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1.
Arch Microbiol ; 203(7): 3851-3867, 2021 Sep.
Article in English | MEDLINE | ID: mdl-34013420

ABSTRACT

Piper longum (also known as Indian long pepper) is widely used in Ayurvedic, Siddha and Unani medicine systems. The principle bioactive compound of this plant is piperine, which mainly accumulates in the fruits called spikes. The report of piperine production by endophytic microbes isolated from Piper sp., motivated us to investigate the endophytic microbial diversity associated with the spikes vis-à-vis leaves (which contain negligible levels of piperine). This is the first report to use metagenomics approach to unravel the endophytic microbial diversity in P. longum. Our results indicate that 2, 56, 631 bacterial OTUs and 1090 fungal OTUs were picked cumulatively from both the tissues. Although bacterial and fungal endophytes occupy the same niche, remarkable differences exist in their diversity and abundance. For instance, the most abundant bacterial genera in spikes were Nocardioides and Pseudonocardia (Phylum Actinobacteria; reported to produce bioactive compounds); while, in leaves were Larkinella and Hymenobacter (Phylum Bacteriodetes). Likewise, the fungal endophytes, Periconia, Cladosporium and Coniothyrium (which have been earlier reported to produce commercially important metabolites including piperine), were also present in high abundance in spikes, in comparison to leaves. Further, the results of PICRUSt analysis reveal the high metabolic potential of spike-associated bacteria for secondary metabolism, namely biosynthesis of alkaloids (including pyridine/piperidine), terpenes, flavonoids and antibiotics. Therefore, our findings indicate that the endophytes abundant or unique in spikes could be explored for bioprospecting of novel/commercially important metabolites; an approach that has both ecological and economical benefits.


Subject(s)
Bioprospecting , Piper , RNA, Ribosomal, 16S , Bacteria/classification , Bacteria/genetics , DNA, Ribosomal Spacer/genetics , Endophytes/chemistry , Endophytes/genetics , Fungi/chemistry , Fungi/classification , Fungi/genetics , Piper/chemistry , Piper/genetics , Piper/microbiology , Plant Leaves/genetics , Plant Leaves/microbiology , RNA, Ribosomal, 16S/genetics
2.
J Appl Microbiol ; 130(2): 561-569, 2021 Feb.
Article in English | MEDLINE | ID: mdl-31340085

ABSTRACT

AIMS: To evaluate the production of biosurfactants by fungi isolated from the Amazonian species Piper hispidum (Piperaceae), and to determine the physico-chemical properties of the crude biosurfactant obtained from the most promising fungi. METHODS AND RESULTS: A total of 117 endophytic fungi were isolated, and 50 were used to verify the production of biosurfactants. Of these, eight presented positive results in the drop collapse test, and emulsification index ranging from 20 to 78%. The most promising fungi, Ph III 23L and Ph II 22S (identified as Aspergillus niger and Glomerella cingulata, respectively) were recultivated for extraction and analysis of the biosurfactant's physico-chemical characteristics. The cultivation broth that presented the greatest decrease in surface tension (36%) was that of the A. niger, which reduced it from 68·0 to 44·0 mN m-1 . The lowest critical micellar concentration value was found for the same endophyte (14·93 mg ml-1 ). CONCLUSIONS: Endophytes of P. hispidum proved to be interesting producers of biosurfactants and presented promising physico-chemical characteristics for applications in diverse industrial sectors. SIGNIFICANCE AND IMPACT OF THE STUDY: Piper hispidum endophytic fungi can be used as a new source of biosurfactants, as these molecules present a significant market due to their wide industrial applications.


Subject(s)
Endophytes/metabolism , Fungi/metabolism , Piper/microbiology , Surface-Active Agents/metabolism , Culture Media, Conditioned/chemistry , Endophytes/classification , Endophytes/isolation & purification , Fungi/classification , Fungi/isolation & purification , Micelles , Surface Tension , Surface-Active Agents/chemistry
3.
Int J Biol Macromol ; 165(Pt A): 1507-1518, 2020 Dec 15.
Article in English | MEDLINE | ID: mdl-33038402

ABSTRACT

The study demonstrates the use of chitosan as a carrier agent of designed antifungal formulation (CME 4:1:1) based on a combination of plant compounds such as trans- cinnamaldehyde (C), methyl eugenol (M), and estragole (E). The formulation was encapsulated inside the chitosan biopolymer nanomatrix (Ne-CME) and characterized by SEM, FTIR, and XRD. The Ne-CME exhibited enhanced antifungal and aflatoxin B1 inhibitory effect compared to the individual compounds and unencapsulated form. Ne-CME (0.04 µl/ml) caused significant protection of Piper longum fruit from fungal (90.05%) and aflatoxin B1 (100%) contamination and had no significant negative effects on its nutritional properties. In addition, the probable antifungal mechanism of Ne-CME was investigated using in-silico (effect on Omt-1 and Vbs structural genes of AFB1 biosynthesis) and biochemical (perturbances in the cell membrane, carbohydrate catabolism, methyl-glyoxal, mitochondrial membrane potential, and antioxidant defense system) assay.


