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1.
J Proteomics ; 192: 160-168, 2019 02 10.
Article in English | MEDLINE | ID: mdl-30189322

ABSTRACT

To adapt to xeric environments, microorganisms have evolved with the capability of the superior desiccation tolerance and rapid resuscitation after rehydration. Nostoc flagelliforme, a representative terrestrial cyanobacterium that is distributed in west and west-northern parts of China, serves as an ideal model for gaining insight in the physiological recovery mechanism. In this study, LC-MS/MS combined with isobaric chemical labeling technique (iTRAQ) was used to quantify dynamic changes of proteins in N. flagelliforme during the rehydration processes. Approximately 113 proteins were identified to be differentially expressed, with function mainly related to photosynthesis, defense response, biosynthesis, antioxidant system, and energy and carbohydrate metabolism. Among them, protective proteins including high light inducible proteins and antioxidants showed a down regulation trend during the rehydration process, while proteins involved in photosynthesis, biosynthesis and signaling pathways and regulation of gene expression tend to be up-regulated. These results might shed light on molecular mechanism for the N.flagelliforme response to hydration. SIGNIFICANCE: In this work, iTRAQ-based proteome expression profiling provides a holistic proteomic insight for N. flagelliforme in response to rehydration processes. Proteins involved in defense system could help to limit the damage to a repairable level and maintain cellular physiological integrity in the dried state. In addition, results in this work suggest that changes in expression of light-harvesting complexes phycobilisome is closely related to the switch of photosynthesis apparatus, while only a few proteins in PSI and PSII present significant expression change, which may indicate the integrity of PSI and PSII photosynthetic system.


Subject(s)
Bacterial Proteins/biosynthesis , Gene Expression Regulation, Bacterial , Nostoc/metabolism , Proteome/biosynthesis , Gene Expression Profiling , Photosystem I Protein Complex/biosynthesis , Photosystem II Protein Complex/biosynthesis , Phycobilisomes/biosynthesis , Proteomics
2.
Proc Natl Acad Sci U S A ; 115(33): E7824-E7833, 2018 08 14.
Article in English | MEDLINE | ID: mdl-30061392

ABSTRACT

Robust photosynthesis in chloroplasts and cyanobacteria requires the participation of accessory proteins to facilitate the assembly and maintenance of the photosynthetic apparatus located within the thylakoid membranes. The highly conserved Ycf48 protein acts early in the biogenesis of the oxygen-evolving photosystem II (PSII) complex by binding to newly synthesized precursor D1 subunit and by promoting efficient association with the D2 protein to form a PSII reaction center (PSII RC) assembly intermediate. Ycf48 is also required for efficient replacement of damaged D1 during the repair of PSII. However, the structural features underpinning Ycf48 function remain unclear. Here we show that Ycf48 proteins encoded by the thermophilic cyanobacterium Thermosynechococcus elongatus and the red alga Cyanidioschyzon merolae form seven-bladed beta-propellers with the 19-aa insertion characteristic of eukaryotic Ycf48 located at the junction of blades 3 and 4. Knowledge of these structures has allowed us to identify a conserved "Arg patch" on the surface of Ycf48 that is important for binding of Ycf48 to PSII RCs but also to larger complexes, including trimeric photosystem I (PSI). Reduced accumulation of chlorophyll in the absence of Ycf48 and the association of Ycf48 with PSI provide evidence of a more wide-ranging role for Ycf48 in the biogenesis of the photosynthetic apparatus than previously thought. Copurification of Ycf48 with the cyanobacterial YidC protein insertase supports the involvement of Ycf48 during the cotranslational insertion of chlorophyll-binding apopolypeptides into the membrane.


Subject(s)
Bacterial Proteins/metabolism , Cyanobacteria/metabolism , Photosystem II Protein Complex/biosynthesis , Bacterial Proteins/genetics , Cyanobacteria/genetics , Photosystem I Protein Complex/biosynthesis , Photosystem I Protein Complex/genetics , Photosystem II Protein Complex/genetics
3.
Adv Exp Med Biol ; 1080: 75-96, 2018.
Article in English | MEDLINE | ID: mdl-30091092

ABSTRACT

As the oldest oxygenic photoautotrophic prokaryotes, cyanobacteria have outstanding advantages as the chassis cell in the research field of synthetic biology. Cognition of photosynthetic mechanism, including the photoresponse mechanism under high-light (HL) conditions, is important for optimization of the cyanobacteria photoautotrophic chassis for synthesizing biomaterials as "microbial cell factories." Cyanobacteria are well-established model organisms for the study of oxygenic photosynthesis and have evolved various acclimatory responses to HL conditions to protect the photosynthetic apparatus from photodamage. Here, we reviewed the latest progress in the mechanism of HL acclimation in cyanobacteria. The subsequent acclimatory responses and the corresponding molecular mechanisms are included: (1) acclimatory responses of PSII and PSI; (2) the degradation of phycobilisome; (3) induction of the photoprotective mechanisms such as state transitions, OCP-dependent non-photochemical quenching, and the induction of HLIP family; and (4) the regulation mechanisms of the gene expression under HL.


