Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 27
Filter
Add more filters










Publication year range
1.
Molecules ; 26(17)2021 Aug 30.
Article in English | MEDLINE | ID: mdl-34500705

ABSTRACT

Identification of the presence of pathogenic oomycetes in infected plant material proved possible using an electronic nose, giving hope for a tool to assist nurseries and quarantine services. Previously, species of Phytophthora plurivora and Pythium intermedium have been successfully distinguished in germinated acorns of English oak Quercus robur L. Chemical compound analyses performed by HS-SPME/GC-MS (Headspace Solid-Phase Microextraction/Gas Chromatography-Mass Spectrometry) revealed the presence of volatile antifungal molecules produced by oak seedlings belonging to terpenes and alkanes. Compounds characteristic only of Phytophthora plurivora or Pythium intermedium were also found. Methylcarveol occurred when germinated acorns were infected with Pythium, while neophytadiene (isomer 2 and 3) occurred only when infected with Phytophthora. Moreover, isopentanol was found in acorns infected with Phytophthora, while in control, isopentyl vinyl ether was not observed anywhere else. Among the numerous volatile compounds, isopentanol only occurred in acorns infected with Phytophthora and methylcarveol in acorns infected with Pythium.


Subject(s)
Phytophthora/chemistry , Pythium/chemistry , Quercus/chemistry , Volatile Organic Compounds/chemistry , Gas Chromatography-Mass Spectrometry , Solid Phase Microextraction
2.
Toxins (Basel) ; 13(9)2021 08 27.
Article in English | MEDLINE | ID: mdl-34564602

ABSTRACT

The aim of this study was to evaluate the interactions between wheat plant (spikelets and straws), a strain of mycotoxigenic pathogen Fusarium graminearum and commercial biocontrol agents (BCAs). The ability of BCAs to colonize plant tissue and inhibit the pathogen or its toxin production was observed throughout two phases of the life cycle of pathogens in natural conditions (colonization and survival). All evaluated BCAs showed effective reduction capacities of pathogenic traits. During establishment and the expansion stage, BCAs provoked an external growth reduction of F. graminearum (77-93% over the whole kinetic studied) and mycotoxin production (98-100% over the whole kinetic studied). Internal growth of pathogen was assessed with digital droplet polymerase chain reaction (ddPCR) and showed a very strong reduction in the colonization of the internal tissues of the spikelet due to the presence of BCAs (98% on average). During the survival stage, BCAs prevented the formation of conservation perithecia of the pathogen on wheat straw (between 88 and 98% of perithecia number reduction) and showed contrasting actions on the ascospores they contain, or perithecia production (-95% on average) during survival form. The mechanisms involved in these different interactions between F. graminearum and BCAs on plant matrices at different stages of the pathogen's life cycle were based on a reduction of toxins, nutritional and/or spatial competition, or production of anti-microbial compounds.


Subject(s)
Biological Control Agents/pharmacology , Fusarium/pathogenicity , Host-Pathogen Interactions/drug effects , Mycotoxins/biosynthesis , Mycotoxins/toxicity , Plant Diseases/prevention & control , Triticum/microbiology , Edible Grain/microbiology , Pythium/chemistry , Pythium/pathogenicity , Streptomyces/chemistry , Streptomyces/pathogenicity , Trichoderma/chemistry , Trichoderma/pathogenicity
3.
Food Chem ; 309: 125604, 2020 Mar 30.
Article in English | MEDLINE | ID: mdl-31689590

ABSTRACT

In this study, we extracted exopolysaccharides from Pythium arrhenomanes and purified them to obtain three polysaccharides (PEPS-1, PEPS-2, PEPS-3). The composition of these polysaccharides was determined. PEPS-2 and PEPS-3 showed outstanding antioxidant activities. PEPS-2 was chosen as a polysaccharide-based coating for strawberry fruit, and its effects on postharvest preservation of the fruit were determined. Strawberries coated with PEPS-2 exhibited significant delay in decay index and lower malondialdehyde, higher soluble solids content, anthocyanin content and vitamin C content, and greater DPPH radical-scavenging activity than uncoated control fruit. The developed method could be beneficial for improving the shelf-life of strawberries.