Subject(s)
Aflatoxin B1/antagonists & inhibitors , Antifungal Agents/chemistry , Chitosan/chemistry , Nanoparticles/chemistry , Aflatoxin B1/toxicity , Antifungal Agents/pharmacology , Antioxidants/chemistry , Antioxidants/pharmacology , Aspergillus flavus/drug effects , Aspergillus flavus/pathogenicity , Biopolymers/chemistry , Biopolymers/pharmacology , Chitosan/pharmacology , Oils, Volatile/chemistry , Oils, Volatile/pharmacology , Piper/drug effects , Piper/microbiology
4.
J Biotechnol ; 314-315: 53-62, 2020 May 20.
Article in English | MEDLINE | ID: mdl-32302654

ABSTRACT

Black pepper is an important commodity crop in Malaysia that generates millions of annual revenue for the country. However, black pepper yield is affected by slow decline disease caused by a soil-borne fungus Fusarium solani. RNA sequencing transcriptomics approach has been employed in this study to explore the differential gene expression in susceptible Piper nigrum L. and resistant Piper colubrinum Link. Gene expression comparative analysis of the two pepper species has yielded 2,361 differentially expressed genes (DEGs). Among them, higher expression of 1,426 DEGs was detected in resistant plant. These DEGs practically demonstrated the major branches of plant-pathogen interaction pathway (Path: ko04626). We selected five groups of defence-related DEGs for downstream qRT-PCR analysis. Cf-9, the gene responsible for recognizing fungal avirulence protein activity was found inexpressible in susceptible plant. However, this gene exhibited promising expression in resistant plant. Inactivation of Cf-9 could be the factor that causes susceptible plant fail in recognition of F. solani and subsequently delay activation of adaptive response to fungal invasion. This vital study advance the understanding of pepper plant defence in response to F. solani and aid in identifying potential solution to manage slow decline disease in black pepper cultivation.


Subject(s)
Fusarium/physiology , Host-Pathogen Interactions/genetics , Piper nigrum/microbiology , Disease Resistance/genetics , Disease Resistance/immunology , Fusarium/pathogenicity , Gene Expression Profiling , Gene Expression Regulation, Plant , Genes, Plant/genetics , Malaysia , Piper/genetics , Piper/immunology , Piper/microbiology , Piper nigrum/genetics , Piper nigrum/immunology , Plant Diseases/genetics , Plant Diseases/immunology , Plant Diseases/microbiology
5.
Appl Environ Microbiol ; 84(13)2018 07 01.
Article in English | MEDLINE | ID: mdl-29678917

ABSTRACT

Recombination is a major driver of evolution in bacterial populations, because it can spread and combine independently evolved beneficial mutations. Recombinant lineages of bacterial pathogens of plants are typically associated with the colonization of novel hosts and the emergence of new diseases. Here we show that recombination between evolutionarily and phenotypically distinct plant-pathogenic lineages generated recombinant lineages with unique combinations of pathogenicity and virulence factors. Xanthomonas euvesicatoria and Xanthomonas perforans are two closely related lineages causing bacterial spot disease on tomato and pepper worldwide. We sequenced the genomes of atypical strains collected from tomato in Nigeria and observed recombination in the type III secretion system and effector genes, which showed alleles from both X. euvesicatoria and X. perforans Wider horizontal gene transfer was indicated by the fact that the lipopolysaccharide cluster of one strain was most similar to that of a distantly related Xanthomonas pathogen of barley. This strain and others have experienced extensive genomewide homologous recombination, and both species exhibited dynamic open pangenomes. Variation in effector gene repertoires within and between species must be taken into consideration when one is breeding tomatoes for disease resistance. Resistance breeding strategies that target specific effectors must consider possibly dramatic variation in bacterial spot populations across global production regions, as illustrated by the recombinant strains observed here.IMPORTANCE The pathogens that cause bacterial spot of tomato and pepper are extensively studied models of plant-microbe interactions and cause problematic disease worldwide. Atypical bacterial spot strains collected from tomato in Nigeria, and other strains from Italy, India, and Florida, showed evidence of genomewide recombination that generated genetically distinct pathogenic lineages. The strains from Nigeria and Italy were found to have a mix of type III secretion system genes from X. perforans and X. euvesicatoria, as well as effectors from Xanthomonas gardneri These genes and effectors are important in the establishment of disease, and effectors are common targets of resistance breeding. Our findings point to global diversity in the genomes of bacterial spot pathogens, which is likely to affect the host-pathogen interaction and influence management decisions.


