , Insect Vectors/microbiology , Pantoea/classification , Phylogeny , Animals , Bacterial Typing Techniques , DNA, Bacterial/genetics , Nymph/microbiology , Pantoea/isolation & purification , Plant Diseases/microbiology , Plant Diseases/prevention & control , Prevalence , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Symbiosis
12.
Microbiologyopen ; 9(5): e1019, 2020 05.
Article in English | MEDLINE | ID: mdl-32113194

ABSTRACT

Microbially derived surfactants, so-called biosurfactants, have attracted significant attention as an environmentally friendly alternative to their chemically synthesized counterparts. Particularly, rhamnolipids offer a large potential with their outstanding surfactant properties such as complete biodegradability, low toxicity, and stability. Rhamnolipids are naturally synthesized by the opportunistic human pathogen Pseudomonas aeruginosa under the tight regulation of a highly complex quorum-sensing system. The heterologous production of mono-rhamnolipids by a newly isolated nonpathogenic strain of the genus Pantoea was investigated. Analysis of the genome obtained by a chimeric assembly of Nanopore long reads and high-quality Illumina reads suggested that the strain has evolved to an epiphytic rather than a pathogenic lifestyle. Functional heterologous expression of the mono-rhamnolipid operon rhlAB derived from a P. aeruginosa strain was established and confirmed by HPLC analysis. Transcriptome analysis indicated destabilizing effects of the produced rhamnolipids on the cell envelope of the host resulting in the induction of molecular stress responses. After integration of the rmlBCDA operon, extracellular rhamnolipids in amounts up to 0.4 g/L could be detected and were identified as a mono-rhamnolipid Rha-C10 -C10 by MALDI-TOF mass spectrometry.


Subject(s)
Decanoates/metabolism , Glycolipids/biosynthesis , Pantoea/genetics , Pantoea/metabolism , Pseudomonas aeruginosa/genetics , Rhamnose/analogs & derivatives , Drug Resistance, Multiple, Bacterial/genetics , Gene Expression Profiling , Genes, Bacterial , Mass Spectrometry , Metabolic Engineering , Operon , Pantoea/isolation & purification , Plasmids , Rhamnose/metabolism , Surface-Active Agents/metabolism
13.
World J Microbiol Biotechnol ; 36(2): 27, 2020 Jan 29.
Article in English | MEDLINE | ID: mdl-31997003

ABSTRACT

A phosphate solubilizing bacterium ZB was isolated from the rhizosphere soil of Araucaria, which falls into the species Pantoea agglomerans. Optimization for phosphate solubilization by strain ZB was performed. At optimum culture conditions, the isolate showed great ability of solubilizing different insoluble inorganic phosphate sources viz. Ca3(PO4)2 (TCP), Hydroxyapatite (HP), CaHPO4, AlPO4, FePO4 along with rock phosphates (RPs). Inoculation with planktonic cells was found to enhance dissolved phosphorous as compared to that achieved by symplasma inoculation. Besides inoculation with different status of cells, pre-incubation could also exert a great effect on phosphate solubilization ability of P. agglomerans. When isolate ZB was cultured with glucose as carbon sources, phosphorous was more efficiently dissolved from HP and RP without pre-incubation in comparison to that obtained with pre-cultivation. Pre-cultivation, however, was more suitable for P solubilization than no pre-cultivation when bacteria were grown with xylose. A positive correlation was detected between the production of organic acids and phosphate solubilization. P. agglomerans ZB possessed many plant growth promotion traits such as N2 fixation and production of indole 3-acetic acid, phytase, alkaline phosphatase. Pot experiment showed inoculation with single isolate ZB or biofertilizer prepared from semi-solid fermentation of isolate ZB with spent mushroom substrate (SMS) compost could enhance plant growth with respect to number of leaves, plant leave area, stem diameter, root length, root dry mass, shoot dry mass and biomass when compared to the abiotic control, revealing strain ZB could be a promising environmental-friendly biofertilizer to apply for agricultural field.