Subject(s)
Acclimatization/physiology , Cyanobacteria , Gene Expression Regulation, Bacterial/physiology , Gene Expression Regulation, Enzymologic/physiology , Photosynthesis/physiology , Photosystem I Protein Complex , Photosystem II Protein Complex , Cyanobacteria/genetics , Cyanobacteria/metabolism , Photosystem I Protein Complex/biosynthesis , Photosystem I Protein Complex/genetics , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/genetics
4.
Proc Natl Acad Sci U S A ; 115(26): E6075-E6084, 2018 06 26.
Article in English | MEDLINE | ID: mdl-29891689

ABSTRACT

Photosystem II (PSII), a multisubunit protein complex of the photosynthetic electron transport chain, functions as a water-plastoquinone oxidoreductase, which is vital to the initiation of photosynthesis and electron transport. Although the structure, composition, and function of PSII are well understood, the mechanism of PSII biogenesis remains largely elusive. Here, we identified a nuclear-encoded pentatricopeptide repeat (PPR) protein LOW PHOTOSYNTHETIC EFFICIENCY 1 (LPE1; encoded by At3g46610) in Arabidopsis, which plays a crucial role in PSII biogenesis. LPE1 is exclusively targeted to chloroplasts and directly binds to the 5' UTR of psbA mRNA which encodes the PSII reaction center protein D1. The loss of LPE1 results in less efficient loading of ribosome on the psbA mRNA and great synthesis defects in D1 protein. We further found that LPE1 interacts with a known regulator of psbA mRNA translation HIGH CHLOROPHYLL FLUORESCENCE 173 (HCF173) and facilitates the association of HCF173 with psbA mRNA. More interestingly, our results indicate that LPE1 associates with psbA mRNA in a light-dependent manner through a redox-based mechanism. This study enhances our understanding of the mechanism of light-regulated D1 synthesis, providing important insight into PSII biogenesis and the functional maintenance of efficient photosynthesis in higher plants.


Subject(s)
Arabidopsis Proteins/biosynthesis , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Eukaryotic Initiation Factors/metabolism , Gene Expression Regulation, Plant , Light , Membrane Transport Proteins/metabolism , Photosystem II Protein Complex/biosynthesis , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Eukaryotic Initiation Factors/genetics , Membrane Transport Proteins/genetics , Photosystem II Protein Complex/genetics
5.
Environ Microbiol ; 20(2): 842-861, 2018 02.
Article in English | MEDLINE | ID: mdl-29266662

ABSTRACT

Microbialites are one of the oldest known ecosystems on Earth and the coordinated metabolisms and activities of these mineral-depositing communities have had a profound impact on the habitability of the planet. Despite efforts to understand the diversity and metabolic potential of these systems, there has not been a systematic molecular analysis of the transcriptional changes that occur within a living microbialite over time. In this study, we generated metatranscriptomic libraries from actively growing thrombolites, a type of microbialite, throughout diel and seasonal cycles and observed dynamic shifts in the population and metabolic transcriptional activity. The most transcribed genes in all seasons were associated with photosynthesis, but only transcripts associated with photosystem II exhibited diel cycling. Photosystem I transcripts were constitutively expressed at all time points including midnight and sunrise. Transcripts associated with nitrogen fixation, methanogenesis and dissimilatory sulfate reduction exhibited diel cycling, and variability between seasons. Networking analysis of the metatranscriptomes showed correlated expression patterns helping to elucidate how metabolic interactions are coordinated within the thrombolite community. These findings have identified distinctive temporal patterns within the thrombolites and will serve an important foundation to understand the mechanisms by which these communities form and respond to changes in their environment.


Subject(s)
Alphaproteobacteria/metabolism , Calcium Carbonate/metabolism , Cyanobacteria/metabolism , Deltaproteobacteria/metabolism , Geologic Sediments/chemistry , Geologic Sediments/microbiology , Ecosystem , Gene Expression Profiling , Gene Library , Nitrogen Fixation/genetics , Photosynthesis/genetics , Photosystem I Protein Complex/biosynthesis , Photosystem I Protein Complex/genetics , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/genetics , Seasons , Transcriptome/genetics
6.
BMC Res Notes ; 10(1): 168, 2017 Apr 26.
Article in English | MEDLINE | ID: mdl-28446247