Subject(s)
Evolution, Molecular , Genome, Bacterial , Genomics , Recombination, Genetic , Xanthomonas/genetics , Bacterial Proteins/genetics , Base Sequence , Breeding , Florida , Gene Transfer, Horizontal , Homologous Recombination , Host-Pathogen Interactions , India , Italy , Solanum lycopersicum/microbiology , Nigeria , Phylogeny , Piper/microbiology , Plant Diseases/microbiology , Type III Secretion Systems/genetics , Virulence Factors/genetics , Xanthomonas/classification , Xanthomonas/pathogenicity
6.
Appl Biochem Biotechnol ; 184(3): 987-1008, 2018 Mar.
Article in English | MEDLINE | ID: mdl-28933036

ABSTRACT

The oomycetes, Phytophthora capsici, cause foot rot disease in black pepper. Piper colubrinum Link, a distant relative of cultivated black pepper, is highly resistant to this destructive pathogen. Identification of resistance (R) genes in P. colubrinum and the study of its expression profile during interaction with the pathogen can help in understanding the resistance mechanism involved. In the present study, 1289 R gene-related transcripts were mined from P. colubrinum transcriptome, clustered, and classified according to the conserved motifs and domains. Transcripts belonging to four major R gene classes were identified in P. colubrinum, but TIR-NBS-LRR-type R genes were absent. The relative expression of 12 selected R genes was studied using two virulent isolates of P. capsici, and these were found to be upregulated in the initial hours of plant pathogen interaction. The R genes studied were expressed even in aseptically maintained tissue-cultured plants and uninoculated greenhouse-grown plants at basal level suggesting that the plants are geared up with the R gene all the time and are under continuous surveillance for the pathogen and basal level of R gene expression do not require a pathogen trigger. ACT, ATUB, and EIF3E were identified as the most stable reference genes that can be used for real-time PCR study. The present study identified promising R genes in P. colubrinum which can be used in developing Phytophthora-resistant black pepper.


Subject(s)
Disease Resistance/physiology , Gene Expression Regulation, Plant , Phytophthora , Piper , Plant Diseases/microbiology , Plant Leaves , Transcriptome , Piper/genetics , Piper/metabolism , Piper/microbiology , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Leaves/microbiology
7.
J Nat Prod ; 80(7): 1955-1963, 2017 07 28.
Article in English | MEDLINE | ID: mdl-28704049

ABSTRACT

2,4-Diacetylphloroglucinol (DAPG) (1) is a phenolic polyketide produced by some plant-associated Pseudomonas species, with many biological activities and ecological functions. Here, we aimed at reconstructing the natural history of DAPG using phylogenomics focused at its biosynthetic gene cluster or phl genes. In addition to around 1500 publically available genomes, we obtained and analyzed the sequences of nine novel Pseudomonas endophytes isolated from the antidiabetic medicinal plant Piper auritum. We found that 29 organisms belonging to six Pseudomonas species contain the phl genes at different frequencies depending on the species. The evolution of the phl genes was then reconstructed, leading to at least two clades postulated to correlate with the known chemical diversity surrounding DAPG biosynthesis. Moreover, two of the newly obtained Pseudomonas endophytes with high antiglycation activity were shown to exert their inhibitory activity against the formation of advanced glycation end-products via DAPG and related congeners. Its isomer, 5-hydroxyferulic acid (2), detected during bioactivity-guided fractionation, together with other DAPG congeners, were found to enhance the detected inhibitory activity. This report provides evidence of a link between the evolution and chemical diversity of DAPG and congeners.


Subject(s)
Endophytes/chemistry , Phloroglucinol/analogs & derivatives , Piper/microbiology , Plants, Medicinal/microbiology , Polyketides/isolation & purification , Polyketides/pharmacology , Pseudomonas/chemistry , Coumaric Acids/chemistry , Coumaric Acids/isolation & purification , Mexico , Molecular Structure , Multigene Family , Phloroglucinol/chemistry , Phloroglucinol/isolation & purification , Phloroglucinol/pharmacology , Piper/genetics , Plant Components, Aerial/chemistry , Plants, Medicinal/genetics , Polyketides/chemistry , Stereoisomerism
8.
Int J Biol Macromol ; 94(Pt A): 431-437, 2017 Jan.
Article in English | MEDLINE | ID: mdl-27765569

ABSTRACT

This study reports the characterization and antiproliferative activity of exopolysaccharides (EPS) produced by submerged cultures of the endophytes Diaporthe sp. JF766998 and Diaporthe sp. JF767007 isolated from the medicinal plant Piper hispidum Sw. Both strains secreted a crude EPS that, upon size exclusion chromatography, showed to contain a heteropolysaccharide (galactose, glucose and mannose) and a high-molecular weight glucan. Data from methylation analysis, FTIR and NMR spectroscopy (1H, COSY, TOCSY and HSQC-DEPT) indicated that the purified glucan consisted of a main chain of glucopyranosyl ß-(1→3) linkages substituted at O-6 by glucosyl residues. According to MTT assay, some treatments of both ß-glucans have antiproliferative activity against human breast carcinoma (MCF-7) and hepatocellular carcinoma (HepG2-C3A) cells after 24 and 48h of treatment, exhibiting a degree of inhibition ratio that reached the highest values at 400µg/mL: 58.0% (24h) and 74.6% (48h) for MCF-7 cells, and 61.0% (24h) and 83.3% (48h) for HepG2-C3A cells. These results represent the first reports on the characterization and antiproliferative effect of ß-glucans from Diaporthe species and also expand the knowledge about bioactive polysaccharides from endophytic sources.