Subject(s)
Food Preservation/methods , Fragaria , Fruit , Polysaccharides/isolation & purification , Polysaccharides/pharmacology , Pythium/chemistry , Anthocyanins/analysis , Ascorbic Acid/analysis , Food Storage , Fragaria/chemistry , Fragaria/physiology , Fruit/chemistry , Fruit/physiology , Malondialdehyde/analysis , Polysaccharides/analysis
4.
Bioorg Chem ; 92: 103204, 2019 11.
Article in English | MEDLINE | ID: mdl-31472459

ABSTRACT

This report presents the whole-cell biotransformation of benzofuranyl-methyl ketone derivatives with the application of Polyversum antifungal agent containing Pythium oligandrum microorganism. Stereochemistry of the reduction of prochiral substrates was modified by the bioconversion conditions (concentration of reagents, a source of the carbon atom, biotransformation medium). In optimized conditions enantioselective process was noted. Secondary alcohols with excellent enantiomeric purity and high yields were obtained. The enantiomeric excess and conversion degree of 1-(benzofuran-2-yl)ethanol, 1-(7-ethylbenzofuran-2-yl)ethanol and 1-(3,7-dimethylbenzofuran-2-yl)ethanol were 99%/98.1%, 94%/94.4% and 99%/72.6%, respectively. In the presence of P. oligandrum, one of the enantiotopic hydrides of the dihydropyridine ring coenzyme is selectively transferred to a re side of the prochiral carbonyl group to give products with S configuration. This study demonstrates an inexpensive, eco-friendly approach in synthesis of optically pure benzofuran derivatives and can be an interesting alternative to organocatalysis. Furthermore, this method can be used in biotechnology processes due to its good chemical performance and a high degree of product isolation.


Subject(s)
Ketones/metabolism , Pythium/chemistry , Pythium/cytology , Antifungal Agents , Biotransformation , Humans , Ketones/chemistry , Molecular Structure , Pythium/metabolism , Stereoisomerism
5.
J Med Microbiol ; 68(4): 574-584, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30735118

ABSTRACT

PURPOSE: Pythiosis is an infection of humans and other animals caused by the fungal-like pathogen Pythium insidiosum. This pathogen causes life-threatening infection in the infected hosts. Culture, histopathology, serology and molecular tools are used to diagnose its infections. Successful management of pythiosis is directly linked to an early diagnosis. Thus, a rapid identification of putative cultures developing submerged sparsely septate hyphae is of extreme importance. However, few laboratories are familiar with the culture identification of this unique pathogen and its differential diagnosis with similar filamentous fungi. METHODOLOGY: We have evaluated the use of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF) on 53 isolates of P. insidiosum collected from cases of human and animal pythiosis in the USA and around the world. To assess the specificity of the approach, 18 pathogenic and saprotrophic filamentous fungal and fungal-like microbes were also tested. RESULTS: MALDI-TOF in-house spectra correctly identified the 53 P. insidiosum isolates (score range 1.93-2.51). MALDI-TOF based identification within P. insidiosum isolates showed protein spectra variation between geographical diverse isolates. A mass spectrometry approach was able to discriminate P. insidiosum from the 18 filamentous fungal and fungal-like microbes in this study, including four Pythium spp. and Phytopythium litorale plant pathogenic species. CONCLUSION: The data showed MALDI-TOF could be used for the accurate and rapid culture identification of P. insidiosum in the clinical laboratory.


Subject(s)
Pythiosis/diagnosis , Pythium/chemistry , Animals , Dog Diseases/diagnosis , Dog Diseases/epidemiology , Dog Diseases/microbiology , Dogs , Horse Diseases/diagnosis , Horse Diseases/epidemiology , Horse Diseases/microbiology , Horses , Humans , Phylogeny , Pythiosis/epidemiology , Pythium/isolation & purification , Sensitivity and Specificity , Sequence Analysis, DNA , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , United States/epidemiology
6.
Med Mycol ; 57(1): 92-100, 2019 Jan 01.
Article in English | MEDLINE | ID: mdl-29373751

ABSTRACT

Pythium insidiosum is the etiologic agent of pythiosis, a life-threatening disease that affects human and animals, has difficult diagnosis, and therapy. Studies on protein characterization of P. insidiosum are scarce, so we aimed to determine the protein profile of P. insidiosum by mass spectrometry and bioinformatics strategies targeting in proteins that may act as putative virulence factors. Therefore, an extraction protocol was standardized to obtain the total proteins of P. insidiosum. By the analysis of Image Master 2D Platinum software, it was found that 186 spots ranging between 12 and 89 KDa and isoelectric point from 4 to 7. By the analysis of 2D-SDS-PAGE it was possible to visualize and excise 103 spots, which were hydrolyzed with trypsin and submitted to mass spectrometry, resulting in the identification of 36 different proteins. Three of them were classified as proteins supposedly related to virulence factors due to its functions, such as glucan 1,3-beta glucosidase, Heat shock protein (Hsp) 70 and enolase. These results may contribute to a better understanding of the virulence factors of this medically important oomycete, as well as to subsidize new studies on diagnosis and therapeutic approaches.