ABSTRACT

BACKGROUND: Oxidative stress is considered to be involved in growth retardation of plants when they are exposed to a variety of biotic and abiotic stresses. Despite its potential importance in improving crop production, comparative studies on oxidative stress tolerance between rice (Oryza sativa L.) cultivars are limited. This work describes the difference in term of oxidative stress tolerance between 72 rice cultivars. METHODS: 72 rice cultivars grown under naturally lit greenhouse were used in this study. Excised leaf discs were subjected to a low concentration of methyl viologen (paraquat), a chemical reagent known to generate reactive oxygen species in chloroplast. Chlorophyll fluorescence analysis using a two-dimensional fluorescence meter, ion leakage analysis as well as the measurement of chlorophyll contents were used to evaluate the oxidative stress tolerance of leaf discs. Furthermore, fluorescence intensities were finely analyzed based on new fluorescence theories that we have optimized. RESULTS: Treatment of leaf discs with methyl viologen caused differential decrease of maximum quantum yield of photosystem II (Fv/Fm) between cultivars. Decrease of Fv/Fm was also closely correlated with increase of ion leakage and decrease of chlorophyll a/b ratio. Fv/Fm was factorized into photochemical and non-photochemical parameters to classify rice cultivars into sensitive and tolerant ones. Among the 72 compared rice cultivars, the traditional cultivar Co13 was identified as the most tolerant to oxidative stress. Koshihikari, a dominant modern Japonica cultivar in Japan as well as IR58, one of the modern Indica breeding lines exhibited a strong tolerance to oxidative stress. CONCLUSIONS: Close correlation between Fv/Fm and chlorophyll a/b ratio provides a simple method to estimate oxidative stress tolerance, without measurement of chlorophyll fluorescence with special equipment. The fact that modern cultivars, especially major cultivars possessed tolerance to oxidative stress suggests that oxidative stress tolerance is one of the agricultural traits prerequisite for improvement of modern rice cultivars. Data presented in this study would enable breeding of rice cultivars having strong tolerance to oxidative stress.


Subject(s)
Adaptation, Physiological , Chlorophyll/analysis , Oryza/drug effects , Photosystem II Protein Complex/analysis , Plant Leaves/drug effects , Chlorophyll/biosynthesis , Chlorophyll A , Crops, Agricultural/drug effects , Crops, Agricultural/growth & development , Crops, Agricultural/physiology , Hydrogen Peroxide/pharmacology , Ion Transport , Oryza/growth & development , Oryza/physiology , Oxidants/pharmacology , Oxidative Stress , Paraquat/pharmacology , Photosynthesis/drug effects , Photosynthesis/physiology , Photosystem II Protein Complex/biosynthesis , Plant Breeding , Plant Leaves/growth & development , Plant Leaves/physiology , Quantitative Trait, Heritable , Spectrometry, Fluorescence
7.
Plant Physiol Biochem ; 101: 43-53, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26852109

ABSTRACT

The response to high temperature stress, which influences the growth and development of grapes, varies between laboratory conditions and ambient growth conditions, and is poorly understood. In the present study, we investigated the effects of high temperature on grapevines (Vitis vinifera L. × Vitis labrusca L.) grown under artificial and ambient conditions. A temperature of 35 °C did not alter Photosystem II (PS II) activity and the expression of some heat-shock protein (HSPs) genes. These changes were, however, observed at 45 °C under artificial conditions, as well as when the ambient natural temperature was greater than 40 °C. Interestingly, these changes corresponded to shifts in PS II activity and HSPs expression. The protective mechanism of PS II was induced by temperatures greater than 40 °C. These data indicating that the expression of HSFA2, GLOS1 and some heat-shock protein (sHSPs) genes were more sensitive to the heat stress. Unlike the Kyoho grapevines, the Jumeigui grapevines showed rapid and dramatically deterioration in PS II activity and the expression of some heat response genes and HSP21, indicating that the Jumeigui grapevines could not counter the heat stress. These were some differences in PSII activity and the expression of heat response genes between the two cultivated conditions could be attributed to other environmental factors, inherent plant vigor, and the adaptation mechanism.


Subject(s)
Gene Expression Regulation, Plant/physiology , Heat-Shock Proteins/biosynthesis , Heat-Shock Response/physiology , Photosystem II Protein Complex/biosynthesis , Vitis/metabolism
8.
Biochim Biophys Acta ; 1857(3): 274-87, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26592144

ABSTRACT

Photosystem II (PSII), a large multisubunit membrane protein complex found in the thylakoid membranes of cyanobacteria, algae and plants, catalyzes light-driven oxygen evolution from water and reduction of plastoquinone. Biogenesis of PSII requires coordinated assembly of at least 20 protein subunits, as well as incorporation of various organic and inorganic cofactors. The stepwise assembly process is facilitated by numerous protein factors that have been identified in recent years. Further analysis of this process requires the development or refinement of specific methods for the identification of novel assembly factors and, in particular, elucidation of the unique role of each. Here we summarize current knowledge of PSII biogenesis in cyanobacteria, focusing primarily on the impact of methodological advances and innovations. This article is part of a Special Issue entitled Organization and dynamics of bioenergetic systems in bacteria, edited by Conrad Mullineaux.


