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1.
ChemMedChem ; 16(23): 3588-3599, 2021 12 06.
Article in English | MEDLINE | ID: mdl-34519427

ABSTRACT

Three analogues of To042, a tocainide-related lead compound recently reported for the treatment of myotonia, were synthesized and evaluated in vitro as skeletal muscle sodium channel blockers possibly endowed with enhanced use-dependent behavior. Patch-clamp experiments on hNav1.4 expressed in HEK293 cells showed that N-[(naphthalen-1-yl)methyl]-4-[(2,6-dimethyl)phenoxy]butan-2-amine, the aryloxyalkyl bioisostere of To042, exerted a higher use-dependent block than To042 thus being able to preferentially block the channels in over-excited membranes while preserving healthy tissue function. It also showed the lowest active transport across BBB according to the results of P-glycoprotein (P-gp) interacting activity evaluation and the highest cytoprotective effect on HeLa cells. Quantum mechanical calculations and dockings gave insights on the most probable conformation of the aryloxyalkyl bioisostere of To042 in solution and the target residues involved in the binding, respectively. Both approaches indicated the conformations that might be adopted in both the unbound and bound state of the ligand. Overall, N-[(naphthalen-1-yl)methyl]-4-[(2,6-dimethyl)phenoxy]butan-2-amine exhibits an interesting toxico-pharmacological profile and deserves further investigation.


Subject(s)
Butylamines/pharmacology , NAV1.4 Voltage-Gated Sodium Channel/metabolism , Phenyl Ethers/pharmacology , Voltage-Gated Sodium Channel Blockers/pharmacology , Antioxidants/chemical synthesis , Antioxidants/metabolism , Antioxidants/pharmacology , Antioxidants/toxicity , Butylamines/chemical synthesis , Butylamines/metabolism , Butylamines/toxicity , HEK293 Cells , HeLa Cells , Humans , Mexiletine/pharmacology , Molecular Docking Simulation , Phenyl Ethers/chemical synthesis , Phenyl Ethers/metabolism , Phenyl Ethers/toxicity , Protein Binding , Reactive Oxygen Species/metabolism , Voltage-Gated Sodium Channel Blockers/chemical synthesis , Voltage-Gated Sodium Channel Blockers/metabolism , Voltage-Gated Sodium Channel Blockers/toxicity
2.
J Med Chem ; 64(12): 8287-8302, 2021 06 24.
Article in English | MEDLINE | ID: mdl-34081480

ABSTRACT

Recycling of all-trans-retinal to 11-cis-retinal through the visual cycle is a fundamental metabolic pathway in the eye. A potent retinoid isomerase (RPE65) inhibitor, (R)-emixustat, has been developed and tested in several clinical trials; however, it has not received regulatory approval for use in any specific retinopathy. Rapid clearance of this drug presents challenges to maintaining concentrations in eyes within a therapeutic window. To address this pharmacokinetic inadequacy, we rationally designed and synthesized a series of emixustat derivatives with strategically placed fluorine and deuterium atoms to slow down the key metabolic transformations known for emixustat. Crystal structures and quantum chemical analysis of RPE65 in complex with the most potent emixustat derivatives revealed the structural and electronic bases for how fluoro substituents can be favorably accommodated within the active site pocket of RPE65. We found a close (∼3.0 Å) F-π interaction that is predicted to contribute ∼2.4 kcal/mol to the overall binding energy.


Subject(s)
Eye/metabolism , Phenyl Ethers/pharmacokinetics , Propanolamines/pharmacokinetics , Amine Oxidase (Copper-Containing)/metabolism , Animals , Cattle , Cell Adhesion Molecules/metabolism , Crystallography, X-Ray , Deuterium/chemistry , Drug Design , Fluorine/chemistry , Halogenation , Mice , Molecular Structure , Phenyl Ethers/chemical synthesis , Phenyl Ethers/metabolism , Propanolamines/chemical synthesis , Propanolamines/metabolism , Protein Binding , Structure-Activity Relationship , cis-trans-Isomerases/metabolism
3.
Int J Mol Sci ; 21(16)2020 Aug 12.
Article in English | MEDLINE | ID: mdl-32806611

ABSTRACT

Ion-exchange membranes are the core elements for an electrodialysis (ED) separation process. Phase inversion is an effective method, particularly for commercial membrane production. It introduces two different mechanisms, i.e., thermal induced phase separation (TIPS) and diffusion induced phase separation (DIPS). In this study, anion exchange membranes (AEMs) were prepared by grafting a quaternized moiety (QM,2-[dimethylaminomethyl]naphthalen-1-ol) through brominated poly (2,6-dimethyl-1,4-phenylene oxide) (BPPO) via the TIPS method. Those membranes were applied for selective bisulfite (HSO3-) anion separation using ED. The membrane surface morphology was characterized by SEM, and the compositions were magnified using a high-resolution transmission electron microscope (HRTEM). Notably, the membranes showed excellent substance stability in an alkali medium and in grafting tests performed in a QM-soluble solvent. The ED experiment indicated that the as-prepared membrane exhibited better HSO3- separation performance than the state-of-the-art commercial Neosepta AMX (ASTOM, Japan) membrane.