Subject(s)
Fungal Proteins/metabolism , Proteomics , Pythiosis/microbiology , Pythium/chemistry , Pythium/pathogenicity , Virulence Factors/metabolism , Animals , Horses , Mass Spectrometry , Pythium/isolation & purification , Software
7.
Med Mycol ; 57(7): 807-812, 2019 Oct 01.
Article in English | MEDLINE | ID: mdl-30260397

ABSTRACT

The oomycetous pathogen Pythium insidiosum is the causative agent of pythiosis, a life-threatening disease that affects animals and humans. This infectious disease is difficult to treat, and early and accurate diagnosis is critical for effective treatment. In this sense, this study aimed to evaluate the intradermal (ID) injection of P. insidiosum protein antigens (PiPA) for the diagnosis and treatment of pythiosis using an experimental model. For diagnostic purposes, PiPA were injected by the ID route in the following groups of rabbits: (a) control; (b) previously immunized with PiPA injected by the subcutaneous (SC) route; and (c) infected with P. insidiosum zoospores. For treatment purposes, rabbits with pythiosis were also treated with PiPA by the ID or SC routes. Mean induration sizes were different at 24 h and 72 h readings when compared to the control group. Sensitivity of the protocol was 100% at 24 h and 80% at 72 h, with 100% specificity in both readings. PiPA treatment using ID or SC routes did not result in significant differences in lesion sizes and cure rates; however, serum levels of interferon-gamma were higher in SC route. This study demonstrates the applicability of PiPA ID for diagnosis and treatment of pythiosis in an experimental model.


Subject(s)
Antigens/administration & dosage , Pythiosis/diagnosis , Pythiosis/therapy , Pythium/chemistry , Animals , Antigens/immunology , Cytokines/blood , Disease Models, Animal , Injections, Intradermal , Interferon-gamma/blood , Pythium/immunology , Rabbits
8.
Can J Microbiol ; 63(5): 411-426, 2017 May.
Article in English | MEDLINE | ID: mdl-28178423

ABSTRACT

Disease suppressive composts have the potential to mitigate the risks associated with chemical pesticides. One of the main characteristics responsible for the suppressive nature of composts is their microbiological populations. To gain insight into the determinants responsible for their suppressive effects, we assayed composts to (i) isolate and identify beneficial antagonistic bacteria, (ii) quantify their antifungal and anti-oomycetal activities, (iii) extract inhibitory compounds produced by the bacteria, and (iv) identify antimicrobial lipopeptides produced by these bacteria. The antagonistic bacteria belonged to the genera Arthrobacter, Pseudomonas, Bacillus, Brevibacillus, Paenibacillus, and Rummeliibacillus and had the ability to antagonise the growth of Fusarium sambucinum, Verticillium dahliae, and (or) Pythium sulcatum. These bacteria produced antimicrobial compounds that affected the mycelial growth and (or) conidial germination of the pathogens. Mass spectrometry analyses showed the presence of various antimicrobial lipopeptides in Bacillus and Bacillus-related spp. extracts, demonstrating that they are responsible, at least in part, for the antagonistic activity of the bacteria. Results from this work provide greater insight into some of the biological, biochemical, and physiological determinants of suppressiveness in composts involved in the control of plant pathogens.


Subject(s)
Plant Diseases/microbiology , Plants/microbiology , Soil Microbiology , Anti-Bacterial Agents/pharmacology , Antifungal Agents/pharmacology , Bacillus/chemistry , Bacillus/physiology , Fusarium/chemistry , Fusarium/physiology , Germination , Lipopeptides/pharmacology , Pythium/chemistry , Pythium/physiology , Spores, Fungal , Verticillium/chemistry , Verticillium/physiology
9.
Carbohydr Polym ; 157: 719-727, 2017 Feb 10.
Article in English | MEDLINE | ID: mdl-27987983

ABSTRACT

Pythiosis is a life-threatening infectious disease caused by the pathogenic oomycete Pythium insidiosum. This study is the first to evaluate the P. insidiosum glucan content and its biological activities. The enzymatic quantification of the glucans in P. insidiosum mycelia showed that the ß-glucan content was 18.99%±3.59. The cell wall polysaccharide extract consisted of ∼81.7% carbohydrates (exclusively glucose) and ∼18.3% residual amino acids and peptides. The results from monosaccharide composition, methylation and 1D/2D NMR spectroscopy analyses indicated the presence of a highly branched (1,3)(1,6)-ß-d-glucan, with (1,6)-ß-d-glucopyranosil side-branching unit on average every 1-2 repeat units. In vitro, the ß-d-glucan extract could significantly promote spleen lymphocyte proliferation in human, equine and mouse cell cultures. BALB/c mice that were subcutaneously pre-immunized with three doses of 0.5, 2.5 and 5.0mg of ß-glucan/mouse, showed a significant increase in IL-2, IL-6, IL-10, TNF-α and IL-17A production compared to non-immunized mice. These results suggested that ß-d-glucan extract induces significant and specific Th17 cellular immune response and provided the theoretical basis for further experiments.