Subject(s)
Araucaria/microbiology , Pantoea/isolation & purification , Phosphates/chemistry , Carbon/chemistry , Fermentation , Glucose/chemistry , Nitrogen Fixation , Pantoea/metabolism , Rhizosphere , Soil Microbiology , Solubility
14.
Ocul Immunol Inflamm ; 28(3): 479-482, 2020 Apr 02.
Article in English | MEDLINE | ID: mdl-30811268

ABSTRACT

Purpose: The aim of this study was to report endophthalmitis caused by pantoe agglomerans after phacoemulsification surgery for the first time in English literature.Material-method: A 44-year-old male patient was referred to Yeniyuzyil University Gaziosmanpasa Hospital because of sudden painful vision loss in his right eye.Result: Pantoea agglomerans was identified in the culture of humor from the anterior chamber and vitreous. Based on the antibiotic susceptibility test, P.Agglomerans species culture was sensitive to ciprofloxacin.Conclusion: This is the first reported case of endophthalmitis after cataract surgery.


Subject(s)
Anterior Chamber/diagnostic imaging , Endophthalmitis/diagnosis , Enterobacteriaceae Infections/diagnosis , Eye Infections, Bacterial/diagnosis , Pantoea/isolation & purification , Phacoemulsification/adverse effects , Surgical Wound Infection/diagnosis , Adult , Anterior Chamber/microbiology , Endophthalmitis/microbiology , Enterobacteriaceae Infections/microbiology , Eye Infections, Bacterial/microbiology , Humans , Male , Surgical Wound Infection/microbiology
15.
Ann Agric Environ Med ; 26(4): 644-655, 2019 Dec 19.
Article in English | MEDLINE | ID: mdl-31885240

ABSTRACT

CASE DESCRIPTION: Five workers (2 males and 3 females) employed in a furniture factory located in eastern Poland developed hypersensitivity pneumonitis (HP) after the pine wood used for furniture production was replaced by birch wood. All of them reported onset of respiratory and general symptoms (cough, shortness of breath, general malaise) after inhalation exposure to birch dust, showed crackles at auscultation, ground-glass attenuations in HRCT examination, and lymphocytosis in the BAL examination. The diagnosis of acute HP was set in 4 persons and the diagnosis of subacute HP in one. IDENTIFICATION OF SPECIFIC ALLERGEN: Samples of birch wood associated with evoking disease symptoms were subjected to microbiological analysis with the conventional and molecular methods. Two bacterial isolates were found to occur in large quantities (of the order 108 CFU/g) in examined samples: Gram-negative bacterium of the species Pantoea agglomerans and a non-filamentous Gram-positive actinobacterium of the species Microbacterium barkeri. In the test for inhibition of leukocyte migration, 4 out of 5 examined patients showed a positive reaction in the presence of P. agglomerans and 2 in the presence of M. barkeri. Only one person showed the presence of precipitins to P. agglomerans and none to M. barkeri. In the inhalation challenge, which is the most relevant allergological test in the HP diagnostics, all patients reacted positively to P. agglomerans and only one to M. barkeri. The results indicate that P. agglomerans developing in birch wood was the main agent causing HP in the workers exposed to the inhalation of dust from this wood, while the etiologic role of M. barkeri is probably secondary. CONCLUSION: The results demonstrate that apart from fungi and filamentous actinobacteria, regarded until recently as causative agents of HP in woodworkers, Gram-negative bacteria and non-filamentous actinobacteria may also elicit disease symptoms in the workers processing wood infected with large amounts of these microorganisms. The results obtained also seem to indicate that cellular-mediated reactions are more significant for causing disease symptoms compared to those that are precipitin-mediated.