Subject(s)
Antineoplastic Agents/chemistry , Fungal Polysaccharides/chemistry , Antineoplastic Agents/isolation & purification , Antineoplastic Agents/pharmacology , Ascomycota/chemistry , Carbohydrate Conformation , Cell Proliferation/drug effects , Drug Screening Assays, Antitumor , Endophytes/chemistry , Fungal Polysaccharides/isolation & purification , Fungal Polysaccharides/pharmacology , Hep G2 Cells , Humans , Inhibitory Concentration 50 , MCF-7 Cells , Piper/microbiology
9.
Braz J Microbiol ; 46(2): 359-66, 2015 Jun.
Article in English | MEDLINE | ID: mdl-26273250

ABSTRACT

Endophytes are being considered for use in biological control, and the enzymes they secrete might facilitate their initial colonization of internal plant tissues and direct interactions with microbial pathogens. Microbial proteases are also biotechnologically important products employed in bioremediation processes, cosmetics, and the pharmaceutical, photographic and food industries. In the present study, we evaluated antagonism and competitive interactions between 98 fungal endophytes and Alternaria alternata, Colletotrichum sp., Phyllosticta citricarpa and Moniliophthora perniciosa. We also examined the proteolytic activities of endophytes grown in liquid medium and conducted cup plate assays. The results showed that certain strains in the assemblage of P. hispidum endophytes are important sources of antifungal properties, primarily Lasiodiplodia theobromae JF766989, which reduced phytopathogen growth by approximately 54 to 65%. We detected 28 endophytes producing enzymatic halos of up to 16.40 mm in diameter. The results obtained in the present study highlight the proteolytic activity of the endophytes Phoma herbarum JF766995 and Schizophyllum commune JF766994, which presented the highest enzymatic halo diameters under at least one culture condition tested. The increased activities of certain isolates in the presence of rice or soy flour as a substrate (with halos up to 17.67 mm in diameter) suggests that these endophytes have the potential to produce enzymes using agricultural wastes.


Subject(s)
Antifungal Agents/metabolism , Endophytes/isolation & purification , Endophytes/metabolism , Fungi/isolation & purification , Fungi/metabolism , Peptide Hydrolases/metabolism , Piper/microbiology , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Ribosomal Spacer/chemistry , DNA, Ribosomal Spacer/genetics , Fungi/classification , Fungi/drug effects , Microbiological Techniques , Molecular Sequence Data , Sequence Analysis, DNA
10.
Genet Mol Res ; 14(3): 7567-77, 2015 Jul 06.
Article in English | MEDLINE | ID: mdl-26214435

ABSTRACT

Endophytic bacteria have been found to colonize internal tissues in many different plants, where they can have several beneficial effects, including defense against pathogens. In this study, we aimed to identify endophytic bacteria associated with roots of the tropical piperaceae Piper tuberculatum, which is known for its resistance to infection by Fusarium solani f. sp piperis, the causal agent of black pepper (Piper nigrum) root rot disease in the Amazon region. Based on 16S rRNA gene sequence analysis, we isolated endophytes belonging to 13 genera: Bacillus, Paenibacillus, Pseudomonas, Enterobacter, Rhizobium, Sinorhizobium, Agrobacterium, Ralstonia, Serratia, Cupriavidus, Mitsuaria, Pantoea, and Staphylococcus. The results showed that 56.52% of isolates were associated with the phylum Proteobacteria, which comprised α, ß, and γ classes. Other bacteria were related to the phylum Firmicutes, including Bacillus, which was the most abundant genus among all isolates. Antagonistic assays revealed that Pt12 and Pt13 isolates, identified as Pseudomonas putida and Pseudomonas sp, respectively, were able to inhibit F. solani f. sp piperis growth in vitro. We describe, for the first time, the molecular identification of 23 endophytic bacteria from P. tuberculatum, among which two Pseudomonas species have the potential to control the pathogen responsible for root rot disease in black pepper in the Amazon region.