Subject(s)
Bacterial Proteins/biosynthesis , Cyanobacteria/enzymology , Gene Expression Regulation, Bacterial/physiology , Gene Expression Regulation, Enzymologic/physiology , Photosystem II Protein Complex/biosynthesis , Protein Biosynthesis/physiology
9.
Biochem J ; 468(2): 315-24, 2015 Jun 01.
Article in English | MEDLINE | ID: mdl-25803492

ABSTRACT

Photosystem II (PS II) is a multi-subunit complex localized in the thylakoid membrane that performs the light-dependent photosynthetic charge separation. The PS II reaction centre comprises, among others, the D1 protein. De novo synthesis and repair of PS II require efficient mechanisms for transport and insertion of plastid encoded D1 into the thylakoid membrane. To elucidate the process of D1 insertion, we used an in vitro translation system derived from pea chloroplasts to reconstitute the D1 insertion. Thereby, truncated D1 encoding psbA mRNAs lacking a stop codon were translated in the presence of thylakoid membranes and the translation was stalled by addition of chloramphenicol. The generated ribosome nascent chain complexes (RNCs) were tightly associated with the thylakoids. Subsequently, these D1 insertion intermediates were enriched from solubilized thylakoids by sucrose cushion centrifugation. Immunological analyses demonstrated the presence of the cpSec translocase, Alb3, cpFtsY, cpSRP54 and Vipp1 (vesicle-inducing protein in plastids 1) in the enriched D1 insertion intermediates. A complex formation between cpSecY, Alb3, cpFtsY and Vipp1 in thylakoid membranes was shown by gel filtration chromatography, BN (Blue Native)/SDS-PAGE and co-immunoprecipitation experiments. Furthermore, a stimulating effect of recombinant Vipp1 on the formation of a D1 insertion intermediate was observed in vitro. These results suggest a co-operative function of these proteins in D1 insertion.


Subject(s)
Arabidopsis Proteins/metabolism , Chloroplasts/metabolism , Intracellular Membranes/metabolism , Membrane Proteins/metabolism , Photosystem II Protein Complex/biosynthesis , Plant Proteins/metabolism , Thylakoids/metabolism , Arabidopsis/metabolism , Chromatography, Gel , Immunoprecipitation , In Vitro Techniques , Light , Pisum sativum/metabolism , Protein Biosynthesis
10.
PLoS One ; 9(12): e114211, 2014.
Article in English | MEDLINE | ID: mdl-25470731

ABSTRACT

Due to the selective attenuation of solar light and the absorption properties of seawater and seawater constituents, free-floating photosynthetic organisms have to cope with rapid and unpredictable changes in both intensity and spectral quality. We have studied the transcriptional, metabolic and photo-physiological responses to light of different spectral quality in the marine diatom Phaeodactylum tricornutum through time-series studies of cultures exposed to equal doses of photosynthetically usable radiation of blue, green and red light. The experiments showed that short-term differences in gene expression and profiles are mainly light quality-dependent. Transcription of photosynthesis-associated nuclear genes was activated mainly through a light quality-independent mechanism likely to rely on chloroplast-to-nucleus signaling. In contrast, genes encoding proteins important for photoprotection and PSII repair were highly dependent on a blue light receptor-mediated signal. Changes in energy transfer efficiency by light-harvesting pigments were spectrally dependent; furthermore, a declining trend in photosynthetic efficiency was observed in red light. The combined results suggest that diatoms possess a light quality-dependent ability to activate photoprotection and efficient repair of photodamaged PSII. In spite of approximately equal numbers of PSII-absorbed quanta in blue, green and red light, the spectral quality of light is important for diatom responses to ambient light conditions.