Subject(s)
Actinobacteria/isolation & purification , Air Pollutants, Occupational/adverse effects , Alveolitis, Extrinsic Allergic/microbiology , Betula/microbiology , Dust/analysis , Inhalation Exposure/adverse effects , Pantoea/isolation & purification , Actinobacteria/genetics , Actinobacteria/physiology , Acute Disease , Adult , Air Pollutants, Occupational/analysis , Alveolitis, Extrinsic Allergic/etiology , Female , Humans , Inhalation Exposure/analysis , Male , Microbacterium , Middle Aged , Pantoea/genetics , Pantoea/physiology , Poland , Wood/microbiology
16.
Pediatr. aten. prim ; 21(84): e201-e203, oct.-dic. 2019. ilus
Article in Spanish | IBECS | ID: ibc-191978

ABSTRACT

La infección por Pantoea agglomerans es muy rara de forma global y particularmente en Pediatría. La mayoría de las infecciones que causa son nosocomiales en pacientes inmunodeprimidos. Se han descrito infecciones articulares tras punción con espinas vegetales dando lugar a artritis, sinovitis u osteítis; meningitis o septicemia neonatal tras la contaminación de la nutrición parenteral o transfusiones de hematíes; infecciones de orina o respiratorias y peritonitis. En inmunocompetentes las infecciones son excepcionales, por lo que se aconseja realizar estudio de inmunidad, como en nuestro caso. El germen es muy resistente a antibióticos betalactámicos y para erradicarlo suele ser necesario tratar según antibiograma


Pantoea agglomerans infections are very rare globally and particularly in Pediatrics. Most of them are nosocomial and affect immnunosuppresed patients. Articular infections have been described after puncture with plant thorns giving rise to arthritis, synovitis or osteitis; they also can cause meningitis or neonatal septicemia after contamination of parenteral nutrition or red blood cell transfusions; urinary or respiratory infections, and peritonitis. In immunocompetent patients the infections are exceptional, so it is advisable to perform an immunity study, as in our case. The germ is very resistant to beta-lactam antibiotics and to eradicate it, it is usually necessary to treat according to antibiogram


Subject(s)
Humans , Female , Child , Urinary Tract Infections/microbiology , Pantoea/isolation & purification , Enterobacteriaceae Infections/diagnosis , Immunocompromised Host/immunology , Pantoea/pathogenicity , Dysuria/etiology
17.
PLoS One ; 14(11): e0224731, 2019.
Article in English | MEDLINE | ID: mdl-31682625

ABSTRACT

The Enterobacterial genus Pantoea contains both free-living and host-associating species, with considerable debate as to whether documented reports of human infections by members of this species group are accurate. MALDI-TOF-based identification methods are commonly used in clinical laboratories as a rapid means of identification, but its reliability for identification of Pantoea species is unclear. In this study, we carried out cpn60-based molecular typing of 54 clinical isolates that had been identified as Pantoea using MALDI-TOF and other clinical typing methods. We found that 24% had been misidentified, and were actually strains of Citrobacter, Enterobacter, Kosakonia, Klebsiella, Pseudocitrobacter, members of the newly described Erwinia gerundensis, and even several unclassified members of the Enterobacteriaceae. The 40 clinical strains that were confirmed to be Pantoea were identified as Pantoea agglomerans, Pantoea allii, Pantoea dispersa, Pantoea eucalypti, and Pantoea septica as well as the proposed species group, Pantoea latae. Some species groups considered largely environmental or plant-associated, such as P. allii and P. eucalypti were also among clinical specimens. Our results indicate that MALDI-TOF-based identification methods may misidentify strains of the Enterobacteriaceae as Pantoea.


Subject(s)
Bacterial Typing Techniques/methods , Enterobacteriaceae Infections/microbiology , Pantoea/classification , Diagnostic Errors , Enterobacteriaceae Infections/diagnosis , Humans , Pantoea/genetics , Pantoea/isolation & purification , Phylogeny , Plants/microbiology , Reproducibility of Results , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
18.
World J Microbiol Biotechnol ; 35(8): 126, 2019 Jul 30.
Article in English | MEDLINE | ID: mdl-31363938