Subject(s)
Glucans/chemistry , Pythium/chemistry , Animals , Cells, Cultured , Cytokines/metabolism , Horses , Humans , Immunity, Cellular , Mice , Mice, Inbred BALB C , Monosaccharides , Polysaccharides , Spleen/cytology , Th17 Cells/drug effects
10.
Phytochemistry ; 122: 56-64, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26608666

ABSTRACT

Ginsenosides produced by ginseng (Panax quinquefolius L.) are mildly fungitoxic saponins; however, exposure of the ginseng root pathogen Pythium irregulare Buisman to ginsenosides enhances its growth in a dose dependent manner, leading to speculation that ginsenosides may function as chemoattractants and/or growth regulators in the context of the ginseng - P. irregulare pathosystem. In the present work, it was demonstrated that the treatment of ginseng plants with a relatively high dose of ginsenosides by dipping their roots into a solution of ginsenosides prior to planting results in delayed infection by P. irregulare in pot experiments, as monitored by non-invasive chlorophyll fluorescence imaging. In an attempt to determine whether this observation results from a protective effect of the ginsenosides, or from a modification of P. irregulare growth habit in response to ginsenosides present in the soil, standard in vitro disk diffusion assays were conducted. Here, exposure of P. irregulare to crude ginsenosides or pure ginsenoside Rb1, resulted in delayed hyphal progression, while enhancing aerial hyphae build-up around ginsenoside-treated disks. By contrast, assays with pure ginsenoside F2 resulted in clear zones of inhibition around treated disks. While it remains unclear whether ginsenosides act as chemoattractants for P. irregulare in vivo, the results here suggest that these saponins serve to alter the growth habit of this organism, both in vivo and in vitro.


Subject(s)
Chemotactic Factors/pharmacology , Ginsenosides/isolation & purification , Ginsenosides/pharmacology , Panax/chemistry , Pythium/chemistry , Chemotactic Factors/chemistry , Dose-Response Relationship, Drug , Ginsenosides/analysis , Ginsenosides/chemistry , Molecular Structure , Plant Roots/drug effects , Soil
11.
Wei Sheng Wu Xue Bao ; 56(7): 1159-67, 2016 Jul 04.
Article in Chinese | MEDLINE | ID: mdl-29733177

ABSTRACT

Objective: Biopesticides are safe and environment friendly. We evaluated the biocontrol effect of Pythium oligandrum broth (POB) and its toxicity to animals and plant growth. Methods: Animal, antagonist, pot, and field experiments with mice, Mycosphaerella melonis, and cucumber seedlings were carried out to study animal toxicity, control of gummy stem blight, plant growth, fruit yield and quality with POB produced from self-isolated P. oligandrum CQ2010. Results: Mouse showed normal weight, appearances, performances and no pathogenic changes in organs and tissues with a large amount of POB supplied by lavage. The inhibition rate of POB against M. melonis was 51.95%, similar to thiophanate methy (800 times dilution) but much higher than chlorothalonil (200 times dilution). Malondialdehyde concentration was reduced whereas activities of peroxidase and superoxide dismutase were stimulated in seedling leaves irrespective of POB supplied before and after pathogenic inoculation. POB also decreased the pathogenic incidence and disease index with relative control efficacy from 54.8% to 64.1%. Thus, POB could alleviate cell membrane damage caused by pathogenic microbes, stimulate physiological reactions related to disease defense, and increase disease-resistant abilities of plants. Moreover, POB increased chlorophyll content, root activity, and uptake of nitrogen, phosphorus and potassium, resulting in growth acceleration, fruit yield increment, and quality improvement. Conclusion: POB is safe to animals and could control gummy stem blight of cucumber seedlings, promote plant growth, increase fruit yield, and improve the qualities.


Subject(s)
Ascomycota/drug effects , Biological Control Agents/pharmacology , Cucumis sativus/growth & development , Plant Diseases/microbiology , Pythium/chemistry , Animals , Ascomycota/growth & development , Cucumis sativus/drug effects , Cucumis sativus/microbiology , Mice , Plant Stems/drug effects , Plant Stems/growth & development , Plant Stems/microbiology , Seedlings/drug effects , Seedlings/growth & development , Seedlings/microbiology
12.
Int J Biol Macromol ; 74: 278-82, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25524742