Subject(s)
Diatoms/physiology , Photosynthesis/genetics , Carotenoids/biosynthesis , Chlorophyll/biosynthesis , Chlorophyll/genetics , Chlorophyll A , Chloroplasts/metabolism , Diatoms/radiation effects , Light , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/genetics , Transcription, Genetic , Transcriptional Activation/radiation effects , Transcriptome
11.
Plant J ; 78(6): 1003-13, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24684167

ABSTRACT

A chloroplast protein disulfide isomerase (PDI) was previously proposed to regulate translation of the unicellular green alga Chlamydomonas reinhardtii chloroplast psbA mRNA, encoding the D1 protein, in response to light. Here we show that AtPDI6, one of 13 Arabidopsis thaliana PDI genes, also plays a role in the chloroplast. We found that AtPDI6 is targeted and localized to the chloroplast. Interestingly, AtPDI6 knockdown plants displayed higher resistance to photoinhibition than wild-type plants when exposed to a tenfold increase in light intensity. The AtPDI6 knockdown plants also displayed a higher rate of D1 synthesis under a similar light intensity. The increased resistance to photoinhibition may not be rationalized by changes in antenna or non-photochemical quenching. Thus, the increased D1 synthesis rate, which may result in a larger proportion of active D1 under light stress, may led to the decrease in photoinhibition. These results suggest that, although the D1 synthesis rates observed in wild-type plants under high light intensities are elevated, repair can potentially occur faster. The findings implicate AtPDI6 as an attenuator of D1 synthesis, modulating photoinhibition in a light-regulated manner.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Chloroplast Proteins/metabolism , Photosystem II Protein Complex/biosynthesis , Protein Disulfide-Isomerases/metabolism , Arabidopsis/genetics , Arabidopsis/radiation effects , Arabidopsis Proteins/genetics , Chloroplast Proteins/genetics , Chloroplasts/genetics , Chloroplasts/metabolism , Chloroplasts/radiation effects , Gene Knockdown Techniques , Light Signal Transduction , Protein Disulfide-Isomerases/genetics , RNA, Messenger/metabolism
12.
Plant J ; 78(2): 344-56, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24612058

ABSTRACT

Assembly of photosystem II (PSII) occurs sequentially and requires several auxiliary proteins, such as ALB3 (ALBINO3). Here, we describe the role of the Arabidopsis thaliana thylakoid membrane protein Tellurite resistance C (AtTerC) in this process. Knockout of AtTerC was previously shown to be seedling-lethal. This phenotype was rescued by expressing TerC fused C-terminally to GFP in the terc-1 background, and the resulting terc-1TerC- GFP line and an artificial miRNA-based knockdown allele (amiR-TerC) were used to analyze the TerC function. The alterations in chlorophyll fluorescence and thylakoid ultrastructure observed in amiR-TerC plants and terc-1TerC- GFP were attributed to defects in PSII. We show that this phenotype resulted from a reduction in the rate of de novo synthesis of PSII core proteins, but later steps in PSII biogenesis appeared to be less affected. Yeast two-hybrid assays showed that TerC interacts with PSII proteins. In particular, its interaction with the PSII assembly factor ALB3 has been demonstrated by co-immunoprecipitation. ALB3 is thought to assist in incorporation of CP43 into PSII via interaction with Low PSII Accumulation2 (LPA2) Low PSII Accumulation3 (LPA3). Homozygous lpa2 mutants expressing amiR-TerC displayed markedly exacerbated phenotypes, leading to seedling lethality, indicating an additive effect. We propose a model in which TerC, together with ALB3, facilitates de novo synthesis of thylakoid membrane proteins, for instance CP43, at the membrane insertion step.


Subject(s)
Arabidopsis Proteins/physiology , Arabidopsis/physiology , Membrane Proteins/physiology , Photosystem II Protein Complex/biosynthesis , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Gene Expression Regulation, Plant , Membrane Proteins/genetics , Membrane Proteins/metabolism , Phenotype , Thylakoids/metabolism
13.
J Biol Chem ; 289(3): 1841-51, 2014 Jan 17.
Article in English | MEDLINE | ID: mdl-24297184

ABSTRACT

ChlR activates the transcription of the chlAII-ho2-hemN operon in response to low-oxygen conditions in the cyanobacterium Synechocystis sp. PCC 6803. Three genes in the operon encode low-oxygen-type enzymes to bypass three oxygen-dependent reactions in tetrapyrrole biosynthesis. A chlR-lacking mutant, ΔchlR, shows poor photoautotrophic growth due to low chlorophyll (Chl) content under low-oxygen conditions, which is caused by no induction of the operon. Here, we characterized the processes of etiolation of ΔchlR cells in low-oxygen conditions and the subsequent regreening of the etiolated cells upon exposure to oxygen, by HPLC, Western blotting, and low-temperature fluorescence spectra. The Chl content of the etiolated ΔchlR cells incubated under low-oxygen conditions for 7 days was only 10% of that of the wild-type with accumulation of almost all intermediates of the magnesium branch of Chl biosynthesis. Both photosystem I (PSI) and photosystem II (PSII) were significantly decreased, accompanied by a preferential decrease of antenna Chl in PSI. Upon exposure to oxygen, the etiolated ΔchlR cells resumed to produce Chl after a short lag (∼2 h), and the level at 72 h was 80% of that of the wild-type. During this novel "oxygen-induced" greening process, the PSI and PSII contents were largely increased in parallel with the increase in Chl contents. After 72 h, the PSI content reached ∼50% of the wild-type level in contrast to the full recovery of PSII. ΔchlR provides a promising alternative system to investigate the biogenesis of PSI and PSII.