ABSTRACT

Isolation and identification of temperature tolerant phosphate solubilizing bacteria (TTPSB) and their use as microbial fertilizers was the main goal of the study. In this study, TTPSB were isolated from soil samples treated for 16 h at 55 °C. Their phosphate solubilizing activity was either evaluated in solid media by forming a clear zone (halo) or in liquid media by quantification of the soluble phosphate in the growth medium. Five colonies (RPS4, RPS6, RPS7, RPS8 and RPS9) were identified to be able to form a halo and two of the isolates (RPS9 and RPS7) tolerated a temperature of 55 °C. With tricalcium phosphate (TCP) as the sole P-source, the phosphate solubilizing capacity of RPS9 and RPS7 was determined to be 563.8 and 324.1 mg P L-1 in liquid Sperber medium, respectively. Both bacterial isolates were identified as Pantoea agglomerans by molecular and biochemical characterization. To be used as a microbial fertilizer a carrier system for the temperature tolerant bacteria consisting of rock phosphate, sulfur and bagasse was used. It could be established that the bacterial cell counts of the microbial fertilizers were acceptable for application after storage for 4 months at 28 °C. In a greenhouse experiment using pot cultures, inoculation of maize (S.C.704) with the microbial fertilizers in an autoclaved soil resulted in a significant effect on total fresh and dry weight of the plant root and shoot as well as on the P content of the root and shoot. The effects observed with RPS9 as a component of the microbial fertilizer on plant growth and P nutrition was comparable with the addition of 50% of recommended triple superphosphate (TSP) dose. Using temperature tolerant bacteria in microbial fertilizers will overcome limitations in production and storage of the microbial fertilizers and contribute to a environmentally-friendly agriculture. The temperature tolerant P. agglomerans strain RPS9 was shown to be effective as part of a microbial fertilizer in supporting the growth and P uptake in maize.


Subject(s)
Agriculture/methods , Calcium Phosphates/metabolism , Pantoea/isolation & purification , Pantoea/metabolism , Soil Microbiology , Zea mays/growth & development , Bacteriological Techniques , Biotransformation , Calcium Phosphates/chemistry , Culture Media/chemistry , Hot Temperature , Pantoea/classification , Pantoea/radiation effects , Solubility , Zea mays/microbiology
20.
Microbes Environ ; 34(2): 136-145, 2019 Jun 27.
Article in English | MEDLINE | ID: mdl-30918162

ABSTRACT

Although Pantoea species are widely distributed among plants, water, soils, humans, and animals, due to a lack of efficient isolation methods, the clonality of Pantoea species is poorly characterized. Therefore, we developed a new semi-selective medium designated 'lysine-ornithine-mannitol-arginine-charcoal' (LOMAC) to isolate these species. In an inclusive and exclusive study examining 94 bacterial strains, all Pantoea strains exhibited yellow colonies on LOMAC medium. The performance of the medium was assessed using Pantoea-spiked soils. Percent average agreement relative to the Api20E biochemical test was 97%. A total of 24 soil spot samples and 19 plant types were subjected to practical trials. Of the 91 yellow colonies selected on LOMAC medium, 81 were correctly identified as Pantoea species using the biochemical test. The sequencing of 16S rRNA (rrs) and gyrB from these isolates confirmed that Pantoea agglomerans, P. vagans, P. ananatis, and P. deleyi were present in Japanese fields. A phylogenetic analysis using rrs enabled only the limited separation of strains within each Pantoea spp., whereas an analysis using gyrB revealed higher variability and enabled the finer resolution of distinct branches. P. agglomerans isolates were divided into 3 groups, 2 of which were new clades, with the other comprising a large group including biocontrol strains. P. vagans was also in one of the new clades. The present results indicate that LOMAC medium is useful for screening Pantoea species. The use of LOMAC medium will provide new opportunities for identifying the beneficial properties of Japanese Pantoea isolates.


Subject(s)
Amino Acids, Basic , Charcoal , Culture Media , Environmental Microbiology , Mannitol , Pantoea/isolation & purification , Culture Media/chemistry , DNA, Bacterial/genetics , Genes, Bacterial/genetics , Japan , Pantoea/classification , Pantoea/growth & development , Phylogeny , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA
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