ABSTRACT

In vitro experiments were carried out to test the efficacy of GNP (ß-D-glucan nanoparticle prepared from mycelium of Pythium aphanidermatum) against rhizome rot disease of turmeric (Curcuma longa L.) caused by P. aphanidermatum. GNP (0.1%, w/v) was applied to rhizome prior to inoculation with P. aphanidermatum (0 h, 24 h). Cell death, activities of defense enzymes such as peroxidase, polyphenol oxidase, protease inhibitor and ß-1,3 glucanase were monitored. Prior application of GNP (24 h) to turmeric rhizome effectively controls P. aphanidermatum infection. The increase in defense enzyme activities occurred more rapidly and was enhanced in P. aphanidermatum infected rhizomes that were pre-treated with GNP. Pre-treatment also induced new isoforms of defense enzymes. Increased activities of defense enzymes suggest that they play a key role in restricting the development of disease symptoms in the rhizomes as evidenced by a reduction in cell death. The results demonstrated that GNP can be used as a potential agent for control of rhizome rot disease.


Subject(s)
Nanoparticles/chemistry , Pythium/chemistry , beta-Glucans/administration & dosage , beta-Glucans/chemistry , Catechol Oxidase/metabolism , Cell Death/drug effects , Curcuma/drug effects , Curcuma/metabolism , Curcuma/microbiology , Enzyme Activation/drug effects , Mycelium/chemistry , Peroxidase/metabolism , Plant Diseases/microbiology , Pythiosis/drug therapy , Pythiosis/microbiology
13.
Wei Sheng Wu Xue Bao ; 55(11): 1418-26, 2015 Nov 04.
Article in Chinese | MEDLINE | ID: mdl-26915223

ABSTRACT

OBJECTIVE: In order to develop a safe, nontoxic and efficient biological antistaling agent and to decrease the incidence of rot diseases caused by the Penicillium italicum and Penicillium digitatum in orange fruit storage. METHODS: the present experiment was carried out with Pythium oligandrum broth (POB) produced by our self-isolated strain (P. oligandrum CQ2010) to study the toxicity to animal. Thereafter, mycelium growth and spore germination of both P. digitatum and P. italicum and control effect of rot disease in orange storage were compared after treated by liquid culture medium (control), POB, prochloraz (PC) , and PC + POB. RESULTS: Gastric lavage with large amount POB did not influence mouse weight. The animals also showed no abnormality in appearance, behaviors and pathology changes in heart, liver, kidney, lung and intestine. POB decreased the hyphal growth by 70.24% - 93.74% and spore germination by 44.91% - 87.82% (24 h after POB addition) of these two pathogenic fungi. Disease incidence of orange fruit following P. italicum inoculation changed in the sequence: CK > POB > PC > PC + POB and the control efficacy behaved otherwise. In commercial simulation storage, the disease incidence of orange fruit caused by P. digitatum and P. italicum was above 50% of the total. The fruit rot rate was 26.40% (CK), 15.03% (POB), 16.61% (PC) and 4.21% (PC + POB). There were no significant differences in fruit quality under different treatments. CONCLUSION: POB was safe to animal and could decrease rot disease incidence caused by P. italicum and P. digitatum in orange storage whereby producing a positive interaction with prochloraz and controlling rot diseases caused by these two fungi.


Subject(s)
Citrus/microbiology , Culture Media/toxicity , Penicillium/drug effects , Plant Diseases/microbiology , Pythium/chemistry , Animals , Culture Media/metabolism , Fruit/microbiology , Mice , Penicillium/growth & development , Penicillium/physiology , Plant Diseases/prevention & control , Pythium/metabolism , Toxicity Tests
14.
J Basic Microbiol ; 51(2): 173-82, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21298678

ABSTRACT

The removal of Cr(VI) from aqueous solutions by live and pretreated fungal biomass of Pythium sp was investigated in a batch mode. The influence of biomass dose, solution pH, initial metal ion concentration, temperature and pretreatment of biomass on biosorption efficiency was studied. The acid pretreated biomass adsorbed 1.7 times more hexavalent chromium in comparison to untreated biomass. The chromium removal rate increased with decrease in pH and increase in Cr(VI) concentration, biomass dose and temperature. The adsorption data was described well by Freundlich isotherm model. Evaluation of biosorption mechanism using infrared spectroscopy showed the involvement of positively charged amino groups in Cr(VI) biosorption. The biosorption of Cr(VI) by Pythium sp. followed second order kinetics, the biosorption process was found to be spontaneous and endothermic with high affinity of biomass for Cr(VI).