Subject(s)
Membranes, Artificial , Phase Transition , Phenyl Ethers/chemistry , Polymers/chemistry , Sulfites/chemistry , Temperature , Anions , Electric Conductivity , Ion Exchange , Models, Molecular , Phenyl Ethers/chemical synthesis , Polymers/chemical synthesis , Proton Magnetic Resonance Spectroscopy , Spectroscopy, Fourier Transform Infrared
4.
Bioorg Med Chem Lett ; 30(18): 127421, 2020 09 15.
Article in English | MEDLINE | ID: mdl-32717613

ABSTRACT

The discovery of how a photon is converted into a chemical signal is one of the most important achievements in the field of vision. A key molecule in this process is the visual chromophore retinal. Several eye diseases are attributed to the abnormal metabolism of retinal in the retina and the retinal pigment epithelium. Also, the accumulation of two toxic retinal derivatives, N-retinylidene-N-retinylethanolamine and the retinal dimer, can damage the retina leading to blindness. RPE65 (Retinal pigment epithelium-specific 65 kDa protein) is one of the central enzymes that regulates the metabolism of retinal and the formation of its toxic metabolites. Its inhibition might decrease the rate of the retina's degeneration by limiting the amount of retinal and its toxic byproducts. Two RPE65 inhibitors, (R)-emixustat and (R)-MB001, were recently developed for this purpose.


Subject(s)
Enzyme Inhibitors/chemical synthesis , Phenyl Ethers/chemical synthesis , Propanolamines/chemical synthesis , Retinal Degeneration/drug therapy , cis-trans-Isomerases/antagonists & inhibitors , Alkanes/chemistry , Enzyme Inhibitors/pharmacology , Halogenation , Humans , Isomerism , Models, Molecular , Molecular Conformation , Pharmaceutical Preparations/chemical synthesis , Phenyl Ethers/pharmacology , Propanolamines/pharmacology , Retina/metabolism , Retinaldehyde/analogs & derivatives , Retinaldehyde/metabolism , Structure-Activity Relationship
5.
Chemistry ; 26(44): 9846-9850, 2020 Aug 06.
Article in English | MEDLINE | ID: mdl-32510795

ABSTRACT

Diorcinols and related prenylated diaryl ethers were reported to exhibit activity against methicillin-resistant clinical isolates of Staphylococcus aureus (MRSA). Within these lines, we report the first total synthesis of diorcinol D, I, J, the proposed structure of verticilatin and recently isolated antibacterial diaryl ether by using an efficient and highly divergent synthetic strategy. These total syntheses furnish the diaryl ethers in only five to seven steps employing a Pd-catalyzed diaryl ether coupling as the key step. The total synthesis led to the structural revision of the natural product verticilatin, which has been isolated from a plant pathogenic fungus. Furthermore, these structures were tested in order to determine their antibacterial activities against different MRSA strains as well as further Gram-positive and -negative bacteria.


Subject(s)
Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/pharmacology , Methicillin-Resistant Staphylococcus aureus/drug effects , Phenols/chemical synthesis , Phenols/pharmacology , Phenyl Ethers/chemical synthesis , Phenyl Ethers/pharmacology , Humans , Microbial Sensitivity Tests , Staphylococcal Infections/drug therapy , Staphylococcal Infections/microbiology
6.
Eur J Med Chem ; 199: 112377, 2020 Aug 01.
Article in English | MEDLINE | ID: mdl-32388281

ABSTRACT

Novel resorcinol diphenyl ether-based PROTACs (PROteolysis TArgeting Chimeras) were designed and evaluated for their inhibitory activity against the programmed cell death-1/programmed cell death-ligand 1 (PD-1/PD-L1) pathway and their ability to degrade PD-L1 protein. Most of the compounds displayed excellent inhibitory activities against PD-1/PD-L1, as assessed by the homogenous time-resolved fluorescence (HTRF) binding assay, with IC50 values ranging from 25 nM to 200 nM. Among them, compound P22 is one of the best with an IC50 value of 39.2 nM. In addition to inhibiting PD-1/PD-L1 interaction, P22 also significantly restored the immunity repressed in a co-culture model of Hep3B/OS-8/hPD-L1 and CD3 T cells. Furthermore, flow cytometry (FCM) and western-blot data demonstrated that P22 could moderately reduce the protein levels of PD-L1 in a lysosome-dependent manner, which may contribute to its immune effects. Preliminary FCM and western-blot data suggest that it is possible to build PD-L1-targeting PROTAC-like molecules based on PD-1/PD-L1 small molecule inhibitors, though these compounds showed only modest degradation efficiencies. Collectively, this work suggests that P22 may serve as a starting point for exploring the degradation of PD-L1 by PROTAC-like strategy.


