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1.
Mycologia ; 113(6): 1327-1342, 2021.
Article in English | MEDLINE | ID: mdl-34533412

ABSTRACT

A new nivicolous myxomycete is described as a result of a comprehensive study of Didymium nivicola collections from the entire range of its occurrence. Statistical analysis of 12 morphological characters, phylogenetic analyses of nuc 18S rDNA and elongation factor 1-alpha gene (EF1A), and a delimitation method (automatic barcode gap diversity) have been applied to corroborate the identity of the new species. A preliminary morphological analysis of D. nivicola revealed high variability of South American populations where four types of spore ornamentation were noted. However, results of molecular study and statistical analysis of morphological characters did not support recognition of these four forms but the distinction of two morphotypes. Consequently, two species have been recognized: D. nivicola and the newly proposed D. pseudonivicola. The new species can be distinguished from D. nivicola by distinctly larger and mostly plasmodiocarpic sporophores, which are scattered to gregarious, paler spores, and by the paler, more delicate and more elastic capillitium. Spore ornamentation of D. pseudonivicola is uniform and can be described as distinctly spiny (pilate under scanning electron microscope [SEM]), whereas those of D. nivicola is more variable, where spines (pilae under SEM) are delicate, distinct, or conspicuous. Additionally, whereas D. nivicola is a species distributed worldwide, D. pseudonivicola occurs only in the austral Andes of Argentina and Chile.


Subject(s)
Myxomycetes , Physarida , Argentina , DNA, Ribosomal/genetics , Myxomycetes/genetics , Phylogeny , Physarida/genetics
2.
Mycologia ; 109(6): 993-1002, 2017.
Article in English | MEDLINE | ID: mdl-29533140

ABSTRACT

A new species of Didymium (Myxomycetes), D. azorellae, isolated from plant debris in a moist chamber, collected during studies of cold arid areas of Argentina and Peru, is described. It can be distinguished by its small size, the tightly packed layer of lime crystals on the peridium, the very scant, or absent, capillitium, and the unique spore ornamentation, especially by scanning electron microscopy. The species developed on dead leaves of cushion plants growing in the extremely harsh environments of the central Andean puna at almost 5000 m elevation and the Andino-Patagonian steppe. Morphology was examined with scanning electron microscopy and light microscopy, and micrographs of relevant details are included here. In order to confirm the identity of the new species described in this paper, a molecular study was conducted based on partial sequences of both the 18S rRNA and the elongation factor 1-alpha gene. Phylogenetic analysis including two specimens from different countries of the newly described species, Didymium azorellae, strongly supports the grouping of these specimens as a separate clade from the rest of the analyzed species.


Subject(s)
Physarida/classification , Physarida/isolation & purification , Argentina , Cluster Analysis , Cold Temperature , DNA, Protozoan/chemistry , DNA, Protozoan/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Desert Climate , Environmental Microbiology , Microscopy , Microscopy, Electron, Scanning , Peru , Phylogeny , Physarida/cytology , Physarida/genetics , RNA, Ribosomal, 18S/genetics , Sequence Analysis, DNA , Spores, Protozoan/cytology
3.
Mycologia ; 98(1): 51-6, 2006.
Article in English | MEDLINE | ID: mdl-16800304

ABSTRACT

To test whether the timing of transition to mating competency affected mitochondrial transmission patterns in D. iridis. Reciprocal crosses were made by combining mating compatible strains that differed in their competency to mate. The results were compared to crosses where both mating strains were competent at the time of combining and crosses where somatic fusion of plasmodia was allowed. The results show that the mating competency of the parental strains at the time of confronting a compatible mate does not affect mitochondrial transmission patterns, mating efficiency or the likelihood of biparental inheritance. However the timing of plasmodial formation is delayed when precompetent and competent strains are mated compared to when both strains are competent at the time of mixing. We also observed that somatic fusion of plasmodia did not appreciably increase the incidence of biparental inheritance compared to crosses where individual plasmodia were isolated. These results provide additional evidence of the variable nature of mitochondrial inheritance in D. iridis within crosses and between mating trials.


Subject(s)
Genes, Mitochondrial , Physarida/genetics , Animals , Crosses, Genetic , DNA, Mitochondrial/genetics , DNA, Protozoan/genetics , Mitochondria/physiology , Nucleic Acid Hybridization , Physarida/cytology , Physarida/growth & development
4.
RNA Biol ; 3(4): 157-62, 2006 Oct.
Article in English | MEDLINE | ID: mdl-17361110

ABSTRACT

Two different isolates of the myxomycete Didymium iridis harbour homing endonuclease genes that are expressed from group I introns inserted into identical sites within the small subunit ribosomal DNA. The homing endonuclease proteins are related in sequence, and their gene structures share similar features such as the presence of small spliceosomal introns and functional polyadenylation sites. However, they are transcribed from opposite strands of the ribosomal DNA and presumable by different RNA polymerases. We have previously described the in vivo expression of the I-DirI homing endonuclease from within the ribosomal RNA precursor. In this paper, we demonstrate the in vivo expression of the I-DirII homing endonuclease from the opposite strand of the Didymium rRNA gene. A comparison of the expression strategies of the two genes demonstrates the feasibility of antisense expression and provides insight into nucleolar gene expression.


Subject(s)
DNA, Antisense/genetics , DNA, Ribosomal/genetics , Endodeoxyribonucleases/genetics , Introns/genetics , Physarida/genetics , Amino Acid Sequence , Animals , Base Sequence , Molecular Sequence Data , Physarida/enzymology
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