Subject(s)
Biomass , Chromium/metabolism , Pythium/metabolism , Water Pollutants, Chemical/metabolism , Adsorption , Chromium/chemistry , Hydrogen-Ion Concentration , Kinetics , Pythium/chemistry , Temperature , Thermodynamics , Water Pollutants, Chemical/chemistry
15.
Fungal Biol ; 115(2): 157-68, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21315313

ABSTRACT

Pythium vexans fits into the internal transcribed spacer (ITS) clade K sensu Lévesque & De Cock (2004). Within clade K, P. vexans forms a distinct clade containing two enigmatic species, Pythium indigoferae and Pythium cucurbitacearum of which no ex-type strains are available. In South Africa, as well as in other regions of the world, P. vexans isolates are known to be heterogeneous in their ITS sequences and may consist of more than one species. This study aimed to investigate the diversity of South African P. vexans isolates, mainly from grapevines, but also citrus and apple using (i) phylogenetic analyses of the ITS, cytochrome c oxidase (cox) I, cox II, and ß-tubulin regions and (ii) seven biometric oogonial parameters. Each of the phylogenies clustered P. vexans isolates into a single well-supported clade, distinct from other clade K species. The ß-tubulin region was phylogenetically uninformative regarding the P. vexans group. The ITS phylogeny and combined cox I and II phylogenies, although each revealing several P. vexans subclades, were incongruent. One of the most striking incongruences was the presence of one cox subclade that contained two distinct ITS subclades (Ib and IV). Three groups (A-C) were subjectively identified among South African P. vexans isolates using (i) phylogenetic clades (ITS and cox), (ii) univariate analysis of oogonial diameters, and (iii) multivariate analyses of biometric oogonial parameters. Group A is considered to be P. vexans s. str. since it contained the P. vexans CBS reference strain from Van der Plaats-Niterink (1981). This group had significantly smaller oogonial diameters than group B and C isolates. Group B contained the isolates from ITS subclades Ib and IV, which formed a single cox subclade. The ITS subclade IV isolates were all sexually sterile or produced mainly abortive oospores, as opposed to the sexually fertile subclade Ib isolates, and may thus represent a distinct assemblage within group B. Although ITS subclade Ib included the P. indigoferae ex-type sequence, this group was considered to be P. vexans since South African isolates in this clade produced globose sporangia. Group C contained four apple isolates that were related to, but distinct from P. cucurbitacearum. Although P. vexans groups A-C might be distinct species, they are not described here as such due to (i) these groups only representing some of the known diversity in P. vexans, (ii) conflicting gene tree phylogenies preventing phylogenetic species identification, and (iii) sexually sterile isolates preventing the broad application of biometrical data.


Subject(s)
Crops, Agricultural/microbiology , Phylogeny , Pythium/classification , Pythium/isolation & purification , Biometry , DNA, Fungal/genetics , Fungal Proteins/genetics , Molecular Sequence Data , Pythium/chemistry , Pythium/genetics , South Africa , Spores, Fungal/chemistry , Spores, Fungal/classification , Spores, Fungal/genetics , Spores, Fungal/isolation & purification
16.
Biochemistry ; 49(18): 3879-86, 2010 May 11.
Article in English | MEDLINE | ID: mdl-20397628

ABSTRACT

We describe a condensing enzyme from Pythium irregulare (PirELO) that shows highest activity on the 18-carbon, Delta-6 desaturated fatty acids, stearidonic acid and gamma-linolenic acid. However, this enzyme is also capable of elongating a number of other fatty acids including the 20-carbon, Delta-5 desaturated fatty acid eicosapentaenoic acid. Surprisingly, a Phytophthora infestans condensing enzyme (PinELO) with very high homology to PirELO did not show activity with 20-carbon fatty acids. A series of chimeric proteins for these two enzymes were constructed to investigate the influence of different regions on substrate and product length. The substitution of a region from near the center of PirELO into PinELO resulted in an enzyme having EPA-elongating activity similar to that of PirELO. Only eight amino acids differed between the two proteins in this region; however, substitution of the same region from PinELO into PirELO produced a protein which was almost inactive. The addition of a small region from near the N-terminus of PinELO was sufficient to restore activity with GLA, indicating that amino acids from these two regions interact to determine protein structure or function. Predicted topology models for PirELO and PinELO placed the two regions described here near the luminal-proximal ends of the first and fourth/fifth transmembrane helixes, at the opposite end of the condensing enzyme from four conserved regions thought to form a catalytic ring. Thus, protein characteristics determined by specific luminal-proximal regions of fatty acid condensing enzymes have a major influence on substrate specificity and final product length.