Subject(s)
B7-H1 Antigen/antagonists & inhibitors , Drug Discovery , Immune Checkpoint Inhibitors/pharmacology , Phenyl Ethers/pharmacology , Proteolysis/drug effects , Resorcinols/pharmacology , B7-H1 Antigen/metabolism , Cell Proliferation/drug effects , Cells, Cultured , Coculture Techniques , Dose-Response Relationship, Drug , Humans , Immune Checkpoint Inhibitors/chemical synthesis , Immune Checkpoint Inhibitors/chemistry , Molecular Structure , Phenyl Ethers/chemical synthesis , Phenyl Ethers/chemistry , Resorcinols/chemical synthesis , Resorcinols/chemistry , Structure-Activity Relationship
7.
J Agric Food Chem ; 68(12): 3729-3741, 2020 Mar 25.
Article in English | MEDLINE | ID: mdl-32125836

ABSTRACT

To seek new protoporphyrinogen oxidase (PPO) inhibitors with better biological activity, a series of novel diphenyl ether derivatives containing tetrahydrophthalimide were designed based on the principle of substructure splicing and bioisomerization. PPO inhibition experiments exhibited that 6c is the most potential compound, with the half-maximal inhibitory concentration (IC50) value of 0.00667 mg/L, showing 7 times higher activity than Oxyfluorfen (IC50 = 0.0426 mg/L) against maize PPO and similar herbicidal activities to Oxyfluorfen in weeding experiments in greenhouses and field weeding experiments. In view of the inspected bioactivities, the structure-activity relationship (SAR) of this series of compounds was also discussed. Crop selection experiments demonstrate that compound 6c is safe for soybeans, maize, rice, peanuts, and cotton at a dose of 300 g ai/ha. Accumulation analysis experiments showed that the accumulation of 6c in some crops (soybeans, peanuts, and cotton) was significantly lower than Oxyfluorfen. Current work suggests that compound 6c may be developed as a new herbicide candidate in fields.


Subject(s)
Herbicides/chemistry , Herbicides/toxicity , Phenyl Ethers/chemistry , Phenyl Ethers/toxicity , Plant Weeds/drug effects , Captan/chemical synthesis , Captan/chemistry , Captan/toxicity , Crops, Agricultural/drug effects , Crops, Agricultural/physiology , Halogenated Diphenyl Ethers/toxicity , Herbicides/chemical synthesis , Molecular Docking Simulation , Phenyl Ethers/chemical synthesis , Phthalimides/chemical synthesis , Phthalimides/chemistry , Phthalimides/toxicity , Plant Weeds/enzymology , Plant Weeds/physiology , Protoporphyrinogen Oxidase/antagonists & inhibitors
8.
Mol Divers ; 24(4): 1265-1279, 2020 Nov.
Article in English | MEDLINE | ID: mdl-31506871

ABSTRACT

Diphenyl ether derivatives inhibit mycobacterial cell wall synthesis by inhibiting an enzyme, enoyl-acyl carrier protein reductase (InhA), which catalyses the last step in the fatty acid synthesis cycle of genus Mycobacterium. To select and validate a protein crystal structure of enoyl-acyl carrier protein reductase of Mycobacterium tuberculosis for designing inhibitors using molecular modelling, a cross-docking and correlation study was performed. A series of novel 1-(3-(3-hydroxy-4-phenoxyphenyl)-5-phenyl-4,5-dihydro-1H-pyrazol-1-yl) ethan-1-ones were synthesized from this model and screened for their antitubercular activity against M. tuberculosis H37Rv. Compound PYN-8 showed good antitubercular activity on M. tuberculosis H37Rv (MIC = 4-7 µM) and Mycobacterium bovis (% inhibition at 10 µM = 95.91%). Cytotoxicity of all the synthesized derivatives was assessed using various cell lines, and they were found to be safe. Structure of PYN-8 was also confirmed by single-crystal X-ray diffraction. The molecular modelling studies also corroborated the biological activity of the compounds. Further, in silico findings revealed that all these tested compounds exhibited good ADME properties and drug likeness and thus may be considered as potential candidates for further drug development.


Subject(s)
Antitubercular Agents/chemical synthesis , Antitubercular Agents/pharmacology , Phenyl Ethers/chemical synthesis , Phenyl Ethers/pharmacology , Tuberculosis/drug therapy , Bacterial Proteins/metabolism , Cell Line , Cell Line, Tumor , Computer Simulation , Crystallography, X-Ray , Drug Design , HEK293 Cells , HeLa Cells , Humans , MCF-7 Cells , Microbial Sensitivity Tests/methods , Molecular Docking Simulation , Mycobacterium tuberculosis/drug effects , PC-3 Cells , Structure-Activity Relationship , Tuberculosis/metabolism
9.
Med Chem ; 16(2): 256-270, 2020.
Article in English | MEDLINE | ID: mdl-30848207