Subject(s)
Adaptation, Physiological , Bacterial Proteins , Chlorophyll/biosynthesis , Mutation , Oxygen/metabolism , Synechocystis/metabolism , Transcription Factors , Chlorophyll/genetics , Photosystem I Protein Complex/biosynthesis , Photosystem I Protein Complex/genetics , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/genetics , Synechocystis/genetics
14.
Plant Physiol ; 163(4): 1710-28, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24151299

ABSTRACT

Chloroplastic m-type thioredoxins (TRX m) are essential redox regulators in the light regulation of photosynthetic metabolism. However, recent genetic studies have revealed novel functions for TRX m in meristem development, chloroplast morphology, cyclic electron flow, and tetrapyrrole synthesis. The focus of this study is on the putative role of TRX m1, TRX m2, and TRX m4 in the biogenesis of the photosynthetic apparatus in Arabidopsis (Arabidopsis thaliana). To that end, we investigated the impact of single, double, and triple TRX m deficiency on chloroplast development and the accumulation of thylakoid protein complexes. Intriguingly, only inactivation of three TRX m genes led to pale-green leaves and specifically reduced stability of the photosystem II (PSII) complex, implying functional redundancy between three TRX m isoforms. In addition, plants silenced for three TRX m genes displayed elevated levels of reactive oxygen species, which in turn interrupted the transcription of photosynthesis-related nuclear genes but not the expression of chloroplast-encoded PSII core proteins. To dissect the function of TRX m in PSII biogenesis, we showed that TRX m1, TRX m2, and TRX m4 interact physically with minor PSII assembly intermediates as well as with PSII core subunits D1, D2, and CP47. Furthermore, silencing three TRX m genes disrupted the redox status of intermolecular disulfide bonds in PSII core proteins, most notably resulting in elevated accumulation of oxidized CP47 oligomers. Taken together, our results suggest an important role for TRX m1, TRX m2, and TRX m4 proteins in the biogenesis of PSII, and they appear to assist the assembly of CP47 into PSII.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Chloroplast Thioredoxins/metabolism , Chloroplasts/metabolism , Photosystem II Protein Complex/biosynthesis , Thioredoxins/metabolism , Arabidopsis/genetics , Arabidopsis/ultrastructure , Arabidopsis Proteins/genetics , Chlorophyll/metabolism , Chloroplast Thioredoxins/genetics , Chloroplasts/ultrastructure , Conserved Sequence , Disulfides/metabolism , Gene Expression Regulation, Plant , Gene Silencing , Genes, Plant , Green Fluorescent Proteins/metabolism , Immunoblotting , Oxidation-Reduction , Phenotype , Plant Leaves/metabolism , Protein Subunits/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reactive Oxygen Species/metabolism , Reproducibility of Results , Spectrometry, Fluorescence , Thioredoxins/genetics , Thylakoids/metabolism
15.
Proc Natl Acad Sci U S A ; 110(40): 16247-52, 2013 Oct 01.
Article in English | MEDLINE | ID: mdl-24043802

ABSTRACT

Photosystem II (PSII) reaction center protein D1 is synthesized as a precursor (pD1) with a short C-terminal extension. The pD1 is processed to mature D1 by carboxyl-terminal peptidase A to remove the C-terminal extension and form active protein. Here we report functional characterization of the Arabidopsis gene encoding D1 C-terminal processing enzyme (AtCtpA) in the chloroplast thylakoid lumen. Recombinant AtCtpA converted pD1 to mature D1 and a mutant lacking AtCtpA retained all D1 in precursor form, confirming that AtCtpA is solely responsible for processing. As with cyanobacterial ctpa, a knockout Arabidopsis atctpa mutant was lethal under normal growth conditions but was viable with sucrose under low-light conditions. Viable plants, however, showed deficiencies in PSII and thylakoid stacking. Surprisingly, unlike its cyanobacterial counterpart, the Arabidopsis mutant retained both monomer and dimer forms of the PSII complexes that, although nonfunctional, contained both the core and extrinsic subunits. This mutant was also essentially devoid of PSII supercomplexes, providing an unexpected link between D1 maturation and supercomplex assembly. A knock-down mutant expressing about 2% wild-type level of AtCtpA showed normal growth under low light but was stunted and accumulated pD1 under high light, indicative of delayed C-terminal processing. Although demonstrating the functional significance of C-terminal D1 processing in PSII biogenesis, our study reveals an unsuspected link between D1 maturation and PSII supercomplex assembly in land plants, opening an avenue for exploring the mechanism for the association of light-harvesting complexes with the PSII core complexes.