Subject(s)
Acetyltransferases/chemistry , Algal Proteins/chemistry , Fatty Acids, Unsaturated/chemistry , Pythium/enzymology , Acetyltransferases/genetics , Acetyltransferases/isolation & purification , Acetyltransferases/metabolism , Algal Proteins/genetics , Algal Proteins/isolation & purification , Algal Proteins/metabolism , Amino Acid Motifs , Fatty Acid Elongases , Fatty Acids, Unsaturated/metabolism , Pythium/chemistry , Pythium/genetics , Substrate Specificity
17.
J Agric Food Chem ; 57(7): 2739-44, 2009 Apr 08.
Article in English | MEDLINE | ID: mdl-19265450

ABSTRACT

Crude glycerol is a major byproduct for the biodiesel industry. Producing value-added products through microbial fermentation on crude glycerol provides opportunities to utilize a large quantity of this byproduct. The objective of this study is to explore the potential of using crude glycerol for producing eicosapentaenoic acid (EPA, 20:5 n-3) by the fungus Pythium irregulare . When P. irregulare was grown in medium containing 30 g/L crude glycerol and 10 g/L yeast extract, EPA yield and productivity reached 90 mg/L and 14.9 mg/L x day, respectively. Adding pure vegetable oils (flaxseed oil and soybean oil) to the culture greatly enhanced the biomass and the EPA production. This enhancement was due to the oil absorption by the fungal cells and elongation of shorter chain fatty acids (e.g., linoleic acid and alpha-linolenic acid) into longer chain fatty acid (e.g., EPA). The major impurities contained in crude glycerol, soap and methanol, were inhibitory to fungal growth. Soap can be precipitated from the liquid medium through pH adjustment, whereas methanol can be evaporated from the medium during autoclaving. The glycerol-derived fungal biomass contained about 15% lipid, 36% protein, and 40% carbohydrate, with 9% ash. In addition to EPA, the fungal biomass was also rich in the essential amino acids lysine, arginine, and leucine, relative to many common feedstuffs. Elemental analysis by inductively coupled plasma showed that aluminum, calcium, copper, iron, magnesium, manganese, phosphorus, potassium, silicon, sodium, sulfur, and zinc were present in the biomass, whereas no heavy metals (such as mercury and lead) were detected. The results show that it is feasible to use crude glycerol for producing fungal biomass that can serve as EPA-fortified food or feed.


Subject(s)
Eicosapentaenoic Acid/biosynthesis , Glycerol/metabolism , Pythium/metabolism , Amino Acids/analysis , Carbohydrates/analysis , Fermentation , Linseed Oil/administration & dosage , Lipids/analysis , Proteins/analysis , Pythium/chemistry , Pythium/growth & development , Soaps/administration & dosage , Soaps/chemistry , Soybean Oil/administration & dosage
18.
Plant Cell Physiol ; 50(5): 924-34, 2009 May.
Article in English | MEDLINE | ID: mdl-19304739

ABSTRACT

The cell wall protein fraction (CWP) is purified from the non-pathogenic biocontrol agent Pythium oligandrum and is composed of two glycoproteins (POD-1 and POD-2), which are structurally similar to class III elicitins. In tomato plants treated with CWP, jasmonic acid (JA)- and ethylene (ET)-dependent signaling pathways are activated, and resistance to Ralstonia solanaceraum is enhanced. To dissect CWP-induced defense mechanisms, we investigated defense gene expression and resistance to bacterial pathogens in Arabidopsis thaliana ecotype Col-0 treated with CWP. When the leaves of Col-0 were infiltrated with CWP, neither visible necrosis nor salicylic acid (SA)-responsive gene (PR-1 and PR-5) expression was induced. In contrast, JA-responsive gene (PDF1.2 and JR2) expression was up-regulated and the resistance to R. solanaceraum and Pseudomonas syringae pv. tomato DC3000 was enhanced in response to CWP. Such CWP-induced defense responses were completely compromised in CWP-treated coi1-1 and jar1-1 mutants with an impaired JA signaling pathway. The induction of defense-related gene expression after CWP treatment was partially compromised in ET-insensitive ein2-1 mutants, but not in SA signaling mutants or nahG transgenic plants. Global gene expression analysis using cDNA array also suggested that several other JA- and ET-responsive genes, but not SA-responsive genes, were up-regulated in response to CWP. Further analysis of CWP-induced defense responses using another eight mutants with impaired defense signaling pathways indicated that, interestingly, the induction of JA-responsive gene expression and enhanced resistance to two bacterial pathogens in response to CWP were completely compromised in rar1-1, rar1-21, sgt1a-1, sgt1b (edm1) and npr1-1 mutants. Thus, the CWP-induced defense system appears to be regulated by JA-mediated and SGT1-, RAR1- and NPR1-dependent signaling pathways.