ABSTRACT

BACKGROUND: The well-known antibacterial agent Triclosan (TCL) that targets bacterial enoylacyl protein reductase has been described to inhibit human fatty acid synthase (FASN) via the enoylacyl reductase domain. A Literature survey indicates that TCL is selectively toxic to cancer cells and furthermore might indeed reduce cancer incidence in vivo. A recent study found that TCL inhibits FASN by acting as an allosteric protein-protein interface (PPI) inhibitor. It induces dimer orientation changes that effect in a downstream reorientation of catalytic residues in the NADPH binding site proposing TCL as a viable scaffold to design a superior molecule that might have more inhibitory potential. This unveils tons of potential interaction space to take advantage of future inhibitor design. OBJECTIVES: Synthesis of TCL mimicking novel diphenyl ether derivatives, biological evaluation as potential antiproliferative agents and molecular docking and molecular dynamics simulation studies. METHODS: A series of novel N-(1-(3-hydroxy-4-phenoxyphenyl)-3-oxo-3-phenylpropyl)acetamides (3a-n) and N-(3(3-hydroxy-4phenoxyphenyl)-3-oxo-1-phenylpropyl) acetamides (6a-n) were designed, synthesized, characterized and evaluated against HepG2, A-549, MCF-7 and Vero cell lines. The induction of antiproliferative activity of selected compounds (3d and 6c) was done by AO/EB (acridine orange/ethidium bromide) nuclear staining method, DNA fragmentation study, and cell cycle analysis was performed by flow cytometry. Molecular docking and dynamics simulation study was also performed. RESULTS: Among the tested compounds, compound 3d was most active (IC50 13.76 ± 0.43 µM) against A-549 cell line. Compounds 3d and 3g were found to be moderately active with IC50 30.56 ± 1.1 µM and 25.05 ± 0.8 µM respectively against MCF-7 cell line. Morphological analysis of A-549 cells treated with 3d and 6c clearly demonstrated the reduction of cell viability and induction of apoptosis. DNA fragmentation was observed as a characteristic of apoptosis in treated cells. Further, cell cycle analysis by flow cytometry confirmed that compounds 3d and 6c significantly arrested the cell cycle at the G0/G1 phase. Molecular docking study demonstrated that these compounds exhibit high affinity for the human fatty acid synthase (hFASN) target. Molecular dynamics simulation study of the most active compound 3d was performed for calculating binding free energies using Molecular Mechanics-Generalized Born Surface Area (MM/GBSA). CONCLUSION: Compound 3d (IC50 13.76 ± 0.43 µM) has been identified as a potential lead molecule for anticancer activity against A-549 cells followed by 3l, 6c, and 3g. Thus, the design of diphenyl ether derivatives with enhanced affinity to the binding site of hER may lead to the discovery of potential anticancer agents.


Subject(s)
Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/pharmacology , Molecular Dynamics Simulation , Phenyl Ethers/chemical synthesis , Phenyl Ethers/pharmacology , Antineoplastic Agents/chemistry , Antineoplastic Agents/metabolism , Cell Line, Tumor , Chemistry Techniques, Synthetic , Fatty Acid Synthases/chemistry , Fatty Acid Synthases/metabolism , Humans , Molecular Docking Simulation , Phenyl Ethers/chemistry , Phenyl Ethers/metabolism , Protein Conformation
10.
Mol Divers ; 24(1): 119-130, 2020 Feb.
Article in English | MEDLINE | ID: mdl-30852722

ABSTRACT

Methyl and phenyl esters of 2',3'-PhABA and iso-2',3'-PhABA were prepared for the biological investigation and development of practical applications. These esters exhibited excellent activity in most plant growth inhibitory assays. And, three esters were more efficient than ABA in stomatal closure. The 2',3'-PhABA analogs and their methyl esters have good stability in hydrolysis assay, and the different lipid solubility and permeability of different esters may be one of the origins of their active selectivity for different plants and physiological processes. Furthermore, in the study of drought tolerance, all four esters had comparable activity to ABA. These results suggest that these esters were potent plant growth regulator (PGR) candidates for anti-drought. The finding that different esters have different selective bioactivity and biophysical properties indicates that these esters not only function as ABA-like PGRs but also have the possibility as potential selective pro-hormone. 2',3'-BenzoABA esters as PGR candidates with prolonged and selective bioactivity.


Subject(s)
Chemistry Techniques, Synthetic , Phenyl Ethers/chemical synthesis , Phenyl Ethers/pharmacology , Plant Growth Regulators/chemical synthesis , Plant Growth Regulators/pharmacology , Chromatography, High Pressure Liquid , Droughts , Hydrolysis , Molecular Structure , Phenotype , Plant Development/drug effects , Stress, Physiological
11.
Mini Rev Med Chem ; 19(17): 1392-1406, 2019.
Article in English | MEDLINE | ID: mdl-30864517

ABSTRACT

Diphenyl ethers (DPE) and its analogs have exhibited excellent potential for therapeutic and industrial applications. Since the 19th century, intensive research is perpetuating on the synthetic routes and biological properties of DPEs. Few well-known DPEs are Nimesulide, Fenclofenac, Triclosan, Sorafenib, MK-4965, and MK-1439 which have shown the potential of this moiety as a lead scaffold for different pharmacological properties. In this review, we recapitulate the diverse synthetic route of DPE moiety inclusive of merits and demerits over the classical synthetic route and how this moiety sparked an interest in researchers to discern the SAR (Structure Activity Relationship) for the development of diversified biological properties of DPEs such as antimicrobial, antifungal, antiinflammatory & antiviral activities.