Subject(s)
Endophytes/genetics , Fusarium/genetics , Fusarium/isolation & purification , Piper/microbiology , Plant Diseases/microbiology , Plant Roots/microbiology , DNA, Ribosomal/genetics , Firmicutes/physiology , Fusarium/growth & development , Microbial Sensitivity Tests , Molecular Sequence Data , Phylogeny , Plant Diseases/genetics , Proteobacteria/physiology , Pseudomonas/physiology
11.
Phytochemistry ; 117: 98-106, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26070141

ABSTRACT

Quorum sensing (QS), or bacterial cell-to-cell communication, is a key process for bacterial colonization of substrata through biofilm formation, infections, and production of virulence factors. In an ongoing investigation of bioactive secondary metabolites from Piper species, four new flavonoids (1-4), along with five known ones (5-9) were isolated from the leaves of Piper delineatum. Their stereostructures were established by spectroscopic and spectrometric methods, including 1D and 2D NMR experiments, and comparison with data reported in the literature. The compounds were screened for their ability to interfere with QS signaling in the bacterial model Vibrio harveyi. Four compounds from this series (2, 3, 6, and 7) exhibited remarkable activity in the micromolar range, being compounds 3 and 7 particularly attractive since they did not affect bacterial growth. The results suggest that these flavonoids disrupt QS-mediated bioluminescence by interaction with elements downstream LuxO in the QS circuit of V. harveyi, and also, they exhibited a strong dose-dependent inhibition of biofilm formation. The present findings shed light on the QS inhibition mechanisms of flavonoids, underlining their potential applications.


Subject(s)
Flavonoids/isolation & purification , Flavonoids/pharmacology , Piper/chemistry , Quorum Sensing , Vibrio/physiology , Biofilms/drug effects , Flavonoids/chemistry , Molecular Structure , Nuclear Magnetic Resonance, Biomolecular , Peru , Phenotype , Piper/microbiology , Plant Leaves/chemistry , Vibrio/metabolism
12.
Braz. j. microbiol ; 46(2): 359-366, Apr-Jun/2015. tab, graf
Article in English | LILACS | ID: lil-749714

ABSTRACT

Endophytes are being considered for use in biological control, and the enzymes they secrete might facilitate their initial colonization of internal plant tissues and direct interactions with microbial pathogens. Microbial proteases are also biotechnologically important products employed in bioremediation processes, cosmetics, and the pharmaceutical, photographic and food industries. In the present study, we evaluated antagonism and competitive interactions between 98 fungal endophytes and Alternaria alternata, Colletotrichum sp., Phyllosticta citricarpa and Moniliophthora perniciosa. We also examined the proteolytic activities of endophytes grown in liquid medium and conducted cup plate assays. The results showed that certain strains in the assemblage of P. hispidum endophytes are important sources of antifungal properties, primarily Lasiodiplodia theobromae JF766989, which reduced phytopathogen growth by approximately 54 to 65%. We detected 28 endophytes producing enzymatic halos of up to 16.40 mm in diameter. The results obtained in the present study highlight the proteolytic activity of the endophytes Phoma herbarum JF766995 and Schizophyllum commune JF766994, which presented the highest enzymatic halo diameters under at least one culture condition tested. The increased activities of certain isolates in the presence of rice or soy flour as a substrate (with halos up to 17.67 mm in diameter) suggests that these endophytes have the potential to produce enzymes using agricultural wastes.


Subject(s)
Antifungal Agents/metabolism , Endophytes/isolation & purification , Endophytes/metabolism , Fungi/isolation & purification , Fungi/metabolism , Peptide Hydrolases/metabolism , Piper/microbiology , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Ribosomal Spacer/chemistry , DNA, Ribosomal Spacer/genetics , Fungi/classification , Fungi/drug effects , Microbiological Techniques , Molecular Sequence Data , Sequence Analysis, DNA
13.
Sci Rep ; 4: 4300, 2014 Mar 06.
Article in English | MEDLINE | ID: mdl-24599183

ABSTRACT

Entomopathogenic bacteria Xenorhabdus spp. produce secondary metabolites with potential antimicrobial activity for use in agricultural productions. This study evaluated the inhibitory effect of X. nematophila TB culture on plant pathogens Botrytis cinerea and Phytophthora capsici. The cell-free filtrate of TB culture showed strong inhibitory effects (>90%) on mycelial growth of both pathogens. The methanol-extracted bioactive compounds (methanol extract) of TB culture also had strong inhibitory effects on mycelial growth and spore germinations of both pathogens. The methanol extract (1000 µg/mL) and cell-free filtrate both showed strong therapeutic and protective effects (>70%) on grey mold both in detached tomato fruits and plants, and leaf scorch in pepper plants. This study demonstrates X. nematophila TB produces antimicrobial metabolites of strong activity on plant pathogens, with great potential for controlling tomato grey mold and pepper leaf scorch and being used in integrated disease control to reduce chemical application.