Subject(s)
Arabidopsis/metabolism , Cell Wall/chemistry , Pythium/chemistry , Signal Transduction , Arabidopsis/genetics , Arabidopsis/microbiology , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cyclopentanes/metabolism , Cyclopentanes/pharmacology , Ethylenes/metabolism , Ethylenes/pharmacology , Gene Expression Regulation, Plant , Genes, Plant , Glucosyltransferases/genetics , Glucosyltransferases/metabolism , Intracellular Signaling Peptides and Proteins , Nucleotidyltransferases/genetics , Nucleotidyltransferases/metabolism , Oligonucleotide Array Sequence Analysis , Oxylipins/metabolism , Oxylipins/pharmacology , Plant Diseases/genetics , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Plants, Genetically Modified/microbiology , Pseudomonas syringae/pathogenicity , RNA, Plant/metabolism , Ralstonia/pathogenicity , Salicylic Acid/metabolism , Salicylic Acid/pharmacology
19.
J Basic Microbiol ; 48(2): 71-81, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18383229

ABSTRACT

Pseudomonas jessenii isolate EC-S101, an antagonistic rhizobacterium, induces morphological abnormalities such as topical swelling and excessive lateral branching in phytopathogenic Peronosporomycetes Pythium aphanidermatum hyphae as a result of radial growth inhibition in a dual culture assay. Rhodamine-phalloidin staining revealed that these abnormalities were associated with disorganization of actin cytoskeleton. Both the morphological forms of actin, filaments and plaques, were affected progressively. At early stage of interaction (in less affected hyphae), the filaments were either eliminated or disarrayed. At advance stage of interaction (in severely affected hyphae), even the plaques population was decreased or disappeared. The effects of P. jessenii on actin architecture of Py. aphanidermatum were comparable to latrunculin B, a known actin assembly inhibitor. In addition, at early stage of interaction, the quantities of nuclei, lipid bodies and mitochondria became higher than those in control. At advance stage of interaction, the quantities of these organelles were almost similar, higher and lower, respectively, compare to those in control. Scanning electron microscopy exhibited cell wall disruption and accumulation of extracellular material associated with severely affected hyphae. Ultrastructural observations of the affected hyphae displayed additional features of considerable thickening of cell wall, enlargement of vacuoles, sinking of redundant lipid bodies into the enlarged vacuoles and wall appositions. We conclude that in addition to interference in morphogenesis and growth of Py. aphanidermatum, P. jessenii suppresses the pathogen through sub-cellular disorganization, specifically the actin architecture. This is the first report on disruption of cytoskeleton in a eukaryotic phytopathogen by an antagonistic rhizobacterium.


Subject(s)
Actins/metabolism , Antibiosis/physiology , Cytoskeleton/metabolism , Pseudomonas/physiology , Pythium/physiology , Hyphae/growth & development , Microscopy, Electron, Scanning , Plant Roots/microbiology , Plant Roots/ultrastructure , Pseudomonas/pathogenicity , Pythium/chemistry , Pythium/ultrastructure
20.
J Chem Ecol ; 31(4): 805-17, 2005 Apr.
Article in English | MEDLINE | ID: mdl-16124252

ABSTRACT

The potential protection of Picea glehnii seedlings from damping-off by seed-epiphytic Penicillium species was investigated. We studied the chemical response of seed-epiphytic Penicillium species (Pen. cyaneum, Pen. damascenum, and Pen. implicatum) to Pythium vexans, a damping-off fungus, in vitro. Penicillium species were cultured singly or cocultured with Pyt. vexans for 14 or 18 d, and mycelial growth, pH of culture filtrate, antifungal activity of the culture filtrate against Pyt. vexans, and the amount of antifungal compound produced by each Penicillium species, were examined. The filtrate of both the single culture of Penicillium and the coculture of Penicillium and Pyt. vexans showed antifungal activity against Pyt. vexans. In a coculture with Pyt. vexans, Pen. cyaneum produced an antifungal compound (patulin) as in the single culture. Pen. damascenum cocultured with Pyt. vexans produced an antifungal compound (citrinin), as it did in the single culture and in larger amounts on day 10. Pen. implicatum produced two antifungal compounds, frequentin and palitantin, and the ratio of frequentin (with higher antifungal activity than palitantin) to palitantin was higher in the coculture with Pyt. vexans than in the single culture. Our results indicate that these Penicillium species have the ability to produce antifungal compounds and to keep anti-fungal activity under competitive condition with Pyt. vexans. The chemical response of these Penicillium species to Pyt. vexans may contribute to protect P. glehnii seedlings from damage by Pyt. vexans.


Subject(s)
Antifungal Agents/pharmacology , Penicillium/metabolism , Pythium/physiology , Culture Media , Cyclohexanols/pharmacology , Cyclohexanones/pharmacology , Fungal Proteins/physiology , Patulin/pharmacology , Penicillins/pharmacology , Penicillium/classification , Pythium/chemistry , Soil Microbiology , Time Factors
SELECTION OF CITATIONS
SEARCH DETAIL
...