Subject(s)
Anti-Bacterial Agents/pharmacology , Anti-Inflammatory Agents, Non-Steroidal/pharmacology , Antifungal Agents/pharmacology , Antiviral Agents/pharmacology , Phenyl Ethers/pharmacology , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/chemistry , Anti-Inflammatory Agents, Non-Steroidal/chemical synthesis , Anti-Inflammatory Agents, Non-Steroidal/chemistry , Antifungal Agents/chemical synthesis , Antifungal Agents/chemistry , Antiviral Agents/chemical synthesis , Antiviral Agents/chemistry , Humans , Molecular Structure , Phenyl Ethers/chemical synthesis , Phenyl Ethers/chemistry
12.
Eur J Med Chem ; 171: 195-208, 2019 Jun 01.
Article in English | MEDLINE | ID: mdl-30921759

ABSTRACT

Microtubule targeting agents represent a very active arena in the development of anticancer agents. In particular, compounds binding at the colchicine site in tubulin are being deeply studied, and the structural information recently available on this binding site allows structure-directed design of new ligands. Structural comparison of our recently reported high resolution X-Ray structure of the cyclohexanedione derivative TUB075 bound to tubulin and the tubulin-DAMA-colchicine complex has revealed a conformational change in the αT5 loop. By a grid-based computational analysis of the tubulin-DAMA-colchicine binding site, we have identified a new favourable binding area in the colchicine-site that was unexplored by our lead TUB075. Thus, based on a structure-guided design, new cyclohexanedione derivatives have been synthesized and tested for tubulin binding and in cellular assays. As a result, we have identified diphenyl ether derivatives with IC50 values around 10-40 nM against three different tumor cell lines and affinity constants for tubulin similar to that of colchicine around 107 M-1. As expected, they halted the cell cycle progression at G2/M phase at concentrations as low as 0.08 µM.


Subject(s)
Antineoplastic Agents/pharmacology , Colchicine/pharmacology , Cyclohexanones/pharmacology , Phenyl Ethers/pharmacology , Tubulin/metabolism , Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/chemistry , Binding Sites/drug effects , Cell Cycle/drug effects , Cell Line , Cell Proliferation/drug effects , Colchicine/chemistry , Crystallography, X-Ray , Cyclohexanones/chemistry , Dose-Response Relationship, Drug , Drug Screening Assays, Antitumor , Humans , Models, Molecular , Molecular Structure , Phenyl Ethers/chemical synthesis , Phenyl Ethers/chemistry , Structure-Activity Relationship
13.
Zhongguo Zhong Yao Za Zhi ; 43(17): 3582-3588, 2018 Sep.
Article in Chinese | MEDLINE | ID: mdl-30347929

ABSTRACT

To explore potent anticancer agent based on artemisinin scaffold, a series of 10-O-phenyl ethers derivatives containing dihydropyrazolyl or pyrazolyl moiety have been designed and synthesized. Their structures were determined by LC-MS and ¹H-NMR date. Inhibitory effects of the target compounds in human breast cancer MCF-7, MCF/Adr, MDA-MB-231 cells and prostate cell line PC-3 were determined by MTT assay. Those derivatives displayed good antiproliferative activity against the tested cancer cells. Particularly, target compounds exhibited significant cytotoxicity against drug-resistance cells MCF/Adr, which was worthy for further investigation.


Subject(s)
Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/pharmacology , Artemisinins/chemistry , Phenyl Ethers/chemical synthesis , Phenyl Ethers/pharmacology , Cell Line, Tumor , Cell Proliferation , Drug Design , Drug Screening Assays, Antitumor , Humans , Structure-Activity Relationship
14.
J Am Chem Soc ; 140(40): 12829-12835, 2018 10 10.
Article in English | MEDLINE | ID: mdl-30216713

ABSTRACT

Ethynylbenziodoxol(on)es (EBXs) have been widely used in organic synthesis as electrophilic alkyne-transfer reagents involving carbon- and heteroatom-based nucleophiles. However, potential reactions of EBXs with phenols remain uninvestigated. Here, we present the formation of ( Z)-2-iodovinyl phenyl ethers with excellent regio- and stereoselectivity through the reactivity between EBXs and phenols driven by visible light. We propose that this light-activated transformation proceeds through electron donor-acceptor complexes to enable new reactivity beyond existing mechanisms for alkynylation of carbon- and heteroatom-based nucleophiles. This operationally robust process was employed for the synthesis of diverse ( Z)-2-iodovinyl phenyl ethers through irradiating a solution containing a phenyl-EBX, a phenol, and the base Cs2CO3 with a commercially available blue LED at room temperature. The ( Z)-2-iodovinyl phenyl ether products can be further stereospecifically functionalized to form trisubstituted alkenes, demonstrating the potential of these products en route to chemical complexity.