Subject(s)
Antibiosis , Botrytis , Phytophthora , Plant Diseases/microbiology , Xenorhabdus , Botrytis/growth & development , Solanum lycopersicum/microbiology , Phenotype , Phytophthora/growth & development , Piper/microbiology , Spores, Fungal , Xenorhabdus/chemistry , Xenorhabdus/growth & development
14.
PLoS One ; 9(12): e115052, 2014.
Article in English | MEDLINE | ID: mdl-25551554

ABSTRACT

BACKGROUND: Intercropping systems could increase crop diversity and avoid vulnerability to biotic stresses. Most studies have shown that intercropping can provide relief to crops against wind-dispersed pathogens. However, there was limited data on how the practice of intercropping help crops against soil-borne Phytophthora disease. PRINCIPAL FINDINGS: Compared to pepper monoculture, a large scale intercropping study of maize grown between pepper rows reduced disease levels of the soil-borne pepper Phytophthora blight. These reduced disease levels of Phytophthora in the intercropping system were correlated with the ability of maize plants to form a "root wall" that restricted the movement of Phytophthora capsici across rows. Experimentally, it was found that maize roots attracted the zoospores of P. capsici and then inhibited their growth. When maize plants were grown in close proximity to each other, the roots produced and secreted larger quantities of 2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one (DIMBOA) and 6-methoxy-2-benzoxazolinone (MBOA). Furthermore, MBOA, benzothiazole (BZO), and 2-(methylthio)-benzothiazole (MBZO) were identified in root exudates of maize and showed antimicrobial activity against P. capsici. CONCLUSIONS: Maize could form a "root wall" to restrict the spread of P. capsici across rows in maize and pepper intercropping systems. Antimicrobe compounds secreted by maize root were one of the factors that resulted in the inhibition of P. capsici. These results provide new insights into plant-plant-microbe mechanisms involved in intercropping systems.


Subject(s)
Agriculture/methods , Host-Parasite Interactions , Piper/growth & development , Piper/parasitology , Plant Diseases/prevention & control , Plant Diseases/parasitology , Soil/parasitology , Zea mays/growth & development , Environment, Controlled , Phytophthora/drug effects , Phytophthora/physiology , Piper/microbiology , Plant Diseases/microbiology , Plant Extracts/pharmacology , Plant Roots/chemistry , Plant Roots/microbiology , Plant Roots/parasitology , Rhizosphere , Soil Microbiology , Zea mays/chemistry
15.
Chem Commun (Camb) ; 49(69): 7641-3, 2013 Sep 07.
Article in English | MEDLINE | ID: mdl-23872808

ABSTRACT

Si-enterobactin (2a), a hexacoordinated complex of the siderophore enterobactin (2b) with silicon as the central atom, was isolated from an endophytic Streptomyces sp. occurring in Piper guinensis roots. The structure and absolute configuration were determined from NMR and MS data, and by X-ray diffraction. The orientation of the molecule along the pseudo-3-fold axis shows that the coordination environment of the silicon atom complexed with three bidentate ligands is Δ. We assume that 2a or related complexes may be involved in the transport of silicon in plants, diatoms, or other silicon-dependent organisms.


Subject(s)
Enterobactin/metabolism , Silicon/metabolism , Streptomyces/metabolism , Biological Transport , Crystallography, X-Ray , Enterobactin/chemistry , Ligands , Molecular Conformation , Piper/microbiology , Plant Roots/microbiology , Silicon/chemistry
16.
Mol Biotechnol ; 52(3): 251-61, 2012 Nov.
Article in English | MEDLINE | ID: mdl-22207456

ABSTRACT

Osmotin, a pathogenesis-related antifungal protein, is relevant in induced plant immunity and belongs to the thaumatin-like group of proteins (TLPs). This article describes comparative structural and functional analysis of the two osmotin isoforms cloned from Phytophthora-resistant wild Piper colubrinum. The two isoforms differ mainly by an internal deletion of 50 amino acid residues which separates them into two size categories (16.4 kDa-PcOSM1 and 21.5 kDa-PcOSM2) with pI values 5.6 and 8.3, respectively. Recombinant proteins were expressed in E. coli and antifungal activity assays of the purified proteins demonstrated significant inhibitory activity of the larger osmotin isoform (PcOSM2) on Phytophthora capsici and Fusarium oxysporum, and a markedly reduced antifungal potential of the smaller isoform (PcOSM1). Homology modelling of the proteins indicated structural alterations in their three-dimensional architecture. Tertiary structure of PcOSM2 conformed to the known structure of osmotin, with domain I comprising of 12 ß-sheets, an α-helical domain II and a domain III composed of 2 ß-sheets. PcOSM1 (smaller isoform) exhibited a distorted, indistinguishable domain III and loss of 4 ß-sheets in domain I. Interestingly, an interdomain acidic cleft between domains I and II, containing an optimally placed endoglucanase catalytic pair composed of Glu-Asp residues, which is characteristic of antifungal PR5 proteins, was present in both isoforms. It is well accepted that the presence of an acidic cleft correlates with antifungal activity due to the presence of endoglucanase catalytic property, and hence the present observation of significantly reduced antifungal capacity of PcOSM1 despite the presence of a strong acidic cleft, is suggestive of the possible roles played by other structural features like domain I or/and III, in deciding the antifungal potential of osmotin.