Subject(s)
Arabidopsis/metabolism , Endopeptidases/metabolism , Light-Harvesting Protein Complexes/metabolism , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/physiology , Electrophoresis, Polyacrylamide Gel , Endopeptidases/genetics , Fluorescence , Gene Knockdown Techniques , Reverse Transcriptase Polymerase Chain Reaction , Thylakoids/metabolism
16.
J Biol Chem ; 288(38): 27594-27606, 2013 Sep 20.
Article in English | MEDLINE | ID: mdl-23913686

ABSTRACT

It is a little known fact that plastoquinone-9, a vital redox cofactor of photosynthesis, doubles as a precursor for the biosynthesis of a vitamin E analog called plastochromanol-8, the physiological significance of which has remained elusive. Gene network reconstruction, GFP fusion experiments, and targeted metabolite profiling of insertion mutants indicated that Arabidopsis possesses two paralogous solanesyl-diphosphate synthases, AtSPS1 (At1g78510) and AtSPS2 (At1g17050), that assemble the side chain of plastoquinone-9 in plastids. Similar paralogous pairs were detected throughout terrestrial plant lineages but were not distinguished in the literature and genomic databases from mitochondrial homologs involved in the biosynthesis of ubiquinone. The leaves of the atsps2 knock-out were devoid of plastochromanol-8 and displayed severe losses of both non-photoactive and photoactive plastoquinone-9, resulting in near complete photoinhibition at high light intensity. Such a photoinhibition was paralleled by significant damage to photosystem II but not to photosystem I. In contrast, in the atsps1 knock-out, a small loss of plastoquinone-9, restricted to the non-photoactive pool, was sufficient to eliminate half of the plastochromanol-8 content of the leaves. Taken together, these results demonstrate that plastochromanol-8 originates from a subfraction of the non-photoactive pool of plastoquinone-9. In contrast to other plastochromanol-8 biosynthetic mutants, neither the single atsps knock-outs nor the atsps1 atsps2 double knock-out displayed any defects in tocopherols accumulation or germination.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Chloroplast Proteins/metabolism , Models, Biological , Plastids/metabolism , Plastoquinone/metabolism , Alkyl and Aryl Transferases/genetics , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Chloroplast Proteins/genetics , Chromans/metabolism , Gene Knockdown Techniques , Germination/physiology , Photosystem I Protein Complex/biosynthesis , Photosystem I Protein Complex/genetics , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/genetics , Plastids/genetics , Tocopherols/metabolism , Vitamin E/analogs & derivatives , Vitamin E/genetics , Vitamin E/metabolism
17.
FEBS Lett ; 587(9): 1340-5, 2013 May 02.
Article in English | MEDLINE | ID: mdl-23499432

ABSTRACT

Diatoms can survive for long periods in the dark. However, how biosynthesis of photosynthetic proteins contributes to survival in the dark is poorly understood. Using a radiolabeling technique, we examined whether de novo biosynthesis and assembly of photosynthetic proteins differs in light-adapted vs. dark-adapted marine diatoms (Chaetoceros gracilis). In light-adapted cells, D1 protein was heavily radiolabeled owing to rapid turnover of photosystem II (PSII). In dark-adapted cells (>24 h), the radiolabeling patterns of PSII components changed, but the PSII dimer still formed. Therefore, diatoms may regulate the biosynthesis of photosynthetic proteins for long-term survival in the dark.


Subject(s)
Diatoms/metabolism , Diatoms/radiation effects , Light , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/chemistry , Protein Multimerization/radiation effects , Adaptation, Physiological/radiation effects , Cell Proliferation/radiation effects , Darkness , Diatoms/cytology , Diatoms/physiology , Protein Structure, Quaternary
18.
Photochem Photobiol ; 89(2): 384-90, 2013.
Article in English | MEDLINE | ID: mdl-23094999

ABSTRACT

Damage of DNA and Photosystem-II are among the most significant effects of UV-B irradiation in photosynthetic organisms. Both damaged DNA and Photosystem-II can be repaired, which represent important defense mechanisms against detrimental UV-B effects. Correlation of Photosystem-II damage and repair with the concurrent DNA damage and repair was investigated in the cyanobacterium Synechocystis PCC6803 using its wild type and a photolyase deficient mutant, which is unable to repair UV-B induced DNA damages. A significant amount of damaged DNA accumulated during UV-B exposure in the photolyase mutant concomitant with decreased Photosystem-II activity and D1 protein amount. The transcript level of psbA3, which is a UV-responsive copy of the psbA gene family encoding the D1 subunit of the Photosystem-II reaction center, is also decreased in the photolyase mutant. The wild-type cells, however, did not accumulate damaged DNA during UV-B exposure, suffered smaller losses of Photosystem-II activity and D1 protein, and maintained higher level of psbA3 transcripts than the photolyase mutant. It is concluded that the repair capacity of Photosystem-II depends on the ability of cells to repair UV-B-damaged DNA through maintaining the transcription of genes, which are essential for protein synthesis-dependent repair of the Photosystem-II reaction center.