Subject(s)
Iodobenzenes/chemistry , Phenols/chemistry , Phenyl Ethers/chemical synthesis , Vinyl Compounds/chemical synthesis , Chemistry Techniques, Synthetic , Halogenation , Iodobenzenes/chemical synthesis , Light , Models, Molecular , Phenols/chemical synthesis , Phenyl Ethers/chemistry , Vinyl Compounds/chemistry
15.
Bioorg Med Chem ; 26(17): 4817-4822, 2018 09 15.
Article in English | MEDLINE | ID: mdl-30166255

ABSTRACT

DAA1106 (N-(2,5-dimethoxybenzyl)-N-(5-fluoro-2-phenoxyphenyl)acetamide), is a potent and selective ligand for the translocator protein (18 kDa, TSPO) in brain mitochondrial fractions of rats and monkey (Ki = 0.043 and 0.188 nM, respectively). In this study, to translate [18F]DAA1106 for clinical studies, we performed automated syntheses of [18F]DAA1106 using the spirocyclic iodonium ylide (1) as a radiolabelling precursor and conducted preclinical studies including positron emission tomography (PET) imaging of TSPO in ischemic rat brains. Radiofluorination of the ylide precursor 1 with [18F]F-, followed by HPLC separation and formulation, produced the [18F]DAA1106 solution for injection in 6% average (n = 10) radiochemical yield (based on [18F]F-) with >98% radiochemical purity and molar activity of 60-100 GBq/µmol at the end of synthesis. The synthesis time was 87 min from the end of bombardment. The automated synthesis achieved [18F]DAA1106 with sufficient radioactivity available for preclinical and clinical use. Biodistribution study of [18F]DAA1106 showed a low uptake of radioactivity in the mouse bones. Metabolite analysis showed that >96% of total radioactivity in the mouse brain at 60 min after the radiotracer injection was unmetabolized [18F]DAA1106. PET study of ischemic rat brains visualized ischemic areas with a high uptake ratio (1.9 ±â€¯0.3) compared with the contralateral side. We have provided evidence that [18F]DAA1106 could be routinely produced for clinical studies.


Subject(s)
Acetamides/chemical synthesis , Fluorine Radioisotopes/chemistry , Phenyl Ethers/chemical synthesis , Positron-Emission Tomography/methods , Animals , Automation , Iodine/chemistry , Iodine/metabolism , Male , Mice , Rats , Rats, Sprague-Dawley , Tissue Distribution
16.
Bioorg Med Chem ; 25(24): 6435-6449, 2017 12 15.
Article in English | MEDLINE | ID: mdl-29107437

ABSTRACT

The obligate intracellular parasite, Trypanosoma cruzi is the etiologic agent of Chagas disease or American trypanosomiasis, which is the most prevalent parasitic disease in the Americas. The present chemotherapy to control this illness is still deficient particularly in the chronic stage of the disease. The ergosterol biosynthesis pathway has received much attention as a molecular target for the development of new drugs for Chagas disease. Especially, inhibitors of the enzymatic activity of squalene synthase were shown to be effective compounds on T. cruzi proliferation in in vitro assays. In the present study we designed, synthesized and evaluated the effect of a number of isosteric analogues of WC-9 (4-phenoxyphenoxyethyl thiocyanate), a known squalene synthase inhibitor, on T. cruzi growth in tissue culture cells. The selenium-containing derivatives turned out to be extremely potent inhibitors of T. cruzi growth. Certainly, 3-phenoxyphenoxyethyl, 4-phenoxyphenoxyethyl, 4-(3-fluorophenoxy)phenoxyethyl, 3-(3-fluorophenoxy)phenoxyethyl selenocyanates and (±)-5-phenoxy-2-(selenocyanatomethyl)-2,3-dihydrobenzofuran arose as relevant members of this family of compounds, which exhibited effective ED50 values of 0.084 µM, 0.11 µM, 0.083, µM, 0.085, and 0.075 µM, respectively. The results indicate that compounds bearing the selenocyanate moiety are at least two orders of magnitude more potent than the corresponding skeleton counterpart bearing the thiocyanate group. Surprisingly, these compounds exhibited excellent selectively index values ranging from 900 to 1800 making these molecules promising candidates as antiparasitic agents.