Subject(s)
Antifungal Agents/chemistry , Computational Biology , Piper/chemistry , Plant Proteins/chemistry , Amino Acid Sequence , Dipeptides/chemistry , Escherichia coli/genetics , Escherichia coli/metabolism , Fusarium/drug effects , Molecular Sequence Data , Phytophthora/drug effects , Piper/genetics , Piper/microbiology , Plant Immunity , Plant Proteins/genetics , Protein Isoforms/chemistry , Protein Structure, Tertiary , Recombinant Proteins/chemistry , Sequence Analysis, DNA , Structure-Activity Relationship
17.
J Antibiot (Tokyo) ; 64(6): 427-31, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21505472

ABSTRACT

The endophytic fungus Periconia sp. produces piperine (5-(3, 4-methylenedioxyphenyl)-1-piperidinopent-2, 4-dien-1-one) under liquid culture. This is the first report of the alternative source for this chemical other than its host, Piper longum. The highly functionalized fungus-derived piperine exhibits strong antimycobacterial activity against Mycobacterium tuberculosis and M. smegmetis with minimum inhibitory concentrations of 1.74 and 2.62 µg ml(-1), respectively. The compound was crystallized and the structure was elucidated by single-crystal X-ray crystallography. This finding is of significance as piperine is a potential cancer preventative agent. It is reaffirmed by this report that important pharmaceuticals can be produced by endophytic microbes, and these molecules appear to be mimetic to their host origin. Therefore, we can enhance the bioactive principles of medicinal plants by isolating and identifying the endophytes, thereby showing the importance of preserving the biodiversity of these plants.


Subject(s)
Alkaloids/pharmacology , Anti-Bacterial Agents/pharmacology , Ascomycota/metabolism , Benzodioxoles/pharmacology , Piper/microbiology , Piperidines/pharmacology , Polyunsaturated Alkamides/pharmacology , Alkaloids/chemistry , Alkaloids/isolation & purification , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/isolation & purification , Ascomycota/isolation & purification , Benzodioxoles/chemistry , Benzodioxoles/isolation & purification , Crystallization , Crystallography, X-Ray , Culture Media , Microbial Sensitivity Tests , Mycobacterium smegmatis/drug effects , Mycobacterium tuberculosis/drug effects , Piperidines/chemistry , Piperidines/isolation & purification , Polyunsaturated Alkamides/chemistry , Polyunsaturated Alkamides/isolation & purification
18.
J Nat Prod ; 74(1): 79-81, 2011 Jan 28.
Article in English | MEDLINE | ID: mdl-21174408

ABSTRACT

Five known isocoumarins, monocerin (1), derivative 2, and fusarentin derivatives 3-5, and a new phthalide (6) were isolated from the endophytic fungus Colletotrichum sp. 2 selectively exhibited cytotoxic activity toward the HepG2 cell line. Compounds 2 and 4 scavenged 2,2-diphenyl-1-picrylhydrazyl (DPPH) free radicals (IC(50) values of 23.4 and 16.4 µM, respectively) and inhibited superoxide anion radical formation (IC(50) values of 52.6 and 4.3 µM, respectively). The C-7 hydroxyl group in 2 and 4 might be important for radical scavenging activities. Isocoumarins 1-3 and phthalide 6 showed potent antioxidant activity.


Subject(s)
Antineoplastic Agents/isolation & purification , Antineoplastic Agents/pharmacology , Antioxidants/isolation & purification , Antioxidants/pharmacology , Aromatase Inhibitors/isolation & purification , Aromatase Inhibitors/pharmacology , Benzofurans/isolation & purification , Benzofurans/pharmacology , Colletotrichum/chemistry , Isocoumarins/isolation & purification , Isocoumarins/pharmacology , Lactones/isolation & purification , Lactones/pharmacology , Antineoplastic Agents/chemistry , Antioxidants/chemistry , Aromatase Inhibitors/chemistry , Benzofurans/chemistry , Biphenyl Compounds/pharmacology , Drug Screening Assays, Antitumor , Free Radical Scavengers/chemistry , Free Radical Scavengers/pharmacology , HL-60 Cells , Hep G2 Cells , Humans , Isocoumarins/chemistry , Lactones/chemistry , Molecular Structure , Picrates/pharmacology , Piper/microbiology , Structure-Activity Relationship , Thailand
19.
Can J Microbiol ; 53(1): 63-74, 2007 Jan.
Article in English | MEDLINE | ID: mdl-17496951

ABSTRACT

Bacterial contamination is a serious problem that causes severe loss of in vitro grown cultures of a number of plants. This problem becomes even more acute if the bacterial contamination is of endophytic origin. In such cases, identification and characterization of the contaminants is essential for achieving specific control of the contaminants through selective use of antibiotic agents, especially if the routinely used contamination control methods practiced elsewhere in tissue culture studies are ineffective. Such is the case with the bacterial contamination observed in the present study. The five endophytic bacteria associated with Piper nigrum and Piper colubrinum, four endophytic bacteria associated with Taxus baccata subsp. wallichiana, two endophytic bacteria associated with Withania somnifera, and two bacteria common to all these plant species were isolated and characterized based on morphological and biochemical tests. Their taxonomic positions based on similarity indices were determined. A control strategy against these bacteria has been developed based on bacteriostatic or bactericidal actions of 12 antibiotics at three different concentrations by solid and liquid antibiogramme assays.