Subject(s)
Bacterial Proteins/genetics , DNA Repair , DNA, Bacterial/chemistry , Deoxyribodipyrimidine Photo-Lyase/genetics , Photosystem II Protein Complex/genetics , Synechocystis/radiation effects , Bacterial Proteins/biosynthesis , DNA Damage , DNA, Bacterial/metabolism , Deoxyribodipyrimidine Photo-Lyase/deficiency , Photosynthesis/physiology , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/metabolism , Protein Biosynthesis/radiation effects , Protein Isoforms/genetics , Protein Isoforms/metabolism , Synechocystis/genetics , Synechocystis/metabolism , Transcription, Genetic/radiation effects , Ultraviolet Rays
19.
Biochem Biophys Res Commun ; 426(3): 390-4, 2012 Sep 28.
Article in English | MEDLINE | ID: mdl-22960180

ABSTRACT

Brassinosteroids (BRs) play important roles in plant growth, development, photosynthesis and stress tolerance; however, the mechanism underlying BR-enhanced photosynthesis is currently unclear. Here, we provide evidence that an increase in the BR level increased the quantum yield of PSII, activities of Rubisco activase (RCA) and fructose-1,6-bisphosphatase (FBPase), and CO(2) assimilation. BRs upregulated the transcript levels of genes and activity of enzymes involved in the ascorbate-glutathione cycle in the chloroplasts, leading to an increased ratio of reduced (GSH) to oxidized (GSSG) glutathione in the chloroplasts. An increased GSH/GSSG ratio protected RCA from proteolytic digestion and increased the stability of redox-sensitive enzymes in the chloroplasts. These results strongly suggest that BRs are capable of regulating the glutathione redox state in the chloroplasts through the activation of the ascorbate-glutathione cycle. The resulting increase in the chloroplast thiol reduction state promotes CO(2) assimilation, at least in part, by enhancing the stability and activity of redox-sensitive photosynthetic enzymes through post-translational modifications.


Subject(s)
Brassinosteroids/biosynthesis , Carbon Dioxide/metabolism , Chloroplasts/enzymology , Cucumis sativus/enzymology , Ascorbic Acid/biosynthesis , Electron Transport , Enzyme Stability , Fructose-Bisphosphatase/biosynthesis , Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphatase/genetics , Gene Expression Regulation, Enzymologic , Glutathione/biosynthesis , Glutathione Disulfide/metabolism , Oxidation-Reduction , Photosynthesis , Photosystem II Protein Complex/biosynthesis , Photosystem II Protein Complex/chemistry , Photosystem II Protein Complex/genetics , Plant Proteins/biosynthesis , Plant Proteins/chemistry , Plant Proteins/genetics , Protein Processing, Post-Translational , Proteolysis
20.
Plant Cell ; 24(2): 660-75, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22319052

ABSTRACT

In the cyanobacterium Synechocystis sp PCC 6803, early steps in thylakoid membrane (TM) biogenesis are considered to take place in specialized membrane fractions resembling an interface between the plasma membrane (PM) and TM. This region (the PratA-defined membrane) is defined by the presence of the photosystem II (PSII) assembly factor PratA (for processing-associated TPR protein) and the precursor of the D1 protein (pD1). Here, we show that PratA is a Mn(2+) binding protein that contains a high affinity Mn(2+) binding site (K(d) = 73 µM) and that PratA is required for efficient delivery of Mn(2+) to PSII in vivo, as Mn(2+) transport is retarded in pratA(-). Furthermore, ultrastructural analyses of pratA(-) depict changes in membrane organization in comparison to the wild type, especially a semicircle-shaped structure, which appears to connect PM and TM, is lacking in pratA(-). Immunogold labeling located PratA and pD1 to these distinct regions at the cell periphery. Thus, PratA is necessary for efficient delivery of Mn(2+) to PSII, leading to Mn(2+) preloading of PSII in the periplasm. We propose an extended model for the spatial organization of Mn(2+) transport to PSII, which is suggested to take place concomitantly with early steps of PSII assembly in biogenesis centers at the cell periphery.


Subject(s)
Manganese/metabolism , Photosystem II Protein Complex/biosynthesis , Synechocystis/metabolism , Thylakoids/metabolism , Bacterial Proteins/metabolism , Binding Sites , Periplasm/metabolism
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