Subject(s)
Phenyl Ethers/pharmacology , Selenium/pharmacology , Thiocyanates/pharmacology , Trypanocidal Agents/pharmacology , Trypanosoma cruzi/drug effects , Animals , Cell Proliferation/drug effects , Cell Survival/drug effects , Chlorocebus aethiops , Dose-Response Relationship, Drug , Molecular Structure , Parasitic Sensitivity Tests , Phenyl Ethers/chemical synthesis , Phenyl Ethers/chemistry , Selenium/chemistry , Structure-Activity Relationship , Thiocyanates/chemical synthesis , Thiocyanates/chemistry , Trypanocidal Agents/chemical synthesis , Trypanocidal Agents/chemistry , Trypanosoma cruzi/cytology , Trypanosoma cruzi/growth & development , Vero Cells
17.
J Inorg Biochem ; 177: 412-422, 2017 12.
Article in English | MEDLINE | ID: mdl-28939002

ABSTRACT

We report the synthesis and characterization of three cyclometalated iridium(III) polypyridine complexes containing a 2,4-dinitrophenyl ether moiety [Ir(pq)2(N^N)](PF6) (Hpq=2-phenylquinoline; N^N=4-(N-(4-(2,4-dinitrophenoxy)benzyloxy)carbonyl)aminomethyl-4'-methyl-2,2'-bipyridine (bpy-dinitro-1) (1a), 4-(2,4-dinitrophenoxy)methyl-4'-methyl-2,2'-bipyridine (bpy-dinitro-2) (2a), 4-(4-(2,4-dinitrophenoxy)phenyl)-2,2'-bipyridine (bpy-dinitro-3) (3a)) as intracellular sensors for biothiols. Due to the quenching effect of the dinitroaromatic moiety, these complexes were extremely weakly emissive. Upon the reaction with biothiols, however, the emission was turned on as a consequence of the departure of the quenching unit. The results from a range of experiments demonstrated that complex 1a was noncytotoxic under the conditions used for confocal imaging, showed facile cellular uptake, and can serve as a phosphorogenic intracellular sensor for biothiols including glutathione (GSH) and hydrogen sulfide.


Subject(s)
2,2'-Dipyridyl/analogs & derivatives , 2,2'-Dipyridyl/chemistry , Coordination Complexes/chemistry , Fluorescent Dyes/chemistry , Iridium/chemistry , Sulfhydryl Compounds/analysis , 2,2'-Dipyridyl/metabolism , 2,2'-Dipyridyl/toxicity , Coordination Complexes/chemical synthesis , Coordination Complexes/metabolism , Coordination Complexes/toxicity , Cysteine/analysis , Fluorescent Dyes/chemical synthesis , Fluorescent Dyes/metabolism , Fluorescent Dyes/toxicity , Glutathione/analysis , HeLa Cells , Humans , Ligands , Phenyl Ethers/chemical synthesis , Phenyl Ethers/chemistry , Phenyl Ethers/metabolism , Phenyl Ethers/toxicity , Sulfides/analysis
18.
J Med Chem ; 60(16): 7029-7042, 2017 08 24.
Article in English | MEDLINE | ID: mdl-28682065

ABSTRACT

A series of acidic diaryl ether heterocyclic sulfonamides that are potent and subtype selective NaV1.7 inhibitors is described. Optimization of early lead matter focused on removal of structural alerts, improving metabolic stability and reducing cytochrome P450 inhibition driven drug-drug interaction concerns to deliver the desired balance of preclinical in vitro properties. Concerns over nonmetabolic routes of clearance, variable clearance in preclinical species, and subsequent low confidence human pharmacokinetic predictions led to the decision to conduct a human microdose study to determine clinical pharmacokinetics. The design strategies and results from preclinical PK and clinical human microdose PK data are described leading to the discovery of the first subtype selective NaV1.7 inhibitor clinical candidate PF-05089771 (34) which binds to a site in the voltage sensing domain.


Subject(s)
NAV1.7 Voltage-Gated Sodium Channel/metabolism , Phenyl Ethers/pharmacology , Sulfonamides/pharmacology , Voltage-Gated Sodium Channel Blockers/pharmacology , Cell Line , Cytochrome P-450 CYP2C9/metabolism , Cytochrome P-450 CYP2C9 Inhibitors/chemical synthesis , Cytochrome P-450 CYP2C9 Inhibitors/chemistry , Cytochrome P-450 CYP2C9 Inhibitors/pharmacokinetics , Cytochrome P-450 CYP2C9 Inhibitors/pharmacology , Cytochrome P-450 CYP3A/metabolism , Cytochrome P-450 CYP3A Inhibitors/chemical synthesis , Cytochrome P-450 CYP3A Inhibitors/chemistry , Cytochrome P-450 CYP3A Inhibitors/pharmacokinetics , Cytochrome P-450 CYP3A Inhibitors/pharmacology , Drug Design , Humans , Microsomes, Liver/metabolism , NAV1.7 Voltage-Gated Sodium Channel/chemistry , Phenyl Ethers/chemical synthesis , Phenyl Ethers/chemistry , Phenyl Ethers/pharmacokinetics , Structure-Activity Relationship , Sulfonamides/chemical synthesis , Sulfonamides/chemistry , Sulfonamides/pharmacokinetics , Voltage-Gated Sodium Channel Blockers/chemical synthesis , Voltage-Gated Sodium Channel Blockers/chemistry , Voltage-Gated Sodium Channel Blockers/pharmacokinetics
19.
Molecules ; 22(6)2017 Jun 09.
Article in English | MEDLINE | ID: mdl-28598373

ABSTRACT

We describe the first gram scale preparation of the reagent dichlorotrifluoromethoxyacetic acid. This stable compound is obtained in five steps starting from the cheap diethylene glycol. The reactivity of the sodium salt of this fluorinated acid was also tested and allowed the preparation of new amides.