Subject(s)
Piper/microbiology , Plant Diseases/microbiology , Taxus/microbiology , Withania/microbiology , Anti-Bacterial Agents/pharmacology , Bacteria, Aerobic/classification , Bacteria, Aerobic/drug effects , Bacteria, Anaerobic/classification , Bacteria, Anaerobic/drug effects , Culture Media , In Vitro Techniques , Piper/growth & development , Sterilization/methods , Taxus/growth & development , Withania/growth & development
20.
Ars pharm ; 48(4): 343-350, 2007. tab
Article in Es | IBECS | ID: ibc-64397

ABSTRACT

Piper cubeba L. (Piperaceae), conocida comúnmente como ‘cubeb’, es autóctona de Indonesia y también se encuentraen muchos otros países del sureste de Asia, así como en algunos países africanos.Esta planta se ha utilizado como un popular aditivo alimentario y, en la medicina tradicional, para tratar diversasdolencias, especialmente infecciones bacterianas. Para evaluar la actividad antioxidante (barrido de radicales libres)y la actividad antibacteriana de los extractos de n-hexano, diclorometano (DCM) y metanol (MeOH) de las bayassecas (fruto) de esta planta, se llevó a cabo un ensayo 2,2-difenil-1-picrilhidracil (DPPH) y un ensayo antimicrobianobasado en microtitulación que incorporaba resazurina como indicador del crecimiento celular, respectivamente. Aunquetodos los extractos mostraron actividad antioxidante en el ensayo cualitativo, la actividad antioxidante más destacadase observó con el extracto de MeOH en el ensayo cuantitativo con un valor de RC50 de 2,71 x 10-1 mg/mL.La potencia antioxidante del extracto de DCM fue aproximadamente 3 veces menor (RC50 = 6,50 x 10-1 mg/mL)que la del extracto de MeOH.Ninguno de los extractos mostró propiedades antibacterianas frente a Bacillus subtilis, Escherichia coli y Escherichiacoli resistente a la ampicilina. Aunque ambos extractos, el n-hexano y el DCM, inhibieron el crecimiento de Bacilluscereus, Pseudomonas aeruginosa y Staphylococcus aureus, el extracto de MeOH sólo mostró actividad frente a B.cereus y P. aeruginosa. El extracto de n-hexano fue el que mostró mayor potencia antibacteriana frente a B. cereus,con un valor de concentración inhibitoria mínima (CIM) de 1,56 mg/mL. Se observó que todas las actividades antibacterianasde los extractos resultaron más bacteriostáticas que bactericidas


Piper cubeba L. (Piperaceae), commonly known as ‘cubeb’, is native to Indonesia, and also found in many other countriesof the South-East Asia, and in some African countries. This plant has been used as a popular food additive, andin folklore medicine to treat various ailments, particularly bacterial infections. The n-hexane, dichloromethane (DCM)and methanol (MeOH) extracts of the dried berries (fruit) of this plant were assessed for their antioxidant (free radicalscavenging) and antibacterial activities using the 2,2-diphenyl-1-picrylhydrazyl (DPPH) assay and the micro titre basedantimicrobial assay incorporating resazurin as an indicator of cell growth, respectively. While all extracts showed antioxidantactivity in the qualitative assay, the most prominent antioxidant activity was observed with the MeOH extract inthe quantitative assay with a RC50 value of 2.71 x 10-1 mg/mL. The antioxidant potency of the DCM extract was about3 fold less (RC50 = 6.50 x 10-1 mg/mL) than that of the MeOH extract. None of the extracts showed any antibacterialproperty against Bacillus subtilis, Escherichia coli, and ampicillin resistant Escherichia coli. While both the n-hexaneand the DCM extracts inhibited the growth of Bacillus cereus, Pseudomonas aeruginosa and Staphylococcus aureus, theMeOH extract was active only against B. cereus and P. aeruginosa. The most potent antibacterial activity was displayedby the n-hexane extract against B. cereus with an MIC value of 1.56 mg/mL. All antibacterial activities of the extractswere found to be bacteriostatic rather than bactericidal (AU)


Subject(s)
Antioxidants/analysis , Antioxidants/pharmacology , Antioxidants/pharmacokinetics , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/pharmacokinetics , Piperaceae/chemistry , Piper/chemistry , Plants, Medicinal/chemistry , Plant Extracts/chemistry , Plant Extracts/chemical synthesis , Piper , Anti-Bacterial Agents/analysis , Plant Extracts/pharmacology , Piper/microbiology , Bacterial Infections/drug therapy , Plant Extracts/analysis , Plant Extracts/pharmacokinetics , Plant Extracts/therapeutic use , Medicine, Traditional
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