Subject(s)
Acetates/chemical synthesis , Amides/chemical synthesis , Fluorine/chemistry , Indicators and Reagents/chemical synthesis , Phenyl Ethers/chemical synthesis , Chemistry Techniques, Synthetic , Ethylene Glycols/chemistry , Kinetics , Molecular Structure
20.
Molecules ; 22(5)2017 May 21.
Article in English | MEDLINE | ID: mdl-28531143

ABSTRACT

Hepatocellular carcinoma (HCC) is a leading cancer worldwide. Advanced HCCs are usually resistant to anticancer drugs, causing unsatisfactory chemotherapy outcomes. In this study, we showed that a 4-phenoxyphenol derivative, 4-[4-(4-hydroxyphenoxy)phenoxy]phenol (4-HPPP), exerts an inhibitory activity against two HCC cell lines, Huh7 and Ha22T. We further investigated the anti-HCC activities of 4-HPPP, including anti-proliferation and induction of apoptosis. Our results showed that higher dosage of 4-HPPP downregulates the expression of α-tubulin and causes nuclear enlargement in both the Huh-7 and Ha22T cell lines. Interestingly, the colony formation results showed a discrepancy in the inhibitory effect of 4-HPPP on HCC and rat liver epithelial Clone 9 cells, suggesting the selective cytotoxicity of 4-HPPP toward HCC cells. Furthermore, the cell proliferation and apoptosis assay results illustrated the differences between the two HCC cell lines. The results of cellular proliferation assays, including trypan blue exclusion and colony formation, revealed that 4-HPPP inhibits the growth of Huh7 cells, but exerts less cytotoxicity in Ha22T cells. Furthermore, the annexin V assay performed for detecting the apoptosis showed similar results. Western blotting results showed 4-HPPP caused the increase of pro-apoptotic factors including cleaved caspase-3, Bid and Bax in HCC cells, especially in Huh-7. Furthermore, an increase of autophagy-associated protein microtubule-associated protein-1 light chain-3B (LC3B)-II and the decrease of Beclin-1 and p62/SQSTM1 were observed following 4-HPPP treatment. Additionally, the level of γH2A histone family, member X (γH2AX), an endogenous DNA damage biomarker, was dramatically increased in Huh7 cells after 4-HPPP treatment, suggesting the involvement of DNA damage pathway in 4-HPPP-induced apoptosis. On the contrary, the western blotting results showed that treatment up-regulates pro-survival proteins, including the phosphorylation of protein kinase B (Akt) and the level of survivin on Ha22T cells, which may confer a resistance toward 4-HPPP. Notably, the blockade of extracellular signal-regulated kinases (ERK), but not Akt, enhanced the cytotoxicity of 4-HPPP against Ha22T cells, indicating the pro-survival role of ERK in 4-HPPP-induced anti-HCC effect. Our present work suggests that selective anti-HCC activity of 4-HPPP acts through induction of DNA damage. Accordingly, the combination of ERK inhibitor may significantly enhance the anti-cancer effect of 4-HPPP for those HCC cells which overexpress ERK in the future.


Subject(s)
Antineoplastic Agents/pharmacology , Apoptosis/drug effects , Autophagy/drug effects , Hepatocytes/drug effects , Phenyl Ethers/pharmacology , Tubulin/genetics , Animals , Antineoplastic Agents/chemical synthesis , BH3 Interacting Domain Death Agonist Protein/genetics , BH3 Interacting Domain Death Agonist Protein/metabolism , Beclin-1/genetics , Beclin-1/metabolism , Caspase 3/genetics , Caspase 3/metabolism , Cell Line , Cell Line, Tumor , DNA Damage , Epithelial Cells/cytology , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Extracellular Signal-Regulated MAP Kinases/genetics , Extracellular Signal-Regulated MAP Kinases/metabolism , Gene Expression Regulation , Hepatocytes/metabolism , Hepatocytes/pathology , Histones/genetics , Histones/metabolism , Humans , Microtubule-Associated Proteins/genetics , Microtubule-Associated Proteins/metabolism , Organ Specificity , Phenyl Ethers/chemical synthesis , Rats , Sequestosome-1 Protein/genetics , Sequestosome-1 Protein/metabolism , Signal Transduction , Tubulin/metabolism , bcl-2-Associated X Protein/genetics , bcl-2-Associated X Protein/metabolism
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